Citrus Sinensis ID: 044875

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------27
Protein Sequence
MSEGLKFMILLLSGLVGLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGIR
Secondary Structure (PSIPRED)
cccccEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEcccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccccccccccccHHHHHHHHHHcHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccHccccccccccEccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEcccccHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEcccccHHHEEEccccccEEEEEccccccccccHHHHHHEHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHcccccHHHHccccccccccHHHHHHHHHHHHHHccccHcccccHHHHHHHHHHccHHHcccccc
Coil and Loop (DISEMBL)
MSEGLKFMILLLSGLVGLVLVMSRLVINRLRKkrtltgsqsssrkDLLLNISYESLLKatggfssaniigagsfgsvckgildpdqtvvsvrdfkpctrlSIAIDVASALEYLhhhsekpivhcdskpsnilldndmtthveygmgnqfstngdvySYGKLLLEIFtgkrstsdmfteglglhnfvkmavpdqisevldplfvaggeeegekTAEENIKKGQIQESLITILKIRVVCsikspqermdtsdVVNNLQTVKSTLLRCGIR
Flexible Loop (DISEMBL)
MSEGLKFMILLLSGLVGLVLVMSRLVINrlrkkrtltgsqsssrkdlLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEgektaeenikkgqiqesLITILKIRVVCSIkspqermdtsdvvnnlqtvkstllrcgir
Low Complexity Region (SEG)
MSEGLKFMIlllsglvglvlvmsrlvINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVaggeeegektaeeNIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGIR
Disordered region (IsUnstruct)
****LKFMILLLSGLVGLVLVMSRLVINRLRK*************DLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG****************QIQESLITILKIRVVCSIK**************LQTV**TLL*****
Disordered Region (DISOPRED)
*SEGLKFMILLLSGLVGLVLVMSRLVIN*****************DLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGI*
Disordered Region (DISEMBL)
MSEGLKFMILLLSGLVGLVLVMSRLVINRLRKK*********SRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG**********NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGIR
Disordered Region (DISPRO)
*SEGLKFMILLLSGLVGLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK*********
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSEGLKFMILLLSGLVGLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGIR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	268	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	no	no	0.582	0.154	0.359	3e-29
Q9SD62	1025	Putative receptor-like pr	no	no	0.626	0.163	0.361	8e-29
C0LGT6	1031	LRR receptor-like serine/	no	no	0.563	0.146	0.357	5e-28
Q9ZUI0	980	Putative leucine-rich rep	no	no	0.783	0.214	0.278	2e-27
Q9FII5	1041	Leucine-rich repeat recep	no	no	0.593	0.152	0.318	3e-16
Q9M0G7	1013	Leucine-rich repeat recep	no	no	0.544	0.144	0.290	3e-16
Q9FZ59	1088	Leucine-rich repeat recep	no	no	0.563	0.138	0.279	4e-16
Q9SSL9	1123	Leucine-rich repeat recep	no	no	0.828	0.197	0.257	8e-16
Q9LYN8	1192	Leucine-rich repeat recep	no	no	0.533	0.119	0.300	1e-13
Q9SYM9	355	Receptor-like serine/thre	no	no	0.559	0.422	0.310	2e-12

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score =  129 bits (323), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 107/203 (52%), Gaps = 47/203 (23%)

Query: 99   RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV----------------- 141
            RL+IAIDVAS L+YLH H  +PI HCD KPSN+LLD+D+T HV                 
Sbjct: 813  RLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNVLLDDDLTAHVSDFGLARLLLKFDEESF 872

Query: 142  ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH 183
                              EYG+G Q S NGDVYS+G LLLE+FTGKR T+++F     L+
Sbjct: 873  FNQLSSAGVRGTIGYAAPEYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLN 932

Query: 184  NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG-QIQESLITILKIRVVCSIKSP 242
            ++ K A+P++I +++D           E      ++ G  + E L  + ++ + C  +SP
Sbjct: 933  SYTKSALPERILDIVD-----------ESILHIGLRVGFPVVECLTMVFEVGLRCCEESP 981

Query: 243  QERMDTSDVVNNLQTVKSTLLRC 265
              R+ TS VV  L +++    + 
Sbjct: 982  MNRLATSIVVKELISIRERFFKA 1004

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score =  127 bits (319), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 110/227 (48%), Gaps = 59/227 (25%)

Query: 82   LDPDQ---TVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
            L PD+   T    R      RL+IAIDVASAL YLH +   PI HCD KPSNILLD D+T
Sbjct: 810  LHPDEIEETGNPSRTLGLFARLNIAIDVASALVYLHTYCHNPIAHCDIKPSNILLDKDLT 869

Query: 139  THV-----------------------------------EYGMGNQFSTNGDVYSYGKLLL 163
             HV                                   EYGMG   S  GDVYS+G +LL
Sbjct: 870  AHVSDFGLAQLLLKFDRDTFHIQFSSAGVRGTIGYAAPEYGMGGHPSIMGDVYSFGIVLL 929

Query: 164  EIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG-- 221
            EIFTGKR T+ +F +GL LH+F K A+  Q  + LD               +E I +G  
Sbjct: 930  EIFTGKRPTNKLFVDGLTLHSFTKSAL--QKRQALD-------------ITDETILRGAY 974

Query: 222  ----QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR 264
                 + E L  + ++ V CS +SP  R+  ++ ++ L +++ +  R
Sbjct: 975  AQHFNMVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFR 1021

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score =  124 bits (312), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 99/207 (47%), Gaps = 56/207 (27%)

Query: 92   RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            R   P  +L+IAIDVASALEYLH H   P+ HCD KPSNILLD+D+T HV          
Sbjct: 816  RSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLY 875

Query: 142  -------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMF 176
                                     EYGMG Q S  GDVYS+G LLLE+F+GK+ T + F
Sbjct: 876  KYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESF 935

Query: 177  TEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVV 236
                 LH++ K         +L     +GG                I E L  +L++ + 
Sbjct: 936  AGDYNLHSYTK--------SILSGCTSSGGSN-------------AIDEGLRLVLQVGIK 974

Query: 237  CSIKSPQERMDTSDVVNNLQTVKSTLL 263
            CS + P++RM T + V  L +++S   
Sbjct: 975  CSEEYPRDRMRTDEAVRELISIRSKFF 1001

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1

 Score =  122 bits (306), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 138/320 (43%), Gaps = 110/320 (34%)

Query: 51  ISYESLLKATGGFSSANIIGAGSFGSVCKG-----------ILDPDQTVVSVRDFK---- 95
           ISY+ L+ ATGGF+++++IG+G FG V KG           +LDP   +     FK    
Sbjct: 649 ISYQQLIAATGGFNASSLIGSGRFGHVYKGVLRNNTKVAVKVLDPKTALEFSGSFKRECQ 708

Query: 96  ---------------PCTR-----------------------------------LSIAID 105
                           C++                                   ++I  D
Sbjct: 709 ILKRTRHRNLIRIITTCSKPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNICSD 768

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------------------ 141
           VA  + YLHH+S   +VHCD KPSNILLD++MT  V                        
Sbjct: 769 VAEGIAYLHHYSPVKVVHCDLKPSNILLDDEMTALVTDFGISRLVQGVEETVSTDDSVSF 828

Query: 142 ----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF 185
                           EYGMG + ST+GDVYS+G LLLEI +G+R T  +  EG  LH F
Sbjct: 829 GSTDGLLCGSVGYIAPEYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEF 888

Query: 186 VKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQER 245
           +K   PD +  +++   ++  + +G+    E + +    E ++ ++++ +VC+  +P  R
Sbjct: 889 MKSHYPDSLEGIIEQA-LSRWKPQGKPEKCEKLWR----EVILEMIELGLVCTQYNPSTR 943

Query: 246 MDTSDVVNNLQTVKSTLLRC 265
            D  DV + +  +K  L  C
Sbjct: 944 PDMLDVAHEMGRLKEYLFAC 963

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FII5|TDR_ARATH Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana GN=TDR PE=1 SV=1

 Score = 85.9 bits (211), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 93/204 (45%), Gaps = 45/204 (22%)

Query: 85   DQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV--- 141
            D+T+ +  ++    +  IAI VA  + YLHH  +  IVH D KPSNILLD D    V   
Sbjct: 814  DKTMTAAAEWTALYQ--IAIGVAQGICYLHHDCDPVIVHRDLKPSNILLDADFEARVADF 871

Query: 142  ------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT 177
                                    EY    Q     D+YSYG +LLEI TGKRS    F 
Sbjct: 872  GVAKLIQTDESMSVVAGSYGYIAPEYAYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFG 931

Query: 178  EGLGLHNFV--KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRV 235
            EG  + ++V  K+   + + EVLD       +  G   +        I+E +  +L+I +
Sbjct: 932  EGNSIVDWVRSKLKTKEDVEEVLD-------KSMGRSCS-------LIREEMKQMLRIAL 977

Query: 236  VCSIKSPQERMDTSDVVNNLQTVK 259
            +C+ +SP +R    DV+  LQ  K
Sbjct: 978  LCTSRSPTDRPPMRDVLLILQEAK 1001

Acts with CLE41p and CLE44p peptides as a ligand-receptor pair in a signal transduction pathway involved in the regulation of procambium maintenance and polarity during vascular-tissue development. Mediates repression of tracheary element differentiation and the promotion of procambial cells formation and polar division adjacent to phloem cells in the veins.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M0G7|PXL2_ARATH Leucine-rich repeat receptor-like protein kinase PXL2 OS=Arabidopsis thaliana GN=PXL2 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 47/193 (24%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------- 141
           +R +IA+ VA  L YLHH    P++H D K +NILLD ++   +                
Sbjct: 804 SRYNIALGVAHGLAYLHHDCHPPVIHRDIKSNNILLDANLDARIADFGLARMMARKKETV 863

Query: 142 ------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA 189
                       EYG   +     D+YSYG +LLE+ TG+R     F E + +  +V+  
Sbjct: 864 SMVAGSYGYIAPEYGYTLKVDEKIDIYSYGVVLLELLTGRRPLEPEFGESVDIVEWVRRK 923

Query: 190 VPDQIS--EVLDPLFVAGGEEEGEKTAEENIKKGQ-IQESLITILKIRVVCSIKSPQERM 246
           + D IS  E LDP                N+   + +QE ++ +L+I ++C+ K P++R 
Sbjct: 924 IRDNISLEEALDP----------------NVGNCRYVQEEMLLVLQIALLCTTKLPKDRP 967

Query: 247 DTSDVVNNLQTVK 259
              DV++ L   K
Sbjct: 968 SMRDVISMLGEAK 980

Involved in the regulation of procambium maintenance and polarity during vascular-tissue development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZ59|PEPR2_ARATH Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 46/197 (23%)

Query: 98   TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------- 146
             R +IA+ ++  L YLHH    PI+H D KP NIL+D+DM  H+ ++G+           
Sbjct: 894  ARFNIALGISHGLAYLHHDCHPPIIHRDIKPENILMDSDMEPHIGDFGLARILDDSTVST 953

Query: 147  -------------NQFST----NGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA 189
                         N + T      DVYSYG +LLE+ TGKR+    F E + + ++V+  
Sbjct: 954  ATVTGTTGYIAPENAYKTVRSKESDVYSYGVVLLELVTGKRALDRSFPEDINIVSWVRSV 1013

Query: 190  VP------DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQ 243
            +       D    ++DP  V            + +   +++E  I +  + + C+ K P+
Sbjct: 1014 LSSYEDEDDTAGPIVDPKLV------------DELLDTKLREQAIQVTDLALRCTDKRPE 1061

Query: 244  ERMDTSDVVNNLQTVKS 260
             R    DVV +L  ++S
Sbjct: 1062 NRPSMRDVVKDLTDLES 1078

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SSL9|PEPR1_ARATH Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 61/283 (21%)

Query: 26   VINRLRKKRTLTGSQSSSRK-DLLLNISYESLLKATG-------GFSSANIIGAGSFGSV 77
             + RL     +  +QS  R+ D +  + + +L+K  G       G      +  GS   V
Sbjct: 853  AVKRLVFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDV 912

Query: 78   CKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
              G+  P + V+   D+    R ++A+ VA  L YLH+    PIVH D KP NIL+D+D+
Sbjct: 913  LHGV-SPKENVL---DWS--ARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDL 966

Query: 138  TTHV-EYGMG-----------------------NQFST----NGDVYSYGKLLLEIFTGK 169
              H+ ++G+                        N F T      DVYSYG +LLE+ T K
Sbjct: 967  EPHIGDFGLARLLDDSTVSTATVTGTTGYIAPENAFKTVRGRESDVYSYGVVLLELVTRK 1026

Query: 170  RSTSDMFTEGLGLHNFVKMA-------VPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQ 222
            R+    F E   + ++V+ A       V D ++ ++DP+ V            + +    
Sbjct: 1027 RAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILV------------DELLDSS 1074

Query: 223  IQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRC 265
            ++E ++ + ++ + C+ + P  R    D V  L+ VK     C
Sbjct: 1075 LREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDVKHLARSC 1117

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1

 Score = 77.4 bits (189), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/193 (30%), Positives = 85/193 (44%), Gaps = 50/193 (25%)

Query: 99   RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV----------------- 141
            RL IA+  A  L +LHH     I+H D K SNILLD D    V                 
Sbjct: 1017 RLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVS 1076

Query: 142  ------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA 189
                        EYG   + +T GDVYS+G +LLE+ TGK  T   F E  G  N V  A
Sbjct: 1077 TVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEG-GNLVGWA 1135

Query: 190  VPD----QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQER 245
            +      +  +V+DPL V+                  ++ S + +L+I ++C  ++P +R
Sbjct: 1136 IQKINQGKAVDVIDPLLVSVA----------------LKNSQLRLLQIAMLCLAETPAKR 1179

Query: 246  MDTSDVVNNLQTV 258
             +  DV+  L+ +
Sbjct: 1180 PNMLDVLKALKEI 1192

Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SYM9|Y1853_ARATH Receptor-like serine/threonine-protein kinase At1g78530 OS=Arabidopsis thaliana GN=At1g78530 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/193 (31%), Positives = 86/193 (44%), Gaps = 43/193 (22%)

Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM----------------TTH 140
            +R  IA+  A  + YLHH     I+H D K SNILLD++M                 TH
Sbjct: 169 ASRYRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDHNMEARVSDFGLATLMEPDKTH 228

Query: 141 V-------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSD-MFTEGLGLHNFV 186
           V             EY    + +  GDVYS+G +LLE+ TG++ T D  F EG  L  +V
Sbjct: 229 VSTFVAGTFGYLAPEYFDTGKATMKGDVYSFGVVLLELLTGRKPTDDEFFEEGTKLVTWV 288

Query: 187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM 246
           K  V DQ  EV+    + G       + +EN       E +  +  I ++C    P  R 
Sbjct: 289 KGVVRDQREEVVIDNRLRGS------SVQEN-------EEMNDVFGIAMMCLEPEPAIRP 335

Query: 247 DTSDVVNNLQTVK 259
             ++VV  L+ +K
Sbjct: 336 AMTEVVKLLEYIK 348

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
255575910	688	serine-threonine protein kinase, plant-t	0.873	0.340	0.447	2e-54
255575904	834	serine-threonine protein kinase, plant-t	0.854	0.274	0.437	1e-52
147853780	1904	hypothetical protein VITISV_030954 [Viti	0.731	0.102	0.444	2e-48
359482058	1040	PREDICTED: probable LRR receptor-like se	0.731	0.188	0.440	3e-48
224090977	1034	predicted protein [Populus trichocarpa]	0.869	0.225	0.428	9e-48
255586722	936	serine-threonine protein kinase, plant-t	0.708	0.202	0.434	6e-43
125538616	1151	hypothetical protein OsI_06370 [Oryza sa	0.932	0.217	0.332	5e-42
224127492	1022	predicted protein [Populus trichocarpa]	0.626	0.164	0.465	6e-41
224097748	1032	predicted protein [Populus trichocarpa]	0.652	0.169	0.423	8e-41
359486510	965	PREDICTED: probable LRR receptor-like se	0.660	0.183	0.417	3e-40

>gi|255575910|ref|XP_002528852.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223531703|gb|EEF33526.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  218 bits (555), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/286 (44%), Positives = 167/286 (58%), Gaps = 52/286 (18%)

Query: 17  GLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGS 76
           G  LV++ L + R RK +    + SSS +  LL +SY+SLLKAT GFSS N+IG+G FGS
Sbjct: 401 GAGLVLACLFLWRSRKSKG--DATSSSFEKELLRLSYQSLLKATNGFSSDNLIGSGGFGS 458

Query: 77  VCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           V KGILD D             RL+IAIDVA ALEYLH+HS  PIVHCD KPSN+LLD +
Sbjct: 459 VYKGILDQDGL-----------RLNIAIDVACALEYLHYHSGTPIVHCDLKPSNVLLDGE 507

Query: 137 MTTHV-----------------------------------EYGMGNQFSTNGDVYSYGKL 161
           MT HV                                   EYG+G+  ST+GD++S+G L
Sbjct: 508 MTGHVSDFGLVKFLQDGKIDFSANHSSSVEARGTIGYCPPEYGLGSNISTSGDIFSFGIL 567

Query: 162 LLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE----N 217
           LLE+FTGKR T +MFTEGL LHNFV  A+P+Q+ +++DP  +     E   +       N
Sbjct: 568 LLEMFTGKRPTDEMFTEGLSLHNFVNRALPEQVIKIIDPNMLGMQLSEDATSNHHRNLMN 627

Query: 218 IKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL 263
            +K ++ E L  I +I + CS +SPQERM   DVV  L +V++  L
Sbjct: 628 RRKDKLMECLTPIFEIGLSCSTESPQERMKIGDVVAQLSSVRNRFL 673

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575904|ref|XP_002528849.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223531700|gb|EEF33523.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/281 (43%), Positives = 167/281 (59%), Gaps = 52/281 (18%)

Query: 11  LLSGLVGLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIG 70
           L  G++   LV++ L I RLRK +    S SSS ++ LL +SY++LLKAT GFSS N+IG
Sbjct: 563 LCGGILAAALVLTCLSIWRLRKSKR--ESTSSSFENALLRLSYQNLLKATNGFSSDNLIG 620

Query: 71  AGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSN 130
           +G FG                      TRL+IAIDVA ALEYLH HS   IVHCD KPSN
Sbjct: 621 SGGFG----------------------TRLNIAIDVACALEYLHCHSGTTIVHCDPKPSN 658

Query: 131 ILLDNDMTTH------------------------VEYGMGNQFSTNGDVYSYGKLLLEIF 166
           +LLD +M+ H                         EYG+G+  ST+GD++S+G LLLE+F
Sbjct: 659 LLLDKEMSGHDGNIDFCTNQSNSVGARGTIGYCPPEYGLGSNISTSGDIFSFGILLLEMF 718

Query: 167 TGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE----NIKKGQ 222
           TGKR T DMFTEGL LHNFVK A+P+Q+++++DP  +     E   +  +    N +K +
Sbjct: 719 TGKRPTHDMFTEGLSLHNFVKGALPEQVTKIIDPCMLRVQLSEDATSNHQRDMRNRRKDK 778

Query: 223 IQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL 263
           + E L  I +I + CS +SPQERM+ SDV+  L +V++  L
Sbjct: 779 LIECLTPIFEIGISCSAESPQERMNISDVLAQLSSVRNRFL 819

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147853780|emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/236 (44%), Positives = 141/236 (59%), Gaps = 40/236 (16%)

Query: 72   GSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI 131
            GS  +    +  PD+    +R      RL+IAIDVASAL+YLHHH  KPIVHCD KPSNI
Sbjct: 829  GSLENWLHPVPTPDEINDVLRILSLPQRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNI 888

Query: 132  LLDNDMTTHV-----------------------------------EYGMGNQFSTNGDVY 156
            LLDNDMT HV                                   EYGMG + S  GD Y
Sbjct: 889  LLDNDMTAHVGDFGLARFIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTY 948

Query: 157  SYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE 216
            SYG LLLE+FTGKR T  MF++ L LHNFVKMA+P++I++++DP F++   +E E TA +
Sbjct: 949  SYGILLLEMFTGKRPTESMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAAD 1008

Query: 217  -----NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGI 267
                 ++K+ ++ E LI+IL+I V CS++SP+ERM  ++ +  LQ ++  LL  GI
Sbjct: 1009 SSNLAHMKREKMHECLISILRIGVSCSLESPRERMAITEAIKELQLIRKILLGNGI 1064

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482058|ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 104/236 (44%), Positives = 141/236 (59%), Gaps = 40/236 (16%)

Query: 72   GSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI 131
            GS  +    +  PD+    +R      RL+IAIDVASAL+YLHHH  KPIVHCD KPSNI
Sbjct: 798  GSLENWLHPVPTPDEINDVLRILSLPQRLNIAIDVASALDYLHHHCHKPIVHCDLKPSNI 857

Query: 132  LLDNDMTTHV-----------------------------------EYGMGNQFSTNGDVY 156
            LLDNDMT HV                                   EYGMG + S  GD Y
Sbjct: 858  LLDNDMTAHVGDFGLARFIPEAAGRSHPSQSSSIGLKGTIGYAAPEYGMGTKVSALGDTY 917

Query: 157  SYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE 216
            SYG LLLE+FTGKR T  MF++ L LHNFVKMA+P++I++++DP F++   +E E TA +
Sbjct: 918  SYGILLLEMFTGKRPTESMFSDQLNLHNFVKMALPERIADIIDPFFLSSEAKEEETTAAD 977

Query: 217  -----NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCGI 267
                 ++K+ ++ E LI+IL+I V CS++SP+ERM  ++ +  LQ ++  LL  G+
Sbjct: 978  SSNLAHMKREKMHECLISILRIGVSCSLESPRERMAITEAIKELQLIRKILLGNGV 1033

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224090977|ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1| predicted protein [Populus trichocarpa]

 Score =  196 bits (498), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 125/292 (42%), Positives = 161/292 (55%), Gaps = 59/292 (20%)

Query: 30   LRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVV 89
            +R+++TL    +    ++L NI + +L+K     SS +  G   F ++    + P+ T+ 
Sbjct: 745  MRQRKTLKSFMAEC--EILKNIRHRNLVKILTACSSVDFQG-NDFKALVYEFM-PNGTLE 800

Query: 90   SVRDFKPCT--------------RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN 135
            S     P T              RL+IAIDVA+AL YLH+   KP+VHCD KPSN+LLDN
Sbjct: 801  SWLHSFPRTNGINEDLKILSFHQRLNIAIDVAAALNYLHYQCHKPVVHCDLKPSNVLLDN 860

Query: 136  DMTTHV-----------------------------------EYGMGNQFSTNGDVYSYGK 160
            DMT HV                                   EYGMG++ S NGDVYSYG 
Sbjct: 861  DMTAHVGDFGLARFIEEAINPSHRNESSSVGLKGTVGYAAPEYGMGSKPSMNGDVYSYGI 920

Query: 161  LLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG------EKTA 214
            LLLE+FTGKR T DMF +GL LHNFVK A+PDQISEV+DPLFV GGE +       E   
Sbjct: 921  LLLEMFTGKRPTDDMFHDGLDLHNFVKTALPDQISEVVDPLFVTGGEGDEEETGHLENRT 980

Query: 215  EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCG 266
               IKK Q+QESLI IL+I + CS++S  ER +  DV+  LQ V+   L  G
Sbjct: 981  RGQIKKDQMQESLIAILRIGIACSVESINERKNVKDVLTELQNVRRFFLGSG 1032

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586722|ref|XP_002533985.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223526036|gb|EEF28405.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  180 bits (456), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/221 (43%), Positives = 126/221 (57%), Gaps = 31/221 (14%)

Query: 75  GSVCKGILDPDQT-VVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL 133
           GS+ + +  PD+   +   +     RL+IA+DVA AL+YLH+H E PI+HCD KPSNILL
Sbjct: 715 GSLEEWLHPPDEAKAIPRNNLNILQRLNIAVDVACALDYLHNHCETPIIHCDLKPSNILL 774

Query: 134 DNDMTTHV------------------------------EYGMGNQFSTNGDVYSYGKLLL 163
           DN+MT HV                              EYG GN+ ST+GDVYSYG LLL
Sbjct: 775 DNEMTGHVGDFGLAKFYRERSHQSSSIGIRGSLGYAPAEYGTGNEVSTSGDVYSYGILLL 834

Query: 164 EIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQI 223
           EIFTGKR   D F E + LHN+VK A+P+Q+ E+LDP     GE         N    + 
Sbjct: 835 EIFTGKRPMDDWFNEDVSLHNYVKNALPEQVVEILDPTLFQEGEGGISLIRRSNASINRT 894

Query: 224 QESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR 264
            E LI+I +I V CS ++P ERM+  DV   L ++++ LLR
Sbjct: 895 MECLISICEIGVACSAETPGERMNICDVAGQLVSIRNKLLR 935

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125538616|gb|EAY85011.1| hypothetical protein OsI_06370 [Oryza sativa Indica Group]

 Score =  177 bits (448), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 167/346 (48%), Gaps = 96/346 (27%)

Query: 9    ILLLSGLVGLVLVMSRLVINRLRKKRTLTGSQSSSRKDLLLNISYESLLKATGGFSSANI 68
            I + S ++ + +V +  V+++ R K+T    Q+S  K+  + +SY  L +AT GF+S N+
Sbjct: 778  ISICSTVLFMAVVATSFVLHK-RAKKTNANRQTSLIKEQHMRVSYTELAEATNGFASENL 836

Query: 69   IGAGSFGSVCKGIL--DPDQTVVSV--------------------------------RDF 94
            IGAGSFGSV KG +  +  Q  V+V                                RDF
Sbjct: 837  IGAGSFGSVYKGSMRINDQQVAVAVKVFNLKQRGSSKSFAAECETLRCVRHRNLVKGRDF 896

Query: 95   KPC------------------------------TRLSIAIDVASALEYLHHHSEKPIVHC 124
            K                                TRL IAIDVAS+LEYLH +   PI+HC
Sbjct: 897  KAIVYKFLPNRNLDQWLHQNIMENGEHKALDLITRLEIAIDVASSLEYLHQYKPSPIIHC 956

Query: 125  DSKPSNILLDNDMTTHV-------------------------------EYGMGNQFSTNG 153
            D KPSN+LLD++M  HV                               EYG+GN+ S  G
Sbjct: 957  DLKPSNVLLDDEMVAHVGDFGLARFLHQDPEQSSGWASMRGTIGYAAPEYGLGNEVSIYG 1016

Query: 154  DVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT 213
            DVYSYG LLLE+F+GKR T   F E LGLH +V MA+PD+++ V+D   +   E+   +T
Sbjct: 1017 DVYSYGILLLEMFSGKRPTDSKFGESLGLHKYVNMALPDRVASVIDLSLLEETEDGEART 1076

Query: 214  AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK 259
            +  N  +      + +IL + V CS+++P +R+   D +  LQ ++
Sbjct: 1077 SISNQTREMRIACITSILHVGVSCSVETPTDRVPIGDALKELQRIR 1122

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127492|ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (439), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/204 (46%), Positives = 122/204 (59%), Gaps = 36/204 (17%)

Query: 99   RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV----------------- 141
            RL+IAI +ASAL YLHH  + PI+HCD KPSNILLD +MT HV                 
Sbjct: 820  RLNIAIHMASALNYLHHDCQMPIIHCDLKPSNILLDTNMTAHVGDFGLARFHSEASNQTS 879

Query: 142  -------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM 188
                         EYG+G + ST GDVYSYG LLLE+FTGKR    MF +GL LH++ KM
Sbjct: 880  SVGLKGTIGYAAPEYGIGGKVSTYGDVYSYGILLLEMFTGKRPVDGMFKDGLNLHSYAKM 939

Query: 189  AVPDQISEVLDPLFVAGGEEEGEKTAEE----NIKKGQIQESLITILKIRVVCSIKSPQE 244
            A+PD+I EV+DPL V   E     +++E    +I   +I   L+TI+K+ V CS++ P+E
Sbjct: 940  ALPDRIVEVVDPLLVR--EIRSVNSSDEMGMYHIGPHEISACLMTIIKMGVACSVELPRE 997

Query: 245  RMDTSDVVNNLQTVKSTLLRCGIR 268
            RMD  DVV  L  +K TLL   +R
Sbjct: 998  RMDIGDVVTELNRIKDTLLGTRMR 1021

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224097748|ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (438), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/215 (42%), Positives = 123/215 (57%), Gaps = 40/215 (18%)

Query: 92   RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            RD     RL+IAIDVASAL+YLH+H +  +VHCD KPSN+LLD D+T HV          
Sbjct: 811  RDLSLLQRLNIAIDVASALDYLHNHCQIAVVHCDLKPSNVLLDGDLTAHVGDFGLARLLT 870

Query: 142  -------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMF 176
                                     EYGMG++ ST GDVYSYG LLLE+FTGKR T  MF
Sbjct: 871  QASHQPGLDQTSSIGLKGTIGYAAPEYGMGSEVSTFGDVYSYGILLLEMFTGKRPTDTMF 930

Query: 177  TEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG-----QIQESLITIL 231
             + + LHNF KMA P++++E+LDP  V   EE     A  +  +      +I E L+ I+
Sbjct: 931  KDEMNLHNFAKMASPNRVTEILDPALVREAEETSADHASTSSARNHNGTEKIMECLVLII 990

Query: 232  KIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRCG 266
            K+ V C+++SP+ER+D S+V   L  ++  L+  G
Sbjct: 991  KVGVACAVESPRERIDISNVATELYRIRKILIGTG 1025

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359486510|ref|XP_002271317.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like, partial [Vitis vinifera]

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/213 (41%), Positives = 120/213 (56%), Gaps = 36/213 (16%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           R      RL+IAIDVA AL+YLHH  + PIVHCD KPSN+LLD +MT HV          
Sbjct: 743 RKLNFLQRLNIAIDVACALDYLHHQCQTPIVHCDLKPSNVLLDTEMTGHVGDFGIAKFLP 802

Query: 142 -------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMF 176
                                    EYGMG++ ST+GDVYS+G LLLE+FTGKR T DMF
Sbjct: 803 EAATRVPEIQSSSIGIRGTIGYAAPEYGMGSEVSTSGDVYSFGILLLEMFTGKRPTEDMF 862

Query: 177 TEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQ-IQESLITILKIRV 235
            + L +HNFVK AVP++++E+ DP+ +  G E    T++  +      QE LI+I  I +
Sbjct: 863 KDSLNIHNFVKTAVPERVAEIADPVLLQEGVEMDNTTSQRRMASSHDAQECLISIFGIGL 922

Query: 236 VCSIKSPQERMDTSDVVNNLQTVKSTLLRCGIR 268
            CS + P+ER + +D    L +V+   L  G+ 
Sbjct: 923 ACSAELPRERKNITDAAAELNSVRDIFLGTGLH 955

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	268
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.417	0.110	0.346	1.6e-38
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.417	0.110	0.338	4.8e-28
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.444	0.116	0.330	6e-28
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.425	0.111	0.357	2.1e-27
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.626	0.162	0.331	2.1e-26
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.261	0.069	0.52	3e-26
TAIR|locus:2047525	980	AT2G24130 [Arabidopsis thalian	0.444	0.121	0.330	1.1e-23
TAIR|locus:2127323	642	CRK27 "cysteine-rich RLK (RECE	0.190	0.079	0.461	6e-17
TAIR|locus:2170483	1173	FLS2 "FLAGELLIN-SENSITIVE 2" [	0.171	0.039	0.468	9.7e-15
TAIR|locus:2154563	470	CRCK1 "calmodulin-binding rece	0.194	0.110	0.490	3.3e-14

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 1.6e-38, Sum P(3) = 1.6e-38
 Identities = 43/124 (34%), Positives = 71/124 (57%)

Query:   142 EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL 201
             EYGMG Q S +GDVYS+G LLLE+FTGKR T ++F   L LH++ K+A+P+++ E+ D  
Sbjct:   892 EYGMGGQPSIHGDVYSFGVLLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKA 951

Query:   202 FVXXXXXXXXXXXXXNIKKG-QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS 260
              +              ++ G +  E L  +L++ + C  + P  R+ TS+V   L +++ 
Sbjct:   952 ILHI-----------GLRVGFRTAECLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRE 1000

Query:   261 TLLR 264
                +
Sbjct:  1001 RFFK 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 4.8e-28, Sum P(2) = 4.8e-28
 Identities = 42/124 (33%), Positives = 71/124 (57%)

Query:   142 EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL 201
             EYG+G Q S NGDVYS+G LLLE+FTGKR T+++F     L+++ K A+P++I +++D  
Sbjct:   891 EYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDES 950

Query:   202 FVXXXXXXXXXXXXXNIKKG-QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS 260
              +              ++ G  + E L  + ++ + C  +SP  R+ TS VV  L +++ 
Sbjct:   951 ILHI-----------GLRVGFPVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRE 999

Query:   261 TLLR 264
                +
Sbjct:  1000 RFFK 1003

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 197 (74.4 bits), Expect = 6.0e-28, Sum P(2) = 6.0e-28
 Identities = 40/121 (33%), Positives = 67/121 (55%)

Query:   142 EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL 201
             EYG+G   ST+GD+YSYG L+LEI TGKR T   F   LGL  +V++ +  ++++V+D  
Sbjct:   893 EYGVGLIASTHGDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTK 952

Query:   202 FVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST 261
              +               ++  I E ++ +L++ + CS + P  R  T D+++ L  +K  
Sbjct:   953 LILDSENWLNSTNNSPCRR--ITECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQN 1010

Query:   262 L 262
             L
Sbjct:  1011 L 1011

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 183 (69.5 bits), Expect = 2.1e-27, Sum P(2) = 2.1e-27
 Identities = 44/123 (35%), Positives = 66/123 (53%)

Query:   142 EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL 201
             EYGMG   S  GDVYS+G +LLEIFTGKR T+ +F +GL LH+F K A+  Q  + LD  
Sbjct:   908 EYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSAL--QKRQALD-- 963

Query:   202 FVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST 261
                            N+      E L  + ++ V CS +SP  R+  ++ ++ L +++ +
Sbjct:   964 ITDETILRGAYAQHFNMV-----ECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRES 1018

Query:   262 LLR 264
               R
Sbjct:  1019 FFR 1021

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 2.1e-26, Sum P(2) = 2.1e-26
 Identities = 61/184 (33%), Positives = 90/184 (48%)

Query:    92 RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
             R   P  +L+IAIDVASALEYLH H   P+ HCD KPSNILLD+D+T HV ++G+     
Sbjct:   816 RSLTPAEKLNIAIDVASALEYLHVHCHDPVAHCDIKPSNILLDDDLTAHVSDFGLAQLLY 875

Query:   147 --------NQFSTNGDVYSYGKLLLEIFTGKRST--SDMFTEGLGLHNFVKMAVPDQISE 196
                     NQFS+ G   + G    E   G + +   D+++ G+ L        P   S 
Sbjct:   876 KYDRESFLNQFSSAGVRGTIGYAAPEYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESF 935

Query:   197 VLDPLFVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ 256
               D   +             +     I E L  +L++ + CS + P++RM T + V  L 
Sbjct:   936 AGD-YNLHSYTKSILSGCTSSGGSNAIDEGLRLVLQVGIKCSEEYPRDRMRTDEAVRELI 994

Query:   257 TVKS 260
             +++S
Sbjct:   995 SIRS 998

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.0e-26, Sum P(2) = 3.0e-26
 Identities = 39/75 (52%), Positives = 51/75 (68%)

Query:    75 GSVCKGILDPDQTVVSVRDFKPCT---RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI 131
             GS+ K  L P++     R  +  T   RL+IAIDVAS L+YLH H  +PI HCD KPSNI
Sbjct:   786 GSLDKW-LHPEEVEEIHRPSRTLTLLERLNIAIDVASVLDYLHVHCHEPIAHCDLKPSNI 844

Query:   132 LLDNDMTTHV-EYGM 145
             LLD+D+T HV ++G+
Sbjct:   845 LLDDDLTAHVSDFGL 859

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.1e-23, Sum P(2) = 1.1e-23
 Identities = 41/124 (33%), Positives = 66/124 (53%)

Query:   142 EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL 201
             EYGMG + ST+GDVYS+G LLLEI +G+R T  +  EG  LH F+K   PD +  +++  
Sbjct:   845 EYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQA 904

Query:   202 FVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST 261
                              +K   +E ++ ++++ +VC+  +P  R D  DV + +  +K  
Sbjct:   905 L----SRWKPQGKPEKCEK-LWREVILEMIELGLVCTQYNPSTRPDMLDVAHEMGRLKEY 959

Query:   262 LLRC 265
             L  C
Sbjct:   960 LFAC 963

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2127323 CRK27 "cysteine-rich RLK (RECEPTOR-like protein kinase) 27" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
 Identities = 24/52 (46%), Positives = 32/52 (61%)

Query:    99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQF 149
             R +I + V+  L YLH  SE PI+H D K SN+LLD  M   + ++GM  QF
Sbjct:   432 RYNIIVGVSRGLLYLHEGSEFPIIHRDLKSSNVLLDEQMLPKISDFGMARQF 483

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2170483 FLS2 "FLAGELLIN-SENSITIVE 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15
 Identities = 22/47 (46%), Positives = 33/47 (70%)

Query:    99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG 144
             ++ + + +AS ++YLH     PIVHCD KP+NILLD+D   HV ++G
Sbjct:   971 KIDLCVHIASGIDYLHSGYGFPIVHCDLKPANILLDSDRVAHVSDFG 1017

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0016020 "membrane" evidence=ISS;IDA

GO:0016045 "detection of bacterium" evidence=IMP

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042742 "defense response to bacterium" evidence=RCA;IMP

GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0016310 "phosphorylation" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0006898 "receptor-mediated endocytosis" evidence=IDA

TAIR|locus:2154563 CRCK1 "calmodulin-binding receptor-like cytoplasmic kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 3.3e-14, Sum P(3) = 3.3e-14
 Identities = 26/53 (49%), Positives = 34/53 (64%)

Query:    99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFS 150
             RL IAIDVA AL YLH +++ PI+H D K SNIL+ N +   V ++G     S
Sbjct:   247 RLEIAIDVAHALTYLHTYTDSPIIHRDIKASNILITNKLRAKVADFGFARLVS 299

GO:0005886 "plasma membrane" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=IDA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0042542 "response to hydrogen peroxide" evidence=IEP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	268
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	9e-09
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-08
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-08
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	1e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	1e-07
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	6e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-05
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	3e-05
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	3e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	4e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	6e-05
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	8e-05
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	2e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-04
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	5e-04
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-04
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	7e-04
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	8e-04
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	8e-04
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.001
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.001
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	0.002
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	0.002
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.002
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	0.002
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	0.003
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.003
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	0.003
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	0.004

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 54.6 bits (132), Expect = 9e-09
 Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 32/105 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                   IA+ +   LEYLH +    I+H D KP NILLD +    +            
Sbjct: 95  LSEDEAKKIALQILRGLEYLHSNG---IIHRDLKPENILLDENGVVKIADFGLAKKLLKS 151

Query: 142 -----------EY------GMGNQFSTNGDVYSYGKLLLEIFTGK 169
                       Y        GN +    DV+S G +L E+ TGK
Sbjct: 152 SSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGK 196

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.9 bits (125), Expect = 4e-08
 Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 33/98 (33%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--------------------- 136
             L I + +   LEYLH +    I+H D KP NILLD+D                     
Sbjct: 93  EILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSL 149

Query: 137 MTTHV--------EYGMGNQ-FSTNGDVYSYGKLLLEI 165
           + T V        E  +G   +S   D++S G +L E+
Sbjct: 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.8 bits (125), Expect = 7e-08
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 38/115 (33%)

Query: 83  DPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV- 141
            P+++ +S++D      LS AI +A  +EYL     K  VH D    N L+  D+   + 
Sbjct: 96  SPEKSTLSLKDL-----LSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKIS 147

Query: 142 EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT 167
           ++G+                                F++  DV+S+G LL EIFT
Sbjct: 148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 51.8 bits (125), Expect = 7e-08
 Identities = 24/99 (24%), Positives = 37/99 (37%), Gaps = 32/99 (32%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------THVEYGM 145
             LS A+ +A  +EYL     K  +H D    N L+  ++                +Y  
Sbjct: 103 DLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYR 159

Query: 146 G-----------------NQFSTNGDVYSYGKLLLEIFT 167
                              +F++  DV+S+G LL EIFT
Sbjct: 160 KRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 26/114 (22%), Positives = 40/114 (35%), Gaps = 37/114 (32%)

Query: 83  DPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---- 138
                 +S+ D      LS A+ +A  +EYL     K  +H D    N L+  ++     
Sbjct: 94  KNRPKELSLSDL-----LSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKIS 145

Query: 139 --------THVEYGMGNQ-----------------FSTNGDVYSYGKLLLEIFT 167
                      +Y                      F++  DV+S+G LL EIFT
Sbjct: 146 DFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 30/103 (29%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---------THVEYG 144
                       + SALEYLH      IVH D KP NILLD D             ++ G
Sbjct: 94  LSEDEARFYLRQILSALEYLHSKG---IVHRDLKPENILLDEDGHVKLADFGLARQLDPG 150

Query: 145 ------------------MGNQFSTNGDVYSYGKLLLEIFTGK 169
                             +G  +    D++S G +L E+ TGK
Sbjct: 151 EKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGK 193

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 51.4 bits (124), Expect = 1e-07
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 37/103 (35%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCD--SKPSNILLDNDMTTHV-------------E 142
             L +A+ +A  +EYL     K  VH D  ++  N L+  ++   +              
Sbjct: 103 DLLQMALQIAKGMEYLE---SKNFVHRDLAAR--NCLVTENLVVKISDFGLSRDIYEDDY 157

Query: 143 YGMG-----------------NQFSTNGDVYSYGKLLLEIFTG 168
           Y                     +F++  DV+S+G LL EIFT 
Sbjct: 158 YRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTL 200

Length = 258

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 48.9 bits (117), Expect = 6e-07
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 28/98 (28%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------- 146
            +L  A+DV   +EYL    EK  VH D    N+L+  D+   V ++G+           
Sbjct: 103 QQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSG 159

Query: 147 --------------NQFSTNGDVYSYGKLLLEIFTGKR 170
                          +FST  DV+S+G LL EI++  R
Sbjct: 160 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 46.8 bits (112), Expect = 3e-06
 Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 33/98 (33%)

Query: 103 AIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---------------------MTTHV 141
              +   L YLH      IVH D K +NIL+D+D                      T  V
Sbjct: 107 TRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSV 163

Query: 142 ---------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                    E   G ++    D++S G  ++E+ TGK 
Sbjct: 164 RGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP 201

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 23/43 (53%), Positives = 26/43 (60%), Gaps = 4/43 (9%)

Query: 96  PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
            CTR   A ++  ALEYLH    K I+H D KP NILLD DM 
Sbjct: 102 KCTRFYAA-EILLALEYLH---SKGIIHRDLKPENILLDKDMH 140

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 4/44 (9%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
            +  I  ++  ALEYLH    K I+H D KP NILLD     H+
Sbjct: 102 VKFWIC-EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHI 141

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 43.7 bits (104), Expect = 3e-05
 Identities = 30/104 (28%), Positives = 39/104 (37%), Gaps = 36/104 (34%)

Query: 96  PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------- 141
              R   A ++  ALEYLH      I++ D KP NILLD D   H+              
Sbjct: 93  ERARFYAA-EIVLALEYLHSLG---IIYRDLKPENILLDADG--HIKLTDFGLAKELSSE 146

Query: 142 ----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                           E  +G  +    D +S G LL E+ TGK
Sbjct: 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGK 190

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 43.8 bits (103), Expect = 3e-05
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH-VEYGMGNQFSTNGDVYSYG 159
           +I  D+ + LEY+H H    I H D KP NI++D +   + ++YG+ + F  +G    Y 
Sbjct: 130 NIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYS 186

Query: 160 K 160
           K
Sbjct: 187 K 187

Length = 294

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 43.8 bits (103), Expect = 4e-05
 Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 28/97 (28%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           L  ++DVA  +EYL     K +VH D    NIL+  D    V ++G+             
Sbjct: 103 LQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKL 159

Query: 147 ------------NQFSTNGDVYSYGKLLLEIFTGKRS 171
                        +FS+  DV+SYG LL E+F+  R+
Sbjct: 160 PVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRA 196

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 30/96 (31%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---------TTHVEYGM------- 145
           IA  +   L+YLH   ++ I+H D KPSN+L+++           +  +E  +       
Sbjct: 104 IARQILKGLDYLHT--KRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV 161

Query: 146 ------------GNQFSTNGDVYSYGKLLLEIFTGK 169
                       G  +S   D++S G  LLE   GK
Sbjct: 162 GTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 42.6 bits (101), Expect = 8e-05
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 3/28 (10%)

Query: 109 ALEYLHHHSEKPIVHCDSKPSNILLDND 136
           ALEYLH +    I+H D KP NIL+D++
Sbjct: 105 ALEYLHSNG---IIHRDLKPDNILIDSN 129

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 41.8 bits (99), Expect = 2e-04
 Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 33/92 (35%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDN---------------------DMTTHV----- 141
             L+YLH +    I+H D K SNIL++N                     D T  V     
Sbjct: 111 EGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWY 167

Query: 142 ---EYGMG-NQFSTNGDVYSYGKLLLEIFTGK 169
              E  +G  ++    D++S G +L E+F GK
Sbjct: 168 RPPELLLGATRYGPEVDMWSVGCILAELFLGK 199

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 41.3 bits (97), Expect = 3e-04
 Identities = 29/90 (32%), Positives = 35/90 (38%), Gaps = 29/90 (32%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-------------------DMT-THV 141
           IA  V   L YLH    + I+H D KPSNILL                       T T  
Sbjct: 110 IAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGT 166

Query: 142 EYGM------GNQFSTNGDVYSYGKLLLEI 165
            + M      G  +S   DV+S G  LLE+
Sbjct: 167 SFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILL-DNDMTTHVEYGMGNQFSTNGDVYS 157
           +I + +  AL YLH   EK IVH D  P+NI+L ++D  T  ++G+  Q      + S
Sbjct: 117 NIFVQMVLALRYLH--KEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTS 172

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 28/94 (29%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-----------------NDMT-THV-- 141
           IA+ V   L YLH   +  I+H D KPSNIL++                 N +  T V  
Sbjct: 105 IAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGT 162

Query: 142 ------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                 E   GN +S   D++S G  L+E+ TG+
Sbjct: 163 SSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 40.6 bits (96), Expect = 5e-04
 Identities = 18/34 (52%), Positives = 21/34 (61%), Gaps = 3/34 (8%)

Query: 103 AIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           A  V  ALEYLH      IV+ D KP N+LLD+D
Sbjct: 107 AAQVVLALEYLHS---LDIVYRDLKPENLLLDSD 137

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 40.4 bits (95), Expect = 5e-04
 Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 14/86 (16%)

Query: 72  GSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI 131
           G+   + +     D+ V+ V            + +   L YLH H    IVH D KP+NI
Sbjct: 84  GTLEELLEHGRILDEHVIRV----------YTLQLLEGLAYLHSHG---IVHRDIKPANI 130

Query: 132 LLD-NDMTTHVEYGMGNQFSTNGDVY 156
            LD N +    ++G   +   N    
Sbjct: 131 FLDHNGVIKLGDFGCAVKLKNNTTTM 156

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 40.2 bits (95), Expect = 6e-04
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           L   + +  AL+YLH    + I+H D KP NI L ++
Sbjct: 106 LDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSN 139

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 40.5 bits (93), Expect = 6e-04
 Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
                 L I   + SALEYLH    K I+H D KP NILLD D
Sbjct: 98  LSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRD 137

Length = 384

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 40.1 bits (94), Expect = 6e-04
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 42/123 (34%)

Query: 90  SVRDFKPCTR--------LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----- 136
           S+RD+    R        L  +  +   ++YL     +  +H D    NIL++++     
Sbjct: 94  SLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKI 150

Query: 137 --------MTTHVEYGMGNQ------------------FSTNGDVYSYGKLLLEIFTGKR 170
                   +    +Y    +                  FS+  DV+S+G  L E+FT   
Sbjct: 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210

Query: 171 STS 173
            + 
Sbjct: 211 PSQ 213

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 39.7 bits (93), Expect = 7e-04
 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 3/47 (6%)

Query: 90  SVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +   F   T L  A ++  ALEYLH      IV+ D KP NILLD +
Sbjct: 94  NSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKE 137

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 39.7 bits (93), Expect = 8e-04
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 33/99 (33%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-----------------NDMTTHVEYG 144
           IA+ +  ALEYLH  S+  ++H D KPSN+L++                 + +   ++ G
Sbjct: 108 IAVSIVKALEYLH--SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTIDAG 165

Query: 145 ----M--------GNQ--FSTNGDVYSYGKLLLEIFTGK 169
               M         NQ  +    DV+S G  ++E+ TG+
Sbjct: 166 CKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGR 204

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 40.0 bits (93), Expect = 8e-04
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 32/109 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---------------- 135
           R+   C  L+I   V  A++YLH +    I+H D K  NI +++                
Sbjct: 177 RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPV 233

Query: 136 DMTTHVEYGMGNQFSTNG-------------DVYSYGKLLLEIFTGKRS 171
           D+  +  YG     +TN              D++S G +L E+ T   S
Sbjct: 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDS 282

Length = 391

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 38/191 (19%)

Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTN------ 152
           R  IAI +A AL +LH      +V  +  P  I++D     H+   +     T+      
Sbjct: 782 RRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFIS 841

Query: 153 -----------------GDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QI 194
                             D+Y +G +L+E+ TGK      F     +  + +    D  +
Sbjct: 842 SAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901

Query: 195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN 254
              +DP              + ++ + +I E +   L     C+   P  R   +DV+  
Sbjct: 902 DMWIDPSI----------RGDVSVNQNEIVEVMNLALH----CTATDPTARPCANDVLKT 947

Query: 255 LQTVKSTLLRC 265
           L++   +   C
Sbjct: 948 LESASRSSSSC 958

Length = 968

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 39.4 bits (92), Expect = 0.001
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 33/99 (33%)

Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------- 146
           +L IA  VA+ + YL   SE+  VH D    N L+  +M   + ++G+            
Sbjct: 132 QLCIAKQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 188

Query: 147 ------------------NQFSTNGDVYSYGKLLLEIFT 167
                             N+++T  DV++YG +L EIF+
Sbjct: 189 SENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 227

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 39.0 bits (92), Expect = 0.002
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           SI   +   L Y H H    I+H D KP NIL++ D  
Sbjct: 102 SIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGV 136

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 34/129 (26%), Positives = 49/129 (37%), Gaps = 45/129 (34%)

Query: 69  IGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKP 128
           +GA S     K  LD         DF     L IAI +A+ +EYL  H     VH D   
Sbjct: 108 VGAESGDETVKSSLDCS-------DF-----LHIAIQIAAGMEYLSSHH---FVHRDLAA 152

Query: 129 SNIL-------------LDNDMTTHVEYGMGNQ-----------------FSTNGDVYSY 158
            N L             L  D+ +   Y + ++                 F+T  D++S+
Sbjct: 153 RNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSF 212

Query: 159 GKLLLEIFT 167
           G +L EIF+
Sbjct: 213 GVVLWEIFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 3/34 (8%)

Query: 103 AIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           A ++ASAL YLH      I++ D KP NILLD+ 
Sbjct: 102 AAEIASALGYLH---SLNIIYRDLKPENILLDSQ 132

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.5 bits (89), Expect = 0.002
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 35/118 (29%)

Query: 80  GILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT 139
           G  D D+TV S    +P   + I   +A+ +E+L  H    +VH D    N+L+ + +  
Sbjct: 109 GSTDDDKTVKST--LEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNV 163

Query: 140 HVE--------YG------MGN----------------QFSTNGDVYSYGKLLLEIFT 167
            +         Y       MGN                +FS + D++SYG +L E+F+
Sbjct: 164 KISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFS 221

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 31/96 (32%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           + +A  VA  + YL    E+  +H D    NIL+  D+   V ++G+             
Sbjct: 107 IDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSD 163

Query: 147 ---------------NQFSTNGDVYSYGKLLLEIFT 167
                            FST  DV+S+G LL E+FT
Sbjct: 164 KKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 38.0 bits (88), Expect = 0.003
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 28/96 (29%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQ---------- 148
           L  ++DV  A+EYL  ++    VH D    N+L+  D    V ++G+  +          
Sbjct: 105 LKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKL 161

Query: 149 --------------FSTNGDVYSYGKLLLEIFTGKR 170
                         FST  DV+S+G LL EI++  R
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR 197

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 38.3 bits (89), Expect = 0.003
 Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 34/161 (21%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDN-------DMTTHVEYGMGNQFSTNGDVYSY 158
           + S LE+LH      I++ D KP N+LLDN       D+   VE   G Q  T G   + 
Sbjct: 106 IISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDG-QSKTKGYAGTP 161

Query: 159 GKLLLEIFTGKRS--TSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE 216
           G +  E+  G+    + D F  G+ L+  +    P          F A     GEK   +
Sbjct: 162 GFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGP----------FRA----RGEKVENK 207

Query: 217 NIKKGQIQESLITILKI----RVVCSI---KSPQERMDTSD 250
            +K+  + +S+    K     +  C     K P++R+   D
Sbjct: 208 ELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRD 248

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 38.0 bits (89), Expect = 0.003
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 30/95 (31%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-----------------MTTHVEYG 144
           +  ++   LEYLH      I+H D K +NILL +D                    +   G
Sbjct: 103 VCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVG 159

Query: 145 ----------MGNQFSTNGDVYSYGKLLLEIFTGK 169
                      G  +    D++S G   +E+  GK
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLGITAIELAEGK 194

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 37.9 bits (88), Expect = 0.004
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDN 135
           +VA AL+YLH H    I+H D KP N+L+ N
Sbjct: 112 EVALALDYLHRHG---IIHRDLKPDNMLISN 139

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 37.6 bits (87), Expect = 0.004
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVY 156
           T +   ID+AS +EYL   S K  +H D    N +L+ +MT  V ++G+  +  + GD Y
Sbjct: 114 TLVRFMIDIASGMEYL---SSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYS-GDYY 169

Query: 157 SYG 159
             G
Sbjct: 170 RQG 172

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	268
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.96
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.96
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.96
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.96
KOG3653	534	consensus Transforming growth factor beta/activin	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.96
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.95
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.95
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.95
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.95
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.95
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
PHA02988	283	hypothetical protein; Provisional	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.94
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.94
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.94
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.94
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.93
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.93
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.93
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.93
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.93
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.93
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.93
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.93
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.93
PTZ00284	467	protein kinase; Provisional	99.93
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.93
PTZ00283	496	serine/threonine protein kinase; Provisional	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.93
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
PTZ00036	440	glycogen synthase kinase; Provisional	99.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.93
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.93
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.93
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.92
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.92
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.92
KOG0198	313	consensus MEKK and related serine/threonine protei	99.92
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.92
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.92
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.92
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.92
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.92
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.92
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.92
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.92
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.92
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.92
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.92
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.92
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.92
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.92
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.92
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.92
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.92
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.92
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.92
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.92
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.92
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.92
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.92
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.92
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.92
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.92
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.92
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.92
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.92
PHA03209	357	serine/threonine kinase US3; Provisional	99.92
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.92
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.92
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.92
KOG0578	550	consensus p21-activated serine/threonine protein k	99.92
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.92
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.92
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.92
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.92
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.91
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.91
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.91
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.91
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.91
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.91
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.91
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.91
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.91
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.91
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.91
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.91
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.91
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.91
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.91
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.91
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.91
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.91
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.91
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.91
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.91
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.91
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.91
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.91
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.91
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.91
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.91
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.91
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.91
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.91
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.91
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.91
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.91
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.91
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.91
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.91
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.91
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.91
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.91
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.91
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.91
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.91
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.91
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.91
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.91
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.9
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.9
PHA03211	461	serine/threonine kinase US3; Provisional	99.9
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.9
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.9
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.9
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.9
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.9
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.9
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.9
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.9
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.9
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.9
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.9
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.9
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.9
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.9
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.9
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.9
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.9
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.9
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.9
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.9
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.9
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.9
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.9
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.9
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.9
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.9
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.9
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.9
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.9
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.9
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.9
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.9
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.9
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.9
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.9
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.9
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.9
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.9
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.9
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.9
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.9
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.9
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.9
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.9
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.9
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.9
PHA03207	392	serine/threonine kinase US3; Provisional	99.89
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.89
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.89
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.89
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.89
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.89
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.89
PTZ00267	478	NIMA-related protein kinase; Provisional	99.89
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.89
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.89
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.89
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.89
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.89
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.89
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.89
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.89
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.89
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.89
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.89
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.89
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.89
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.89
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.89
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.89
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.89
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.89
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.89
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.89
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.89
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.89
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.89
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.89
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.89
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.89
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.89
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.89
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.89
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.89
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.89
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.89
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.89
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.89
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.89
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.88
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.88
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.88
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.88
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.88
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.88
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.88
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.88
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.88
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.88
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.88
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.88
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.88
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.88
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.88
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.88
KOG0605	550	consensus NDR and related serine/threonine kinases	99.88
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.88
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.88
PLN00009	294	cyclin-dependent kinase A; Provisional	99.88
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.87
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.87
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.87
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.87
KOG0584	632	consensus Serine/threonine protein kinase [General	99.87
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.87
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.87
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.87
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.87
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.87
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.87
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.87
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.87
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.87
KOG0589	426	consensus Serine/threonine protein kinase [General	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.86
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.86
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.86
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.86
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.86
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.86
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.86
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.86
PHA03210	501	serine/threonine kinase US3; Provisional	99.86
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.86
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.85
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.85
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.85
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.85
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.85
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.84
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.83
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.83
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.83
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.83
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.83
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.82
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.82
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.82
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.82
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.82
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.82
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.82
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.8
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.8
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.79
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.79
KOG0610	459	consensus Putative serine/threonine protein kinase	99.79
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.79
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.79
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.78
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.78
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.78
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.76
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.75
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.75
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.74
KOG0586	596	consensus Serine/threonine protein kinase [General	99.74
PLN00181	793	protein SPA1-RELATED; Provisional	99.73
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.73
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.73
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.72
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.72
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.71
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.68
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.66
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.66
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.63
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.6
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.59
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.55
KOG1152	772	consensus Signal transduction serine/threonine kin	99.52
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.52
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.51
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.5
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.43
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.37
PRK09188	365	serine/threonine protein kinase; Provisional	99.36
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.35
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.3
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.24
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.22
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.21
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.2
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.17
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.15
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.08
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.08
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.03
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	98.97
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.97
smart00090	237	RIO RIO-like kinase.	98.88
PRK14879	211	serine/threonine protein kinase; Provisional	98.88
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.87
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.78
PRK12274	218	serine/threonine protein kinase; Provisional	98.72
KOG1266	458	consensus Protein kinase [Signal transduction mech	98.66
PRK10345	210	hypothetical protein; Provisional	98.58
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.58
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.42
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.39
COG4248	637	Uncharacterized protein with protein kinase and he	98.28
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.27
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.98
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.95
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.87
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.85
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.85
KOG3087	229	consensus Serine/threonine protein kinase [General	97.7
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.67
KOG2137	700	consensus Protein kinase [Signal transduction mech	97.44
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.17
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.8
COG0661	517	AarF Predicted unusual protein kinase [General fun	96.74
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	96.71
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.26
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.8
KOG1243	690	consensus Protein kinase [General function predict	95.54
PRK09902	216	hypothetical protein; Provisional	95.43
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	95.39
PF02439	38	Adeno_E3_CR2: Adenovirus E3 region protein CR2; In	95.14
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	95.1
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	94.99
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	94.37
PF15102	146	TMEM154: TMEM154 protein family	94.1
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	93.95
PF08693	40	SKG6: Transmembrane alpha-helix domain; InterPro:	93.74
KOG1235	538	consensus Predicted unusual protein kinase [Genera	92.82
PF01102	122	Glycophorin_A: Glycophorin A; InterPro: IPR001195	92.53
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	92.52
PF03109	119	ABC1: ABC1 family; InterPro: IPR004147 This entry	92.24
PF15050	133	SCIMP: SCIMP protein	91.56
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	89.24
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	89.21
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	88.95
KOG4258	1025	consensus Insulin/growth factor receptor (contains	87.8
PF14575	75	EphA2_TM: Ephrin type-A receptor 2 transmembrane d	86.84
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	86.67
PF08374	221	Protocadherin: Protocadherin; InterPro: IPR013585	86.26
PF05454	290	DAG1: Dystroglycan (Dystrophin-associated glycopro	86.26
KOG1236	565	consensus Predicted unusual protein kinase [Genera	85.43
KOG1093	725	consensus Predicted protein kinase (contains TBC a	83.6
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	83.53
PF01034	64	Syndecan: Syndecan domain; InterPro: IPR001050 The	82.99
PF15069	143	FAM163: FAM163 family	80.99

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-38  Score=267.36  Aligned_cols=198  Identities=36%  Similarity=0.631  Sum_probs=165.2

Q ss_pred             cccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec--------------------------------
Q 044875           47 LLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF--------------------------------   94 (268)
Q Consensus        47 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l--------------------------------   94 (268)
                      ....|+|.++..||++|+..+.||+|+||.||+|.++ ++..||||++                                
T Consensus        61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy  139 (361)
T KOG1187|consen   61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY  139 (361)
T ss_pred             CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence            5667999999999999999999999999999999998 5589999932                                


Q ss_pred             --------------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           95 --------------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        95 --------------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                      +|..|++|+.++|+||+|||+...++|+|||||++|||+|+++.+|+ 
T Consensus       140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls  219 (361)
T KOG1187|consen  140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS  219 (361)
T ss_pred             EecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence                                            23458899999999999999998889999999999999999999999 


Q ss_pred             eeccC----------------------------CCcCccccEeechHHHHHHHhCCCCCCccc-ccccchhhHhhhhCcc
Q 044875          142 EYGMG----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMF-TEGLGLHNFVKMAVPD  192 (268)
Q Consensus       142 e~~~~----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~-~~~~~~~~~~~~~~~~  192 (268)
                      |||++                            +..+.|+||||||++++|++||++|.+... .....+..|.......
T Consensus       220 DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~  299 (361)
T KOG1187|consen  220 DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE  299 (361)
T ss_pred             CccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence            55421                            235779999999999999999999888543 3344577777655544


Q ss_pred             -chhhhcchhhhc-CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          193 -QISEVLDPLFVA-GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       193 -~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                       .+.+++|+.+.. ....               ..+..++..++..|++.+|..||+|.+|+.+|+.+..
T Consensus       300 ~~~~eiiD~~l~~~~~~~---------------~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  300 GKLREIVDPRLKEGEYPD---------------EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             cchhheeCCCccCCCCCh---------------HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence             789999998863 2221               1578889999999999999999999999999966543

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-34  Score=252.24  Aligned_cols=179  Identities=26%  Similarity=0.484  Sum_probs=145.3

Q ss_pred             ccCHHHHHHHhCCC---------CcCCcccCCCcceEEEEEecCCC---eEEEEeecCc---------------------
Q 044875           50 NISYESLLKATGGF---------SSANIIGAGSFGSVCKGILDPDQ---TVVSVRDFKP---------------------   96 (268)
Q Consensus        50 ~~~~~~l~~~~~~f---------~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~l~~---------------------   96 (268)
                      .++|+|-..|-..|         .++++||.|.||.||+|++...+   ..||||.|+.                     
T Consensus       609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd  688 (996)
T KOG0196|consen  609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD  688 (996)
T ss_pred             CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence            35677666555444         46788999999999999996554   5799995543                     


Q ss_pred             ------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC
Q 044875           97 ------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD  134 (268)
Q Consensus        97 ------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~  134 (268)
                                                                .+..-++++||.|+.||.+.+   .+||||.++|||++
T Consensus       689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVN  765 (996)
T KOG0196|consen  689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVN  765 (996)
T ss_pred             CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeec
Confidence                                                      456788999999999999999   99999999999999


Q ss_pred             CCCceee-eeccC------------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccch
Q 044875          135 NDMTTHV-EYGMG------------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGL  182 (268)
Q Consensus       135 ~~~~~~i-e~~~~------------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~  182 (268)
                      .+..+|+ |||++                              +++|++|||||||+++||+++ |++||.++.+++.  
T Consensus       766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV--  843 (996)
T KOG0196|consen  766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV--  843 (996)
T ss_pred             cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH--
Confidence            9999998 56654                              458899999999999999998 9999997654321  


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .                            +-+++.++...+.+|+..+++||++|||.|-.+||.|.+|+..|+++..+
T Consensus       844 I----------------------------kaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  844 I----------------------------KAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             H----------------------------HHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            1                            12233344444569999999999999999999999999999999998743

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=238.49  Aligned_cols=162  Identities=26%  Similarity=0.477  Sum_probs=131.5

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .+.||+|-||.||.|.+. ....||+|.+.+                                                 
T Consensus       211 ~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl  289 (468)
T KOG0197|consen  211 IRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLL  289 (468)
T ss_pred             HHHhcCCccceEEEEEEc-CCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHH
Confidence            377999999999999996 445788883332                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------  146 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------  146 (268)
                                   ...+.++.|||+|++||++++   +|||||.++|||++++..+|+ |||++                
T Consensus       290 ~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kf  366 (468)
T KOG0197|consen  290 DYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKF  366 (468)
T ss_pred             HHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCC
Confidence                         456889999999999999998   999999999999999999999 67765                


Q ss_pred             ------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 ------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 ------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +.|+.||||||||+++||++| |+.||+.+....  +.+.+                           
T Consensus       367 PIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~e--v~~~l---------------------------  417 (468)
T KOG0197|consen  367 PIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEE--VLELL---------------------------  417 (468)
T ss_pred             CceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHH--HHHHH---------------------------
Confidence                        458899999999999999999 999998653321  11111                           


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                       +.+.+-..+..|+.+++++|..||+.+|++||||+.+...|+.+...
T Consensus       418 -e~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  418 -ERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             -hccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence             11222223348899999999999999999999999999998887654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=8.4e-32  Score=258.30  Aligned_cols=190  Identities=22%  Similarity=0.402  Sum_probs=146.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ...|...+.||+|+||.||+|....++..||+|.+..                                           
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g  768 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGK  768 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCC
Confidence            3457778899999999999999977899999994422                                           


Q ss_pred             -----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-----------------------e
Q 044875           97 -----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-----------------------E  142 (268)
Q Consensus        97 -----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-----------------------e  142 (268)
                                 ..+.+++.++++|++|||+.+++.++|||+||+||+++.+...++                       |
T Consensus       769 ~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE  848 (968)
T PLN00113        769 NLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPE  848 (968)
T ss_pred             cHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcc
Confidence                       456789999999999999765566999999999999998776554                       3


Q ss_pred             eccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-chhhhcchhhhcCCCccchhhhHHhhhhh
Q 044875          143 YGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QISEVLDPLFVAGGEEEGEKTAEENIKKG  221 (268)
Q Consensus       143 ~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  221 (268)
                      +..+..++.++||||||+++||+++|+.|++........+..|....... ....++|+.+.....              
T Consensus       849 ~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  914 (968)
T PLN00113        849 TRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS--------------  914 (968)
T ss_pred             cccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC--------------
Confidence            33345688999999999999999999999975544445566666544332 344555655433211              


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          222 QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       222 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      ...++..++.+++.+||+.||++||+|++|++.|+++.+...
T Consensus       915 ~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~~  956 (968)
T PLN00113        915 VNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRSSS  956 (968)
T ss_pred             ccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcccc
Confidence            112566778999999999999999999999999999876543

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-33  Score=239.44  Aligned_cols=177  Identities=25%  Similarity=0.378  Sum_probs=137.0

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------   96 (268)
                      .+++....+.+.....||+|+||+||+|.+..   .||||.|..                                    
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP  460 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC
Confidence            34555555666677889999999999999974   499995544                                    


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 ...+.|++|+++|+.|||.++   |+|||||+.||++.++...+| |||+.  
T Consensus       461 ~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  461 PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceee
Confidence                                       356789999999999999999   999999999999999988888 55543  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                    .+|+..+||||||+++|||++|.-||.....+.  +..++..++.     
T Consensus       538 k~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dq--IifmVGrG~l-----  610 (678)
T KOG0193|consen  538 KTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQ--IIFMVGRGYL-----  610 (678)
T ss_pred             eeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhh--eEEEeccccc-----
Confidence                                          568999999999999999999999998432222  2222222210     


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                        .+.+..                 ...++++++.+|+..||..++++||.+.+|+.+|+++...
T Consensus       611 --~pd~s~-----------------~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  611 --MPDLSK-----------------IRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             --Cccchh-----------------hhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence              111111                 1127788899999999999999999999999998888763

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.97  E-value=5.4e-32  Score=229.24  Aligned_cols=167  Identities=30%  Similarity=0.486  Sum_probs=130.5

Q ss_pred             cCCcccCCCcceEEEEEecCCCeE-EEEeecCc-----------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQTV-VSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~~-vavK~l~~-----------------------------------------------   96 (268)
                      ....+|+|+||+||+|.+.  |+. ||+|.+..                                               
T Consensus        45 ~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~  122 (362)
T KOG0192|consen   45 IEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM  122 (362)
T ss_pred             hhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence            3456999999999999995  566 99995442                                               


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eecc----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGM----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~----------  145 (268)
                                         ..++.++.|||+||.|||+.++  |+|||||++|+|++.++ +.|+ |||.          
T Consensus       123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~  200 (362)
T KOG0192|consen  123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTS  200 (362)
T ss_pred             CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccccc
Confidence                               3468999999999999999774  99999999999999997 8888 3332          


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         ...|+.|+||||||+++||++||+.||.+... .......+.....+.++           
T Consensus       201 ~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p-----------  268 (362)
T KOG0192|consen  201 MTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIP-----------  268 (362)
T ss_pred             ccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCC-----------
Confidence                               23699999999999999999999999987544 22122222122111111           


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                       .++...+..++.+||+.||+.||++.+++..|+.+......
T Consensus       269 -----------------~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  269 -----------------KECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             -----------------ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence                             14566789999999999999999999999999999887654

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.1e-31  Score=238.67  Aligned_cols=168  Identities=24%  Similarity=0.449  Sum_probs=134.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~~---------------------------------------   96 (268)
                      .+....+.||+|.||.||+|+..+     +.+.||||.++.                                       
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            444556789999999999998842     346899994443                                       


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .+.+.|+.|||.|+.||.+..   ++||||..+|+|+.++...
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V  642 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV  642 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence                                                 356889999999999999988   9999999999999999999


Q ss_pred             ee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhh
Q 044875          140 HV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       140 ~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~  188 (268)
                      || |||++                             ++||++||||||||++||+++ |+.||.+..+++.  .+.+..
T Consensus       643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV--Ie~i~~  720 (774)
T KOG1026|consen  643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV--IECIRA  720 (774)
T ss_pred             EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH--HHHHHc
Confidence            99 44433                             679999999999999999999 9999987544321  111111


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                         +        .+                 ...+.+|+.++++||..||+.+|.+||+|+||-.+|+..-+.
T Consensus       721 ---g--------~l-----------------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  721 ---G--------QL-----------------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             ---C--------Cc-----------------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence               1        11                 112238999999999999999999999999999999987654

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.96  E-value=3.3e-30  Score=205.02  Aligned_cols=184  Identities=17%  Similarity=0.307  Sum_probs=129.1

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|....++|+|+||.|||++..++|+.||||.|.+                                             
T Consensus         3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~   82 (396)
T KOG0593|consen    3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEY   82 (396)
T ss_pred             HHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeee
Confidence            45556789999999999999999999999996654                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        ....+++.|++.|+.|+|.++   ++||||||+|||++.++..|+ |||++           
T Consensus        83 ~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT  159 (396)
T KOG0593|consen   83 CDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT  159 (396)
T ss_pred             cchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCcchhh
Confidence                              345789999999999999998   999999999999999988888 55543           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh--hhCccchhhhcc--hhhhcC
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK--MAVPDQISEVLD--PLFVAG  205 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~d--~~~~~~  205 (268)
                                       .+|+.++||||.||++.|+++|.+-|++..+-+. +.....  ....++...++.  +...+.
T Consensus       160 DYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ-Ly~I~ktLG~L~prhq~iF~~N~~F~Gv  238 (396)
T KOG0593|consen  160 DYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ-LYLIRKTLGNLIPRHQSIFSSNPFFHGV  238 (396)
T ss_pred             hhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH-HHHHHHHHcccCHHHHHHhccCCceeee
Confidence                             4688999999999999999999998886433221 111111  111222222221  111110


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                      .   .+...+.--..........-+++++..|++.||++|++.++++
T Consensus       239 ~---lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  239 R---LPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             e---cCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            0   0000000011111123344689999999999999999999988

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-29  Score=224.28  Aligned_cols=164  Identities=21%  Similarity=0.457  Sum_probs=129.4

Q ss_pred             cCCcccCCCcceEEEEEecCCCe----EEEEeecCc--------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~--------------------------------------------   96 (268)
                      ...+||+|+||+||||.+-+.|+    +||+|++..                                            
T Consensus       700 k~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~m  779 (1177)
T KOG1025|consen  700 KDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLM  779 (1177)
T ss_pred             hhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhc
Confidence            35789999999999999966665    577774432                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        ...+.++.|||+||.|||+..   ++||||.++|||+.+....++ +|+.+           
T Consensus       780 P~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~  856 (1177)
T KOG1025|consen  780 PLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS  856 (1177)
T ss_pred             ccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccccccc
Confidence                              456899999999999999887   999999999999998877777 34432           


Q ss_pred             ------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        .+|+.++|||||||.+||++| |.+||++...+.              +++++..       
T Consensus       857 ~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dlle~-------  915 (1177)
T KOG1025|consen  857 APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLLEK-------  915 (1177)
T ss_pred             ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHHhc-------
Confidence                              568999999999999999999 999998743321              1122111       


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                               +-+..++..|..+++.++..||..|+..||+|+++.+...++-+.
T Consensus       916 ---------geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard  960 (1177)
T KOG1025|consen  916 ---------GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD  960 (1177)
T ss_pred             ---------cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence                     112223448888999999999999999999999999888776543

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-29  Score=205.94  Aligned_cols=158  Identities=25%  Similarity=0.389  Sum_probs=123.4

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeec---------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDF---------------------------------------------------   94 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l---------------------------------------------------   94 (268)
                      ...||+|+.|+|||+...++++.+|+|.+                                                   
T Consensus        84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG  163 (364)
T KOG0581|consen   84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG  163 (364)
T ss_pred             hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence            47899999999999999999999999943                                                   


Q ss_pred             ------------CccchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           95 ------------KPCTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        95 ------------~~~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                  ++...-+++.+|.+||.|||+ .+   |+||||||+|+|++..+..|+ |||.               
T Consensus       164 SLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT  240 (364)
T KOG0581|consen  164 SLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGT  240 (364)
T ss_pred             CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccc
Confidence                        223456799999999999997 55   999999999999999999999 5553               


Q ss_pred             ----------CCCcCccccEeechHHHHHHHhCCCCCCcccccccch---hhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 ----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL---HNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 ----------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                +..|+.++||||||+.++|+.+|+.||..........   ..++-...++.+++-               
T Consensus       241 ~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~---------------  305 (364)
T KOG0581|consen  241 SAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG---------------  305 (364)
T ss_pred             ccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc---------------
Confidence                      3568999999999999999999999998532211222   222222222222110               


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  .++.++..++..|++.||.+|||..++++
T Consensus       306 ------------~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  306 ------------EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             ------------cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                        35667888999999999999999999984

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-30  Score=236.75  Aligned_cols=134  Identities=24%  Similarity=0.420  Sum_probs=108.9

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------  146 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------  146 (268)
                      .+.+.++.|||+|+.||++++   ++||||.++|+|++....+|+ |||++                             
T Consensus       802 ~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d  878 (1025)
T KOG1095|consen  802 RDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD  878 (1025)
T ss_pred             HHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh
Confidence            457899999999999999988   999999999999999999998 56554                             


Q ss_pred             CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          147 NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       147 ~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      ..|++|+|||||||++||++| |..||.+..+... +..+...+                             +.+.+..
T Consensus       879 ~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~~~~gg-----------------------------RL~~P~~  928 (1025)
T KOG1095|consen  879 GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLDVLEGG-----------------------------RLDPPSY  928 (1025)
T ss_pred             cccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHHHHhCC-----------------------------ccCCCCC
Confidence            458999999999999999999 9999986433211 11111111                             1122348


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      |+++++++|..||+.+|++||+|..+++.+..+.....
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL  966 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence            88999999999999999999999999999998877654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=2.3e-29  Score=210.60  Aligned_cols=192  Identities=23%  Similarity=0.324  Sum_probs=131.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ...+....+|+|.||.||||.+  +++.||||.|+.                                            
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt  287 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT  287 (534)
T ss_pred             CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence            4455567899999999999999  469999996654                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhc------CCCCeeecCCCCCccccCCCCceee-eeccCCCc-
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHH------SEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQF-  149 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~------~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~-  149 (268)
                                         ....+++..+++||+|||+.      .+++|+|||||++|||+.+|.++-+ |||++..+ 
T Consensus       288 ~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~  367 (534)
T KOG3653|consen  288 EFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLE  367 (534)
T ss_pred             eeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEec
Confidence                               45678999999999999973      3577999999999999999999888 66655221 


Q ss_pred             ----------------------------------CccccEeechHHHHHHHhCCCCCCc-ccccccchhhHhhhhCccch
Q 044875          150 ----------------------------------STNGDVYSYGKLLLEIFTGKRSTSD-MFTEGLGLHNFVKMAVPDQI  194 (268)
Q Consensus       150 ----------------------------------~~~~Dv~s~G~vl~el~tg~~p~~~-~~~~~~~~~~~~~~~~~~~~  194 (268)
                                                        -.+.||||+|.|+||+++++...+. ..++-. +.--.+.+..+.+
T Consensus       368 p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq-lpfe~evG~hPt~  446 (534)
T KOG3653|consen  368 PGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ-LPFEAEVGNHPTL  446 (534)
T ss_pred             CCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccc-CchhHHhcCCCCH
Confidence                                              1358999999999999998765531 111100 0000111111111


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      .+.-+...   .....+.+++.+...    ....-+.+.+..||..||+.|.|+.-|.+++.++..-.
T Consensus       447 e~mq~~VV---~kK~RP~~p~~W~~h----~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  447 EEMQELVV---RKKQRPKIPDAWRKH----AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHHHHHH---hhccCCCChhhhhcC----ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            11111111   111122223333322    34556788889999999999999999999999987543

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=1.7e-29  Score=207.18  Aligned_cols=134  Identities=25%  Similarity=0.396  Sum_probs=107.1

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee------------------------------eeccCC
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------------------------EYGMGN  147 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i------------------------------e~~~~~  147 (268)
                      +...++.|++.|+.|||..+   ++|.||.++|++++.....++                              |-....
T Consensus       397 qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~  473 (563)
T KOG1024|consen  397 QLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS  473 (563)
T ss_pred             HHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhh
Confidence            45678899999999999998   999999999999998877766                              111224


Q ss_pred             CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHH
Q 044875          148 QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQES  226 (268)
Q Consensus       148 ~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (268)
                      .|++++||||||+++||++| |+.||.+.++...  ..+...                            +++..++-+|
T Consensus       474 ~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm--~~ylkd----------------------------GyRlaQP~NC  523 (563)
T KOG1024|consen  474 HYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEM--EHYLKD----------------------------GYRLAQPFNC  523 (563)
T ss_pred             hhcchhhhHHHHHHHHHHHhcCCCCccccCHHHH--HHHHhc----------------------------cceecCCCCC
Confidence            58999999999999999999 9999987543321  111111                            1222234489


Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          227 LITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       227 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                      +++++.+|..||+.+|++||++++++.-|.+....+.+
T Consensus       524 PDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~  561 (563)
T KOG1024|consen  524 PDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTR  561 (563)
T ss_pred             cHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999887765

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=2.8e-28  Score=202.82  Aligned_cols=177  Identities=23%  Similarity=0.389  Sum_probs=145.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      ....+.+|+|.||.||+|.+  .|+.||||.|..                                              
T Consensus       213 I~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdY  290 (513)
T KOG2052|consen  213 IVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDY  290 (513)
T ss_pred             eEEEEEecCccccceeeccc--cCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeec
Confidence            45667899999999999999  589999996654                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhh-----cCCCCeeecCCCCCccccCCCCceee-eeccCC------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHH-----HSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN------  147 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~-----~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~------  147 (268)
                                       ...++++..+|.||++||.     ++++.|.|||||++|||+.++..+-+ |+|++-      
T Consensus       291 He~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t  370 (513)
T KOG2052|consen  291 HEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT  370 (513)
T ss_pred             ccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccC
Confidence                             4568899999999999995     46788999999999999999988877 444331      


Q ss_pred             ---------CcC----------------------ccccEeechHHHHHHHhC----------CCCCCcccccccchhhHh
Q 044875          148 ---------QFS----------------------TNGDVYSYGKLLLEIFTG----------KRSTSDMFTEGLGLHNFV  186 (268)
Q Consensus       148 ---------~~~----------------------~~~Dv~s~G~vl~el~tg----------~~p~~~~~~~~~~~~~~~  186 (268)
                               +.+                      ..+||||||.|+||+..+          ..||.+..+.+.++.++.
T Consensus       371 ~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMr  450 (513)
T KOG2052|consen  371 DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMR  450 (513)
T ss_pred             CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHh
Confidence                     111                      348999999999999764          468888888888888887


Q ss_pred             hhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       187 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      +...-+++.+.+++.+...                   ++...+.++|..||..+|..|-|+-.+-..|.++.+
T Consensus       451 kVVCv~~~RP~ipnrW~s~-------------------~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  451 KVVCVQKLRPNIPNRWKSD-------------------PALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             cceeecccCCCCCcccccC-------------------HHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            7777677777666665443                   778889999999999999999999999999988874

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.95  E-value=1.2e-28  Score=210.60  Aligned_cols=178  Identities=22%  Similarity=0.371  Sum_probs=137.0

Q ss_pred             cccccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------
Q 044875           45 KDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------   96 (268)
Q Consensus        45 ~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------   96 (268)
                      ....+.++++++..       .+-||+|+-|.||.|++.  ++.||||...+                            
T Consensus       115 q~e~WeiPFe~IsE-------LeWlGSGaQGAVF~Grl~--netVAVKKV~elkETdIKHLRkLkH~NII~FkGVCtqsP  185 (904)
T KOG4721|consen  115 QEELWEIPFEEISE-------LEWLGSGAQGAVFLGRLH--NETVAVKKVRELKETDIKHLRKLKHPNIITFKGVCTQSP  185 (904)
T ss_pred             hhhhccCCHHHhhh-------hhhhccCcccceeeeecc--CceehhHHHhhhhhhhHHHHHhccCcceeeEeeeecCCc
Confidence            34556677777754       367999999999999994  78899993322                            


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----  144 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----  144 (268)
                                                .....+.++||.|+.|||.++   |+|||||+-|||+..+...|| |||     
T Consensus       186 cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~  262 (904)
T KOG4721|consen  186 CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKEL  262 (904)
T ss_pred             eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhh
Confidence                                      345788999999999999988   999999999999999988888 444     


Q ss_pred             ---------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          145 ---------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       145 ---------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           ...+.+.|+||||||||+|||+||+.||.+.......     +.....           
T Consensus       263 ~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAII-----wGVGsN-----------  326 (904)
T KOG4721|consen  263 SDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAII-----WGVGSN-----------  326 (904)
T ss_pred             hhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeE-----EeccCC-----------
Confidence                                 3367889999999999999999999999865433211     000000           


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                   .++...+..|++.+.-++++||+..|..||||.+++..|+-...++.
T Consensus       327 -------------sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell  373 (904)
T KOG4721|consen  327 -------------SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL  373 (904)
T ss_pred             -------------cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence                         11111233788889999999999999999999999998876554443

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.95  E-value=1.5e-28  Score=190.55  Aligned_cols=173  Identities=18%  Similarity=0.269  Sum_probs=135.3

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec--------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF--------------------------------------------   94 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l--------------------------------------------   94 (268)
                      ..++|.+.+.||+|||..||.++.-.++..+|+|+.                                            
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~   98 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA   98 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence            346788889999999999999998888999999922                                            


Q ss_pred             --------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           95 --------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        95 --------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                                ++...+.++.++++||.+||+.. ++..||||||.|||+..++.+.+ |+|.. 
T Consensus        99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence                                      22467889999999999999986 68999999999999999877766 44422 


Q ss_pred             --------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          147 --------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       147 --------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                                                            ...++++||||+||++|+++.|..||+.....+.++.-.+..
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n  257 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN  257 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence                                                  346899999999999999999999998665555444322222


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      +.-.. +          .+                ...++.+.+++.+|++.||.+||+..+++..++.+.
T Consensus       258 ~q~s~-P----------~~----------------~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  258 AQISI-P----------NS----------------SRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             ccccc-C----------CC----------------CCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            11000 0          00                134667999999999999999999999999998763

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=5.9e-29  Score=208.35  Aligned_cols=188  Identities=14%  Similarity=0.230  Sum_probs=134.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      ++|...++||.|+||.||+|+...++..||||.+                                              
T Consensus        10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf   89 (538)
T KOG0661|consen   10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF   89 (538)
T ss_pred             HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence            4566668899999999999999999999999922                                              


Q ss_pred             ------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           95 ------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        95 ------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                        ++.....|+.||.+||+|+|.++   +.|||+||+|||+......|+ |||++         
T Consensus        90 E~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen   90 EFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY  166 (538)
T ss_pred             HhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccccCCCc
Confidence                              22567889999999999999999   999999999999998777777 66654         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc-hhhhcCCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD-PLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~  207 (268)
                                        +.|+.++|+||+||+++|+.+-++-|++..+ -..+.........+....+.. ..+....+
T Consensus       167 TeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE-~Dqi~KIc~VLGtP~~~~~~eg~~La~~mn  245 (538)
T KOG0661|consen  167 TEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASE-IDQIYKICEVLGTPDKDSWPEGYNLASAMN  245 (538)
T ss_pred             chhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcH-HHHHHHHHHHhCCCccccchhHHHHHHHhc
Confidence                              4588999999999999999999888876432 223333333322221111111 11211111


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      -..+...-..+.. ....+..+..+++..|+++||.+|||+++.++
T Consensus       246 f~~P~~~~~~l~~-L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~  290 (538)
T KOG0661|consen  246 FRFPQVKPSPLKD-LLPNASSEAASLIERLLAWDPDKRPTASQALQ  290 (538)
T ss_pred             cCCCcCCCCChHH-hCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence            1112221112222 22347888999999999999999999999875

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=7.6e-28  Score=203.48  Aligned_cols=170  Identities=19%  Similarity=0.426  Sum_probs=125.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeE----EEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTV----VSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~l~~----------------------------------------   96 (268)
                      .+|+..+.||+|+||.||+|.+..++..    +|+|.+..                                        
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v   86 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   86 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence            5688889999999999999998655553    89995432                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||+|||+.+   ++||||||+||+++.+...++ ||+.+       
T Consensus        87 ~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          87 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccCCC
Confidence                                  234678899999999999988   999999999999998887777 33322       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |..|+.+....  .+.............        
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~--------  233 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQP--------  233 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCCCCCCC--------
Confidence                                  335678999999999999998 99998753221  111111111100000        


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                          ..+...+.+++..||+.||++||++.+++..|..+.....
T Consensus       234 --------------------~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~~  273 (316)
T cd05108         234 --------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQ  273 (316)
T ss_pred             --------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCCc
Confidence                                0233457889999999999999999999999988876543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.95  E-value=3.9e-27  Score=201.77  Aligned_cols=166  Identities=23%  Similarity=0.397  Sum_probs=129.9

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      -..++||+|-||.|..+... .+..||||.+.+                                               
T Consensus       541 ~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEn  619 (807)
T KOG1094|consen  541 RFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMEN  619 (807)
T ss_pred             ehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhc
Confidence            45678999999999999996 468999995544                                               


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       ....+++.||+.|++||.+.+   ++|||+.++|+|++.+++.|+ +||++            
T Consensus       620 GDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vq  696 (807)
T KOG1094|consen  620 GDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQ  696 (807)
T ss_pred             CcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCCceeee
Confidence                             346789999999999999988   999999999999999999999 55443            


Q ss_pred             -----------------CCcCccccEeechHHHHHHHh--CCCCCCccccccc--chhhHhhhhCccchhhhcchhhhcC
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFT--GKRSTSDMFTEGL--GLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~t--g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                       +++++++|||+||+.+||+++  .++||..+..+..  +...+........    +     ..
T Consensus       697 gr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~----~-----l~  767 (807)
T KOG1094|consen  697 GRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV----V-----LS  767 (807)
T ss_pred             cceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce----e-----cc
Confidence                             568999999999999999976  8889987654421  1111111111110    0     00


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                      .+..|+.+++++|+.||..|..+|||++++...|++.
T Consensus       768 ----------------~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  768 ----------------RPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             ----------------CCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence                            1236788899999999999999999999999888765

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.5e-28  Score=210.33  Aligned_cols=176  Identities=27%  Similarity=0.417  Sum_probs=134.2

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCe---E-EEEeecC-----------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQT---V-VSVRDFK-----------------------------------   95 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~---~-vavK~l~-----------------------------------   95 (268)
                      .++-..++.....+||+|+||.||+|++...+.   . ||+|...                                   
T Consensus       151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa  230 (474)
T KOG0194|consen  151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA  230 (474)
T ss_pred             ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            344444555566899999999999999964322   3 8999322                                   


Q ss_pred             ------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           96 ------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        96 ------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                    ...++.++.+.|.||+|||+++   ++||||.++|+|+..+...|+ |||
T Consensus       231 ~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFG  307 (474)
T KOG0194|consen  231 VLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFG  307 (474)
T ss_pred             cCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccc
Confidence                                          2567899999999999999998   999999999999999888777 555


Q ss_pred             cC---------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHh-hhhCccchh
Q 044875          145 MG---------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFV-KMAVPDQIS  195 (268)
Q Consensus       145 ~~---------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~  195 (268)
                      ++                           ..|+.++|||||||++||+++ |..||++....  .+..++ ....+...+
T Consensus       308 Ls~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~~~~~r~~~~  385 (474)
T KOG0194|consen  308 LSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIVKNGYRMPIP  385 (474)
T ss_pred             cccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHHhcCccCCCC
Confidence            43                           347899999999999999999 88999875332  122222 111111111


Q ss_pred             hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          196 EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       196 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                                  ...+..+..++..||..||++||+|.++.+.|+.+.+...
T Consensus       386 ----------------------------~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  386 ----------------------------SKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             ----------------------------CCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence                                        1446678889999999999999999999999999987654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.95  E-value=1.3e-27  Score=203.92  Aligned_cols=128  Identities=25%  Similarity=0.424  Sum_probs=94.4

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~~  150 (268)
                      .++.+++.||.|||+.+   ++||||||+||+++.+...++ |||.+                             ..++
T Consensus       178 ~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  254 (338)
T cd05102         178 CYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYT  254 (338)
T ss_pred             HHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCC
Confidence            46779999999999988   999999999999998877776 44422                             3367


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++||||||+++||+++ |..||....... .+............                            +...+..
T Consensus       255 ~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~~~~~~~----------------------------~~~~~~~  305 (338)
T cd05102         255 TQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKDGTRMRA----------------------------PENATPE  305 (338)
T ss_pred             cccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhcCCCCCC----------------------------CCCCCHH
Confidence            88999999999999997 999987532211 11111111000000                            0133456


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      +.+++..||+.||++|||+.++++.|+.+.+
T Consensus       306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         306 IYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            8899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.94  E-value=6.6e-28  Score=208.06  Aligned_cols=167  Identities=25%  Similarity=0.444  Sum_probs=133.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+..-.++||-|-||.||.|.|..-...||||.+++                                            
T Consensus       267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~  346 (1157)
T KOG4278|consen  267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMC  346 (1157)
T ss_pred             hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEeccc
Confidence            344456889999999999999988889999996655                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        ...+.++.||+.|+.||...+   ++||||.++|+|+.++-..|+ |||++           
T Consensus       347 yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAH  423 (1157)
T KOG4278|consen  347 YGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAH  423 (1157)
T ss_pred             CccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhhhcCCceecc
Confidence                              235778899999999999988   999999999999999888887 55543           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +.++.|+|||+||+++||+.| |-.||++..     +.+         +.+++          
T Consensus       424 AGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSq---------VY~LL----------  479 (1157)
T KOG4278|consen  424 AGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQ---------VYGLL----------  479 (1157)
T ss_pred             cCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHH---------HHHHH----------
Confidence                             457899999999999999998 999998632     111         11111          


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                            +..++-+.++.|+.+++++|..||++.|.+||+|+|+-+.++.+..
T Consensus       480 ------EkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  480 ------EKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             ------hccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence                  1122223345889999999999999999999999999998887653

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=3.8e-27  Score=194.28  Aligned_cols=169  Identities=19%  Similarity=0.290  Sum_probs=125.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...++..+|+|.+..                                            
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            578888999999999999999988899999993321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +++.      
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~  158 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence                                    234678889999999999988   999999999999998776665 3331      


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           +..++.++|+||||+++||+++|+.|+.........+..........   +.       
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~-------  228 (267)
T cd08228         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYP---PL-------  228 (267)
T ss_pred             hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCC---CC-------
Confidence                                 23456789999999999999999999864322111111111110000   00       


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                       .                .......+.+++..||+.+|++||++++|++.|+.++
T Consensus       229 -~----------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         229 -P----------------TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             -C----------------hhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence             0                0133456889999999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=2e-27  Score=200.57  Aligned_cols=188  Identities=21%  Similarity=0.277  Sum_probs=131.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      +.|....+||+|.||.||||+...+|+.||+|                                                
T Consensus       117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV  196 (560)
T KOG0600|consen  117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV  196 (560)
T ss_pred             HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence            45666688999999999999999999999999                                                


Q ss_pred             -----------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           93 -----------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        93 -----------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                       .|++.+...+++|++.||.|+|+.+   ++|||||.+|||+|.++..|+ |||++        
T Consensus       197 FeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~  273 (560)
T KOG0600|consen  197 FEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS  273 (560)
T ss_pred             EecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccCCCC
Confidence                             2333678899999999999999999   999999999999999999999 67765        


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..|+.++|+||.|||+.|++.|++.+.+...- ..+.........+.-..+--..+.. 
T Consensus       274 ~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEv-eQl~kIfklcGSP~e~~W~~~kLP~-  351 (560)
T KOG0600|consen  274 APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEV-EQLHKIFKLCGSPTEDYWPVSKLPH-  351 (560)
T ss_pred             cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHH-HHHHHHHHHhCCCChhccccccCCc-
Confidence                                 34789999999999999999999998864332 2222332222211111111000000 


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...--+.....+...+.....+...+.+....+..||++|.|+.++++
T Consensus       352 ~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  352 ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            000000111111122223344566778888899999999999998874

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=3.4e-27  Score=194.68  Aligned_cols=165  Identities=21%  Similarity=0.388  Sum_probs=122.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+.   ..+..+|+|.+..                                         
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   84 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV   84 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence            45777789999999999999874   3467899983322                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------  144 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------  144 (268)
                                            .....++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+         
T Consensus        85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~  161 (266)
T cd05064          85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA  161 (266)
T ss_pred             EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence                                  345788999999999999988   999999999999998877766 222         


Q ss_pred             -------------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          145 -------------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       145 -------------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                         ....++.++||||||+++||+++ |..||.......  ............           
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~~~~~~~-----------  228 (266)
T cd05064         162 IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD--VIKAVEDGFRLP-----------  228 (266)
T ss_pred             hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHHCCCCCC-----------
Confidence                               12346778999999999999875 999997542211  111111110000           


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                       .                +..++..+.+++..||+.+|++||++.++.+.|+++
T Consensus       229 -~----------------~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         229 -A----------------PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             -C----------------CCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence             0                013455688899999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>PHA02988 hypothetical protein; Provisional

Probab=99.94  E-value=2.4e-26  Score=191.37  Aligned_cols=173  Identities=23%  Similarity=0.340  Sum_probs=126.7

Q ss_pred             ccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------
Q 044875           48 LLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------   96 (268)
Q Consensus        48 ~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------   96 (268)
                      ...++++++..     .....+|+|++|.||+|.+  +|+.||+|.+..                               
T Consensus        12 ~~~i~~~~i~~-----~~~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~   84 (283)
T PHA02988         12 IKCIESDDIDK-----YTSVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY   84 (283)
T ss_pred             ceecCHHHcCC-----CCCeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            34455556522     2335799999999999999  688999994321                               


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCc
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMT  138 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~  138 (268)
                                                           ....+++.+++.|+.|||.. +   ++||||||+|++++.++.
T Consensus        85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~  161 (283)
T PHA02988         85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYK  161 (283)
T ss_pred             eeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCc
Confidence                                                 33577889999999999984 5   779999999999999888


Q ss_pred             eee-eeccC--------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-hhC
Q 044875          139 THV-EYGMG--------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAV  190 (268)
Q Consensus       139 ~~i-e~~~~--------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~  190 (268)
                      .++ +|+..                          ..++.++||||||+++||+++|+.||......  .+..... ...
T Consensus       162 ~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~--~~~~~i~~~~~  239 (283)
T PHA02988        162 LKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK--EIYDLIINKNN  239 (283)
T ss_pred             EEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhcCC
Confidence            776 33321                          35788999999999999999999999853221  1111110 000


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      ...    +                        +..++..+.+++..||+.||++|||++++++.|+.+..
T Consensus       240 ~~~----~------------------------~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        240 SLK----L------------------------PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             CCC----C------------------------CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            000    0                        01345568899999999999999999999999998763

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=1.5e-26  Score=192.18  Aligned_cols=168  Identities=23%  Similarity=0.453  Sum_probs=122.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe----EEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..++.    .+++|.+..                                        
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i   86 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV   86 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence            456667889999999999999865555    467773321                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+..       
T Consensus        87 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~  163 (279)
T cd05111          87 TQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYPDD  163 (279)
T ss_pred             EEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccCCC
Confidence                                  245678999999999999988   999999999999998877766 33321       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |..||......  ...+....+.....     +   
T Consensus       164 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~-----~---  233 (279)
T cd05111         164 KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGERLAQ-----P---  233 (279)
T ss_pred             cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCcCCC-----C---
Confidence                                  346678999999999999998 99998753211  11111111110000     0   


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                          ..+...+..++..||+.||++|||+.++.+.|..+.+.
T Consensus       234 --------------------~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         234 --------------------QICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             --------------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence                                01234567889999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=3.8e-27  Score=197.30  Aligned_cols=169  Identities=22%  Similarity=0.301  Sum_probs=120.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecC------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFK------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~------------------------------------------   95 (268)
                      +.|...+.||+|+||.||+|....+   +..+++|.-.                                          
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            5788889999999999999998766   5566666210                                          


Q ss_pred             ---------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           96 ---------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        96 ---------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                       +.....++.+++.|+.|||+.+   ++||||||+||+++.+...++ 
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~~~~~l~  168 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGNNRGYII  168 (294)
T ss_pred             eeEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCcEEEE
Confidence                                             0112458899999999999988   999999999999998777766 


Q ss_pred             eeccC----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh
Q 044875          142 EYGMG----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK  187 (268)
Q Consensus       142 e~~~~----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~  187 (268)
                      |||.+                                  ..++.++||||||++++|+++|+.||.......... ....
T Consensus       169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~-~~~~  247 (294)
T PHA02882        169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI-HAAK  247 (294)
T ss_pred             EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH-HHhH
Confidence            55542                                  235678999999999999999999998643222111 1111


Q ss_pred             hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          188 MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       188 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                      ...   .........                   ....++..+.+++..||+.+|++||++.++.+.+
T Consensus       248 ~~~---~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        248 CDF---IKRLHEGKI-------------------KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHH---HHHhhhhhh-------------------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            100   000000000                   0013356688999999999999999999998876

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=7.1e-27  Score=194.04  Aligned_cols=169  Identities=21%  Similarity=0.421  Sum_probs=124.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe----EEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..++.    .||+|.+..                                        
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~   86 (279)
T cd05109           7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLV   86 (279)
T ss_pred             hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEE
Confidence            567778999999999999999765655    478884321                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||+|||+.+   ++||||||+||+++.+...++ +|+.        
T Consensus        87 ~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          87 TQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeeccccc
Confidence                                  245678999999999999988   999999999999988776666 4432        


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           ...++.++||||||+++||+++ |..|+......  .+............         
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~---------  232 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR--EIPDLLEKGERLPQ---------  232 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCcCCC---------
Confidence                                 1235678999999999999998 88888643211  11111111110000         


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                         ...+...+..++..||+.||+.||++.+++..|..+....
T Consensus       233 -------------------~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~  272 (279)
T cd05109         233 -------------------PPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP  272 (279)
T ss_pred             -------------------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence                               0023456788999999999999999999999998876554

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=1.1e-26  Score=191.19  Aligned_cols=165  Identities=22%  Similarity=0.401  Sum_probs=123.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|.....+..+|+|.+..                                            
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMT   85 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCC
Confidence            346667889999999999999987899999994332                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                        .....++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+             
T Consensus        86 ~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          86 YGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             CCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence                              234678899999999999988   999999999999988777666 222             


Q ss_pred             ---------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ---------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ---------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                     .+..++.++||||||++++|+++ |..|++.....  ............            ... 
T Consensus       163 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~------------~~~-  227 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKGYRM------------ERP-  227 (263)
T ss_pred             CCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCCC------------CCC-
Confidence                           12345678999999999999998 88898643211  111111111000            000 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                     ...+..+.+++.+||+.||++||++.++.+.|+.+
T Consensus       228 ---------------~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         228 ---------------EGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             ---------------CCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence                           13345688899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=6.3e-27  Score=184.69  Aligned_cols=166  Identities=23%  Similarity=0.347  Sum_probs=127.1

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEe-------------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVR-------------------------------------------------   92 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK-------------------------------------------------   92 (268)
                      +|.+.++||+|+||+|||+....+|..+|.|                                                 
T Consensus        20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm   99 (375)
T KOG0591|consen   20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM   99 (375)
T ss_pred             HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence            3455688999999999999998899999999                                                 


Q ss_pred             --------------------ecCccchhhHHHHHHHHHHHHhhcCC-CCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           93 --------------------DFKPCTRLSIAIDVASALEYLHHHSE-KPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        93 --------------------~l~~~~~~~i~~~v~~~l~yLh~~~~-~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                          .+++...++++.|++.||..+|..-+ ..+.||||||.||.++.++..|+ |||++    
T Consensus       100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLS  179 (375)
T ss_pred             HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhc
Confidence                                23335678899999999999998421 23899999999999999999988 45543    


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                             ++|+.||||||+||++|||+.-.+||.+.     ++.+..........+++.|.   
T Consensus       180 s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~qgd~~~~p~~---  251 (375)
T KOG0591|consen  180 SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQGDYPPLPDE---  251 (375)
T ss_pred             chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHcCCCCCCcHH---
Confidence                                   57899999999999999999999999863     34444333333322222211   


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                           -.+..+..++..|+..||+.||+.-.+++.+.
T Consensus       252 ---------------------~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~  283 (375)
T KOG0591|consen  252 ---------------------HYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ  283 (375)
T ss_pred             ---------------------HhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence                                 45667888899999999999999655554433

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=8.7e-27  Score=192.33  Aligned_cols=167  Identities=20%  Similarity=0.317  Sum_probs=125.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|-..+.||+|+||.|-+|....+|+.||||.+..                                            
T Consensus       172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~  251 (475)
T KOG0615|consen  172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS  251 (475)
T ss_pred             ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence            344567889999999999999999999999993322                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC---Cceee-eeccCC-
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---MTTHV-EYGMGN-  147 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~---~~~~i-e~~~~~-  147 (268)
                                              ....-+++|++.|+.|||+.+   |+||||||+|||+..+   ...|+ |||++. 
T Consensus       252 YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  252 YMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             EEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecccchhhc
Confidence                                    334668899999999999999   9999999999999876   44455 666542 


Q ss_pred             ----------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          148 ----------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       148 ----------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                                  .+..++|+||+||++|-+++|.+||.+..... .+.+.+..+.....+.   
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~-sl~eQI~~G~y~f~p~---  404 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDP-SLKEQILKGRYAFGPL---  404 (475)
T ss_pred             cccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCc-cHHHHHhcCcccccCh---
Confidence                                        13458999999999999999999998644332 1222222222111111   


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQ  256 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~  256 (268)
                                  .+          .+..++...++.+++..||+.|||+.|+++  ++.
T Consensus       405 ------------~w----------~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  405 ------------QW----------DRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             ------------hh----------hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence                        00          155677899999999999999999999984  554

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=2.2e-27  Score=195.17  Aligned_cols=157  Identities=35%  Similarity=0.558  Sum_probs=115.0

Q ss_pred             CCcccCCCcceEEEEEec----CCCeEEEEeecCc---------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILD----PDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~----~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .+.||.|.||.||+|++.    ..+..|+||.+..                                             
T Consensus         4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~   83 (259)
T PF07714_consen    4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC   83 (259)
T ss_dssp             EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred             eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence            357999999999999996    4467899995532                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         ..+..++.+++.||.|||+.+   ++|++|+++||+++.++..++ +|+.           
T Consensus        84 ~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~  160 (259)
T PF07714_consen   84 PGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYK  160 (259)
T ss_dssp             TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccc
Confidence                               456889999999999999988   999999999999999888887 2221           


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                        ...++.++||||||+++||+++ |+.|+.+....  .+............            
T Consensus       161 ~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~~~~~~~~~~~------------  226 (259)
T PF07714_consen  161 NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIEKLKQGQRLPI------------  226 (259)
T ss_dssp             ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHHHHHTTEETTS------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccee------------
Confidence                              1336789999999999999999 77888754221  11111111111000            


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                      +..++..+.+++..||+.||++||||.++++.|
T Consensus       227 ----------------~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  227 ----------------PDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             ----------------BTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ----------------ccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence                            013455688999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=3.5e-26  Score=188.97  Aligned_cols=126  Identities=21%  Similarity=0.447  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.                             ...+
T Consensus       116 ~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05035         116 LKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCC
Confidence            457889999999999988   999999999999998877766 3332                             1345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||++++|+++ |..|+......  .+............                            +..+..
T Consensus       193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~----------------------------~~~~~~  242 (273)
T cd05035         193 TSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGNRLKQ----------------------------PEDCLD  242 (273)
T ss_pred             CcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC----------------------------CcCCCH
Confidence            678999999999999999 88888653221  11111111110000                            013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      .+.+++..||+.||++||++.+++..|+++
T Consensus       243 ~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         243 ELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.94  E-value=1.9e-26  Score=191.77  Aligned_cols=126  Identities=25%  Similarity=0.459  Sum_probs=94.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                             ...+
T Consensus       127 ~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05048         127 LHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcC
Confidence            468899999999999988   999999999999998877666 3332                             2345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..||......  .+...........                            .+..++.
T Consensus       204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~i~~~~~~~----------------------------~~~~~~~  253 (283)
T cd05048         204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMIRSRQLLP----------------------------CPEDCPA  253 (283)
T ss_pred             chhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCcCC----------------------------CcccCCH
Confidence            778999999999999998 99998753221  1111111111000                            0114567


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      ++.+++..||+.||++||++.+|.+.|+.+
T Consensus       254 ~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         254 RVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            789999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.94  E-value=1.8e-26  Score=180.70  Aligned_cols=180  Identities=19%  Similarity=0.289  Sum_probs=127.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|...+.+|+|.||.||+|+...+|+.||+|.+..                                             
T Consensus         3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEf   82 (318)
T KOG0659|consen    3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEF   82 (318)
T ss_pred             hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEe
Confidence            45556789999999999999999999999993322                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .+...++..+.+|++|||.+.   |+|||+||.|+|++.++..|+ |||++           
T Consensus        83 m~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~  159 (318)
T KOG0659|consen   83 MPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQT  159 (318)
T ss_pred             ccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCCcccc
Confidence                              346778899999999999998   999999999999999998888 45533           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc--cch---hhhcchhhh
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP--DQI---SEVLDPLFV  203 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~--~~~---~~~~d~~~~  203 (268)
                                       ..|++.+||||.||++.|++.|.+-+++..+- ..+....... .|  +.+   ..+-|....
T Consensus       160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDi-dQL~~If~~LGTP~~~~WP~~~~lpdY~~~  238 (318)
T KOG0659|consen  160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDI-DQLSKIFRALGTPTPDQWPEMTSLPDYVKI  238 (318)
T ss_pred             cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchH-HHHHHHHHHcCCCCcccCccccccccHHHH
Confidence                             45889999999999999999887766653222 2222222221 11  122   222222221


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...+.    .+    .......+....++++...+..||..|+++.|+++
T Consensus       239 ~~~P~----~~----~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  239 QQFPK----PP----LNNLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             hcCCC----Cc----cccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            11111    00    00122355666799999999999999999999875

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.94  E-value=2.9e-26  Score=188.98  Aligned_cols=169  Identities=20%  Similarity=0.295  Sum_probs=124.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||++....++..+++|.+..                                            
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            456777889999999999999877899999993321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.      
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence                                    234567889999999999988   999999999999998777665 3331      


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           +..++.++|+||||+++||+++|..||..................        .+..  
T Consensus       159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~--  228 (267)
T cd08229         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--------YPPL--  228 (267)
T ss_pred             CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--------CCCC--
Confidence                                 234567899999999999999999998643221111111110000        0000  


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                       .                .......+.+++..||+.||++|||+.+|.++++++.
T Consensus       229 -~----------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         229 -P----------------SDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             -C----------------cccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence             0                0134556889999999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=9.9e-27  Score=193.35  Aligned_cols=160  Identities=24%  Similarity=0.382  Sum_probs=124.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ..|.....||+|+||.||||.....++.||+|.++.                                            
T Consensus        13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey   92 (467)
T KOG0201|consen   13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY   92 (467)
T ss_pred             cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence            446666889999999999999998999999994332                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee--------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY--------------  143 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~--------------  143 (268)
                                        .....+.+++..|+.|||..+   .+|||||+.||++..++.+++ +|              
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence                              345667889999999999988   999999999999999888877 22              


Q ss_pred             -------------ccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          144 -------------GMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       144 -------------~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                   .....|+.|+|+||+|+..+||.+|.+|+....+...  .    ...+...++.++.          
T Consensus       170 tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--l----flIpk~~PP~L~~----------  233 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--L----FLIPKSAPPRLDG----------  233 (467)
T ss_pred             cccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--E----EeccCCCCCcccc----------
Confidence                         2335689999999999999999999999987554211  1    1112222222222          


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    .+...+.+++..|++.||+.|||+.+++.
T Consensus       234 --------------~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  234 --------------DFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             --------------ccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence                          33455778888899999999999999874

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.93  E-value=4.5e-26  Score=187.72  Aligned_cols=169  Identities=24%  Similarity=0.332  Sum_probs=125.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            578888999999999999999988899999994321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.      
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~  158 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS  158 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence                                    234677889999999999988   999999999999998776666 2221      


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           +..++.++|+||||+++||+++|+.|+....   ................+..      
T Consensus       159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~~------  229 (267)
T cd08224         159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCDYPPLP------  229 (267)
T ss_pred             CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCCCCCCC------
Confidence                                 2335678999999999999999999986422   1111111110000000000      


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                        .......+.+++..||+.+|++|||+.+|+++|+.++
T Consensus       230 ------------------~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         230 ------------------ADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             ------------------hhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence                              0133456888999999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.93  E-value=4e-26  Score=188.22  Aligned_cols=165  Identities=25%  Similarity=0.458  Sum_probs=122.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..+   ...+|+|.+..                                         
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            5688889999999999999998533   45789983321                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            ....+++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.        
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence                                  335678899999999999988   999999999999998876666 3221        


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           ...++.++||||||++++|+++ |..||......  .............          
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~----------  228 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGYRLP----------  228 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCCCC----------
Confidence                                 1345678999999999999998 99998643211  1111111110000          


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                        .                +..++..+.+++..||+.+|++||++.+|++.|+++
T Consensus       229 --~----------------~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         229 --P----------------PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             --C----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence              0                013345688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.93  E-value=2.8e-26  Score=190.84  Aligned_cols=177  Identities=22%  Similarity=0.313  Sum_probs=122.3

Q ss_pred             CcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc-------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ...+.||+|+||+||.+..    ..++..+|+|.+..                                           
T Consensus         7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   86 (283)
T cd05080           7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI   86 (283)
T ss_pred             eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence            5668899999999977653    34678899994321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.          
T Consensus        87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~  163 (283)
T cd05080          87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  163 (283)
T ss_pred             ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence                                345678899999999999988   999999999999998877766 3332          


Q ss_pred             --------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhc
Q 044875          146 --------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVA  204 (268)
Q Consensus       146 --------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~  204 (268)
                                          ...++.++||||||++++|+++|+.|+......-........... .....+..+.....
T Consensus       164 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (283)
T cd05080         164 YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRL  243 (283)
T ss_pred             hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCC
Confidence                                134567899999999999999999998643221110000000000 00111111111100


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .                .+...+..+.+++..||+.+|++|||++++++.|+++.
T Consensus       244 ~----------------~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         244 P----------------CPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             C----------------CCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            0                01134567899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=3.7e-26  Score=188.84  Aligned_cols=127  Identities=22%  Similarity=0.433  Sum_probs=92.6

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      ...++.+++.|++|||+.+   ++||||||+||+++.+...++ ||+..                             ..
T Consensus       114 ~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  190 (272)
T cd05075         114 LVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRV  190 (272)
T ss_pred             HHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCC
Confidence            3567789999999999988   999999999999998877776 44321                             23


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++|+||||+++||+++ |+.||......  .+...........            ..                ...+
T Consensus       191 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~----------------~~~~  240 (272)
T cd05075         191 YTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGNRLK------------QP----------------PDCL  240 (272)
T ss_pred             cChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCCCC------------CC----------------CCCC
Confidence            5678999999999999999 78888642211  1111111111000            00                0234


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      ..+.+++..||+.||++|||+.++++.|+.+
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            4578999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=3.3e-26  Score=188.10  Aligned_cols=164  Identities=23%  Similarity=0.427  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... ++..+|+|.+..                                            
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   84 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMA   84 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCC
Confidence            56777889999999999999976 567799994332                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.            
T Consensus        85 ~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          85 KGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             CCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence                              234568889999999999988   999999999999998877665 2221            


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      ...++.++|+||||+++||+++ |..||.......  ...........       +     .. 
T Consensus       162 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~--~~~~~~~~~~~-------~-----~~-  226 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD--VMSALQRGYRM-------P-----RM-  226 (261)
T ss_pred             CCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH--HHHHHHcCCCC-------C-----CC-
Confidence                            1335668999999999999998 999987532211  11111111100       0     00 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                     ...+..+.+++.+||+.+|++||+++++.+.|+.+
T Consensus       227 ---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         227 ---------------ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             ---------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence                           02345588899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.93  E-value=1.1e-26  Score=200.56  Aligned_cols=165  Identities=22%  Similarity=0.382  Sum_probs=128.2

Q ss_pred             CCcCCcccCCCcceEEEEEecCC----CeEEEEeecCc------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPD----QTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~l~~------------------------------------------   96 (268)
                      ....++||.|-||.||+|.+.+.    .--||||..+.                                          
T Consensus       391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmE  470 (974)
T KOG4257|consen  391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVME  470 (974)
T ss_pred             ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEe
Confidence            34567899999999999998432    34588883322                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.|++.+|+|||+.+   ++||||..+|||+.+....|+ |||++         
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY  547 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY  547 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccccchh
Confidence                                345678899999999999988   999999999999999888887 66654         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         .+++++||||.||+.+||+++ |.+||.+..+.+..  ...+.+.                
T Consensus       548 kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI--~~iEnGe----------------  609 (974)
T KOG4257|consen  548 KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI--GHIENGE----------------  609 (974)
T ss_pred             hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE--EEecCCC----------------
Confidence                               458999999999999999998 99999865433210  0001110                


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                  +...+..|+..++.+|..||+.||.+||.+.++...|.++.+
T Consensus       610 ------------RlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  610 ------------RLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ------------CCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence                        111123788889999999999999999999999999998876

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.93  E-value=7.7e-26  Score=189.59  Aligned_cols=132  Identities=22%  Similarity=0.374  Sum_probs=97.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------------------CCCcCcc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------------------GNQFSTN  152 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------------------~~~~~~~  152 (268)
                      ..++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.                          ...++.+
T Consensus       122 ~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  198 (297)
T cd05089         122 LQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTK  198 (297)
T ss_pred             HHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCch
Confidence            568889999999999988   999999999999998877766 3332                          1345788


Q ss_pred             ccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHH
Q 044875          153 GDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITIL  231 (268)
Q Consensus       153 ~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (268)
                      +||||||++++|+++ |..||.......  ............            ..                ......+.
T Consensus       199 ~DvwSlG~il~el~t~g~~pf~~~~~~~--~~~~~~~~~~~~------------~~----------------~~~~~~~~  248 (297)
T cd05089         199 SDVWSFGVLLWEIVSLGGTPYCGMTCAE--LYEKLPQGYRME------------KP----------------RNCDDEVY  248 (297)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHhcCCCCC------------CC----------------CCCCHHHH
Confidence            999999999999998 999986532211  111110000000            00                02345688


Q ss_pred             HHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          232 KIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       232 ~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                      +++..||+.+|.+||++.++++.|..+.+++..
T Consensus       249 ~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~  281 (297)
T cd05089         249 ELMRQCWRDRPYERPPFAQISVQLSRMLEARKA  281 (297)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=4.2e-26  Score=197.11  Aligned_cols=128  Identities=25%  Similarity=0.425  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      .+++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.                             ...+
T Consensus       215 ~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  291 (374)
T cd05106         215 LRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVY  291 (374)
T ss_pred             HHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCC
Confidence            457889999999999988   999999999999998777666 3332                             1346


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |+.||....... ..............+.                            ..+.
T Consensus       292 ~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~~~~~----------------------------~~~~  342 (374)
T cd05106         292 TVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQMSRPD----------------------------FAPP  342 (374)
T ss_pred             CccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCccCCC----------------------------CCCH
Confidence            789999999999999997 999997543221 1111111111100000                            1234


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      ++.+++..||+.||++|||+.+|+++|+++.
T Consensus       343 ~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         343 EIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            5788999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=5.1e-26  Score=188.94  Aligned_cols=169  Identities=22%  Similarity=0.421  Sum_probs=125.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC----CCeEEEEeecCc---------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP----DQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~----~~~~vavK~l~~---------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....    .+..+++|.+..                                       
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            3677788999999999999999864    267888883321                                       


Q ss_pred             --------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee
Q 044875           97 --------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY  143 (268)
Q Consensus        97 --------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~  143 (268)
                                                      .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ ++
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d~  161 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITDN  161 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECCC
Confidence                                            223568889999999999988   999999999999988777766 33


Q ss_pred             cc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccc
Q 044875          144 GM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQ  193 (268)
Q Consensus       144 ~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~  193 (268)
                      +.                             ...++.++||||||+++||+++ |+.||.....  ..+...........
T Consensus       162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~  239 (280)
T cd05043         162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYRLA  239 (280)
T ss_pred             CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCCCC
Confidence            32                             1335678999999999999999 9999875322  11222211111000


Q ss_pred             hhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          194 ISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       194 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .                            ...++..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       240 ~----------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         240 Q----------------------------PINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             C----------------------------CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            0                            012345688999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=3.8e-26  Score=196.86  Aligned_cols=159  Identities=18%  Similarity=0.287  Sum_probs=123.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      ..|...+.||+|||..||.++...+|+.+|+|..                                              
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            3567778999999999999999779999999933                                              


Q ss_pred             ------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           95 ------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        95 ------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                        ++.....+..||+.|+.|||+.+   |+|||||-.|++++++++.|| |||++         
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Er  174 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGER  174 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCcccc
Confidence                              33556789999999999999998   999999999999999999999 66654         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ...+..+||||+||++|-++.|++||....-  .+....+...... +              
T Consensus       175 k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v--kety~~Ik~~~Y~-~--------------  237 (592)
T KOG0575|consen  175 KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV--KETYNKIKLNEYS-M--------------  237 (592)
T ss_pred             cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH--HHHHHHHHhcCcc-c--------------
Confidence                              2346789999999999999999999985211  1111111111100 0              


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    +.....+..+++...++.||.+|||..+|+.
T Consensus       238 --------------P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  238 --------------PSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             --------------ccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence                          1123445677888899999999999999984

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=4e-26  Score=190.26  Aligned_cols=187  Identities=21%  Similarity=0.335  Sum_probs=123.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            467778899999999999999988899999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.           
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence                               234678899999999999988   999999999999998877766 3332           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Ccc-chhhhc-chhhhc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPD-QISEVL-DPLFVA  204 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~-~~~~~~-d~~~~~  204 (268)
                                       +..++.++|+||||+++||+++|+.||....... .........  .+. ...... ++....
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07848         158 YTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPRFHG  236 (287)
T ss_pred             ccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccchhcc
Confidence                             2346788999999999999999999997532211 111111110  010 000000 000000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .. ...... ...............+.+++..|++.||++|||++++++
T Consensus       237 ~~-~~~~~~-~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         237 LR-FPAVNH-PQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cc-cCcccC-cccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            00 000000 000001111124566899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.93  E-value=4.5e-26  Score=189.94  Aligned_cols=167  Identities=20%  Similarity=0.337  Sum_probs=120.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||++....+++.+|+|.+..                                              
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence            5666889999999999999988899999993321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ ||+.          
T Consensus        82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05631          82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV  158 (285)
T ss_pred             cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee
Confidence                                234677889999999999988   999999999999998777766 4432          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      +..++.++||||||+++||+++|+.||........ ...... .......         ..   
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~~~-~~~~~~~---------~~---  224 (285)
T cd05631         159 RGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEVDR-RVKEDQE---------EY---  224 (285)
T ss_pred             cCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHHHH-Hhhcccc---------cC---
Confidence                            23467889999999999999999999975322110 000000 0000000         00   


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH--HHHHhH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN--NLQTVK  259 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~--~L~~l~  259 (268)
                                   .......+.+++..||+.||.+||+     ++++.+  +++++.
T Consensus       225 -------------~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         225 -------------SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             -------------CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence                         0123445788999999999999997     788875  455543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.93  E-value=6e-26  Score=189.47  Aligned_cols=180  Identities=18%  Similarity=0.299  Sum_probs=119.4

Q ss_pred             CCCcCCcccCCCcceEEEEEec-CCCeEEEEeecCc--------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILD-PDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|... .++..+|+|.+..                                            
T Consensus         2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~   81 (290)
T cd07862           2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE   81 (290)
T ss_pred             CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence            5777789999999999999974 4578899983221                                            


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--  145 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--  145 (268)
                                                  .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.  
T Consensus        82 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~~~  158 (290)
T cd07862          82 TKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR  158 (290)
T ss_pred             CcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccceE
Confidence                                        234568899999999999988   999999999999998877776 4432  


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC---ccchhhhc
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV---PDQISEVL  198 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~  198 (268)
                                              ...++.++||||||+++||+++|++||....... .+........   +.......
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  237 (290)
T cd07862         159 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDV  237 (290)
T ss_pred             eccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhh
Confidence                                    2346788999999999999999999997532211 1111111111   11111000


Q ss_pred             c--hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 D--PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .  ........   ....+.     ........+.+++.+|++.||++|||+.++++
T Consensus       238 ~~~~~~~~~~~---~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         238 ALPRQAFHSKS---AQPIEK-----FVTDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             cccchhccCCC---CCCHHH-----HccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            0  00000000   000000     00123455678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.93  E-value=3.8e-26  Score=194.31  Aligned_cols=163  Identities=21%  Similarity=0.363  Sum_probs=123.6

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ++..++|...+.||+|+|++|++++...++..+|||+++.                                        
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence            4445789999999999999999999998999999993332                                        


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+|..|+.|||+.+   |+||||||+|||++.++..++ |||.+    
T Consensus       149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence                                     445678889999999999999   999999999999999999988 44432    


Q ss_pred             ------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          147 ------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       147 ------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                                                          +..+..+|+|+|||++|+|+.|.+||.....- ..+...+...+
T Consensus       226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney-liFqkI~~l~y  304 (604)
T KOG0592|consen  226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY-LIFQKIQALDY  304 (604)
T ss_pred             hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH-HHHHHHHHhcc
Confidence                                                33567899999999999999999999753211 11111111111


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        .+++                            ..++.+.+|+..-+-.||.+|++.++|.+
T Consensus       305 --~fp~----------------------------~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  305 --EFPE----------------------------GFPEDARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             --cCCC----------------------------CCCHHHHHHHHHHHccCccccccHHHHhh
Confidence              1111                            22234666777788889999999988764

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.93  E-value=5.7e-26  Score=187.39  Aligned_cols=166  Identities=24%  Similarity=0.488  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCC---eEEEEeecCc----------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQ---TVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~l~~----------------------------------------   96 (268)
                      +++|...+.||+|+||.||+|....++   ..+|+|....                                        
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   83 (268)
T cd05063           4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI   83 (268)
T ss_pred             hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence            356777889999999999999986444   3788883321                                        


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------  145 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------  145 (268)
                                             .....++.+++.|+.|||+.+   ++|+|+||+||+++.+...++ +|+.       
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecccc
Confidence                                   345778899999999999988   999999999999998877666 3321       


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                             ...++.++||||||+++||+++ |..||......  ...........  .+      
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~--~~~~~i~~~~~--~~------  230 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH--EVMKAINDGFR--LP------  230 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH--HHHHHHhcCCC--CC------
Confidence                                   1234678999999999999997 99998643211  11111111000  00      


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                          ..                ...+..+.+++.+||+.+|++||++.+|++.|+++
T Consensus       231 ----~~----------------~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         231 ----AP----------------MDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             ----CC----------------CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence                00                02345688999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.93  E-value=5.1e-26  Score=196.66  Aligned_cols=126  Identities=24%  Similarity=0.396  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~~  150 (268)
                      .++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.                             ...++
T Consensus       218 ~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  294 (375)
T cd05104         218 SFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYT  294 (375)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCC
Confidence            46789999999999988   999999999999998776666 4432                             13467


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++||||||+++||+++ |..||....... .............            ..                ...+.+
T Consensus       295 ~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~------------~~----------------~~~~~~  345 (375)
T cd05104         295 FESDVWSYGILLWEIFSLGSSPYPGMPVDS-KFYKMIKEGYRML------------SP----------------ECAPSE  345 (375)
T ss_pred             CCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HHHHHHHhCccCC------------CC----------------CCCCHH
Confidence            88999999999999998 888887532221 1111111111000            00                012345


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      +.+++..||+.||++|||+.+|++.|++.
T Consensus       346 l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         346 MYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            88999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.93  E-value=7.6e-26  Score=192.91  Aligned_cols=128  Identities=25%  Similarity=0.420  Sum_probs=93.6

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~~  150 (268)
                      .++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.+                             ..++
T Consensus       177 ~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  253 (337)
T cd05054         177 SYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYT  253 (337)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCC
Confidence            46789999999999988   999999999999998777666 44422                             3357


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++|||||||+++|+++ |..||....... .+..........            ..                +.....+
T Consensus       254 ~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~------------~~----------------~~~~~~~  304 (337)
T cd05054         254 TQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRM------------RA----------------PEYATPE  304 (337)
T ss_pred             ccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCC------------CC----------------CccCCHH
Confidence            78999999999999998 999986422111 111111110000            00                0123456


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      +.+++..||+.+|++||++.++++.|+.+.+
T Consensus       305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            8899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=3.5e-26  Score=203.12  Aligned_cols=119  Identities=26%  Similarity=0.464  Sum_probs=95.7

Q ss_pred             HHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------
Q 044875           54 ESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------   96 (268)
Q Consensus        54 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------   96 (268)
                      +++...+++|...+.||+|+||+||+|.....++.||+|.+..                                     
T Consensus       122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            3455566889999999999999999999988899999995421                                     


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCc--------
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMT--------  138 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~--------  138 (268)
                                                   .....++.+++.||.|||+ .+   ++||||||+|||++.+..        
T Consensus       202 ~~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~~~~  278 (467)
T PTZ00284        202 NETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPVTNR  278 (467)
T ss_pred             cCCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCccccccccc
Confidence                                         1235688899999999998 47   999999999999986542        


Q ss_pred             --------eee-eec------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          139 --------THV-EYG------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       139 --------~~i-e~~------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                              .++ |||                        .+..++.++|||||||++||+++|+.||+..
T Consensus       279 ~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~  348 (467)
T PTZ00284        279 ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH  348 (467)
T ss_pred             ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                    333 443                        2245788999999999999999999999753

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.93  E-value=5.3e-26  Score=197.60  Aligned_cols=111  Identities=32%  Similarity=0.516  Sum_probs=94.6

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|...+.||+|+||.|.|+....+++.||||.++.                                             
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciV  266 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIV  266 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeee
Confidence            45677889999999999999999999999994443                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-------------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------  141 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-------------  141 (268)
                                            .....++.||+.||.+||..+   |||+||||+|||+.......+             
T Consensus       267 fELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q  343 (586)
T KOG0667|consen  267 FELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ  343 (586)
T ss_pred             ehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccccccCC
Confidence                                  345679999999999999988   999999999999986554444             


Q ss_pred             --------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          142 --------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       142 --------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                    |..++.+|+.+.||||||||+.||++|.+-|++.
T Consensus       344 ~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~  391 (586)
T KOG0667|consen  344 RVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGD  391 (586)
T ss_pred             cceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCC
Confidence                          4445678999999999999999999998877754

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=3.9e-26  Score=187.65  Aligned_cols=166  Identities=26%  Similarity=0.466  Sum_probs=124.0

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      +.++|...+.||.|+||.||+|.... +..+++|.+..                                          
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            34567777899999999999999985 88899993322                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.         
T Consensus        83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence                                 234678899999999999988   999999999999998877766 3321         


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                        ...++.++|+||||++++++++ |+.||......  .............            .
T Consensus       160 ~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~  225 (261)
T cd05148         160 LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAGYRMP------------C  225 (261)
T ss_pred             cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhCCcCC------------C
Confidence                              2346678999999999999998 88898653211  1111111110000            0


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                      +..++..+.+++.+||+.||++|||++++.+.|+.+
T Consensus       226 ----------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         226 ----------------PAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             ----------------CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence                            013445688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=4.6e-26  Score=198.81  Aligned_cols=156  Identities=26%  Similarity=0.409  Sum_probs=121.3

Q ss_pred             CCcccCCCcceEEEEEecC---CCeEEEEeecCc----------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~----------------------------------------------   96 (268)
                      .+.||+|.||.|++|.|..   +...||||-+..                                              
T Consensus       115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl  194 (1039)
T KOG0199|consen  115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL  194 (1039)
T ss_pred             HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence            3678999999999999842   235789993322                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.|||.|++||.++.   ++||||.++|+|+......|| |||+.            
T Consensus       195 GSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm  271 (1039)
T KOG0199|consen  195 GSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVM  271 (1039)
T ss_pred             chHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCcceEe
Confidence                             234578899999999999988   999999999999999888888 45532            


Q ss_pred             ------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        ..|+.++|||+|||.+|||+| |+.||.+....              .+.+.+|..-...  
T Consensus       272 ~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------------qIL~~iD~~erLp--  335 (1039)
T KOG0199|consen  272 APQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------------QILKNIDAGERLP--  335 (1039)
T ss_pred             cCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------------HHHHhccccccCC--
Confidence                              468999999999999999999 89999753221              1222233211111  


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                    .+..|+++++++|+.||..+|++||+|..|.+.
T Consensus       336 --------------RPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  336 --------------RPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             --------------CCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence                          223889999999999999999999999999743

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=8.7e-26  Score=185.16  Aligned_cols=161  Identities=24%  Similarity=0.428  Sum_probs=118.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++.+. ++..+|+|.+..                                            
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~   82 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME   82 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence            34666788999999999999986 556789983221                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+||+|+||+++.++..++ +|+.             
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~  159 (256)
T cd05114          83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC
Confidence                             235678889999999999988   999999999999998877666 3331             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     +..++.++|+||||+++||+++ |+.||......  .............     .+         
T Consensus       160 ~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~--~~~~~i~~~~~~~-----~~---------  223 (256)
T cd05114         160 GAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY--EVVEMISRGFRLY-----RP---------  223 (256)
T ss_pred             CCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCCCC-----CC---------
Confidence                           1335678999999999999999 88898643211  1111111111000     00         


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                    ......+.+++.+||+.+|++||+++++++.|
T Consensus       224 --------------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         224 --------------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             --------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence                          01234578999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.93  E-value=8.3e-26  Score=184.28  Aligned_cols=190  Identities=20%  Similarity=0.331  Sum_probs=126.7

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+++|.|+||.||+|.+..+++.||||+...                                              
T Consensus        26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP  105 (364)
T KOG0658|consen   26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP  105 (364)
T ss_pred             EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence            3445789999999999999988899999993211                                              


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC---------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG---------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~---------  146 (268)
                                         ....-+..|+.+||+|||+.+   |+||||||.|+|+|.+ +..|+ |||.+         
T Consensus       106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epn  182 (364)
T KOG0658|consen  106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPN  182 (364)
T ss_pred             HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceeeccCCCc
Confidence                               233456779999999999988   9999999999999976 66666 55543         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhh--cchhhhcCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEV--LDPLFVAGG  206 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~  206 (268)
                                        ..|+.+.||||.||++.|++-|++-|++.... ..+...++....+.-.++  ..+.-..  
T Consensus       183 iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~-dQL~eIik~lG~Pt~e~I~~mn~~y~~--  259 (364)
T KOG0658|consen  183 ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV-DQLVEIIKVLGTPTREDIKSMNPNYTE--  259 (364)
T ss_pred             eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH-HHHHHHHHHhCCCCHHHHhhcCccccc--
Confidence                              45899999999999999999999988863322 233333332222211111  0110000  


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                       ...+..-......-.......+.++++..+++.+|.+|.++.+++.  ..++++
T Consensus       260 -~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  260 -FKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             -ccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhh
Confidence             0000000000000112244567889999999999999999999884  444444

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.93  E-value=6.9e-26  Score=190.41  Aligned_cols=188  Identities=18%  Similarity=0.273  Sum_probs=123.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.+|+|.+..                                           
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            3678888999999999999999988899999994321                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+          
T Consensus        84 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  160 (303)
T cd07869          84 YVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTY  160 (303)
T ss_pred             CCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCCccC
Confidence                               234668889999999999988   999999999999998877766 34321          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhhcc-hhhh-
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEVLD-PLFV-  203 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-~~~~-  203 (268)
                                        ..++.++|+||+||+++|+++|..||.........+..........   ....... +... 
T Consensus       161 ~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (303)
T cd07869         161 SNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKP  240 (303)
T ss_pred             CCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcccccc
Confidence                              2356789999999999999999999986432222222111111100   0000000 0000 


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .......+.........   ......+.+++..|++.||++|||+.++++
T Consensus       241 ~~~~~~~~~~~~~~~~~---~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         241 ERFTLYSPKNLRQAWNK---LSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             ccccccCCccHHHHhhc---cCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            00000000000000000   012345678889999999999999999984

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=3.3e-26  Score=204.07  Aligned_cols=166  Identities=20%  Similarity=0.297  Sum_probs=123.8

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      +.....++|...+.||+|+||+||++....+++.+|+|.+..                                      
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~  105 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP  105 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence            344455788889999999999999999988899999994321                                      


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..
T Consensus       106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~v  182 (496)
T PTZ00283        106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLV  182 (496)
T ss_pred             cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCE
Confidence                                                 112346789999999999988   9999999999999988877


Q ss_pred             ee-eeccC-----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh
Q 044875          140 HV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA  189 (268)
Q Consensus       140 ~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~  189 (268)
                      ++ |||.+                             ..++.++||||||+++||+++|+.||.....     .......
T Consensus       183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~-----~~~~~~~  257 (496)
T PTZ00283        183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENM-----EEVMHKT  257 (496)
T ss_pred             EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHH
Confidence            77 55532                             3467889999999999999999999974211     1111111


Q ss_pred             CccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          190 VPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       190 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ......    +                     .+...+.++.+++..||+.||.+||++.++++
T Consensus       258 ~~~~~~----~---------------------~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        258 LAGRYD----P---------------------LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             hcCCCC----C---------------------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence            100000    0                     00133456888999999999999999999875

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=1.2e-25  Score=189.02  Aligned_cols=131  Identities=24%  Similarity=0.385  Sum_probs=90.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      .+++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+                             ..+
T Consensus       141 ~~i~~~i~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         141 LHVALQIASGMKYLSSLN---FVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             HHHHHHHHHHHHHHHHCC---ccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC
Confidence            468999999999999988   999999999999998877776 44422                             346


Q ss_pred             CccccEeechHHHHHHHh--CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT--GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      +.++||||||+++||+++  +..|+......  ..................     ..                .+..++
T Consensus       218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~----------------~~~~~~  274 (304)
T cd05096         218 TTASDVWAFGVTLWEILMLCKEQPYGELTDE--QVIENAGEFFRDQGRQVY-----LF----------------RPPPCP  274 (304)
T ss_pred             CchhhhHHHHHHHHHHHHccCCCCCCcCCHH--HHHHHHHHHhhhcccccc-----cc----------------CCCCCC
Confidence            778999999999999987  45566543221  111111100000000000     00                001345


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ..+.+++.+||+.||++|||+.+|.+.|+
T Consensus       275 ~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         275 QGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            56899999999999999999999998886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.93  E-value=1.3e-25  Score=184.26  Aligned_cols=157  Identities=24%  Similarity=0.417  Sum_probs=116.9

Q ss_pred             cccCCCcceEEEEEe--cCCCeEEEEeecCc-------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGIL--DPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~--~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .||+|+||.||+|.+  ..++..+|+|.+..                                                 
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~   81 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP   81 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence            589999999999975  34678899994421                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------  146 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------  146 (268)
                                   .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ ||+.+                
T Consensus        82 L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05116          82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHG  158 (257)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCC
Confidence                         345788899999999999988   999999999999998876666 33321                


Q ss_pred             --------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ..++.++|+||||+++||+++ |..||......  .+............+                
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~~~~~~----------------  220 (257)
T cd05116         159 KWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGERMECP----------------  220 (257)
T ss_pred             CCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCCCCCC----------------
Confidence                          234568999999999999998 99998753221  122222211111100                


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                  ..++.++.+++..||+.||++||++.+|+..|+.
T Consensus       221 ------------~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         221 ------------QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             ------------CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence                        0234567889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.93  E-value=7.2e-26  Score=182.52  Aligned_cols=187  Identities=20%  Similarity=0.248  Sum_probs=130.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.|++|+||.||+|+...+++.||+|++..                                            
T Consensus        76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V  155 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV  155 (419)
T ss_pred             HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence            456667889999999999999999999999995543                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....+..|+.+|++|||++.   |+|||||++|+|+...+..|+ |||++        
T Consensus       156 Me~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k  232 (419)
T KOG0663|consen  156 MEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK  232 (419)
T ss_pred             HHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcCCcc
Confidence                                 345678899999999999998   999999999999999998888 66654        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-hhCcc--chhhhcchhhh
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAVPD--QISEVLDPLFV  203 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~d~~~~  203 (268)
                                          ..|++++|+||+|||+.|++++++-|++.... ..+...+. .+.|.  .++.+......
T Consensus       233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~iwpg~~~lp~~  311 (419)
T KOG0663|consen  233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAIWPGYSELPAV  311 (419)
T ss_pred             cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCccccCCCccccchh
Confidence                                34789999999999999999999888764332 22333322 22222  12222111111


Q ss_pred             cCCCccchhhhHHhhhhhchHH-HHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQE-SLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .  .......+...++...... ..+.-++++...+..||..|-|+++.+.
T Consensus       312 k--~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  312 K--KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             h--ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence            0  0111222222333332222 3455677778899999999999998763

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=1.1e-25  Score=185.04  Aligned_cols=163  Identities=21%  Similarity=0.411  Sum_probs=121.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...++||+|+||.||+|... +++.+|+|.+..                                            
T Consensus         6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05067           6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMEN   84 (260)
T ss_pred             HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCC
Confidence            56777889999999999999976 678899994332                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.             
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05067          85 GSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTARE  161 (260)
T ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCccccc
Confidence                             234678889999999999988   999999999999998876666 3221             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ...++.++|+||||++++|+++ |+.||......  .............            ..  
T Consensus       162 ~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~--  225 (260)
T cd05067         162 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYRMP------------RP--  225 (260)
T ss_pred             CCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCCCC------------CC--
Confidence                           1234678999999999999999 99999753211  1111111110000            00  


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                    ...+.++.+++.+||+.+|++||+++++...|+.
T Consensus       226 --------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         226 --------------DNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             --------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence                          0234568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.93  E-value=5.4e-26  Score=200.19  Aligned_cols=193  Identities=20%  Similarity=0.322  Sum_probs=125.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l  144 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV  144 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence            3568888999999999999999988899999993311                                           


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC---
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG---  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~---  146 (268)
                                               .....++.+++.||.|||+.+   ++||||||+||+++.+. ..++ |||.+   
T Consensus       145 vmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFGla~~~  221 (440)
T PTZ00036        145 VMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFGSAKNL  221 (440)
T ss_pred             EEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccccchhc
Confidence                                     112346679999999999988   99999999999998654 4555 44422   


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-chhhhcch
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-QISEVLDP  200 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d~  200 (268)
                                              ..++.++||||+||++||+++|.+||....... .+....... .+. .......+
T Consensus       222 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~~~~~~~~~  300 (440)
T PTZ00036        222 LAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTEDQLKEMNP  300 (440)
T ss_pred             cCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhch
Confidence                                    246788999999999999999999997543221 111111111 110 00000011


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH--HHHHHhH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV--NNLQTVK  259 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~--~~L~~l~  259 (268)
                      ......   .+...........+...+.++.+++..||+.||.+|||+.+++  ..++.+.
T Consensus       301 ~~~~~~---~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~  358 (440)
T PTZ00036        301 NYADIK---FPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR  358 (440)
T ss_pred             hhhccc---CCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhh
Confidence            000000   0000000011111113346788999999999999999999998  4665554

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.93  E-value=1.2e-25  Score=193.05  Aligned_cols=162  Identities=22%  Similarity=0.342  Sum_probs=117.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....+++.||+|.+..                                             
T Consensus        75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  154 (353)
T PLN00034         75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM  154 (353)
T ss_pred             HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence            34455789999999999999988899999995421                                             


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC---------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN---------------  147 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~---------------  147 (268)
                                   .....++.+++.||.|||+.+   ++|||||++||+++.+...++ ||+.+.               
T Consensus       155 ~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  231 (353)
T PLN00034        155 DGGSLEGTHIADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGT  231 (353)
T ss_pred             CCCcccccccCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccC
Confidence                         223578899999999999988   999999999999998887777 444321               


Q ss_pred             -----------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          148 -----------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       148 -----------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                       ..+.++|||||||++||+++|+.||.....  ...............     +    .     
T Consensus       232 ~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~-----~----~-----  295 (353)
T PLN00034        232 IAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQP-----P----E-----  295 (353)
T ss_pred             ccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccCC-----C----C-----
Confidence                             112479999999999999999999973211  111111110000000     0    0     


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                 .......++.+++..||+.||++||++.++++
T Consensus       296 -----------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        296 -----------APATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             -----------CCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       00133456889999999999999999999985

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.93  E-value=1.5e-25  Score=184.91  Aligned_cols=168  Identities=18%  Similarity=0.318  Sum_probs=120.2

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      |++.+++++.....||+|+||.||+|....++..+++|.+..                                      
T Consensus         2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (268)
T cd06624           2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK   81 (268)
T ss_pred             CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence            456677888888899999999999999988888999993322                                      


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eecc---
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGM---  145 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~---  145 (268)
                                                .....++.+++.|++|||+.+   ++|+||||+||+++. +...++ +|+.   
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~  158 (268)
T cd06624          82 IFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKR  158 (268)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhhee
Confidence                                      123457789999999999988   999999999999975 334444 2221   


Q ss_pred             ------------------------C--CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          146 ------------------------G--NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       146 ------------------------~--~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                              .  ..++.++|+||||+++||+++|..|+............   ..... .    .
T Consensus       159 ~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~---~~~~~-~----~  230 (268)
T cd06624         159 LAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFK---VGMFK-I----H  230 (268)
T ss_pred             cccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhh---hhhhc-c----C
Confidence                                    1  12567899999999999999999998753221111100   00000 0    0


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +.                    .+.....++..++.+||+.+|++|||+.+++.
T Consensus       231 ~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         231 PE--------------------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CC--------------------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            00                    00133455788999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.3e-25  Score=187.10  Aligned_cols=169  Identities=23%  Similarity=0.382  Sum_probs=126.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|....+||.|..++||+|...+.++.||||.++-                                            
T Consensus        26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf  105 (516)
T KOG0582|consen   26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF  105 (516)
T ss_pred             cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence            667788999999999999999988999999994432                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....+.+++.+||.|||.++   .+|||+|+.|||++.++..++ +|+.          
T Consensus       106 Ma~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R  182 (516)
T KOG0582|consen  106 MAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDR  182 (516)
T ss_pred             hcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccCce
Confidence                                345678899999999999999   999999999999999999888 2211          


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             ...|+.|+||||||+...|+.+|..||....+....+..... ..|......+|.  
T Consensus       183 ~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn-~pp~~~t~~~~~--  259 (516)
T KOG0582|consen  183 QVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN-DPPTLLTSGLDK--  259 (516)
T ss_pred             eeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC-CCCCcccccCCh--
Confidence                                   134889999999999999999999999875544332222111 111101111111  


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        +........+.+++-.|++.||..|||+++++.
T Consensus       260 ------------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  260 ------------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             ------------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                              111233446778888899999999999999883

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=2.3e-25  Score=187.31  Aligned_cols=132  Identities=24%  Similarity=0.383  Sum_probs=96.2

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------------------CCcCc
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------------------NQFST  151 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------------------~~~~~  151 (268)
                      ...++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+..                          ..++.
T Consensus       126 ~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  202 (303)
T cd05088         126 LLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTT  202 (303)
T ss_pred             HHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcc
Confidence            3567889999999999988   999999999999998877766 44422                          23578


Q ss_pred             cccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHH
Q 044875          152 NGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITI  230 (268)
Q Consensus       152 ~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
                      ++||||||++++|+++ |..||......  .............            .                +......+
T Consensus       203 ~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~~------------~----------------~~~~~~~~  252 (303)
T cd05088         203 NSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGYRLE------------K----------------PLNCDDEV  252 (303)
T ss_pred             cccchhhhhHHHHHHhcCCCCcccCChH--HHHHHHhcCCcCC------------C----------------CCCCCHHH
Confidence            8999999999999998 99998643221  1111111000000            0                00223457


Q ss_pred             HHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          231 LKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       231 ~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      .+++.+||+.+|++||++.++++.|..+.+...
T Consensus       253 ~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         253 YDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence            889999999999999999999999998876644

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.92  E-value=8.2e-26  Score=187.99  Aligned_cols=125  Identities=22%  Similarity=0.426  Sum_probs=91.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++||||||.||+++.+...++ ||+.                             ...+
T Consensus       127 ~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05091         127 VHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCC
Confidence            457789999999999988   999999999999998776666 4432                             2345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||++++|+++ |..|+......  .............            ..                .+++.
T Consensus       204 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~i~~~~~~~------------~~----------------~~~~~  253 (283)
T cd05091         204 SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVIEMIRNRQVLP------------CP----------------DDCPA  253 (283)
T ss_pred             CcchhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCCcCC------------CC----------------CCCCH
Confidence            778999999999999998 88887643221  1111111111000            00                13455


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      .+..++..||+.+|++||++++|++.|+.
T Consensus       254 ~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         254 WVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            68899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.8e-25  Score=183.74  Aligned_cols=165  Identities=27%  Similarity=0.431  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|... ++..+|+|.+..                                           
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   83 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM   83 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence            356777899999999999999986 567899994322                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------  144 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------  144 (268)
                                         .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+            
T Consensus        84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence                               234678889999999999988   999999999999998776666 222            


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                      ....++.++|+||||++++|+++ |+.||......  ............            ...
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~------------~~~  226 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGYRM------------PCP  226 (261)
T ss_pred             cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCC------------CCC
Confidence                            11335678999999999999999 99888643211  111111110000            000


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                      ...+..+.+++.+||+.+|++||++.++.+.|+++
T Consensus       227 ----------------~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         227 ----------------PGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             ----------------CcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence                            13345688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.92  E-value=1.9e-25  Score=187.76  Aligned_cols=170  Identities=20%  Similarity=0.411  Sum_probs=123.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe----EEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..++.    .+|+|.+..                                        
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v   86 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV   86 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence            456677889999999999999865554    468873221                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..       
T Consensus        87 ~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~  163 (303)
T cd05110          87 TQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE  163 (303)
T ss_pred             ehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccCcc
Confidence                                  234678899999999999988   999999999999988777666 33321       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |..|+......  ....+.........         
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~---------  232 (303)
T cd05110         164 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR--EIPDLLEKGERLPQ---------  232 (303)
T ss_pred             cccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCCCCCC---------
Confidence                                  335678999999999999997 88898653211  11111111100000         


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                         .                ..+...+..++..||..+|++||+++++++.|+++.+...
T Consensus       233 ---~----------------~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~~  273 (303)
T cd05110         233 ---P----------------PICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQ  273 (303)
T ss_pred             ---C----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhchh
Confidence               0                0223457889999999999999999999999999876544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=6.5e-26  Score=187.17  Aligned_cols=162  Identities=25%  Similarity=0.464  Sum_probs=118.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------------   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------------   93 (268)
                      .++...+.||+|+||+||.+....+|...|||.                                               
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE   96 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME   96 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence            345556889999999999999987899999992                                               


Q ss_pred             -----------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccCC-------
Q 044875           94 -----------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMGN-------  147 (268)
Q Consensus        94 -----------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~~-------  147 (268)
                                       |++....++.+++++||.|||+++   ++||||||+|||++. ++..++ |||...       
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~  173 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT  173 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence                             222456788999999999999988   999999999999999 677777 555221       


Q ss_pred             ----------------------CcC--ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          148 ----------------------QFS--TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       148 ----------------------~~~--~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ...  .++||||+||++.||+||++||.+....   .......+.....+++      
T Consensus       174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~---~~~~~~ig~~~~~P~i------  244 (313)
T KOG0198|consen  174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE---AEALLLIGREDSLPEI------  244 (313)
T ss_pred             cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch---HHHHHHHhccCCCCCC------
Confidence                                  112  3899999999999999999999864111   1111111111111111      


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                         +...+.+..+++..|++.||+.|||+.++++
T Consensus       245 -------------------p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~  275 (313)
T KOG0198|consen  245 -------------------PDSLSDEAKDFLRKCFKRDPEKRPTAEELLE  275 (313)
T ss_pred             -------------------CcccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence                               0123445667778899999999999999986

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.92  E-value=1.7e-25  Score=183.43  Aligned_cols=163  Identities=25%  Similarity=0.389  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++...  +..+|+|.+..                                            
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~   83 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   83 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence            46777789999999999999874  67788883221                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+..           
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  160 (256)
T cd05082          84 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  160 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence                              234678899999999999988   999999999999998887777 44322           


Q ss_pred             -------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ..++.++||||||+++||+++ |+.||......  .+........+...                  
T Consensus       161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~------------------  220 (256)
T cd05082         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMDA------------------  220 (256)
T ss_pred             cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCCCCC------------------
Confidence                         346778999999999999998 88888642111  11111111111000                  


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                ...++..+.+++..||+.+|++|||+.++++.|+.+
T Consensus       221 ----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         221 ----------PDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             ----------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence                      013345688899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.92  E-value=2e-25  Score=182.54  Aligned_cols=157  Identities=25%  Similarity=0.413  Sum_probs=116.5

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|....+++.+|+|.+..                                                  
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            358999999999999988899999993321                                                  


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------  145 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------  145 (268)
                                   .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.                 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  157 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ  157 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence                         334678899999999999988   999999999999998776666 3332                 


Q ss_pred             ------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                  +..++.++|+||||++++|+++ |..|+.......  .........+.            ...     
T Consensus       158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~--~~~~~~~~~~~------------~~~-----  218 (252)
T cd05084         158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQ--TREAIEQGVRL------------PCP-----  218 (252)
T ss_pred             CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHH--HHHHHHcCCCC------------CCc-----
Confidence                        1235667899999999999998 888886432211  11111110000            000     


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                 ...+..+.+++..||+.+|++|||+.++.++|+
T Consensus       219 -----------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         219 -----------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             -----------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence                       133456888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.92  E-value=2.4e-25  Score=186.13  Aligned_cols=127  Identities=25%  Similarity=0.435  Sum_probs=93.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      +.++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                             ...+
T Consensus       135 ~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  211 (293)
T cd05053         135 VSFAYQVARGMEFLASKK---CIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVY  211 (293)
T ss_pred             HHHHHHHHHHHHHHHHCC---ccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCc
Confidence            457889999999999988   999999999999998877766 3332                             2345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..|+.......  ...........            ..                +..+..
T Consensus       212 ~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~~------------~~----------------~~~~~~  261 (293)
T cd05053         212 THQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKLLKEGYRM------------EK----------------PQNCTQ  261 (293)
T ss_pred             CcccceeehhhHHHHHhcCCCCCCCCCCHHH--HHHHHHcCCcC------------CC----------------CCCCCH
Confidence            678999999999999998 888886432111  11111100000            00                013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .+.+++..||+.||++|||+.++++.|+++.
T Consensus       262 ~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         262 ELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            6889999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=3.2e-25  Score=181.88  Aligned_cols=160  Identities=28%  Similarity=0.431  Sum_probs=118.4

Q ss_pred             CcccCCCcceEEEEEecCCC---eEEEEeecCc-----------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQ---TVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~---~~vavK~l~~-----------------------------------------------   96 (268)
                      +.||+|+||.||+|.+...+   ..+|+|.+..                                               
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~   80 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG   80 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence            46999999999999875444   6899983331                                               


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------------  145 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------------  145 (268)
                                    .....++.+++.++.|||+.+   ++|+||||+|++++.+...++ +|+.                
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~  157 (257)
T cd05060          81 PLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTA  157 (257)
T ss_pred             cHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcccccccC
Confidence                          345789999999999999988   999999999999998876666 2221                


Q ss_pred             --------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    ...++.++|+||||+++||+++ |..||......  .+........+..            ..   
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~---  220 (257)
T cd05060         158 GRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA--EVIAMLESGERLP------------RP---  220 (257)
T ss_pred             ccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCcCC------------CC---
Confidence                          1335678999999999999998 99998753221  1222221111100            00   


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                   ..++..+.+++.+||+.+|++||++.++.+.|+++.
T Consensus       221 -------------~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         221 -------------EECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             -------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence                         123456889999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=1.9e-25  Score=185.92  Aligned_cols=179  Identities=22%  Similarity=0.355  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      .+|...+.||+|+||.||++..    ..++..+|+|.+..                                        
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   83 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR   83 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence            4667778899999999999985    34678899994321                                        


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.||+|||+.+   ++|+||||+||+++.+...++ +|+.      
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~  160 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVLPQ  160 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence                                    234677899999999999988   999999999999998877766 3332      


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc--cchhhhcc
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP--DQISEVLD  199 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~d  199 (268)
                                              +..++.++|+||||++++|+++|..|+.....   ...........  .......+
T Consensus       161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd05081         161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA---EFMRMMGNDKQGQMIVYHLIE  237 (284)
T ss_pred             CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch---hhhhhcccccccccchHHHHH
Confidence                                    13456789999999999999998766542111   00000000000  00000000


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                       .+.....            -......+..+.+++..||+.+|++|||+.+|++.|+.+
T Consensus       238 -~~~~~~~------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         238 -LLKNNGR------------LPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             -HHhcCCc------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence             0000000            000113455689999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.92  E-value=3.1e-25  Score=185.11  Aligned_cols=168  Identities=24%  Similarity=0.418  Sum_probs=122.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||.||++..     ..++..+|+|.+..                                       
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   84 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   84 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence            5677788999999999999985     23456788883321                                       


Q ss_pred             -----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           97 -----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        97 -----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                                                         .....++.+++.+|+|||+.+   ++||||||+||+++.+...++
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl  161 (288)
T cd05093          85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  161 (288)
T ss_pred             EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence                                               234568899999999999988   999999999999998877666


Q ss_pred             -eecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhC
Q 044875          142 -EYGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       142 -e~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                       +|+.                             ...++.++|+||||++++|+++ |..|+.......  .........
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~~~  239 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQGR  239 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCC
Confidence             3322                             1335678999999999999998 888886432111  111111110


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ....            .                ...+..+.+++..||+.||.+|||+.++...|+.+.+.
T Consensus       240 ~~~~------------~----------------~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         240 VLQR------------P----------------RTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             cCCC------------C----------------CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            0000            0                02234589999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.92  E-value=3.5e-25  Score=182.07  Aligned_cols=129  Identities=24%  Similarity=0.427  Sum_probs=92.1

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------------------  146 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------------------  146 (268)
                      ...++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+..                               
T Consensus       100 ~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  176 (262)
T cd05058         100 LIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT  176 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc
Confidence            3567789999999999988   999999999999998877766 44321                               


Q ss_pred             CCcCccccEeechHHHHHHHhC-CCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          147 NQFSTNGDVYSYGKLLLEIFTG-KRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       147 ~~~~~~~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      ..++.++||||||+++||+++| .+|+.....  ..+........+...            .                ..
T Consensus       177 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------------~----------------~~  226 (262)
T cd05058         177 QKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQGRRLLQ------------P----------------EY  226 (262)
T ss_pred             CccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhcCCCCCC------------C----------------Cc
Confidence            2346689999999999999995 556653211  111111111000000            0                02


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      .+..+.+++..||+.+|++||++.+++..|+.+..
T Consensus       227 ~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         227 CPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            23458899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.92  E-value=3.7e-25  Score=188.26  Aligned_cols=112  Identities=28%  Similarity=0.461  Sum_probs=93.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (331)
T cd06649           5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (331)
T ss_pred             ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence            678888999999999999999998899999993321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.|+.|||+.+  .++||||||+||+++.++..++ +|+.            
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (331)
T cd06649          85 MDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSF  162 (331)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcccccccccccccC
Confidence                              234578889999999999842  2999999999999998877776 4432            


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                   +..++.++|+||||+++||+++|+.||..
T Consensus       163 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         163 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence                         23467889999999999999999999964

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.1e-25  Score=196.52  Aligned_cols=157  Identities=19%  Similarity=0.353  Sum_probs=121.4

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .-+||+|.||+||-|+...+...+|||.+++                                                 
T Consensus       580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            3479999999999999998889999995554                                                 


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccC-------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMG-------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~-------------  146 (268)
                                     ...-...+||.+||.|||++.   |+|||||-.|+|++. .+..|+ |||.+             
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF  736 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF  736 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence                           345678899999999999988   999999999999973 445555 44432             


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..|+.++|+|||||.+.||.||++||-+......   .+.+.+....-++              
T Consensus       737 TGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---AMFkVGmyKvHP~--------------  799 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---AMFKVGMYKVHPP--------------  799 (1226)
T ss_pred             ccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---hhhhhcceecCCC--------------
Confidence                            3488999999999999999999999986543322   2222222111000              


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                 .+.+..++.-++++.|+..||.+|||++++++
T Consensus       800 -----------iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  800 -----------IPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             -----------CcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence                       12367788899999999999999999999874

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.92  E-value=1.3e-25  Score=194.10  Aligned_cols=184  Identities=16%  Similarity=0.268  Sum_probs=121.5

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||++....+++.||+|.+..                                             
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            47788999999999999999988899999994421                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+       
T Consensus        81 lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~  157 (372)
T cd07853          81 VVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE  157 (372)
T ss_pred             EEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence                                  224567889999999999988   999999999999999887776 34321       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhh---c---
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEV---L---  198 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~---  198 (268)
                                            ..++.++||||+||+++|+++|+.||....... .+.........+.....   .   
T Consensus       158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~~  236 (372)
T cd07853         158 SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSACEGA  236 (372)
T ss_pred             cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhHHH
Confidence                                  235778999999999999999999997533211 11111111000000000   0   


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...+...... .+.. ....  ........++.+++..|++.||++|||+.++++
T Consensus       237 ~~~~~~~~~~-~~~~-~~~~--~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         237 RAHILRGPHK-PPSL-PVLY--TLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHhCCCC-CCch-HHhc--ccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence            0000000000 0000 0000  000122456788999999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.92  E-value=4.6e-25  Score=182.42  Aligned_cols=126  Identities=24%  Similarity=0.464  Sum_probs=93.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      ..++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+..                             ..+
T Consensus       116 ~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05074         116 VRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVY  192 (273)
T ss_pred             HHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCcc
Confidence            567889999999999988   999999999999998877777 44321                             224


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |+.|+......  .+............            .                ...+.
T Consensus       193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~------------~----------------~~~~~  242 (273)
T cd05074         193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENS--EIYNYLIKGNRLKQ------------P----------------PDCLE  242 (273)
T ss_pred             chhhhhHHHHHHHHHHhhCCCCCCCCCCHH--HHHHHHHcCCcCCC------------C----------------CCCCH
Confidence            668999999999999999 88887643221  11111111100000            0                02345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      .+.+++.+||+.+|++|||+.++.+.|+++
T Consensus       243 ~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         243 DVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            689999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.92  E-value=1.6e-25  Score=190.86  Aligned_cols=187  Identities=20%  Similarity=0.371  Sum_probs=121.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....++..||+|.+..                                              
T Consensus         2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~l   81 (338)
T cd07859           2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYV   81 (338)
T ss_pred             eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEE
Confidence            5667889999999999999988899999994321                                              


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..        
T Consensus        82 v~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~  158 (338)
T cd07859          82 VFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVAFNDTP  158 (338)
T ss_pred             EEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccccccccC
Confidence                                 234568889999999999988   999999999999998887776 33321        


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc--cchhhhcc
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP--DQISEVLD  199 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~d  199 (268)
                                              ..++.++|||||||+++|+++|+.||....... .+....... .+  .....+..
T Consensus       159 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~  237 (338)
T cd07859         159 TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVH-QLDLITDLLGTPSPETISRVRN  237 (338)
T ss_pred             ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhhh
Confidence                                    245678999999999999999999997532110 000000000 00  00000000


Q ss_pred             hh---hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          200 PL---FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       200 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                      ..   .........+.....     ........+.+++..||+.||++|||++++++  +++.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         238 EKARRYLSSMRKKQPVPFSQ-----KFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             hhHHHHHHhhcccCCCchHH-----hcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence            00   000000000000000     00012345788999999999999999999984  44443

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=3.5e-25  Score=181.96  Aligned_cols=163  Identities=25%  Similarity=0.454  Sum_probs=120.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... ++..+|+|.+..                                            
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~   84 (260)
T cd05070           6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSK   84 (260)
T ss_pred             HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCC
Confidence            45667788999999999999886 566788883321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.             
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05070          85 GSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccccccc
Confidence                             235778899999999999988   999999999999998876665 2221             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ...++.++|+||||++++|+++ |..||......  ..........+..            .+  
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~--  225 (260)
T cd05070         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGYRMP------------CP--  225 (260)
T ss_pred             CCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCC------------CC--
Confidence                           1335678999999999999999 88888653211  1111111110000            00  


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                    ...+..+.+++.+||+.+|++|||++++.+.|+.
T Consensus       226 --------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         226 --------------QDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             --------------CcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                          1334568899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-25  Score=193.20  Aligned_cols=159  Identities=26%  Similarity=0.332  Sum_probs=126.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|++.+.||+|+||.||-+....+.+.||||.++.                                             
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME  106 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME  106 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence            46777889999999999999988999999995443                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....|+.+...||+|||+.+   .+|||||+.|||+...+..|+ |||.+          
T Consensus       107 YClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFv  183 (948)
T KOG0577|consen  107 YCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFV  183 (948)
T ss_pred             HHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCchhccc
Confidence                               345678889999999999998   999999999999999988888 55533          


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      +.|+-++||||+|+...|+.-+++|++++...... +..+....|.         +..      
T Consensus       184 GTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL-YHIAQNesPt---------Lqs------  247 (948)
T KOG0577|consen  184 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNESPT---------LQS------  247 (948)
T ss_pred             CCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH-HHHHhcCCCC---------CCC------
Confidence                            56899999999999999999999999976544322 1222211111         100      


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                                   .+..+.+.+++..|++.-|.+|||.++++
T Consensus       248 -------------~eWS~~F~~Fvd~CLqKipqeRptse~ll  276 (948)
T KOG0577|consen  248 -------------NEWSDYFRNFVDSCLQKIPQERPTSEELL  276 (948)
T ss_pred             -------------chhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence                         15577788999999999999999998876

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.92  E-value=3.8e-25  Score=184.71  Aligned_cols=128  Identities=23%  Similarity=0.455  Sum_probs=95.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      +.++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+..                             ..+
T Consensus       130 ~~i~~~i~~~l~~LH~~~---ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  206 (290)
T cd05045         130 ISFAWQISRGMQYLAEMK---LVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIY  206 (290)
T ss_pred             HHHHHHHHHHHHHHHHCC---eehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCc
Confidence            578889999999999988   999999999999998877776 44332                             235


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||++++|+++ |..|+......  .+.+.........            .                +.....
T Consensus       207 ~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~------------~----------------~~~~~~  256 (290)
T cd05045         207 TTQSDVWSFGVLLWEIVTLGGNPYPGIAPE--RLFNLLKTGYRME------------R----------------PENCSE  256 (290)
T ss_pred             chHhHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCCC------------C----------------CCCCCH
Confidence            677999999999999998 99998653221  1111111111000            0                013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      ++.+++..||+.+|++||++++++..|+++..
T Consensus       257 ~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         257 EMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            68899999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.92  E-value=1.6e-25  Score=184.75  Aligned_cols=114  Identities=32%  Similarity=0.544  Sum_probs=96.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------------   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------------   93 (268)
                      ++|.....||+|+||+||+|+...++..||||.                                               
T Consensus        10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME   89 (429)
T KOG0595|consen   10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME   89 (429)
T ss_pred             ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence            677777889999999999999999999999992                                               


Q ss_pred             ----------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC------Cceee-eecc-----
Q 044875           94 ----------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND------MTTHV-EYGM-----  145 (268)
Q Consensus        94 ----------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~------~~~~i-e~~~-----  145 (268)
                                      +++.....++.|+|.|+++||+++   |+||||||.|||++..      -..|+ |||+     
T Consensus        90 yC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~  166 (429)
T KOG0595|consen   90 YCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ  166 (429)
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence                            222456778999999999999999   9999999999999876      22334 4553     


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                           ...|+.|+|+||.|+++||+++|+.||+....
T Consensus       167 ~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~  219 (429)
T KOG0595|consen  167 PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP  219 (429)
T ss_pred             chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH
Confidence                                 36799999999999999999999999985433

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.92  E-value=4.1e-25  Score=183.64  Aligned_cols=162  Identities=25%  Similarity=0.403  Sum_probs=119.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..||+|.+..                                            
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            467788899999999999999988899999993321                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                            .....++.+++.|+.|||++ +   ++||||||+||+++.+...++ +|+.+      
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          81 VMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             hhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence                                  23457889999999999986 6   999999999999998877776 33321      


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++|+||||+++||+++|+.|+.........+...... ......       
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~-------  229 (283)
T cd06617         158 VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE-PSPQLP-------  229 (283)
T ss_pred             cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc-CCCCCC-------
Confidence                                    224678999999999999999999986422111111111100 000000       


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                          .                ...+..+..++..||+.+|++||++.++++
T Consensus       230 ----~----------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         230 ----A----------------EKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             ----c----------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                0                023456888999999999999999999985

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.92  E-value=1.7e-25  Score=184.97  Aligned_cols=164  Identities=19%  Similarity=0.338  Sum_probs=120.0

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      .+++.|+..+.||+|+||.||+|....+++.+|+|.+..                                         
T Consensus         3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (272)
T cd06637           3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD   82 (272)
T ss_pred             ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCc
Confidence            456778888999999999999999988899999993211                                         


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                                  .....++.+++.|++|||+.+   ++|+|++|+||+++.+...++ +|+.. 
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          83 QLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             EEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCCce
Confidence                                        223558889999999999988   999999999999998876666 33221 


Q ss_pred             -------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchh
Q 044875          147 -------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS  195 (268)
Q Consensus       147 -------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  195 (268)
                                                     ..++.++|+||||+++||+++|..|+.........    ... ......
T Consensus       160 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~----~~~-~~~~~~  234 (272)
T cd06637         160 QLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL----FLI-PRNPAP  234 (272)
T ss_pred             ecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHH----HHH-hcCCCC
Confidence                                           23566899999999999999999998643221110    000 000000


Q ss_pred             hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          196 EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       196 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...+                        ...+..+.+++..||+.||.+|||+.+++.
T Consensus       235 ~~~~------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         235 RLKS------------------------KKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CCCC------------------------CCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            0000                        022345788999999999999999999874

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2.4e-25  Score=193.24  Aligned_cols=111  Identities=26%  Similarity=0.419  Sum_probs=93.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|+..+.||+|+||.||++....+++.||+|...                                             
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~~~L~~  171 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQRGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYKTDLYC  171 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhhhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCCCCHHH
Confidence            57888999999999999999998899999999221                                             


Q ss_pred             ---------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------
Q 044875           96 ---------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------  146 (268)
Q Consensus        96 ---------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------  146 (268)
                               ......++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+                   
T Consensus       172 ~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~  248 (391)
T PHA03212        172 YLAAKRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIA  248 (391)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccC
Confidence                     1345678899999999999988   999999999999998777766 55432                   


Q ss_pred             ---------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ---------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ---------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                               ..++.++||||||+++||+++|..|+..
T Consensus       249 y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~  285 (391)
T PHA03212        249 TNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFE  285 (391)
T ss_pred             CCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCC
Confidence                     3467789999999999999999988753

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.92  E-value=3.8e-25  Score=184.83  Aligned_cols=130  Identities=25%  Similarity=0.432  Sum_probs=96.4

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~  148 (268)
                      ...++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+.                             +..
T Consensus       125 ~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  201 (291)
T cd05094         125 MLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK  201 (291)
T ss_pred             HHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCC
Confidence            4678899999999999988   999999999999998877666 3332                             133


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++||||||++++|+++ |..||.......  ..+..........                            ...++
T Consensus       202 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~~----------------------------~~~~~  251 (291)
T cd05094         202 FTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECITQGRVLER----------------------------PRVCP  251 (291)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHhCCCCCCC----------------------------CccCC
Confidence            5678999999999999998 999986532211  1111111100000                            01234


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ..+.+++.+||+.||++||++.+|+++|+.+.+.
T Consensus       252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            5688999999999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.92  E-value=2.1e-25  Score=189.12  Aligned_cols=153  Identities=21%  Similarity=0.341  Sum_probs=113.7

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            368999999999999988999999994321                                                  


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------------  146 (268)
                                    .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+..               
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  157 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceec
Confidence                          234567789999999999988   999999999999998877776 44432               


Q ss_pred             ------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          147 ------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       147 ------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                  ..++.++||||+||+++|+++|+.||......  ........... .++                   
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~-~~p-------------------  215 (323)
T cd05571         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-RFP-------------------  215 (323)
T ss_pred             CccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHH--HHHHHHHcCCC-CCC-------------------
Confidence                        34678899999999999999999999742211  11111100000 000                   


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                               .....++.+++..||+.||++||     ++.++++
T Consensus       216 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         216 ---------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             ---------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence                     02234577889999999999999     7888763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.92  E-value=4.4e-25  Score=184.01  Aligned_cols=181  Identities=19%  Similarity=0.295  Sum_probs=119.3

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~   81 (288)
T cd07863           2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK   81 (288)
T ss_pred             ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence            5667889999999999999988899999993321                                              


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----  145 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----  145 (268)
                                                .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.    
T Consensus        82 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~~~~  158 (288)
T cd07863          82 VTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLARIY  158 (288)
T ss_pred             EEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCccccc
Confidence                                      233568889999999999988   999999999999998877766 3332    


Q ss_pred             ----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-c--cchhhhcch
Q 044875          146 ----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-P--DQISEVLDP  200 (268)
Q Consensus       146 ----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~d~  200 (268)
                                            +..++.++|+||+|++++|+++|++||...... ..+........ +  .........
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07863         159 SCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRDVTL  237 (288)
T ss_pred             cCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCcccccc
Confidence                                  234678899999999999999999998643221 11111111100 0  000000000


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      . ...........     ......+....+.+++..|++.||++|||+.+++.
T Consensus       238 ~-~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         238 P-RGAFSPRGPRP-----VQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             c-ccccCCCCCCc-----hHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0 00000000000     00001123456788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=3e-25  Score=184.17  Aligned_cols=164  Identities=24%  Similarity=0.397  Sum_probs=119.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~~--------------------------------------   96 (268)
                      +++|...+.||+|+||.||+|....     .+..+|+|.+..                                      
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4678888999999999999999975     567899994331                                      


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-  141 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-  141 (268)
                                                     .....++.+++.|+.|||+.+   ++|+||||+||+++.+.   ..++ 
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence                                           123468899999999999988   99999999999997543   2333 


Q ss_pred             eecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCc
Q 044875          142 EYGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVP  191 (268)
Q Consensus       142 e~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  191 (268)
                      +|+.                             +..++.++|||||||++||+++ |..||.......  +.........
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~  239 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTGGGR  239 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHcCCc
Confidence            3322                             2346789999999999999997 999987532211  1111111100


Q ss_pred             cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          192 DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       192 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ..            .                +...+..+.+++..||+.+|++|||+.+|++.|+
T Consensus       240 ~~------------~----------------~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         240 LD------------P----------------PKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CC------------C----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            00            0                0133456889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.92  E-value=2e-25  Score=185.17  Aligned_cols=165  Identities=24%  Similarity=0.413  Sum_probs=120.0

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc-------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP-------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~-------------------------------------   96 (268)
                      .+++|...+.||+|+||.||+|...     .++..+|+|.+..                                     
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4577888899999999999999763     2356799984321                                     


Q ss_pred             -----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           97 -----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        97 -----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                                                         .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l  160 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  160 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence                                               013457889999999999987   999999999999998877666


Q ss_pred             -eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhC
Q 044875          142 -EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       142 -e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                       +|+..                             ..++.++||||||++++|+++ |..||......  ..........
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~  238 (277)
T cd05062         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNE--QVLRFVMEGG  238 (277)
T ss_pred             CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC
Confidence             44321                             345778999999999999999 78888643221  1111111100


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ....                            +..++..+.+++.+||+.||++|||+.++++.|+
T Consensus       239 ~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         239 LLDK----------------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             cCCC----------------------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            0000                            0123456888999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.92  E-value=2.4e-25  Score=188.80  Aligned_cols=153  Identities=21%  Similarity=0.315  Sum_probs=115.1

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....++..+|+|.+..                                             
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            46677899999999999999988889999993321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.          
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~  157 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT  157 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc
Confidence                                345678899999999999988   999999999999998877776 4442          


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ...++.++|+|||||++||+++|+.||......  .+......... ..            + 
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~~~~~-~~------------p-  221 (323)
T cd05616         158 TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEHNV-AY------------P-  221 (323)
T ss_pred             cccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CC------------C-
Confidence                             234678999999999999999999999753221  11111110000 00            0 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                     .....++.+++..|++.||++|++.
T Consensus       222 ---------------~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         222 ---------------KSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             ---------------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence                           0223457889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.3e-25  Score=188.74  Aligned_cols=167  Identities=19%  Similarity=0.232  Sum_probs=121.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            357778899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.          
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~  157 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANS  157 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCcccccccCC
Confidence                                234567889999999999988   999999999999998887776 4442          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..++.++|||||||++||+++|..||........ .............+...++.          
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~----------  226 (333)
T cd05600         158 VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNET-WENLKYWKETLQRPVYDDPR----------  226 (333)
T ss_pred             cccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHH-HHHHHhccccccCCCCCccc----------
Confidence                          23467899999999999999999999975322110 00000000000000000000          


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  .....++.+++..||+.+|++||++.+++.
T Consensus       227 ------------~~~s~~~~~li~~~l~~~~~rr~s~~~ll~  256 (333)
T cd05600         227 ------------FNLSDEAWDLITKLINDPSRRFGSLEDIKN  256 (333)
T ss_pred             ------------cccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence                        123456788999999999999999999985

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-25  Score=183.06  Aligned_cols=191  Identities=16%  Similarity=0.265  Sum_probs=128.2

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC------------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK------------------------------------------   95 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~------------------------------------------   95 (268)
                      .....|...+.||+|+||.|.++....+|+.||+|.+.                                          
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            33455655678999999999999999999999999433                                          


Q ss_pred             -------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           96 -------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        96 -------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                               +.+...+..|+.+||.|+|+.+   ++||||||+|++++.+...|+ |||++   
T Consensus        99 ~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen   99 NDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             ceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccceeec
Confidence                                     1345668889999999999988   999999999999999888887 55543   


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCccchhhh
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPDQISEV  197 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~  197 (268)
                                                 ..|+.++||||.||++.|+++|++-|++...-..  .+.+......++.+..+
T Consensus       176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i  255 (359)
T KOG0660|consen  176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI  255 (359)
T ss_pred             cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence                                       3578999999999999999999998886432111  11111111111111111


Q ss_pred             cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      -...... .-...+..+...+....+ ......+++...++..||.+|+|++|.++
T Consensus       256 ~s~~ar~-yi~slp~~p~~~f~~~fp-~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  256 RSEKARP-YIKSLPQIPKQPFSSIFP-NANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             ccHHHHH-HHHhCCCCCCCCHHHHcC-CCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            1111110 000001111111122222 33345788888999999999999999874

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.92  E-value=5.3e-25  Score=180.76  Aligned_cols=158  Identities=25%  Similarity=0.432  Sum_probs=116.6

Q ss_pred             cccCCCcceEEEEEec--CCCeEEEEeecCc-------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGILD--PDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .||+|+||.||+|.+.  +++..+|+|.+..                                                 
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L   81 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL   81 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence            3899999999999774  4456789983322                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------  146 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------  146 (268)
                                   ....+++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+..                
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  158 (257)
T cd05115          82 NKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAG  158 (257)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCC
Confidence                         345788999999999999988   999999999999988776666 33321                


Q ss_pred             --------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ..++.++||||||+++||+++ |..||......  .............            .+    
T Consensus       159 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~----  220 (257)
T cd05115         159 KWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKRLD------------CP----  220 (257)
T ss_pred             CCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCCCC------------CC----
Confidence                          235668999999999999996 99999754221  1111111111100            00    


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                  ..++.++.+++..||+.+|++||++.+|.+.|+.+
T Consensus       221 ------------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         221 ------------AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             ------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence                        13355688899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.92  E-value=6.8e-25  Score=179.58  Aligned_cols=159  Identities=26%  Similarity=0.335  Sum_probs=118.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||+|....++..+++|.+..                                             
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            46667889999999999999988899999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------  144 (268)
                                          .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+           
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence                                234568889999999999988   999999999999998777766 333           


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      ....++.++|+||||++++|+++|+.||......  ...............             
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~-------------  222 (256)
T cd08529         158 ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG--ALILKIIRGVFPPVS-------------  222 (256)
T ss_pred             hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCCCc-------------
Confidence                            1234577899999999999999999999743211  111111000000000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ......+.+++.+||+.+|++||++.+++.
T Consensus       223 ---------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         223 ---------------QMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             ---------------cccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence                           023456888999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=4.3e-25  Score=182.30  Aligned_cols=164  Identities=24%  Similarity=0.467  Sum_probs=120.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCe---EEEEeecCc------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQT---VVSVRDFKP------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~---~vavK~l~~------------------------------------------   96 (268)
                      ++...+.||+|+||.||+|....++.   .+|+|.+..                                          
T Consensus         5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   84 (269)
T cd05065           5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT   84 (269)
T ss_pred             HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence            35567889999999999999865553   699994331                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.         
T Consensus        85 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~  161 (269)
T cd05065          85 EFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS  161 (269)
T ss_pred             ecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCccccccccCcc
Confidence                                 345778899999999999988   999999999999988766655 3321         


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                             ...++.++||||||++++|+++ |..||......  ..............       
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~--~~~~~i~~~~~~~~-------  232 (269)
T cd05065         162 DPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--DVINAIEQDYRLPP-------  232 (269)
T ss_pred             ccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCCcCCC-------
Confidence                                   1345678999999999999886 99998653221  11111111100000       


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                           +.+++..+.+++..||+.+|++||++.+|+..|+.+
T Consensus       233 ---------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         233 ---------------------PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             ---------------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence                                 013345678899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.92  E-value=6.2e-25  Score=180.81  Aligned_cols=164  Identities=25%  Similarity=0.409  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+ ..+|+|.+..                                            
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~   84 (262)
T cd05071           6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   84 (262)
T ss_pred             HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCC
Confidence            5677788999999999999998644 5699994331                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.||+|||+.+   ++|+||||+||+++.+...++ +|+.             
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~  161 (262)
T cd05071          85 GSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  161 (262)
T ss_pred             CcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccccccc
Confidence                             234678899999999999988   999999999999998877666 3321             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ...++.++|+||||++++|+++ |..||.......  ...........            ..   
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~~------------~~---  224 (262)
T cd05071         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYRM------------PC---  224 (262)
T ss_pred             CCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcCCCC------------CC---
Confidence                           1335678999999999999999 888886532211  10100000000            00   


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                   ....+..+.+++..||+.||++||+++++.+.|++.
T Consensus       225 -------------~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         225 -------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             -------------ccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence                         013456688999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=5.3e-25  Score=188.21  Aligned_cols=191  Identities=16%  Similarity=0.301  Sum_probs=123.2

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|.....||+|+||.||+|....++..||+|.+..                                         
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            345778888999999999999999988899999994421                                         


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                                .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+   
T Consensus        92 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  168 (343)
T cd07878          92 FNEVYLVTNLMGADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQA  168 (343)
T ss_pred             cCcEEEEeecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCccceec
Confidence                                      234568889999999999988   999999999999998887777 44421   


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhcchhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVLDPLF  202 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~  202 (268)
                                            ..++.++||||+|++++|+++|+.||....... .+..........  .....+....
T Consensus       169 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07878         169 DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEVLKKISSEH  247 (343)
T ss_pred             CCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhcchhh
Confidence                                  236778999999999999999999997532111 111111110000  0000000000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ........+........ .........+.+++..|++.||++|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         248 ARKYIQSLPHMPQQDLK-KIFRGANPLAIDLLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HHHHhhccccccchhHH-HhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00000000000000000 000011234678999999999999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.92  E-value=4.1e-25  Score=197.66  Aligned_cols=167  Identities=18%  Similarity=0.242  Sum_probs=132.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      .+....+.|.+|||+.||.+...+.+..+|+|                                                
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E  116 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE  116 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence            34456788999999999999998777999999                                                


Q ss_pred             -----------------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---
Q 044875           93 -----------------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---  145 (268)
Q Consensus        93 -----------------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---  145 (268)
                                             .|.+.+.++|+.|+++|+++||... ++|+|||||.+|+|+..+...|+ |||.   
T Consensus       117 vllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  117 VLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCccccccc
Confidence                                   2333678999999999999999986 88999999999999999988877 4443   


Q ss_pred             ------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh
Q 044875          146 ------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA  189 (268)
Q Consensus       146 ------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~  189 (268)
                                                          +.+.++|+|||++||++|-++....||++...-...-.+   ..
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~---Y~  272 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGN---YS  272 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEecc---cc
Confidence                                                345789999999999999999999999863211110000   00


Q ss_pred             CccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          190 VPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       190 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      +|.                              .......+..|+..|++.||++||++-+|+..+-++..+
T Consensus       273 ~P~------------------------------~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~  314 (738)
T KOG1989|consen  273 FPP------------------------------FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK  314 (738)
T ss_pred             CCC------------------------------CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence            111                              116677789999999999999999999999888887643

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3e-25  Score=185.56  Aligned_cols=159  Identities=23%  Similarity=0.304  Sum_probs=118.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            367778899999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||+|||+.+   ++||||||+||+++.++..++ +|+..         
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~  157 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWT  157 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCCccc
Confidence                                234668889999999999988   999999999999998887776 44432         


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                     ..++.++||||||+++||+++|+.||......  ........... .++                
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~-~~~----------------  218 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF--GIYEKILAGKL-EFP----------------  218 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCc-CCC----------------
Confidence                           33577899999999999999999999753211  11111110000 000                


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                                  ......+.+++..||+.||.+||+     +++++.
T Consensus       219 ------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         219 ------------RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             ------------ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence                        012334778999999999999995     777763

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.92  E-value=2.8e-25  Score=188.88  Aligned_cols=158  Identities=22%  Similarity=0.248  Sum_probs=117.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            567778899999999999999988899999993321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..         
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~  174 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFT  174 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCCcce
Confidence                                234557789999999999988   999999999999999887777 44432         


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                     ..++.++|||||||++||+++|+.||.+....  ........... .++.               
T Consensus       175 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~i~~~~~-~~p~---------------  236 (329)
T PTZ00263        175 LCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPF--RIYEKILAGRL-KFPN---------------  236 (329)
T ss_pred             ecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHH--HHHHHHhcCCc-CCCC---------------
Confidence                           34678899999999999999999999742211  11111100000 0000               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVV  252 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~  252 (268)
                                   ....++.+++..||+.||.+||+     +++++
T Consensus       237 -------------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        237 -------------WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             -------------CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence                         12234678999999999999997     56665

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=3.8e-25  Score=183.80  Aligned_cols=175  Identities=22%  Similarity=0.351  Sum_probs=122.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecC----CCeEEEEeecCc-----------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDP----DQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~----~~~~vavK~l~~-----------------------------------------   96 (268)
                      .|...+.||+|+||.||+|.+..    ++..+|+|.+..                                         
T Consensus         5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~   84 (284)
T cd05038           5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLR   84 (284)
T ss_pred             hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceE
Confidence            45556889999999999999743    378899994321                                         


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.||+|||+.+   ++|+||||+||+++.+...++ +|+.      
T Consensus        85 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  161 (284)
T cd05038          85 LIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKVLPE  161 (284)
T ss_pred             EEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccccccc
Confidence                                    234678899999999999988   999999999999998876666 3321      


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc----cchhhh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP----DQISEV  197 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~  197 (268)
                                              ...++.++|+||||++++|+++|+.|+.........   +......    ..+.+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~  238 (284)
T cd05038         162 DKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLEL  238 (284)
T ss_pred             CCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHHH
Confidence                                    133566899999999999999999887643221110   0000000    001111


Q ss_pred             cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          198 LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       198 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      +......                .....++.++.+++.+||+.+|++||++.+|+++|+.+
T Consensus       239 ~~~~~~~----------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         239 LKEGERL----------------PRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHcCCcC----------------CCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            1100000                00113456789999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=3.9e-25  Score=186.66  Aligned_cols=147  Identities=22%  Similarity=0.322  Sum_probs=108.8

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|+||.||++....++..+|+|.+..                                                    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            6999999999999988899999994321                                                    


Q ss_pred             ------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------
Q 044875           97 ------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------  146 (268)
Q Consensus        97 ------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------  146 (268)
                                  .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..                 
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~  157 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTP  157 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCc
Confidence                        344568889999999999988   999999999999998887776 44422                 


Q ss_pred             ----------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHH
Q 044875          147 ----------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE  216 (268)
Q Consensus       147 ----------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  216 (268)
                                ..++.++||||+|++++|+++|+.||......     ...........          ..          
T Consensus       158 ~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~-----~~~~~~~~~~~----------~~----------  212 (312)
T cd05585         158 EYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN-----EMYRKILQEPL----------RF----------  212 (312)
T ss_pred             ccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH-----HHHHHHHcCCC----------CC----------
Confidence                      23677899999999999999999999742211     11111110000          00          


Q ss_pred             hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH
Q 044875          217 NIKKGQIQESLITILKIRVVCSIKSPQERMDTS  249 (268)
Q Consensus       217 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~  249 (268)
                            +......+.+++..||+.||.+||++.
T Consensus       213 ------~~~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         213 ------PDGFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             ------CCcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence                  002234577889999999999998653

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.92  E-value=4.3e-25  Score=183.68  Aligned_cols=125  Identities=26%  Similarity=0.469  Sum_probs=91.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+..                             ..+
T Consensus       127 ~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05090         127 LHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKF  203 (283)
T ss_pred             HHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCC
Confidence            457889999999999988   999999999999998877766 33322                             345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++|+||||++++|+++ |..||.....  ..+.+.........            ..                ..+..
T Consensus       204 ~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~------------~~----------------~~~~~  253 (283)
T cd05090         204 SSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMVRKRQLLP------------CS----------------EDCPP  253 (283)
T ss_pred             CchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCCcCC------------CC----------------CCCCH
Confidence            778999999999999998 8888864221  11112111111100            00                02345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      ++.+++..||+.||++||++.+|.+.|..
T Consensus       254 ~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         254 RMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            67889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.92  E-value=8.3e-25  Score=187.02  Aligned_cols=129  Identities=22%  Similarity=0.403  Sum_probs=93.2

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~~  150 (268)
                      .++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+..                             ..++
T Consensus       183 ~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  259 (343)
T cd05103         183 CYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  259 (343)
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCC
Confidence            46779999999999988   999999999999998877776 44321                             2356


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++|+||||+++||+++ |..||....... ..............+.                            ....+
T Consensus       260 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~----------------------------~~~~~  310 (343)
T cd05103         260 IQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPD----------------------------YTTPE  310 (343)
T ss_pred             chhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHHhccCCCCCCC----------------------------CCCHH
Confidence            78999999999999997 888987532211 1111111110000000                            11235


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      +.+++..||+.||++|||+.+|++.|+.+.++
T Consensus       311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            78999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.92  E-value=2.5e-25  Score=185.76  Aligned_cols=185  Identities=16%  Similarity=0.290  Sum_probs=121.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..||+|.+..                                            
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            567778899999999999999988899999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||+|||+.+   ++||||||+||+++.+...++ |||..           
T Consensus        85 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~  161 (288)
T cd07871          85 LDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYS  161 (288)
T ss_pred             CCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCCcccc
Confidence                              234567889999999999988   999999999999998877776 33321           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-h--Cccchhhhcchh-hhcC
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-A--VPDQISEVLDPL-FVAG  205 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~d~~-~~~~  205 (268)
                                       ..++.++||||+|+++||+++|+.||....... .+...... .  .....+...+.. ....
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07871         162 NEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEEFRSY  240 (288)
T ss_pred             CceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccchhhhcc
Confidence                             246778999999999999999999997532211 11111111 1  111111111100 0000


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .......  ....  ........+..+++..|++.||.+|||++++++
T Consensus       241 ~~~~~~~--~~~~--~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         241 LFPQYRA--QPLI--NHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ccCccCC--CchH--HhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0000000  0000  000112345678999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=5.4e-25  Score=189.15  Aligned_cols=112  Identities=22%  Similarity=0.352  Sum_probs=92.4

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec--------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF--------------------------------------------   94 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l--------------------------------------------   94 (268)
                      ...+|...+.||+|+||.||+|....++..||+|..                                            
T Consensus        64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l  143 (357)
T PHA03209         64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSSDL  143 (357)
T ss_pred             hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCCcH
Confidence            346799999999999999999999888889999921                                            


Q ss_pred             -----------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------------------
Q 044875           95 -----------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------------  144 (268)
Q Consensus        95 -----------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------------  144 (268)
                                 ++.....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+                  
T Consensus       144 ~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~  220 (357)
T PHA03209        144 YTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTV  220 (357)
T ss_pred             HHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccc
Confidence                       11345788999999999999988   999999999999998777666 333                  


Q ss_pred             --------cCCCcCccccEeechHHHHHHHhCCCCCC
Q 044875          145 --------MGNQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       145 --------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                              ....++.++||||||+++||++++..|+.
T Consensus       221 ~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f  257 (357)
T PHA03209        221 ETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF  257 (357)
T ss_pred             cccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence                    22456789999999999999998655543

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.92  E-value=4.5e-25  Score=186.56  Aligned_cols=152  Identities=22%  Similarity=0.361  Sum_probs=112.0

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|....+++.||+|.+..                                                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+              
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  157 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCcccccc
Confidence                           234567899999999999988   999999999999998877776 44422              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++||||||+++||+++|+.||.......  +........ ...+                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~--~~~~i~~~~-~~~~------------------  216 (316)
T cd05592         158 GTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE--LFDSILNDR-PHFP------------------  216 (316)
T ss_pred             CCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHcCC-CCCC------------------
Confidence                         346788999999999999999999997532211  111110000 0000                  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH-HHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS-DVV  252 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-~v~  252 (268)
                                .....++.+++..||+.||++||++. ++.
T Consensus       217 ----------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         217 ----------RWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             ----------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                      02234567888999999999999975 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.92  E-value=2.4e-25  Score=181.89  Aligned_cols=112  Identities=29%  Similarity=0.469  Sum_probs=98.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec---------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF---------------------------------------------   94 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l---------------------------------------------   94 (268)
                      .++|...++||+|+||.||.++-.++++.+|+|.+                                             
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            37899999999999999999999999999999933                                             


Q ss_pred             -------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           95 -------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        95 -------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                         ++......+..++.||.|||+.+   |+||||||+|||++.++..++ ||++         
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence                               22445667889999999999999   999999999999999998888 3433         


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                        ...|+..+|-||+|+++|||++|.+||..
T Consensus       181 ~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~  227 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYA  227 (357)
T ss_pred             ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcC
Confidence                              35689999999999999999999999985

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.92  E-value=4.7e-25  Score=189.71  Aligned_cols=113  Identities=24%  Similarity=0.395  Sum_probs=95.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....++..+|+|.+..                                           
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~   99 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ   99 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence            4788888999999999999999988899999995421                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+      
T Consensus       100 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~  176 (359)
T cd07876         100 DVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN  176 (359)
T ss_pred             eeEEEEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence                                   123457889999999999988   999999999999998887777 44422      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                          ..++.++||||+|+++||+++|+.||...
T Consensus       177 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~  225 (359)
T cd07876         177 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT  225 (359)
T ss_pred             ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence                                34677899999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=6.9e-25  Score=187.68  Aligned_cols=160  Identities=19%  Similarity=0.328  Sum_probs=125.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeec-----------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF-----------------------------------------------   94 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l-----------------------------------------------   94 (268)
                      .|..-.++|+|+.|.||.+.-..+++.||||++                                               
T Consensus       274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~  353 (550)
T KOG0578|consen  274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME  353 (550)
T ss_pred             hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence            455667899999999999999889999999933                                               


Q ss_pred             -------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           95 -------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        95 -------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                   ++.....+++++++||+|||..+   |+|||||+.|||+..++..|+ |||+.              
T Consensus       354 ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmV  430 (550)
T KOG0578|consen  354 GGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMV  430 (550)
T ss_pred             CCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccCcccccc
Confidence                         22567889999999999999999   999999999999999998888 55543              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-chhhhcchhhhcCCCccchh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ..|+.|+||||+|++++||+-|++||....+- ..++-.+..+.+. +.++                
T Consensus       431 GTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Pl-rAlyLIa~ng~P~lk~~~----------------  493 (550)
T KOG0578|consen  431 GTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-RALYLIATNGTPKLKNPE----------------  493 (550)
T ss_pred             CCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChH-HHHHHHhhcCCCCcCCcc----------------
Confidence                         45899999999999999999999999852221 1122222222222 2122                


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  .....+-++..+|++.|+++||+++|+++
T Consensus       494 ------------klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  494 ------------KLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             ------------ccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence                        23345677788899999999999999984

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.92  E-value=3.2e-25  Score=188.11  Aligned_cols=153  Identities=21%  Similarity=0.320  Sum_probs=113.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            46667889999999999999988889999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..         
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT  157 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc
Confidence                                334567889999999999988   999999999999998877766 44421         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++|+||+|+++||+++|+.||......  ........... ..+             
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~~~~-~~~-------------  221 (324)
T cd05587         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIMEHNV-SYP-------------  221 (324)
T ss_pred             eeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCC-CCC-------------
Confidence                              34677899999999999999999999753221  11111100000 000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                     .....++.+++..||+.||.+||+.
T Consensus       222 ---------------~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         222 ---------------KSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             ---------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence                           0223457788899999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=5e-25  Score=200.27  Aligned_cols=130  Identities=27%  Similarity=0.434  Sum_probs=102.5

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------------------------
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------------------------  146 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------------------------  146 (268)
                      ..+.++.|||.|+.||++.+   ++||||.++|||+..+...++ |||++                              
T Consensus       419 dLlsfa~QIa~GMe~L~~~~---~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~  495 (609)
T KOG0200|consen  419 DLLSFAYQIANGMEYLASVP---CVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD  495 (609)
T ss_pred             HHHHHHHHHHHHHHHHhhCC---ccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc
Confidence            35789999999999999987   999999999999999988888 44433                              


Q ss_pred             CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          147 NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       147 ~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      ..|+.++||||||+++||++| |..||++..... .+.++.+.+.                            +.+.+..
T Consensus       496 ~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~-~l~~~l~~G~----------------------------r~~~P~~  546 (609)
T KOG0200|consen  496 RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTE-ELLEFLKEGN----------------------------RMEQPEH  546 (609)
T ss_pred             CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHH-HHHHHHhcCC----------------------------CCCCCCC
Confidence            357899999999999999999 999998632111 1122222222                            2223336


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      |..+++.+|..||+.+|++||++.++++.++...
T Consensus       547 c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l  580 (609)
T KOG0200|consen  547 CSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL  580 (609)
T ss_pred             CCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence            6788999999999999999999999999998854

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=1.1e-24  Score=179.93  Aligned_cols=168  Identities=19%  Similarity=0.346  Sum_probs=122.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecC------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFK------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|.....   ...+++|...                                          
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~   85 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVM   85 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEE
Confidence            4567778999999999999987533   3468888222                                          


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec----------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG----------  144 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~----------  144 (268)
                                          ......++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+          
T Consensus        86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          86 ELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeecccccc
Confidence                                1345678899999999999988   999999999999998776665 222          


Q ss_pred             ------------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          145 ------------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       145 ------------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                        ....++.++||||||++++|+++ |..||.......  .............           
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~~~~~-----------  229 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGERLPM-----------  229 (270)
T ss_pred             eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCCcCCC-----------
Confidence                              12345678999999999999986 999987532211  1111111110000           


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                       +..++..+.+++.+||..+|++|||+.+++..|+++.++
T Consensus       230 -----------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         230 -----------------PPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             -----------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                             013345688899999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.92  E-value=5e-25  Score=180.77  Aligned_cols=161  Identities=22%  Similarity=0.375  Sum_probs=117.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||.|... ++..+|+|.+..                                             
T Consensus         5 ~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05113           5 DLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSN   83 (256)
T ss_pred             HeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence            4555678999999999999886 455689983221                                             


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.              
T Consensus        84 ~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05113          84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG  160 (256)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence                            245779999999999999988   999999999999998877666 3321              


Q ss_pred             --------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    +..++.++||||||+++||+++ |..|+......  .............            ..   
T Consensus       161 ~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~---  223 (256)
T cd05113         161 SKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQGLRLY------------RP---  223 (256)
T ss_pred             CccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcCCCCC------------CC---
Confidence                          1345778999999999999998 99888643221  1111111110000            00   


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                   ......+.+++..||+.+|.+||++.+++..|+
T Consensus       224 -------------~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         224 -------------HLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             -------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence                         022356888999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.92  E-value=6.5e-25  Score=182.16  Aligned_cols=124  Identities=31%  Similarity=0.508  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                             +..+
T Consensus       125 ~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05049         125 LQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKF  201 (280)
T ss_pred             HHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCc
Confidence            457889999999999988   999999999999988776665 3321                             2345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..||......  ..............            .                ...+.
T Consensus       202 ~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~~~~~~~~------------~----------------~~~~~  251 (280)
T cd05049         202 TTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECITQGRLLQR------------P----------------RTCPS  251 (280)
T ss_pred             chhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCcCCC------------C----------------CCCCH
Confidence            778999999999999998 99998643221  11111111100000            0                02345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      .+.+++..||+.||++||++.+|++.|+
T Consensus       252 ~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         252 EVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            6889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=1.2e-24  Score=181.19  Aligned_cols=179  Identities=20%  Similarity=0.356  Sum_probs=120.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ..|...+.||+|+||.||.+.+    ..++..+|+|.+..                                        
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3456778899999999999985    34678899994431                                        


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------  144 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------  144 (268)
                                               .....++.+++.+|+|||+.+   ++||||||+||+++.+...++ +|+      
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccccc
Confidence                                     335678899999999999988   999999999999988776665 222      


Q ss_pred             ------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcc
Q 044875          145 ------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLD  199 (268)
Q Consensus       145 ------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d  199 (268)
                                              .+..++.++|+||||++++|+++++.|.......   ......... .........
T Consensus       161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  237 (284)
T cd05079         161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHGQMTVTRLVR  237 (284)
T ss_pred             cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccccccHHHHHH
Confidence                                    1234677899999999999999987664321110   000000000 000000000


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      . +...            .........+..+.+++..||+.||++|||+.+++..|+++
T Consensus       238 ~-~~~~------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         238 V-LEEG------------KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             H-HHcC------------ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            0 0000            00000113456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=6.9e-25  Score=183.80  Aligned_cols=162  Identities=19%  Similarity=0.319  Sum_probs=119.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|....++..+++|.+..                                            
T Consensus        20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~   99 (296)
T cd06654          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (296)
T ss_pred             cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence            467777889999999999999887889999993321                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.              
T Consensus       100 ~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  176 (296)
T cd06654         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  176 (296)
T ss_pred             CCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccccccCcc
Confidence                            345678889999999999988   999999999999998877766 3332              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ...++.++||||||++++|+++|+.||........ .........+    ..-.             
T Consensus       177 ~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~~~~----~~~~-------------  238 (296)
T cd06654         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTP----ELQN-------------  238 (296)
T ss_pred             cCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcCCCC----CCCC-------------
Confidence                         12356789999999999999999999975322111 1111100000    0000             


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                +......+.+++.+||+.||++||++.++++
T Consensus       239 ----------~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         239 ----------PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             ----------ccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence                      0023345788999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=1.3e-24  Score=180.55  Aligned_cols=166  Identities=23%  Similarity=0.396  Sum_probs=119.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....+++.+|+|.+..                                             
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   81 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM   81 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence            56667889999999999999988899999994321                                             


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------  145 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------  145 (268)
                                   .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                 
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  158 (279)
T cd06619          82 DGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNA  158 (279)
T ss_pred             CCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChh
Confidence                         234578899999999999988   999999999999998877776 3332                 


Q ss_pred             --------CCCcCccccEeechHHHHHHHhCCCCCCcccccccch--hhHhhhhCccchhhhcchhhhcCCCccchhhhH
Q 044875          146 --------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL--HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAE  215 (268)
Q Consensus       146 --------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  215 (268)
                              ...++.++|+||||+++||+++|+.||..........  ...........     .+.+..           
T Consensus       159 y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-----------  222 (279)
T cd06619         159 YMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPV-----------  222 (279)
T ss_pred             hcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCC-----------
Confidence                    2346788999999999999999999997533221110  01000000000     000000           


Q ss_pred             HhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          216 ENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                              .....++.+++..||+.+|+.||+++++++.
T Consensus       223 --------~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         223 --------GQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             --------CcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence                    0223457889999999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.92  E-value=4.4e-25  Score=182.02  Aligned_cols=165  Identities=18%  Similarity=0.259  Sum_probs=118.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...+++.+|+|.+..                                            
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~   88 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC   88 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence            567788999999999999999988899999994321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+|++|+||+++.++..++ ||+.             
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06646          89 GGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKS  165 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccccccCc
Confidence                             234567889999999999988   999999999999998876666 3321             


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ...++.++|+||||++++|+++|+.|+......... ..+......       .+....    
T Consensus       166 ~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~-~~~~~~~~~-------~~~~~~----  233 (267)
T cd06646         166 FIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRAL-FLMSKSNFQ-------PPKLKD----  233 (267)
T ss_pred             cccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhh-eeeecCCCC-------CCCCcc----
Confidence                             122456899999999999999999998643221110 000000000       000000    


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                    .......+.+++..||+.+|++||+++++++.
T Consensus       234 --------------~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         234 --------------KTKWSSTFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             --------------ccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence                          00223467889999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.92  E-value=5e-25  Score=189.24  Aligned_cols=114  Identities=23%  Similarity=0.373  Sum_probs=95.4

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||++.....++.+|+|.+..                                          
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   94 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF   94 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence            34788888999999999999999988899999994431                                          


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+     
T Consensus        95 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~~~~~~~  171 (355)
T cd07874          95 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_pred             ceeEEEhhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcccccCCC
Confidence                                    223457889999999999988   999999999999998887777 44432     


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                           ..++.++||||||++++|+++|+.||...
T Consensus       172 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  221 (355)
T cd07874         172 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR  221 (355)
T ss_pred             ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                                 34678899999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=9.4e-25  Score=178.97  Aligned_cols=163  Identities=26%  Similarity=0.436  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||.|+||.||+|...  ++.+|+|.+..                                            
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   83 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA   83 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence            56777789999999999999984  78899993322                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                        .....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +++             
T Consensus        84 ~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~  160 (256)
T cd05039          84 KGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK  160 (256)
T ss_pred             CCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence                              235678899999999999988   999999999999998877766 332             


Q ss_pred             -----------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          145 -----------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       145 -----------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                 ....++.++|+||||++++|+++ |..||......  .+............                  
T Consensus       161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~------------------  220 (256)
T cd05039         161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEKGYRMEA------------------  220 (256)
T ss_pred             CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhcCCCCCC------------------
Confidence                       12345678999999999999997 99888643211  11111111100000                  


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                +...+..+.+++.+||+.+|++|||++++++.|+.+
T Consensus       221 ----------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         221 ----------PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             ----------ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence                      012345688899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=1e-24  Score=181.10  Aligned_cols=171  Identities=19%  Similarity=0.416  Sum_probs=125.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe----EEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..++.    .+|+|.+..                                        
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v   86 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI   86 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence            456677889999999999999865544    588883321                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.|++|||+.+   ++|+||+|+||+++.+...++ +|+.        
T Consensus        87 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~  163 (279)
T cd05057          87 TQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDE  163 (279)
T ss_pred             EecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccCcc
Confidence                                  345778899999999999987   999999999999988777666 3321        


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           ...++.++|+||||++++|+++ |+.||......  .+.+..........+        
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~--------  233 (279)
T cd05057         164 KEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGERLPQP--------  233 (279)
T ss_pred             cceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCCCCCCC--------
Confidence                                 1345678999999999999998 99998753221  111111111110000        


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                          ..+...+..++..||..||.+||++.++++.|+.+.+...|
T Consensus       234 --------------------~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~~  274 (279)
T cd05057         234 --------------------PICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQR  274 (279)
T ss_pred             --------------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCcc
Confidence                                02234578889999999999999999999999998766544

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.91  E-value=7.6e-25  Score=185.60  Aligned_cols=153  Identities=23%  Similarity=0.330  Sum_probs=113.0

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|+...+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..              
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFC  157 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCCccccccc
Confidence                           234568899999999999988   999999999999998887776 44422              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++||||||+++||+++|+.||.......  .......... ..+                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~--~~~~i~~~~~-~~p------------------  216 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD--LFESILHDDV-LYP------------------  216 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCC-CCC------------------
Confidence                         346788999999999999999999997532211  1111000000 000                  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-------ChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERM-------DTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-------s~~~v~~  253 (268)
                                .....++.+++..|++.||++||       ++.++++
T Consensus       217 ----------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         217 ----------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             ----------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence                      01234577889999999999999       6666653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.91  E-value=1.4e-24  Score=179.42  Aligned_cols=127  Identities=25%  Similarity=0.415  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------------------CCcCcc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------------------NQFSTN  152 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------------------~~~~~~  152 (268)
                      ..++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+..                          ..++.+
T Consensus       115 ~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~  191 (270)
T cd05047         115 LHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTN  191 (270)
T ss_pred             HHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCch
Confidence            667889999999999988   999999999999998877766 44322                          345678


Q ss_pred             ccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHH
Q 044875          153 GDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITIL  231 (268)
Q Consensus       153 ~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (268)
                      +|+||||++++|+++ |..||......  .............            .                .......+.
T Consensus       192 ~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~~~~------------~----------------~~~~~~~~~  241 (270)
T cd05047         192 SDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGYRLE------------K----------------PLNCDDEVY  241 (270)
T ss_pred             hhHHHHHHHHHHHHcCCCCCccccCHH--HHHHHHhCCCCCC------------C----------------CCcCCHHHH
Confidence            999999999999997 99998643211  1111110000000            0                002334588


Q ss_pred             HHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          232 KIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       232 ~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      +++..||+.||.+|||+.++++.|+++.
T Consensus       242 ~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         242 DLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            9999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=1.2e-24  Score=182.89  Aligned_cols=129  Identities=22%  Similarity=0.394  Sum_probs=93.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.                             +..+
T Consensus       140 ~~~~~qi~~al~~LH~~g---ivH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  216 (304)
T cd05101         140 VSCTYQVARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVY  216 (304)
T ss_pred             HHHHHHHHHHHHHHHHCC---eeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCC
Confidence            456789999999999988   999999999999987776665 3321                             2336


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..|+......  .+..........            ..                +..++.
T Consensus       217 ~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------------~~----------------~~~~~~  266 (304)
T cd05101         217 THQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRM------------DK----------------PANCTN  266 (304)
T ss_pred             CchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHcCCcC------------CC----------------CCCCCH
Confidence            778999999999999998 77787642211  111111100000            00                013455


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .+.+++..||+.+|++|||+.++++.|+++..-
T Consensus       267 ~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         267 ELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             HHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            688899999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.91  E-value=1.4e-24  Score=178.37  Aligned_cols=163  Identities=23%  Similarity=0.435  Sum_probs=119.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|.....||+|+||.||+|.+.. +..+|+|.+..                                            
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK   84 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcC-CceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence            456667889999999999999864 44688883321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+..            
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  161 (260)
T cd05069          85 GSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQ  161 (260)
T ss_pred             CCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcccccC
Confidence                             234678889999999999988   999999999999998877766 33321            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..++.++|+||||++++|+++ |..||.+.....  ............            .   
T Consensus       162 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~~------------~---  224 (260)
T cd05069         162 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYRMP------------C---  224 (260)
T ss_pred             CCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCCC------------C---
Confidence                            234668999999999999999 888987532211  111111111000            0   


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                   +...+..+.+++.+||+.||++||++++|.+.|++
T Consensus       225 -------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         225 -------------PQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             -------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence                         01334568889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=7e-25  Score=181.70  Aligned_cols=163  Identities=24%  Similarity=0.432  Sum_probs=120.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....     .+..+|+|.+..                                       
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~   85 (277)
T cd05032           6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL   85 (277)
T ss_pred             HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence            567777899999999999998753     347899993321                                       


Q ss_pred             ---------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-e
Q 044875           97 ---------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-E  142 (268)
Q Consensus        97 ---------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e  142 (268)
                                                       .....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~d  162 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIGD  162 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEECC
Confidence                                             124567889999999999988   999999999999998887776 3


Q ss_pred             ecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCcc
Q 044875          143 YGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       143 ~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                      |+.                             ...++.++||||||++++|+++ |..||......  ............
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~  240 (277)
T cd05032         163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNE--EVLKFVIDGGHL  240 (277)
T ss_pred             cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHH--HHHHHHhcCCCC
Confidence            332                             1345778999999999999998 88888642221  111111111000


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ..+                            ..++..+.+++..||+.+|++|||+.++++.|+
T Consensus       241 ~~~----------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         241 DLP----------------------------ENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCC----------------------------CCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            000                            023456889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.6e-24  Score=178.15  Aligned_cols=162  Identities=18%  Similarity=0.289  Sum_probs=119.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            578888999999999999999987899999984321                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+..       
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~  158 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQTIC  158 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceeccccc
Confidence                                  234567889999999999988   999999999999998776665 33321       


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                             ..++.++||||+|+++||+++|+.||........ .............         
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~---------  228 (263)
T cd06625         159 SSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAA-IFKIATQPTNPQL---------  228 (263)
T ss_pred             cccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHH-HHHHhccCCCCCC---------
Confidence                                   2356789999999999999999999864311100 0000000000000         


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                         +......+.+++..||+.+|.+||++.++++.
T Consensus       229 -------------------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         229 -------------------PSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             -------------------CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence                               01334457889999999999999999999863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.91  E-value=5.8e-25  Score=183.63  Aligned_cols=172  Identities=24%  Similarity=0.374  Sum_probs=126.4

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      +...++..++++|...+.||+|+||.||++....+++.+|+|.+..                                  
T Consensus        12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            4556777888999999999999999999999988899999993321                                  


Q ss_pred             ------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCcee
Q 044875           97 ------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH  140 (268)
Q Consensus        97 ------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~  140 (268)
                                                          .....++.+++.|+.|||+.+   ++|+||||+||+++.+...+
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~k  168 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGVK  168 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEE
Confidence                                                123457889999999999987   99999999999999887776


Q ss_pred             e-eeccC--------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh
Q 044875          141 V-EYGMG--------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK  187 (268)
Q Consensus       141 i-e~~~~--------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~  187 (268)
                      + +|+..                                ..++.++|+||||+++||+++|+.|+........ +.....
T Consensus       169 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~-~~~~~~  247 (291)
T cd06639         169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT-LFKIPR  247 (291)
T ss_pred             EeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH-HHHHhc
Confidence            6 33311                                0146789999999999999999999875322111 111100


Q ss_pred             hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          188 MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       188 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      . .+   ....++                       ......+.+++..||+.+|++||++.++++
T Consensus       248 ~-~~---~~~~~~-----------------------~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         248 N-PP---PTLLHP-----------------------EKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             C-CC---CCCCcc-----------------------cccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            0 00   000000                       022345888999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=7.3e-25  Score=185.85  Aligned_cols=153  Identities=22%  Similarity=0.347  Sum_probs=113.1

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------------   95 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------------   95 (268)
                      +.||+|+||.||++....++..+|+|.+.                                                   
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            36899999999999998889999999332                                                   


Q ss_pred             -------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------------
Q 044875           96 -------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------------  144 (268)
Q Consensus        96 -------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------------  144 (268)
                                   +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+                 
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  157 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCG  157 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccC
Confidence                         1345678899999999999988   999999999999998877766 333                 


Q ss_pred             ----------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          145 ----------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       145 ----------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                .+..++.++||||||+++||+++|+.||.......  ......... ..++                   
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~--~~~~~~~~~-~~~p-------------------  215 (323)
T cd05595         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER--LFELILMEE-IRFP-------------------  215 (323)
T ss_pred             CcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHhcCC-CCCC-------------------
Confidence                      12346788999999999999999999997432211  000000000 0000                   


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                               ......+.+++..||+.||++||     ++.++++
T Consensus       216 ---------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         216 ---------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             ---------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence                     02234577889999999999998     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.91  E-value=6.8e-25  Score=185.67  Aligned_cols=153  Identities=22%  Similarity=0.323  Sum_probs=114.0

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.               
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFC  157 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccccee
Confidence                           344668889999999999988   999999999999998877766 4442               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++|+|||||++||+++|+.||......  ........... ..                   
T Consensus       158 g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~--~~~~~i~~~~~-~~-------------------  215 (318)
T cd05570         158 GTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDED--ELFQSILEDEV-RY-------------------  215 (318)
T ss_pred             cCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHH--HHHHHHHcCCC-CC-------------------
Confidence                        234678899999999999999999999743211  11110000000 00                   


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh-----HHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDT-----SDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~-----~~v~~  253 (268)
                               +......+.+++..||+.||.+||++     .+++.
T Consensus       216 ---------~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         216 ---------PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             ---------CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence                     00234457889999999999999999     77653

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.91  E-value=1.1e-24  Score=181.04  Aligned_cols=125  Identities=28%  Similarity=0.432  Sum_probs=91.2

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~  148 (268)
                      ...++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.                             ...
T Consensus       124 ~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  200 (280)
T cd05092         124 MLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK  200 (280)
T ss_pred             HHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCC
Confidence            4567889999999999988   999999999999998877776 3332                             133


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++||||||+++||+++ |..||.......  .........+...                            +..++
T Consensus       201 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~~----------------------------~~~~~  250 (280)
T cd05092         201 FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECITQGRELER----------------------------PRTCP  250 (280)
T ss_pred             cCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHHcCccCCC----------------------------CCCCC
Confidence            5778999999999999998 888886432211  1111111100000                            00234


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ..+.+++..||+.||++||++.+|...|+
T Consensus       251 ~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         251 PEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            55889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=1.2e-24  Score=178.19  Aligned_cols=162  Identities=25%  Similarity=0.386  Sum_probs=119.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+++|.+..                                            
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   82 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGA   82 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCC
Confidence            678888999999999999999987789999994332                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +++.              
T Consensus        83 ~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (256)
T cd06612          83 GSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTV  159 (256)
T ss_pred             CcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCccccccc
Confidence                            334678899999999999988   999999999999998877766 2321              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   +..++.++||||||++++|+++|+.|+...........  ......    ..++             
T Consensus       160 ~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~----~~~~-------------  220 (256)
T cd06612         160 IGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM--IPNKPP----PTLS-------------  220 (256)
T ss_pred             cCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh--hccCCC----CCCC-------------
Confidence                         23456789999999999999999999875322211000  000000    0000             


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                               ........+.+++..||+.||++|||+.++++
T Consensus       221 ---------~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         221 ---------DPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             ---------chhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence                     00123356788999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.91  E-value=7.7e-25  Score=179.31  Aligned_cols=162  Identities=28%  Similarity=0.485  Sum_probs=119.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|..  .+..+|+|.+..                                            
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~   83 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG   83 (254)
T ss_pred             HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence            3466778899999999999986  577899983321                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|+.|||+.+   ++|||+||+||+++.++..++ ||+.              
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (254)
T cd05083          84 NLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP  160 (254)
T ss_pred             CHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence                            234678889999999999988   999999999999998777766 3331              


Q ss_pred             ----------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          146 ----------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       146 ----------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                ...++.++|+||||++++|+++ |+.||.......  ............            .        
T Consensus       161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~~~~------------~--------  218 (254)
T cd05083         161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE--VKECVEKGYRME------------P--------  218 (254)
T ss_pred             ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhCCCCCC------------C--------
Confidence                      2456778999999999999998 898887532211  111111111000            0        


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                              ....+..+.+++..||+.+|+.||+++++++.|++
T Consensus       219 --------~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         219 --------PEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             --------CCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence                    01334567889999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.91  E-value=7.1e-25  Score=188.93  Aligned_cols=114  Identities=23%  Similarity=0.392  Sum_probs=95.5

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||++.....++.+|+|.+..                                          
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~  101 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  101 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence            34788888999999999999999988899999995431                                          


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+     
T Consensus       102 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~  178 (364)
T cd07875         102 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  178 (364)
T ss_pred             CeEEEEEeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCCccccCC
Confidence                                    123457889999999999988   999999999999998887777 44432     


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                           ..++.++|||||||++||+++|+.||...
T Consensus       179 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  228 (364)
T cd07875         179 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT  228 (364)
T ss_pred             CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence                                 34577899999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.91  E-value=9.6e-25  Score=184.58  Aligned_cols=152  Identities=22%  Similarity=0.369  Sum_probs=112.4

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|....++..+|+|.+..                                                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||+|||+.+   ++||||||+||+++.+...++ ||+..              
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccC
Confidence                           234567889999999999988   999999999999998877766 44421              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++||||+|+++||+++|+.||......  .+........+ ..+.                 
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~--~~~~~~~~~~~-~~~~-----------------  217 (316)
T cd05620         158 GTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED--ELFESIRVDTP-HYPR-----------------  217 (316)
T ss_pred             CCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCCC-----------------
Confidence                         34677899999999999999999999753221  11111111100 0000                 


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH-HHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS-DVV  252 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-~v~  252 (268)
                                 ....++.+++..||+.||++||++. ++.
T Consensus       218 -----------~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         218 -----------WITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             -----------CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence                       1234567889999999999999984 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.91  E-value=1.2e-24  Score=182.75  Aligned_cols=167  Identities=25%  Similarity=0.412  Sum_probs=120.6

Q ss_pred             hCCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~--------------------------------------   96 (268)
                      .++|...+.||+|+||.||++..     ..++..+|+|.+..                                      
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            35788889999999999999975     23456789883321                                      


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.+  
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~~~  190 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLARD  190 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccccc
Confidence                                       234668889999999999988   999999999999988776665 33321  


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhc
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVL  198 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (268)
                                                 ..++.++||||||+++||+++ |..||....... ............      
T Consensus       191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~------  263 (302)
T cd05055         191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKEGYRM------  263 (302)
T ss_pred             ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHcCCcC------
Confidence                                       234667999999999999998 999986432211 111111111000      


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                            ...                .....++.+++..||+.+|++|||+.++++.|+++
T Consensus       264 ------~~~----------------~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         264 ------AQP----------------EHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             ------CCC----------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence                  000                02234588899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.91  E-value=1.7e-24  Score=184.31  Aligned_cols=111  Identities=27%  Similarity=0.451  Sum_probs=92.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   84 (333)
T cd06650           5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH   84 (333)
T ss_pred             hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence            678888999999999999999988899999983221                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                        .....++.+++.|+.|||+. +   ++|+||||+||+++.+...++ +|+.+          
T Consensus        85 ~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~  161 (333)
T cd06650          85 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  161 (333)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcccc
Confidence                              23357788999999999974 5   999999999999998877776 44422          


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                     ..++.++|+|||||++||+++|+.||..
T Consensus       162 ~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         162 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                           3467789999999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.91  E-value=1.1e-24  Score=178.77  Aligned_cols=160  Identities=24%  Similarity=0.397  Sum_probs=117.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|.+. ++..+|+|.+..                                             
T Consensus         5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~   83 (256)
T cd05059           5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN   83 (256)
T ss_pred             HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence            4666788999999999999986 466789884321                                             


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|++|||+.+   ++|+|+||+||+++.++..++ +|+.              
T Consensus        84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence                            234678899999999999988   999999999999998877666 3321              


Q ss_pred             --------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    ...++.++|+||||+++||+++ |+.|+......  ...........        .    ..    
T Consensus       161 ~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~--------~----~~----  222 (256)
T cd05059         161 TKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAGYR--------L----YR----  222 (256)
T ss_pred             CCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcCCc--------C----CC----
Confidence                          2345678999999999999999 78888643211  11111111100        0    00    


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                  +...+..+.+++..||+.+|++|||+.++++.|
T Consensus       223 ------------~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         223 ------------PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             ------------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence                        012345689999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.91  E-value=1.1e-24  Score=185.27  Aligned_cols=153  Identities=22%  Similarity=0.366  Sum_probs=113.6

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....++..+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            358999999999999988899999994321                                                  


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------------  145 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------------  145 (268)
                                    .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.                
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  157 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCG  157 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccC
Confidence                          345678899999999999988   999999999999998877776 4442                


Q ss_pred             -----------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          146 -----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       146 -----------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                 +..++.++||||||+++||+++|+.||......     ..........      ..+            
T Consensus       158 t~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~-----~~~~~~~~~~------~~~------------  214 (328)
T cd05593         158 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----KLFELILMED------IKF------------  214 (328)
T ss_pred             CcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHH-----HHHHHhccCC------ccC------------
Confidence                       234578899999999999999999999753211     1111100000      000            


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                              +.....++.+++..||+.||++||     ++.++++
T Consensus       215 --------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         215 --------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             --------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence                    002234577888999999999997     7888774

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.91  E-value=7.2e-25  Score=178.61  Aligned_cols=187  Identities=19%  Similarity=0.312  Sum_probs=127.3

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...++||+|+||+||+|+...+|+.||+|.+..                                              
T Consensus        13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l   92 (323)
T KOG0594|consen   13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKL   92 (323)
T ss_pred             HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceE
Confidence            4444679999999999999999999999992211                                              


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....+..|+..|++|||+++   |+||||||.|+|++.++..|+ |||.+  
T Consensus        93 ~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   93 YLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             EEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccchHHH
Confidence                                       135678999999999999998   999999999999999988888 45433  


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-hhCcc--chhhh
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAVPD--QISEV  197 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~  197 (268)
                                                ..|++.+|+||+||++.||+++++-|++..... .+....+ .+.|.  .++..
T Consensus       170 ~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~-ql~~If~~lGtP~e~~Wp~v  248 (323)
T KOG0594|consen  170 FSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID-QLFRIFRLLGTPNEKDWPGV  248 (323)
T ss_pred             hcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH-HHHHHHHHcCCCCccCCCCc
Confidence                                      258899999999999999999988887654422 2222222 22221  22221


Q ss_pred             c---chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH--HHHhH
Q 044875          198 L---DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN--LQTVK  259 (268)
Q Consensus       198 ~---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~--L~~l~  259 (268)
                      .   +... .......+...     ............++..+|++.+|..|.|++.++..  +..+.
T Consensus       249 ~~~~~~k~-~f~~~~~~~~l-----~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  249 SSLPDYKA-PFPKWPGPKDL-----SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cccccccc-cCcCCCCccch-----HHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            1   1111 11111101110     00001111467888999999999999999998864  55543

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.91  E-value=1.3e-24  Score=181.43  Aligned_cols=168  Identities=23%  Similarity=0.372  Sum_probs=121.2

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc-------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP-------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~-------------------------------------   96 (268)
                      .+++|+..+.||+|+||.||+|...     ..+..+|+|.+..                                     
T Consensus         4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   83 (288)
T cd05061           4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP   83 (288)
T ss_pred             cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            4567888899999999999999763     2355799994321                                     


Q ss_pred             -----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           97 -----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        97 -----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                                                         .....++.+++.|+.|||+.+   ++||||||+||+++.+...++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEEE
Confidence                                               012457889999999999988   999999999999998777665


Q ss_pred             -eecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhC
Q 044875          142 -EYGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       142 -e~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                       +|+.                             ...++.++|+||||++++|+++ |..|+.....+  ..........
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~  238 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVMDGG  238 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC
Confidence             3332                             1345778999999999999998 78888642211  1111110000


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      ...            .                +..++..+.+++.+||+.||++|||+.++++.|++..
T Consensus       239 ~~~------------~----------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         239 YLD------------Q----------------PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCC------------C----------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            000            0                0123456899999999999999999999998887754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.91  E-value=1.8e-24  Score=181.05  Aligned_cols=131  Identities=23%  Similarity=0.343  Sum_probs=90.2

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~  148 (268)
                      ...++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                             ...
T Consensus       132 ~~~~~~~i~~al~~LH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  208 (296)
T cd05051         132 LLYMATQIASGMRYLESLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK  208 (296)
T ss_pred             HHHHHHHHHHHHHHHHHcC---ccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC
Confidence            3578899999999999988   999999999999998766665 3332                             134


Q ss_pred             cCccccEeechHHHHHHHh--CCCCCCcccccccchhhHhhhhCcc-chhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT--GKRSTSDMFTEGLGLHNFVKMAVPD-QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      ++.++||||||+++||+++  +..|+.......  ........... ......+                      .+..
T Consensus       209 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~----------------------~~~~  264 (296)
T cd05051         209 FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQ--VIENAGHFFRDDGRQIYLP----------------------RPPN  264 (296)
T ss_pred             CCccchhhhhHHHHHHHHhcCCCCCCCCcChHH--HHHHHHhccccccccccCC----------------------CccC
Confidence            6788999999999999998  666775422111  11111100000 0000000                      0012


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      .+.++.+++..||+.||++|||+.+|++.|+
T Consensus       265 ~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         265 CPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             CCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            3456899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.91  E-value=1.7e-24  Score=178.57  Aligned_cols=165  Identities=24%  Similarity=0.460  Sum_probs=120.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+   +..+|+|.+..                                         
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            4567778999999999999987433   34788884321                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.|+.|||+.+   ++|+||||+|++++.+...++ +|+.        
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  160 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence                                  235778899999999999988   999999999999988776665 3321        


Q ss_pred             ----------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          146 ----------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       146 ----------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                            ...++.++|+||||++++|+++ |..||.......  ...........  +       
T Consensus       161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~--~~~~~~~~~~~--~-------  229 (267)
T cd05066         161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD--VIKAIEEGYRL--P-------  229 (267)
T ss_pred             ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH--HHHHHhCCCcC--C-------
Confidence                                  1345678999999999999887 999987532211  11111111000  0       


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                         .                ....+..+.+++..||+.+|++||++.++++.|+++
T Consensus       230 ---~----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         230 ---A----------------PMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             ---C----------------CCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence               0                002345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=3.4e-24  Score=177.77  Aligned_cols=160  Identities=24%  Similarity=0.404  Sum_probs=118.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|+..+.||.|+||.||+|....++..+|+|.+..                                             
T Consensus         5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   84 (277)
T cd06640           5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL   84 (277)
T ss_pred             hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence            45566789999999999999987889999994331                                             


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------------  144 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------------  144 (268)
                                      .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+               
T Consensus        85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  161 (277)
T cd06640          85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTF  161 (277)
T ss_pred             CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccc
Confidence                            234567889999999999988   999999999999998776655 222               


Q ss_pred             ------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          145 ------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       145 ------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                  .+..++.++|+||||++++|+++|..|+........  ........++                    
T Consensus       162 ~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~~--------------------  219 (277)
T cd06640         162 VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV--LFLIPKNNPP--------------------  219 (277)
T ss_pred             cCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH--hhhhhcCCCC--------------------
Confidence                        223467789999999999999999999875322111  0000000000                    


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                              ......+..+.+++..||+.+|++||++.++++.
T Consensus       220 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         220 --------TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             --------CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence                    0111456678899999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.91  E-value=7.1e-25  Score=184.77  Aligned_cols=191  Identities=14%  Similarity=0.278  Sum_probs=123.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...++..+|+|.+..                                            
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            567778899999999999999988899999994431                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+           
T Consensus        86 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  162 (309)
T cd07872          86 LDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYS  162 (309)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCccccc
Confidence                              234557889999999999988   999999999999998877776 33321           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-C--ccchhhhcchhhhcCC
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-V--PDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~d~~~~~~~  206 (268)
                                       ..++.++||||+|++++|+++|+.||....... .+....... .  ....+...+.......
T Consensus       163 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07872         163 NEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSNDEFKNY  241 (309)
T ss_pred             cccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcchhhhhhh
Confidence                             235778999999999999999999997543221 111111110 0  0011111000000000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                      .  .+......... .......++.+++..|++.||.+|||+.++++  +++.+
T Consensus       242 ~--~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         242 N--FPKYKPQPLIN-HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             h--cCccCCCchhh-hccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhc
Confidence            0  00000000000 00123445778999999999999999999985  44443

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.91  E-value=1.2e-24  Score=184.65  Aligned_cols=152  Identities=20%  Similarity=0.315  Sum_probs=112.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            3456789999999999999988899999994321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.          
T Consensus        81 ~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~  157 (324)
T cd05589          81 MEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR  157 (324)
T ss_pred             EcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc
Confidence                                345678899999999999988   999999999999998887776 4442          


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++|+||||+++||+++|+.||.......  .......... ..              
T Consensus       158 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~--~~~~i~~~~~-~~--------------  220 (324)
T cd05589         158 TSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEE--VFDSIVNDEV-RY--------------  220 (324)
T ss_pred             ccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC-CC--------------
Confidence                             1345778999999999999999999997532211  1000000000 00              


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                    +......+..++..||+.||++||++
T Consensus       221 --------------p~~~~~~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         221 --------------PRFLSREAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             --------------CCCCCHHHHHHHHHHhhcCHhHcCCC
Confidence                          00224457789999999999999954

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.91  E-value=1.2e-24  Score=184.40  Aligned_cols=148  Identities=24%  Similarity=0.336  Sum_probs=110.4

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+..              
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFC  157 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCcccccc
Confidence                           234568889999999999988   999999999999998887777 45431              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++|+||||+++||+++|+.||......  .+......... ..+                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~i~~~~~-~~~------------------  216 (320)
T cd05590         158 GTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILNDEV-VYP------------------  216 (320)
T ss_pred             cCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCCC-CCC------------------
Confidence                         23567899999999999999999999753221  11111110000 000                  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                ......+.+++..|++.||++||++
T Consensus       217 ----------~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         217 ----------TWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             ----------CCCCHHHHHHHHHHcccCHHHCCCC
Confidence                      0123457788999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.91  E-value=1.7e-24  Score=178.65  Aligned_cols=163  Identities=21%  Similarity=0.363  Sum_probs=117.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecC-CCeEEEEeecCc--------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDP-DQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~l~~--------------------------------------------   96 (268)
                      +|+....||+|+||.||+|.... ++..+|+|.+..                                            
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            46677889999999999999976 578888884320                                            


Q ss_pred             --------------------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-e
Q 044875           97 --------------------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-E  142 (268)
Q Consensus        97 --------------------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e  142 (268)
                                                      .....++.+++.++.|||+ .+   ++|+||+|+||+++.+...++ +
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence                                            2346678899999999996 55   999999999999998887776 3


Q ss_pred             ecc--------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          143 YGM--------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       143 ~~~--------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                      |+.                          ...++.++|+||||+++||+++|+.|+......     ............+
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~  232 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-----SLATKIVEAVYEP  232 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-----HHHHHHhhccCCc
Confidence            332                          234678899999999999999999998642111     0000000000000


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      .        ..                ......+.+++.+||+.||++||++.++.+++.
T Consensus       233 ~--------~~----------------~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         233 L--------PE----------------GMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             C--------Cc----------------ccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            0        00                022345788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.91  E-value=1.5e-24  Score=180.22  Aligned_cols=171  Identities=21%  Similarity=0.364  Sum_probs=126.1

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      .++.++..+.+.|.....||.|+||.||+|....+++.+|+|.+..                                  
T Consensus         6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~   85 (282)
T cd06636           6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKK   85 (282)
T ss_pred             hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence            4666777788899999999999999999999988899999992211                                  


Q ss_pred             -----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           97 -----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        97 -----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                                                         .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++
T Consensus        86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l  162 (282)
T cd06636          86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL  162 (282)
T ss_pred             cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence                                               123567789999999999988   999999999999998776666


Q ss_pred             -eecc--------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          142 -EYGM--------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       142 -e~~~--------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                       +|+.                                ...++.++|+||||+++||+++|..|+........ ...... 
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~-  240 (282)
T cd06636         163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPR-  240 (282)
T ss_pred             eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-hhhHhh-
Confidence             3321                                12356689999999999999999999864321111 000000 


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+        +...                   ....+..+.+++..||+.||.+||++.+++.
T Consensus       241 ~~~--------~~~~-------------------~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         241 NPP--------PKLK-------------------SKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CCC--------CCCc-------------------ccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            000        0000                   0133456889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.91  E-value=1.5e-24  Score=179.86  Aligned_cols=158  Identities=24%  Similarity=0.428  Sum_probs=117.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||+|+||.||+|....++..+|+|.++.                                              
T Consensus         6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06642           6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG   85 (277)
T ss_pred             HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence            4445679999999999999987889999994331                                              


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.               
T Consensus        86 ~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06642          86 GGSALDLLKPGPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcchhhhccc
Confidence                           334568899999999999988   999999999999998777665 3321               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++|+||||++++|+++|..|+........  ........        .+.+    .      
T Consensus       163 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~--------~~~~----~------  222 (277)
T cd06642         163 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLIPKNS--------PPTL----E------  222 (277)
T ss_pred             CcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--HhhhhcCC--------CCCC----C------
Confidence                        23456789999999999999999999864322111  00000000        0000    0      


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                ...+..+.+++..||+.+|++||++.++++
T Consensus       223 ----------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         223 ----------GQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             ----------cccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence                      133456788999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.91  E-value=2.7e-24  Score=176.71  Aligned_cols=163  Identities=22%  Similarity=0.414  Sum_probs=120.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++... ++..+++|.+..                                            
T Consensus         6 ~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~   84 (260)
T cd05073           6 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAK   84 (260)
T ss_pred             cceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCC
Confidence            56778899999999999999875 566788883321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.             
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  161 (260)
T cd05073          85 GSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE  161 (260)
T ss_pred             CcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCccccc
Confidence                             234668889999999999988   999999999999998877766 3221             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ...++.++|+||||++++|+++ |..||......  .............            .   
T Consensus       162 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~------------~---  224 (260)
T cd05073         162 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMP------------R---  224 (260)
T ss_pred             CCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhCCCCCC------------C---
Confidence                           1235668999999999999999 89898753211  1111111111000            0   


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                   ....+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus       225 -------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         225 -------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             -------------cccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence                         01234568899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.91  E-value=8.3e-24  Score=190.61  Aligned_cols=112  Identities=24%  Similarity=0.371  Sum_probs=88.2

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCC----CeEEEEeecCcc-------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPD----QTVVSVRDFKPC-------------------------------------   97 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~l~~~-------------------------------------   97 (268)
                      ..++|...+.||+|+||.||+|++..+    +..+|+|.+...                                     
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKEDE  209 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCCc
Confidence            457899999999999999999999877    889999954310                                     


Q ss_pred             ----------------------------------------------chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcc
Q 044875           98 ----------------------------------------------TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI  131 (268)
Q Consensus        98 ----------------------------------------------~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~ni  131 (268)
                                                                    ....++.+++.||.|||+.+   |+||||||+||
T Consensus       210 ~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLKP~NI  286 (566)
T PLN03225        210 YWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVKPQNI  286 (566)
T ss_pred             eEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCCHHHE
Confidence                                                          01247788999999999988   99999999999


Q ss_pred             ccCC-CCceee-eeccCCC--------------------------------------------------cCccccEeech
Q 044875          132 LLDN-DMTTHV-EYGMGNQ--------------------------------------------------FSTNGDVYSYG  159 (268)
Q Consensus       132 ll~~-~~~~~i-e~~~~~~--------------------------------------------------~~~~~Dv~s~G  159 (268)
                      |++. +...++ |||.+..                                                  ++.++||||||
T Consensus       287 Ll~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlG  366 (566)
T PLN03225        287 IFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAG  366 (566)
T ss_pred             EEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHH
Confidence            9986 455665 6665421                                                  22345999999


Q ss_pred             HHHHHHHhCCCCCC
Q 044875          160 KLLLEIFTGKRSTS  173 (268)
Q Consensus       160 ~vl~el~tg~~p~~  173 (268)
                      |++||++++..+.+
T Consensus       367 viL~el~~~~~~~~  380 (566)
T PLN03225        367 LIFLQMAFPNLRSD  380 (566)
T ss_pred             HHHHHHHhCcCCCc
Confidence            99999998765544

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.91  E-value=1.4e-24  Score=177.81  Aligned_cols=160  Identities=16%  Similarity=0.260  Sum_probs=117.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||++....++..+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            35667889999999999999988899999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.           
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  157 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA  157 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeeccccccc
Confidence                               234577899999999999988   999999999999998776665 3321           


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      +..++.++|+||||++++++++|..||.......  ..............              
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~--------------  221 (255)
T cd08219         158 CTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKN--LILKVCQGSYKPLP--------------  221 (255)
T ss_pred             ccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHH--HHHHHhcCCCCCCC--------------
Confidence                            1335678999999999999999999997422110  11111111000000              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                    ......+.+++..||+.||++||++.+++..
T Consensus       222 --------------~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         222 --------------SHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             --------------cccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence                          0223457788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.91  E-value=2.3e-24  Score=183.26  Aligned_cols=105  Identities=26%  Similarity=0.445  Sum_probs=88.6

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            368999999999999988899999993321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ ||+.+              
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCcccccc
Confidence                           234668889999999999988   999999999999998887777 55422              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                   ..++.++|+||||+++||+++|+.||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~  198 (329)
T cd05618         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence                         2356789999999999999999999963

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.91  E-value=2.2e-24  Score=177.59  Aligned_cols=123  Identities=23%  Similarity=0.332  Sum_probs=85.5

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-------eee-eecc------------------------
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-------THV-EYGM------------------------  145 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-------~~i-e~~~------------------------  145 (268)
                      ....++.|++.|++|||+.+   ++||||||+||+++.+..       .++ +++.                        
T Consensus       106 ~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~  182 (262)
T cd05077         106 WKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVED  182 (262)
T ss_pred             HHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcC
Confidence            45679999999999999988   999999999999975542       222 2221                        


Q ss_pred             CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchH
Q 044875          146 GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQ  224 (268)
Q Consensus       146 ~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~  224 (268)
                      ...++.++||||||+++||+++ |..|+.......  ......            ......                  .
T Consensus       183 ~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~------------~~~~~~------------------~  230 (262)
T cd05077         183 SKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYE------------GQCMLV------------------T  230 (262)
T ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHh------------cCccCC------------------C
Confidence            2346778999999999999985 777776421110  000000            000000                  0


Q ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          225 ESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       225 ~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                      .....+..++..||+.||++||++.+|++.+
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            1234578899999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.91  E-value=1.3e-24  Score=181.28  Aligned_cols=164  Identities=27%  Similarity=0.470  Sum_probs=120.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~~--------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....     ++..+|+|.+..                                      
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            4678888999999999999998742     567899994322                                      


Q ss_pred             ----------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCc
Q 044875           97 ----------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSN  130 (268)
Q Consensus        97 ----------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~n  130 (268)
                                                                    .....++.+++.||.|||+.+   ++||||||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n  160 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN  160 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence                                                          012578999999999999988   9999999999


Q ss_pred             cccCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccc
Q 044875          131 ILLDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEG  179 (268)
Q Consensus       131 ill~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~  179 (268)
                      |+++.+...++ +|+..                             ..++.++||||||+++||+++ |..||.......
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~  240 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE  240 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            99988877666 33321                             345678999999999999997 888886432211


Q ss_pred             cchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          180 LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                        ........   ...        . ..                ...+.++.+++.+||+.+|++|||+.|+++.|+
T Consensus       241 --~~~~~~~~---~~~--------~-~~----------------~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         241 --VIYYVRDG---NVL--------S-CP----------------DNCPLELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             --HHHHHhcC---CCC--------C-CC----------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence              11111100   000        0 00                023456889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.91  E-value=1.1e-24  Score=181.68  Aligned_cols=164  Identities=27%  Similarity=0.457  Sum_probs=116.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|.....||+|+||.||++....+++.+|+|.+..                                             
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~   84 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL   84 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence            34455789999999999999988899999993321                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                            .....++.+++.|++|||+. +   ++||||||+||+++.+...++ +|+.+      
T Consensus        85 ~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          85 MDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             ccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence                                  12356788899999999974 6   999999999999998776666 33321      


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                             ..++.++||||||+++||+++|+.||.....    ..+..........     +.+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~-----~~~~  232 (288)
T cd06616         162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVKGDP-----PILS  232 (288)
T ss_pred             CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcCCCC-----CcCC
Confidence                                   1467789999999999999999999874321    1111111000000     0000


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...                ....+..+.+++..||+.||++|||+.+|+.
T Consensus       233 ~~~----------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         233 NSE----------------EREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             CcC----------------CCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            000                0134556889999999999999999999985

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.91  E-value=1.4e-24  Score=183.52  Aligned_cols=152  Identities=28%  Similarity=0.444  Sum_probs=112.5

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            358999999999999988899999993321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.               
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFC  157 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeec
Confidence                           334678899999999999988   999999999999998876666 4432               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++|||||||++||+++|+.||......  .+........+ ..+                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~~~-~~~------------------  216 (316)
T cd05619         158 GTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMDNP-CYP------------------  216 (316)
T ss_pred             CCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCC------------------
Confidence                        234678999999999999999999999753211  11111111000 000                  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH-HHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS-DVV  252 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-~v~  252 (268)
                                .....++.+++..||+.||++||++. ++.
T Consensus       217 ----------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         217 ----------RWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             ----------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence                      01234467888999999999999997 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.91  E-value=2.7e-24  Score=175.54  Aligned_cols=155  Identities=28%  Similarity=0.462  Sum_probs=115.0

Q ss_pred             cccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------------   96 (268)
                      .||+|+||.||+|... ++..+|+|.+..                                                   
T Consensus         2 ~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   80 (250)
T cd05085           2 LLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL   80 (250)
T ss_pred             ccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence            6899999999999976 678899994321                                                   


Q ss_pred             ------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------------
Q 044875           97 ------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------------  145 (268)
Q Consensus        97 ------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------------  145 (268)
                                  .....++.+++.++.|+|+.+   ++|+|++|+||+++.+...++ +|+.                  
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05085          81 SFLRKKKDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIP  157 (250)
T ss_pred             HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCc
Confidence                        344678899999999999988   999999999999998877666 3332                  


Q ss_pred             ----------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          146 ----------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       146 ----------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                ...++.++|+||||+++||+++ |..||......  .............            ..       
T Consensus       158 ~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~-------  216 (250)
T cd05085         158 IKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGYRMS------------CP-------  216 (250)
T ss_pred             ccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCCCCC------------CC-------
Confidence                      1335678999999999999998 99898753221  1111111110000            00       


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                               ...+..+.+++..||+.+|++||++.++.+.|.
T Consensus       217 ---------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         217 ---------QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             ---------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence                     023456889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.91  E-value=2e-24  Score=177.41  Aligned_cols=164  Identities=25%  Similarity=0.425  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|... ++..+|+|.+..                                           
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~   83 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM   83 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence            467888899999999999999986 567899994432                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.           
T Consensus        84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence                               234678889999999999988   999999999999998877766 3332           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                       +..++.++|+||+|++++|+++ |+.||.......  ...........            ..+
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~~~~~~~~~~~------------~~~  226 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE--VLEQVERGYRM------------PRP  226 (261)
T ss_pred             hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC------------CCC
Confidence                             1345778999999999999998 999986432111  11111110000            000


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                      ...+.++.+++.+||+.+|+.||+++++.+.|+.
T Consensus       227 ----------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         227 ----------------PNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             ----------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence                            0224568899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.91  E-value=2.3e-24  Score=180.42  Aligned_cols=131  Identities=24%  Similarity=0.383  Sum_probs=89.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|++|||+.+   ++|+||||+||+++.++..++ +|+.                             ...+
T Consensus       132 ~~i~~~i~~al~~lH~~~---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  208 (295)
T cd05097         132 LYMAVQIASGMKYLASLN---FVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF  208 (295)
T ss_pred             HHHHHHHHHHHHHHHhcC---eeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCc
Confidence            557899999999999988   999999999999998876666 3332                             1335


Q ss_pred             CccccEeechHHHHHHHh--CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT--GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      +.++|+||||++++|+++  +..||....... .+...... .......     ......                ...+
T Consensus       209 ~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~-~~~~~~~-----~~~~~~----------------~~~~  265 (295)
T cd05097         209 TTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ-VIENTGEF-FRNQGRQ-----IYLSQT----------------PLCP  265 (295)
T ss_pred             CchhhHHHHHHHHHHHHHcCCCCCCcccChHH-HHHHHHHh-hhhcccc-----ccCCCC----------------CCCC
Confidence            778999999999999998  556665422111 01000000 0000000     000000                0224


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ..+.+++.+||+.||++|||+.+|++.|+
T Consensus       266 ~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         266 SPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            56899999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.91  E-value=2.4e-24  Score=187.33  Aligned_cols=128  Identities=27%  Similarity=0.442  Sum_probs=93.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      ..++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.                             +..+
T Consensus       240 ~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  316 (400)
T cd05105         240 LSFTYQVARGMEFLASKN---CVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLY  316 (400)
T ss_pred             HHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCC
Confidence            347789999999999988   999999999999998877666 3332                             2345


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..|+........ +...........                            .+...+.
T Consensus       317 ~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~~~~~~~~~~~----------------------------~~~~~~~  367 (400)
T cd05105         317 TTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FYNKIKSGYRMA----------------------------KPDHATQ  367 (400)
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HHHHHhcCCCCC----------------------------CCccCCH
Confidence            778999999999999997 8899875322111 111111110000                            0013456


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .+.+++..||+.||++||++.+|.++|+.+.
T Consensus       368 ~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         368 EVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            6889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.91  E-value=2.2e-24  Score=180.66  Aligned_cols=132  Identities=23%  Similarity=0.347  Sum_probs=90.1

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      ...++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.+                             +.
T Consensus       132 ~~~~~~~i~~al~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~  208 (296)
T cd05095         132 LIFMATQIASGMKYLSSLN---FVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK  208 (296)
T ss_pred             HHHHHHHHHHHHHHHHHCC---eecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC
Confidence            5678899999999999988   999999999999987776665 33321                             23


Q ss_pred             cCccccEeechHHHHHHHh--CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT--GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQES  226 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (268)
                      ++.++|+||||+++||+++  |..|+........ .....         +.+.........             ..+..+
T Consensus       209 ~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~-~~~~~---------~~~~~~~~~~~~-------------~~~~~~  265 (296)
T cd05095         209 FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV-IENTG---------EFFRDQGRQVYL-------------PKPALC  265 (296)
T ss_pred             ccchhhhhHHHHHHHHHHHhCCCCCccccChHHH-HHHHH---------HHHhhccccccC-------------CCCCCC
Confidence            5678999999999999998  6677754221110 00000         000000000000             000133


Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          227 LITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       227 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      +..+.+++.+||+.||.+||++.+|.+.|+
T Consensus       266 ~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         266 PDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            456889999999999999999999999886

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.91  E-value=3.3e-24  Score=185.85  Aligned_cols=111  Identities=23%  Similarity=0.440  Sum_probs=92.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|...+.||+|+||+||+|....+++.+|+|.+..                                             
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E   81 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD   81 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence            56777899999999999999988999999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||..+   ++||||||+||+++.+...++ |||..          
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~  158 (381)
T cd05626          82 YIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSK  158 (381)
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccc
Confidence                               234567789999999999988   999999999999998777666 55531          


Q ss_pred             ----------------------------------------------------------------CCcCccccEeechHHH
Q 044875          147 ----------------------------------------------------------------NQFSTNGDVYSYGKLL  162 (268)
Q Consensus       147 ----------------------------------------------------------------~~~~~~~Dv~s~G~vl  162 (268)
                                                                                      ..++.++|||||||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il  238 (381)
T cd05626         159 YYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL  238 (381)
T ss_pred             cccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence                                                                            2357789999999999


Q ss_pred             HHHHhCCCCCCcc
Q 044875          163 LEIFTGKRSTSDM  175 (268)
Q Consensus       163 ~el~tg~~p~~~~  175 (268)
                      ||+++|+.||...
T Consensus       239 ~elltG~~Pf~~~  251 (381)
T cd05626         239 FEMLVGQPPFLAP  251 (381)
T ss_pred             HHHHhCCCCCcCC
Confidence            9999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.91  E-value=2.4e-24  Score=178.79  Aligned_cols=155  Identities=19%  Similarity=0.324  Sum_probs=111.7

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|+||.||++....+++.+|+|.+..                                                    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            6999999999999988899999994421                                                    


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------------  145 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------------  145 (268)
                                    .....++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+.                
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGT  157 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCC
Confidence                          223567889999999999988   999999999999998877766 3332                


Q ss_pred             ----------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhH
Q 044875          146 ----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAE  215 (268)
Q Consensus       146 ----------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  215 (268)
                                +..++.++||||+|+++||+++|+.||........ ...............        .          
T Consensus       158 ~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~--------~----------  218 (277)
T cd05607         158 NGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA-KEELKRRTLEDEVKF--------E----------  218 (277)
T ss_pred             CCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh-HHHHHHHhhcccccc--------c----------
Confidence                      23467889999999999999999999874322111 011111100000000        0          


Q ss_pred             HhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          216 ENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                             ......++.+++..||+.||++||++++++
T Consensus       219 -------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         219 -------HQNFTEESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             -------cccCCHHHHHHHHHHhccCHhhCCCCccch
Confidence                   002344578899999999999999997765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.91  E-value=1.7e-24  Score=183.87  Aligned_cols=190  Identities=22%  Similarity=0.265  Sum_probs=119.1

Q ss_pred             CCcccCC--CcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           66 ANIIGAG--SFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G--~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ..+||+|  +||+||++....+++.||+|.+..                                               
T Consensus         3 ~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~   82 (327)
T cd08227           3 LTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA   82 (327)
T ss_pred             hhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccC
Confidence            4679999  788999999998999999994431                                               


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-----------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-----------------  141 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-----------------  141 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.+...++                 
T Consensus        83 ~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~  159 (327)
T cd08227          83 YGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLR  159 (327)
T ss_pred             CCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccccc
Confidence                              234678899999999999988   999999999999987654433                 


Q ss_pred             ------------------eeccC--CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch------h
Q 044875          142 ------------------EYGMG--NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI------S  195 (268)
Q Consensus       142 ------------------e~~~~--~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~------~  195 (268)
                                        |....  ..++.++|||||||+++|+++|+.||........ .........+...      .
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  238 (327)
T cd08227         160 VVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLDTTTIPA  238 (327)
T ss_pred             ccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHhcCCccccccccchhh
Confidence                              11111  2467899999999999999999999975332211 1111110000000      0


Q ss_pred             hh---------cchhhhcCCCc-cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          196 EV---------LDPLFVAGGEE-EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       196 ~~---------~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                      +.         .+......... .....................+.+++..||+.||++|||++++++  .++.+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         239 EELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             hhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence            00         00000000000 000000000001111234556889999999999999999999985  555544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.9e-24  Score=177.88  Aligned_cols=161  Identities=25%  Similarity=0.396  Sum_probs=118.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||.|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            356677889999999999999988899999994321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------  144 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------  144 (268)
                                       .....++.+++.++.|||+.+   ++|+||+|+||+++.+...++ +|+              
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (274)
T cd06609          81 CGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNT  157 (274)
T ss_pred             eCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeeccccccccc
Confidence                             345778899999999999988   999999999999998776665 222              


Q ss_pred             -------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          145 -------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       145 -------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                   .+..++.++||||||+++||+++|..||......  ..........+..+.+        .      
T Consensus       158 ~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~--------~------  221 (274)
T cd06609         158 FVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM--RVLFLIPKNNPPSLEG--------N------  221 (274)
T ss_pred             ccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH--HHHHHhhhcCCCCCcc--------c------
Confidence                         2234678899999999999999999998643211  1111111111110000        0      


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ..+..+.+++..||+.||++||++++++.
T Consensus       222 -------------~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         222 -------------KFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             -------------ccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence                         12345788899999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.91  E-value=4.7e-24  Score=175.91  Aligned_cols=111  Identities=23%  Similarity=0.390  Sum_probs=92.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|....++..+++|.+..                                            
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            478888999999999999999987889999994321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.|+.|||+.+   ++|+|++|+||+++.++..++ +|+..     
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~  158 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQT  158 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence                                    234568899999999999988   999999999999998877666 44321     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                               ..++.++|+||||+++||+++|+.||..
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~  211 (266)
T cd06651         159 ICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAE  211 (266)
T ss_pred             ccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence                                     2246789999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=1.9e-24  Score=179.15  Aligned_cols=124  Identities=27%  Similarity=0.408  Sum_probs=86.0

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-------eee-eecc-----------------------
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-------THV-EYGM-----------------------  145 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-------~~i-e~~~-----------------------  145 (268)
                      ..+..++.+++.||+|||+.+   ++||||||+||+++....       .++ +++.                       
T Consensus       117 ~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~  193 (274)
T cd05076         117 AWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVP  193 (274)
T ss_pred             HHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhc
Confidence            345778999999999999987   999999999999975321       122 2221                       


Q ss_pred             -CCCcCccccEeechHHHHHHH-hCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhch
Q 044875          146 -GNQFSTNGDVYSYGKLLLEIF-TGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQI  223 (268)
Q Consensus       146 -~~~~~~~~Dv~s~G~vl~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  223 (268)
                       ...++.++||||||+++||++ +|..|+.......  .........  ..            ..               
T Consensus       194 ~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~~~--~~------------~~---------------  242 (274)
T cd05076         194 GGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--KERFYEKKH--RL------------PE---------------  242 (274)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--HHHHHHhcc--CC------------CC---------------
Confidence             134678899999999999995 5888886532211  011100000  00            00               


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          224 QESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       224 ~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                       .....+.+++..||+.+|++|||+.+|++.|
T Consensus       243 -~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         243 -PSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             -CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence             1123478899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.91  E-value=1.5e-24  Score=180.49  Aligned_cols=186  Identities=19%  Similarity=0.353  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            356777899999999999999987899999994321                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.+++|||+.+   ++|+|++|+||+++.+...++ +|+..          
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence                               345678889999999999988   999999999999998877766 33311          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh--hCccchhhhcchh--hhc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM--AVPDQISEVLDPL--FVA  204 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~--~~~  204 (268)
                                        ..++.++||||||++++|+++|++|+....... ........  ..........+..  ...
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07846         158 TDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAG  236 (286)
T ss_pred             CcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhc
Confidence                              224678999999999999999998886422110 00000000  0000011111100  000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...   +...+..............+.+++..||+.+|++||++.++++
T Consensus       237 ~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         237 MRL---PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             ccc---ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            000   0000000000011134567899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.91  E-value=1.5e-24  Score=183.92  Aligned_cols=154  Identities=21%  Similarity=0.320  Sum_probs=114.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecC----------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK----------------------------------------------   95 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~----------------------------------------------   95 (268)
                      +|+..+.||+|+||.||++....++..||+|.+.                                              
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            3666788999999999999998889999999332                                              


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                         +.....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.          
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~  157 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT  157 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCCCcc
Confidence                               1345678899999999999988   999999999999998887776 4442          


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++|+||+|+++||+++|+.||.......  .......... ..              
T Consensus       158 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~--~~~~i~~~~~-~~--------------  220 (323)
T cd05615         158 TRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE--LFQSIMEHNV-SY--------------  220 (323)
T ss_pred             ccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH--HHHHHHhCCC-CC--------------
Confidence                             1346778999999999999999999997532211  1111000000 00              


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS  249 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~  249 (268)
                                    +.....++.+++..|++.+|.+|++..
T Consensus       221 --------------p~~~~~~~~~li~~~l~~~p~~R~~~~  247 (323)
T cd05615         221 --------------PKSLSKEAVSICKGLMTKHPSKRLGCG  247 (323)
T ss_pred             --------------CccCCHHHHHHHHHHcccCHhhCCCCC
Confidence                          002234577889999999999999853

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=2.7e-24  Score=178.91  Aligned_cols=184  Identities=21%  Similarity=0.330  Sum_probs=121.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+....||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            356777889999999999999988899999994321                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.+|.|||+.+   ++|+||||+||+++.+...++ +|+.           
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence                               346788999999999999988   999999999999998876666 2221           


Q ss_pred             ----------------C-CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh--hCccchhhhcchhhh--c
Q 044875          146 ----------------G-NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM--AVPDQISEVLDPLFV--A  204 (268)
Q Consensus       146 ----------------~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~--~  204 (268)
                                      + ..++.++|+||||++++|+++|+.||.+...... .......  .........++....  .
T Consensus       158 ~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T cd07847         158 TDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQFFKG  236 (286)
T ss_pred             cCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhccccccccc
Confidence                            1 2356789999999999999999999975332111 1111100  000000011100000  0


Q ss_pred             --CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 --GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ..........+.     ........+.+++..||+.+|++||++.+++.
T Consensus       237 ~~~~~~~~~~~~~~-----~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         237 LSIPEPETREPLES-----KFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             ccCCCcccccCHHH-----HhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence              000000000000     00123466889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=1.6e-24  Score=180.36  Aligned_cols=173  Identities=21%  Similarity=0.327  Sum_probs=126.1

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      +.++.+..++++|.....||+|+||.||++....+++.+|+|.+..                                  
T Consensus         8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~   87 (286)
T cd06638           8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKK   87 (286)
T ss_pred             EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeec
Confidence            4556777888999999999999999999999988899999993321                                  


Q ss_pred             ------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCcee
Q 044875           97 ------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH  140 (268)
Q Consensus        97 ------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~  140 (268)
                                                          .....++.+++.|+.|||+.+   ++||||||+||+++.+...+
T Consensus        88 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~k  164 (286)
T cd06638          88 DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVK  164 (286)
T ss_pred             ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEE
Confidence                                                112347789999999999988   99999999999999877666


Q ss_pred             e-eeccC--------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh
Q 044875          141 V-EYGMG--------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK  187 (268)
Q Consensus       141 i-e~~~~--------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~  187 (268)
                      + +|+..                                ..++.++||||+|+++||+++|+.|+........ +.....
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~-~~~~~~  243 (286)
T cd06638         165 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRA-LFKIPR  243 (286)
T ss_pred             EccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHH-Hhhccc
Confidence            6 33321                                2256789999999999999999999875322110 000000


Q ss_pred             hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          188 MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       188 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                      .    ......++                       ......+..++..||+.||++|||+.++++.
T Consensus       244 ~----~~~~~~~~-----------------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         244 N----PPPTLHQP-----------------------ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             c----CCCcccCC-----------------------CCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            0    00000000                       0123457889999999999999999999864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.91  E-value=1.9e-24  Score=179.79  Aligned_cols=181  Identities=17%  Similarity=0.259  Sum_probs=118.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....+|..+|+|.+..                                              
T Consensus         2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   81 (284)
T cd07839           2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYC   81 (284)
T ss_pred             ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecC
Confidence            5566789999999999999988899999994421                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.++++||.|||+.+   ++|+||||+||+++.+...++ +|+..            
T Consensus        82 ~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (284)
T cd07839          82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSA  158 (284)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCC
Confidence                             234678899999999999988   999999999999998877766 33211            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc------hhhhcchhhhc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ------ISEVLDPLFVA  204 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~d~~~~~  204 (268)
                                      ..++.++|+||||++++|+++|..|+.........+...........      .....+.....
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence                            22577899999999999999998886532221111111111100000      00000000000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....       .............++.+++..||+.||++|||+++++.
T Consensus       239 ~~~~-------~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         239 MYPA-------TTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CCCC-------cchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            0000       00000011123456788999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=2.8e-24  Score=179.04  Aligned_cols=187  Identities=21%  Similarity=0.391  Sum_probs=123.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            357778899999999999999988899999994321                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|+.|||+.+   ++|+|++|+||+++.++..++ +++.           
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence                               345678889999999999988   999999999999998877776 2221           


Q ss_pred             -----------------CC-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh--hCccchhhhc--chhhh
Q 044875          146 -----------------GN-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM--AVPDQISEVL--DPLFV  203 (268)
Q Consensus       146 -----------------~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~--d~~~~  203 (268)
                                       +. .++.++|+||||+++||+++|..|+....... .+......  ..+......+  ++...
T Consensus       158 ~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07833         158 LTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNPRFA  236 (288)
T ss_pred             ccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCcccc
Confidence                             12 56788999999999999999999987432211 11111100  0000000000  00000


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..... . ...........+...+.++.+++..||+.+|++||++++++.
T Consensus       237 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         237 GVAFP-E-PSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             ccccC-C-CCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            00000 0 000000111112234677899999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.91  E-value=4e-24  Score=176.57  Aligned_cols=128  Identities=23%  Similarity=0.388  Sum_probs=88.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------------------------
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------------------------  146 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------------------------  146 (268)
                      ..++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+.+                                
T Consensus       103 ~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (269)
T cd05042         103 QRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQ  179 (269)
T ss_pred             HHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccc
Confidence            568889999999999988   999999999999998887766 33321                                


Q ss_pred             ----CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhh
Q 044875          147 ----NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG  221 (268)
Q Consensus       147 ----~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  221 (268)
                          ..++.++||||||+++||+++ |..||....... .+.........    ...++.+.                  
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~----~~~~~~~~------------------  236 (269)
T cd05042         180 DLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQDI----KLPKPQLD------------------  236 (269)
T ss_pred             cccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccCc----cCCCCccc------------------
Confidence                124568999999999999999 778886532211 11111111110    11111110                  


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          222 QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       222 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                        ......+.+++..||. ||++|||+++|++.|.
T Consensus       237 --~~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         237 --LKYSDRWYEVMQFCWL-DPETRPTAEEVHELLT  268 (269)
T ss_pred             --ccCCHHHHHHHHHHhc-CcccccCHHHHHHHhc
Confidence              0233456677888995 9999999999998873

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.91  E-value=2.9e-24  Score=178.60  Aligned_cols=155  Identities=19%  Similarity=0.294  Sum_probs=111.4

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|+||+||++....+++.+|+|.+..                                                    
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            6999999999999988899999993321                                                    


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                      .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+             
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY  157 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence                            233568889999999999988   999999999999998777666 44322             


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                    ..++.++|+||||+++||+++|+.||........ .............          .       
T Consensus       158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~----------~-------  219 (280)
T cd05608         158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRILNDSV----------T-------  219 (280)
T ss_pred             CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh-HHHHHHhhcccCC----------C-------
Confidence                          3456789999999999999999999974321110 0000000000000          0       


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                               .+...+..+.+++..||+.||++||     +++++++
T Consensus       220 ---------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         220 ---------YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             ---------CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence                     0012345678899999999999999     5666764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.91  E-value=4.2e-24  Score=180.46  Aligned_cols=130  Identities=24%  Similarity=0.418  Sum_probs=95.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      .+++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+..                             ..+
T Consensus       137 ~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (314)
T cd05099         137 VSCAYQVARGMEYLESRR---CIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY  213 (314)
T ss_pred             HHHHHHHHHHHHHHHHCC---eeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCc
Confidence            456789999999999988   999999999999998877666 33322                             335


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++|+||||+++||+++ |..||......  .+...........            .                +..++.
T Consensus       214 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~----------------~~~~~~  263 (314)
T cd05099         214 THQSDVWSFGILMWEIFTLGGSPYPGIPVE--ELFKLLREGHRMD------------K----------------PSNCTH  263 (314)
T ss_pred             CccchhhHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC------------C----------------CCCCCH
Confidence            678999999999999999 88888643211  1111111110000            0                013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ++.+++.+||+.||++|||+.++++.|+++....
T Consensus       264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence            6788999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.91  E-value=2.1e-24  Score=183.06  Aligned_cols=149  Identities=24%  Similarity=0.337  Sum_probs=111.1

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||+||+|....+++.+|+|.+..                                                  
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            358999999999999988999999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.               
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFC  157 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCcccccc
Confidence                           234568899999999999988   999999999999998877776 4442               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++||||||+++||+++|+.||......     +..........  .+.              
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-----~~~~~i~~~~~--~~~--------------  216 (323)
T cd05575         158 GTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-----EMYDNILNKPL--RLK--------------  216 (323)
T ss_pred             CChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-----HHHHHHHcCCC--CCC--------------
Confidence                        234678899999999999999999999753211     11111000000  000              


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS  249 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~  249 (268)
                                ......+.+++..|++.||.+||++.
T Consensus       217 ----------~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         217 ----------PNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             ----------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence                      02234578899999999999999985

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=2e-24  Score=181.10  Aligned_cols=162  Identities=18%  Similarity=0.298  Sum_probs=119.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~   98 (297)
T cd06656          19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   98 (297)
T ss_pred             hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence            567778899999999999999887899999994321                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.++.|||+.+   ++|+||||+||+++.+...++ +|+.              
T Consensus        99 ~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~  175 (297)
T cd06656          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (297)
T ss_pred             CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcc
Confidence                            345678889999999999988   999999999999998776666 4432              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ...++.++|+||||++++++++|+.||.......... .......+    ....             
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~~~~~~~~----~~~~-------------  237 (297)
T cd06656         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTP----ELQN-------------  237 (297)
T ss_pred             cCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-eeccCCCC----CCCC-------------
Confidence                         1235678999999999999999999996432211100 00000000    0000             


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                +......+.+++..||+.+|++||+++++++
T Consensus       238 ----------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         238 ----------PERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             ----------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                      0123345678889999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=3.2e-24  Score=178.79  Aligned_cols=161  Identities=22%  Similarity=0.330  Sum_probs=116.6

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||+||++....++..+|+|.+..                                              
T Consensus         2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (285)
T cd05605           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEec
Confidence            5666889999999999999987899999994321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.          
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05605          82 MNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI  158 (285)
T ss_pred             cCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc
Confidence                                234668899999999999988   999999999999998776665 4432          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ...++.++|+||+|+++||+++|+.||....... ........ .....         ..    
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~~---------~~----  223 (285)
T cd05605         159 RGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKV-KREEVERR-VKEDQ---------EE----  223 (285)
T ss_pred             ccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhh-HHHHHHHH-hhhcc---------cc----
Confidence                            2345678999999999999999999997532211 00000000 00000         00    


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                  .+...+..+.+++..||+.||++||     +++++.+
T Consensus       224 ------------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         224 ------------YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             ------------cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence                        0013345678899999999999999     7778764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.91  E-value=9.2e-25  Score=179.11  Aligned_cols=162  Identities=26%  Similarity=0.449  Sum_probs=118.2

Q ss_pred             cCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------------   96 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------------   96 (268)
                      ..+.||+|+||+||++....+++.+|+|.+..                                                
T Consensus         3 ~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~   82 (260)
T PF00069_consen    3 LVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPG   82 (260)
T ss_dssp             EEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETT
T ss_pred             EeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccccc
Confidence            34679999999999999999999999993322                                                


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.++++||.|||+.+   ++|+||||+||+++.+...++ +|+.               
T Consensus        83 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  159 (260)
T PF00069_consen   83 GSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFV  159 (260)
T ss_dssp             EBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccc
Confidence                           456889999999999999988   999999999999998776666 3332               


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ....+.++|+||+|++++++++|..|+......  .................        ..     
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~--------~~-----  224 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKRPLPSS--------SQ-----  224 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHTHHHHH--------TT-----
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhccccccccc--------cc-----
Confidence                         235678999999999999999999999864110  00001100000000000        00     


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                               ........+.+++..||+.||++||++.++++
T Consensus       225 ---------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  225 ---------QSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             ---------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ---------ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                     00011267899999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.91  E-value=4.3e-24  Score=178.50  Aligned_cols=162  Identities=19%  Similarity=0.287  Sum_probs=117.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||.||+|....++..+++|.+..                                            
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   91 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC   91 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence            456677889999999999999988899999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.++.|||+.+   ++|+|++|+||+++.+...++ +|+.            
T Consensus        92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~  168 (292)
T cd06644          92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRD  168 (292)
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccccccc
Confidence                              344678899999999999988   999999999999987776666 3332            


Q ss_pred             --------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          146 --------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       146 --------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ...++.++|+||||+++||+++|..|+....... ..........    .....      
T Consensus       169 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~----~~~~~------  237 (292)
T cd06644         169 SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEP----PTLSQ------  237 (292)
T ss_pred             eecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHHhcCCC----ccCCC------
Confidence                                1224567999999999999999999986432111 0111100000    00000      


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       +.....++.+++..||+.||++||+++++++
T Consensus       238 -----------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         238 -----------------PSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             -----------------CcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                             0123345788999999999999999999974

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=1e-23  Score=177.54  Aligned_cols=161  Identities=24%  Similarity=0.315  Sum_probs=119.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ..|+..+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~   94 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM   94 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence            457777899999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.          
T Consensus        95 e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~  171 (307)
T cd06607          95 EYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSF  171 (307)
T ss_pred             HhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCCCCCc
Confidence                                234568889999999999988   999999999999998877766 2221          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ...++.++||||||+++||+++|..|+........ .... ....+..        .   .   
T Consensus       172 ~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~~~-~~~~~~~--------~---~---  235 (307)
T cd06607         172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHI-AQNDSPT--------L---S---  235 (307)
T ss_pred             cCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HHHH-hcCCCCC--------C---C---
Confidence                            23467789999999999999999999875321110 0000 0000000        0   0   


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   .......+..++..||+.+|++||++.+++.
T Consensus       236 -------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         236 -------------SNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             -------------chhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                         0134456889999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-24  Score=184.64  Aligned_cols=162  Identities=19%  Similarity=0.309  Sum_probs=118.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            467778899999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.          
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  157 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR  157 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence                                344668899999999999988   999999999999998877766 3332          


Q ss_pred             ----------------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccc
Q 044875          146 ----------------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG  179 (268)
Q Consensus       146 ----------------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~  179 (268)
                                                                    +..++.++|||||||++||+++|+.||.......
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~  237 (350)
T cd05573         158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQE  237 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHH
Confidence                                                          1235778999999999999999999997532111


Q ss_pred             cchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-hHHHHH
Q 044875          180 LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-TSDVVN  253 (268)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~~v~~  253 (268)
                       ..............+..                          ......+.+++..|++ ||.+||+ ++++++
T Consensus       238 -~~~~i~~~~~~~~~p~~--------------------------~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         238 -TYNKIINWKESLRFPPD--------------------------PPVSPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             -HHHHHhccCCcccCCCC--------------------------CCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence             00000000000000000                          0124457788888997 9999999 999885

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=9.5e-25  Score=179.30  Aligned_cols=125  Identities=22%  Similarity=0.358  Sum_probs=86.1

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce--------ee-eecc----------------------
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT--------HV-EYGM----------------------  145 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~--------~i-e~~~----------------------  145 (268)
                      .....++.+++.|++|||+.+   ++||||||+||+++.+...        ++ +++.                      
T Consensus       100 ~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~  176 (258)
T cd05078         100 SWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECI  176 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhc
Confidence            345678899999999999988   9999999999999876543        22 2221                      


Q ss_pred             -C-CCcCccccEeechHHHHHHHhCC-CCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhc
Q 044875          146 -G-NQFSTNGDVYSYGKLLLEIFTGK-RSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQ  222 (268)
Q Consensus       146 -~-~~~~~~~Dv~s~G~vl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  222 (268)
                       . ..++.++|+||||+++||+++|. .|+.......  .......  ...+            +               
T Consensus       177 ~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~~~~--~~~~------------~---------------  225 (258)
T cd05078         177 ENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQFYED--RHQL------------P---------------  225 (258)
T ss_pred             cCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHHHHc--cccC------------C---------------
Confidence             1 23577899999999999999985 4544321110  0000000  0000            0               


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          223 IQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       223 ~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                       .....++.+++..||+.||++|||++++++.|+
T Consensus       226 -~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         226 -APKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             -CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             012245789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.91  E-value=4.2e-24  Score=177.68  Aligned_cols=159  Identities=21%  Similarity=0.326  Sum_probs=115.3

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      .....||+|+||.||+|....++..+++|.+..                                               
T Consensus         8 ~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~   87 (282)
T cd06643           8 EIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG   87 (282)
T ss_pred             HHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCC
Confidence            445779999999999999988889999984321                                               


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..              
T Consensus        88 ~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  164 (282)
T cd06643          88 AVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI  164 (282)
T ss_pred             cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEcccccccccccccccccccc
Confidence                           345678899999999999988   999999999999988776666 33321              


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++|+||||+++||+++|..|+....... ..........+    ....+        
T Consensus       165 ~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~----~~~~~--------  231 (282)
T cd06643         165 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPP----TLAQP--------  231 (282)
T ss_pred             ccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCC----CCCCc--------
Confidence                              224568999999999999999999987532211 11111110000    00000        


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     .....++.+++..||+.||++||++.++++
T Consensus       232 ---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         232 ---------------SRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             ---------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                           023345788999999999999999999874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.91  E-value=1.3e-24  Score=184.38  Aligned_cols=153  Identities=21%  Similarity=0.356  Sum_probs=113.3

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....++..+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            358999999999999988899999993321                                                  


Q ss_pred             --------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                    .....++.+++.||.|||+ .+   ++||||||+||+++.++..++ ||+.               
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC  157 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccccc
Confidence                          3456788999999999997 56   999999999999998887776 4442               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++||||||+++||+++|+.||......  ........... .++                  
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~--~~~~~i~~~~~-~~p------------------  216 (325)
T cd05594         158 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-RFP------------------  216 (325)
T ss_pred             CCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHH--HHHHHHhcCCC-CCC------------------
Confidence                        234678899999999999999999999753221  11111100000 000                  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                .....++.+++..||+.||++||     ++.++++
T Consensus       217 ----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         217 ----------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             ----------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence                      02234577889999999999996     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.91  E-value=3.9e-24  Score=180.10  Aligned_cols=130  Identities=25%  Similarity=0.402  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~  149 (268)
                      +.++.+++.|++|||+.+   ++|+||||+||+++.+...++ +|+.                             +..+
T Consensus       143 ~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         143 VSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             HHHHHHHHHHHHHHHHCC---cccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCC
Confidence            467889999999999988   999999999999998776665 3321                             1335


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++|+||||+++||+++ |..|+.....+  .+..........            ..                +.....
T Consensus       220 ~~~~DvwslG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~------------~~----------------~~~~~~  269 (307)
T cd05098         220 THQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRM------------DK----------------PSNCTN  269 (307)
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHcCCCC------------CC----------------CCcCCH
Confidence            678999999999999998 88888642211  111111110000            00                013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      .+.+++..||+.+|++|||+.+|++.|+++....
T Consensus       270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~  303 (307)
T cd05098         270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT  303 (307)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence            6788999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=5.3e-24  Score=175.24  Aligned_cols=165  Identities=27%  Similarity=0.445  Sum_probs=119.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||++....+++.+++|.+..                                             
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM   81 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence            56667889999999999999988899999994322                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eec------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------  144 (268)
                                        .....++.+++.+++|||+ .+   ++|+||+|+||+++.+...++ +++            
T Consensus        82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  158 (265)
T cd06605          82 DGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT  158 (265)
T ss_pred             CCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc
Confidence                              2235688899999999999 77   999999999999998876666 332            


Q ss_pred             -------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          145 -------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       145 -------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                   .+..++.++|+||||++++++++|..|+...........+............     +   ..    
T Consensus       159 ~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~---~~----  226 (265)
T cd06605         159 FVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPR-----L---PS----  226 (265)
T ss_pred             ccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCC-----C---Ch----
Confidence                         2245678899999999999999999999754221111111111110000000     0   00    


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ......+.+++..||..||++|||+.+++.
T Consensus       227 ------------~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         227 ------------GKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             ------------hhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence                        013455788999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=3.1e-24  Score=178.87  Aligned_cols=161  Identities=22%  Similarity=0.352  Sum_probs=115.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||+||+|....+++.+|+|.+..                                              
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI   81 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence            4455789999999999999988899999994321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.|++.|+.|||+.+   ++||||||+||+++.+...++ +|+.+         
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05632          82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI  158 (285)
T ss_pred             ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc
Confidence                                245678899999999999988   999999999999998776666 44422         


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++|+||||++++|+++|..||........ ...........  ....           
T Consensus       159 ~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~~~~~~~~--~~~~-----------  224 (285)
T cd05632         159 RGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEVDRRVLET--EEVY-----------  224 (285)
T ss_pred             cCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhhcc--cccc-----------
Confidence                             3457789999999999999999999975322110 01110000000  0000           


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                                   .......+.+++..||+.||++||+     +.+++.
T Consensus       225 -------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         225 -------------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             -------------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence                         0022345778899999999999999     556664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.90  E-value=3.1e-24  Score=175.84  Aligned_cols=162  Identities=22%  Similarity=0.444  Sum_probs=116.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|... ++..+|+|.+..                                            
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   82 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME   82 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence            35666788999999999999886 466789983321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------  144 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------  144 (268)
                                       .....++.+++.+++|||+.+   ++|+|++|+||+++.+...++ +|+              
T Consensus        83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (256)
T cd05112          83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST  159 (256)
T ss_pred             CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcccccC
Confidence                             234668889999999999988   999999999999987766655 222              


Q ss_pred             --------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          145 --------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       145 --------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                    .+..++.++|+||||+++||+++ |..|+......  ...+.......     ...+         
T Consensus       160 ~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~-----~~~~---------  223 (256)
T cd05112         160 GTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS--EVVETINAGFR-----LYKP---------  223 (256)
T ss_pred             CCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHhCCCC-----CCCC---------
Confidence                          12345678999999999999998 88888642211  11111110000     0000         


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                    ......+.+++.+||+.+|++|||+.++++.|+
T Consensus       224 --------------~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         224 --------------RLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             --------------CCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence                          012356889999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=6e-24  Score=174.55  Aligned_cols=164  Identities=20%  Similarity=0.318  Sum_probs=119.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||.|+||.||+|....++..+++|.+..                                            
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~   82 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC   82 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence            567778899999999999999987888999993321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                        .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+             
T Consensus        83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  159 (262)
T cd06613          83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRK  159 (262)
T ss_pred             CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhhhccc
Confidence                              234568899999999999988   999999999999998776666 222             


Q ss_pred             --------------cCC---CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          145 --------------MGN---QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       145 --------------~~~---~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                    ...   .++.++|+||||++++|+++|+.|+........ ...........       +.+.    
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~~~~-------~~~~----  227 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSNFPP-------PKLK----  227 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCCC-------cccc----
Confidence                          112   566789999999999999999999875322111 10000000000       0000    


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    .....+.++.+++.+||+.+|.+|||+++|+.
T Consensus       228 --------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         228 --------------DKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             --------------chhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                          00133456889999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2.4e-24  Score=189.77  Aligned_cols=110  Identities=23%  Similarity=0.345  Sum_probs=91.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      .+|.....||+|+||.||++.....++.||+|..                                              
T Consensus       169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~~~L~~  248 (461)
T PHA03211        169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWYASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYRSDLYT  248 (461)
T ss_pred             CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccCCCHHH
Confidence            3578888999999999999999988999999921                                              


Q ss_pred             ---------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------------
Q 044875           95 ---------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------------  146 (268)
Q Consensus        95 ---------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------------  146 (268)
                               ++.....++.+++.||.|||+.+   ++||||||+|||++.+...++ +|+.+                  
T Consensus       249 ~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT  325 (461)
T PHA03211        249 YLGARLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGT  325 (461)
T ss_pred             HHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCC
Confidence                     11345789999999999999988   999999999999998777766 44422                  


Q ss_pred             -----------CCcCccccEeechHHHHHHHhCCCCCC
Q 044875          147 -----------NQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       147 -----------~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                                 ..++.++|||||||++||+++|..|+.
T Consensus       326 ~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        326 VDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             cCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence                       346778999999999999999877654

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.90  E-value=2.8e-24  Score=180.07  Aligned_cols=162  Identities=17%  Similarity=0.291  Sum_probs=118.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|.....||.|+||.||+|....+++.+++|.+..                                            
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   98 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL   98 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence            357777889999999999999988899999993321                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.+++|||+.+   ++|+||+|+||+++.+...++ +|+.              
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (296)
T cd06655          99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (296)
T ss_pred             CCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCc
Confidence                            445678889999999999988   999999999999998776666 3331              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   +..++.++|+||||+++||+++|+.||........ ..... .......   ..             
T Consensus       176 ~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~~~~-~~~~~~~---~~-------------  237 (296)
T cd06655         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIA-TNGTPEL---QN-------------  237 (296)
T ss_pred             CCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-hcCCccc---CC-------------
Confidence                         13356789999999999999999999975322111 00000 0000000   00             


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                +......+.+++..||+.||++||++.+++.
T Consensus       238 ----------~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         238 ----------PEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             ----------cccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence                      0022345778899999999999999999983

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=4.2e-24  Score=184.07  Aligned_cols=112  Identities=21%  Similarity=0.399  Sum_probs=94.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.||+|.+..                                            
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            467888999999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..         
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  157 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT  157 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence                                345668889999999999988   999999999999998877666 44421         


Q ss_pred             --------------------------------------------------------CCcCccccEeechHHHHHHHhCCC
Q 044875          147 --------------------------------------------------------NQFSTNGDVYSYGKLLLEIFTGKR  170 (268)
Q Consensus       147 --------------------------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~  170 (268)
                                                                              ..++.++|||||||+++|+++|..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~  237 (364)
T cd05599         158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP  237 (364)
T ss_pred             cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence                                                                    235778999999999999999999


Q ss_pred             CCCcc
Q 044875          171 STSDM  175 (268)
Q Consensus       171 p~~~~  175 (268)
                      ||...
T Consensus       238 Pf~~~  242 (364)
T cd05599         238 PFCSD  242 (364)
T ss_pred             CCCCC
Confidence            99753

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.90  E-value=6.9e-24  Score=173.25  Aligned_cols=156  Identities=28%  Similarity=0.476  Sum_probs=114.7

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++.... ++.+|+|.+..                                                  
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            368999999999999975 89999993221                                                  


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------------  144 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------------  144 (268)
                                   .....++.+++.++.|||+.+   ++|||++|+||+++.+...++ +|+                  
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence                         234667889999999999988   999999999999998776665 222                  


Q ss_pred             -----------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          145 -----------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       145 -----------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                 .+..++.++|+||||++++|+++ |..||......  .............            .      
T Consensus       157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~~~~------------~------  216 (251)
T cd05041         157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGYRMP------------A------  216 (251)
T ss_pred             ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCCCCC------------C------
Confidence                       12346678999999999999999 88888653221  1111111100000            0      


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                +...+..+.+++..||+.+|++||++.++++.|+
T Consensus       217 ----------~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         217 ----------PQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             ----------CccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence                      0133456888999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=2.9e-24  Score=183.60  Aligned_cols=194  Identities=18%  Similarity=0.335  Sum_probs=123.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|.....||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   94 (342)
T cd07879          15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQD   94 (342)
T ss_pred             cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCce
Confidence            788888999999999999999987899999994421                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.|++|||+.+   ++||||||+||+++.++..++ +|+..       
T Consensus        95 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~  171 (342)
T cd07879          95 FYLVMPYMQTDLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLARHADAEM  171 (342)
T ss_pred             EEEEecccccCHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCC
Confidence                                  122447789999999999988   999999999999998877766 33311       


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc-cchhhhcchhhhcCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP-DQISEVLDPLFVAGG  206 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~  206 (268)
                                        ..++.++||||||++++|+++|+.||....... .+....... .+ +.+.+..+.......
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (342)
T cd07879         172 TGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQKLEDKAAKSY  250 (342)
T ss_pred             CCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhcccchHHH
Confidence                              235678999999999999999999997532111 111111100 00 011111100000000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                      ....+.......... .......+.+++..||+.||++||++++++.  .++..+
T Consensus       251 ~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         251 IKSLPKYPRKDFSTL-FPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             HhhcCCcccchHHHH-hcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            000000000000000 0012345788999999999999999999983  465554

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.90  E-value=9.1e-24  Score=173.06  Aligned_cols=159  Identities=19%  Similarity=0.303  Sum_probs=116.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||.|+||.||++....+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            35667889999999999999988889999993321                                             


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec----------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG----------  144 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~----------  144 (268)
                                           .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+          
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence                                 234678899999999999988   999999999999987766655 222          


Q ss_pred             -----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          145 -----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       145 -----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                       .+..++.++|+||+|++++|+++|+.||......     .............         . 
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~---------~-  222 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMN-----SLVYRIIEGKLPP---------M-  222 (257)
T ss_pred             ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-----HHHHHHHhcCCCC---------C-
Confidence                             1233567899999999999999999998742211     1110000000000         0 


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     .......+.+++..||+.||++||++.+++.
T Consensus       223 ---------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         223 ---------------PKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             ---------------ccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence                           0133456889999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.90  E-value=5.3e-24  Score=180.88  Aligned_cols=105  Identities=28%  Similarity=0.477  Sum_probs=88.7

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------------   95 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------------   95 (268)
                      +.||+|+||.||++....+++.+|+|.+.                                                   
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            36999999999999998889999999332                                                   


Q ss_pred             --------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           96 --------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        96 --------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                    +.....++.+++.|++|||+.+   ++||||||+||+++.+...++ +|+.               
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFC  157 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceeccc
Confidence                          1345678899999999999988   999999999999998877766 4432               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                  +..++.++||||||+++||+++|+.||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         158 GTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             CCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCc
Confidence                        23467799999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.90  E-value=5.3e-24  Score=181.21  Aligned_cols=162  Identities=21%  Similarity=0.257  Sum_probs=114.1

Q ss_pred             CCCcCCcccCCCcceEEEEEec---CCCeEEEEeecC-------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFK-------------------------------------------   95 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~-------------------------------------------   95 (268)
                      +|...+.||+|+||.||++...   .++..+|+|.+.                                           
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            3666788999999999998763   467899999432                                           


Q ss_pred             -----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           96 -----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        96 -----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                             +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+     
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~  157 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKEFLS  157 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCccccc
Confidence                                   1334567889999999999988   999999999999998887776 44422     


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++||||||+++||+++|..||....... ...........      .++..
T Consensus       158 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~~------~~~~~  230 (332)
T cd05614         158 EEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRRILK------CDPPF  230 (332)
T ss_pred             cCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHHHhc------CCCCC
Confidence                                    124678999999999999999999996422111 11111100000      00000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                      .                    ......+.+++..||+.||++||     +++++++
T Consensus       231 ~--------------------~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         231 P--------------------SFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             C--------------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            0                    02234567889999999999999     5667663

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.90  E-value=3.1e-24  Score=178.53  Aligned_cols=183  Identities=20%  Similarity=0.318  Sum_probs=118.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|+...+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            35667889999999999999988899999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||+|||+.+   ++|+||+|+||+++.++..++ +|+.          
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  157 (285)
T cd07861          81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV  157 (285)
T ss_pred             CCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCccc
Confidence                                233568899999999999988   999999999999998877766 3331          


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc--cchhhhcc-hhhh
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP--DQISEVLD-PLFV  203 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~d-~~~~  203 (268)
                                        ...++.++||||||++++|+++|+.||........ ........ .+  .......+ +...
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (285)
T cd07861         158 YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGVTSLPDYK  236 (285)
T ss_pred             ccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcchhhHHHH
Confidence                              12356789999999999999999999874322111 11110000 00  00000000 0000


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .........     ...........++.+++..||+.||++|||+.+|+.
T Consensus       237 ~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         237 NTFPKWKKG-----SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             hhccccCcc-----hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            000000000     000001123456788999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=3e-24  Score=187.38  Aligned_cols=155  Identities=23%  Similarity=0.338  Sum_probs=125.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      -++|....+||+|+||+|+.+....+++.+|||.++.                                           
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f  446 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF  446 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence            3678888999999999999999999999999994432                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++..|+.||.|||+++   |++||||-.|||+|.++..|+ |||+         
T Consensus       447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~  523 (694)
T KOG0694|consen  447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD  523 (694)
T ss_pred             EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccccCCCCC
Confidence                                 445678889999999999999   999999999999999999999 4543         


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        ...|+.++|-|||||++|||+.|..||.+...+                 +++|.-+.... 
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~FdsI~~d~~-  585 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDSIVNDEV-  585 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHHHhcCCC-
Confidence                              356899999999999999999999999864333                 22222221111 


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                   .++...+.+...|+...+..+|++|..+
T Consensus       586 -------------~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  586 -------------RYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             -------------CCCCcccHHHHHHHHHHhccCcccccCC
Confidence                         0123556778999999999999999887

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.90  E-value=2.9e-24  Score=177.11  Aligned_cols=164  Identities=18%  Similarity=0.279  Sum_probs=116.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC   88 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence            456666889999999999999988899999994321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.             
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~  165 (267)
T cd06645          89 GGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKS  165 (267)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCccccccc
Confidence                             334678889999999999988   999999999999987766655 2321             


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ...++.++|+||+|+++||+++|..|+........ ...........       +.....   
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~-------~~~~~~---  234 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNFQP-------PKLKDK---  234 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCCCC-------Cccccc---
Confidence                             12356789999999999999999999864322111 11110000000       000000   


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ...+..+.+++..||+.+|++||+++++++
T Consensus       235 ---------------~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         235 ---------------MKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             ---------------CCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence                           012345778999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.90  E-value=1.2e-23  Score=173.85  Aligned_cols=128  Identities=22%  Similarity=0.367  Sum_probs=87.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC-------------------------------
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN-------------------------------  147 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~-------------------------------  147 (268)
                      ..++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+...                               
T Consensus       103 ~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (269)
T cd05087         103 QRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHG  179 (269)
T ss_pred             HHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccc
Confidence            457889999999999988   999999999999998877766 443220                               


Q ss_pred             -----CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhh
Q 044875          148 -----QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG  221 (268)
Q Consensus       148 -----~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  221 (268)
                           .++.++|+||||+++||+++ |+.||........  ......   .......++.+..                 
T Consensus       180 ~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~-----------------  237 (269)
T cd05087         180 NLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYTVR---EQQLKLPKPRLKL-----------------  237 (269)
T ss_pred             cccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHHhh---cccCCCCCCccCC-----------------
Confidence                 13678999999999999996 9999975332211  111000   0000111111110                 


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          222 QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       222 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                         .....+.+++..|| .+|++|||+++|+..|+
T Consensus       238 ---~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         238 ---PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             ---CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence               12334677888899 58999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.90  E-value=5.6e-24  Score=178.20  Aligned_cols=164  Identities=23%  Similarity=0.379  Sum_probs=118.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e   94 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME   94 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence            566777899999999999999987799999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         .....++.+++.|++|||+ .+   ++|+||+|+||+++.+...++ +|+..         
T Consensus        95 ~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~  171 (296)
T cd06618          95 LMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAK  171 (296)
T ss_pred             ccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccCCCcc
Confidence                               2235789999999999997 46   999999999999998877766 33321         


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..++.++|+||||+++||+++|+.||.........+........ .....         
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~---------  241 (296)
T cd06618         172 TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP-PSLPP---------  241 (296)
T ss_pred             cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC-CCCCC---------
Confidence                                 12567899999999999999999998642211111111111000 00000         


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                       .                .....++.+++.+||+.||++||++.+++..
T Consensus       242 -~----------------~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         242 -N----------------EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             -C----------------CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             0                0234568889999999999999999999853

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.90  E-value=6e-24  Score=184.75  Aligned_cols=127  Identities=25%  Similarity=0.368  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~~  150 (268)
                      .++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+..                             ..++
T Consensus       243 ~~~~qi~~aL~~LH~~~---ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  319 (401)
T cd05107         243 GFSYQVANGMEFLASKN---CVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYT  319 (401)
T ss_pred             HHHHHHHHHHHHHhcCC---cCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCC
Confidence            46679999999999987   999999999999998777766 44432                             2246


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++|+||||++++|+++ |..||....... ............            ..+                .....+
T Consensus       320 ~~~DvwslGvil~e~l~~g~~P~~~~~~~~-~~~~~~~~~~~~------------~~p----------------~~~~~~  370 (401)
T cd05107         320 TLSDVWSFGILLWEIFTLGGTPYPELPMNE-QFYNAIKRGYRM------------AKP----------------AHASDE  370 (401)
T ss_pred             cHhHHHHHHHHHHHHHHcCCCCCCCCCchH-HHHHHHHcCCCC------------CCC----------------CCCCHH
Confidence            78999999999999998 888886432111 111111111000            000                023456


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      +.+++..||+.+|+.||++++|+..|+.+.
T Consensus       371 l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         371 IYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.90  E-value=3.2e-24  Score=183.55  Aligned_cols=159  Identities=28%  Similarity=0.468  Sum_probs=125.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      ++|...+.||+|+||.||||+-..+.+.||+|                                                
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            46666788999999999999999999999999                                                


Q ss_pred             --------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           93 --------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        93 --------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                    .++++....++.++..||.|||+..   |+|||+||.|||+..++..|+ +|+             
T Consensus        82 ~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vlt  158 (808)
T KOG0597|consen   82 YAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLT  158 (808)
T ss_pred             hhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccCceeee
Confidence                          2333567889999999999999988   999999999999999998888 333             


Q ss_pred             --------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          145 --------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       145 --------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    .+.+|+..+|.||+||++||+.+|++||..     ..+.+.++....+....              
T Consensus       159 sikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv~~I~~d~v~~--------------  219 (808)
T KOG0597|consen  159 SIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLVKSILKDPVKP--------------  219 (808)
T ss_pred             eccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHHHHHhcCCCCC--------------
Confidence                          346788999999999999999999999974     23444444333221111              


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  +......+.++....++.||..|-+-.+++.
T Consensus       220 ------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  220 ------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             ------------cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence                        0134455778888899999999999888763

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.90  E-value=8.2e-24  Score=173.32  Aligned_cols=159  Identities=19%  Similarity=0.296  Sum_probs=118.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.+|++....+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            36677899999999999999988899999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------  144 (268)
                                          .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +++           
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence                                234678899999999999988   999999999999988776665 222           


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      .+..++.++|+||||++++|+++|+.|+......     .........            ....
T Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~------------~~~~  220 (256)
T cd08218         158 ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-----NLVLKIIRG------------SYPP  220 (256)
T ss_pred             hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-----HHHHHHhcC------------CCCC
Confidence                            1234567899999999999999999998642111     111100000            0000


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   .+.....++.+++.+||+.+|++||++.+|++
T Consensus       221 -------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         221 -------------VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             -------------CcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence                         00133456888999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.90  E-value=8.8e-24  Score=182.06  Aligned_cols=111  Identities=23%  Similarity=0.399  Sum_probs=94.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            467888999999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||..         
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~  157 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT  157 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence                                345678889999999999988   999999999999998877766 55532         


Q ss_pred             -----------------------------------------------------CCcCccccEeechHHHHHHHhCCCCCC
Q 044875          147 -----------------------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       147 -----------------------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                                                                           ..++.++|||||||++||+++|+.||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~  237 (363)
T cd05628         158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (363)
T ss_pred             cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence                                                                 235778999999999999999999997


Q ss_pred             c
Q 044875          174 D  174 (268)
Q Consensus       174 ~  174 (268)
                      .
T Consensus       238 ~  238 (363)
T cd05628         238 S  238 (363)
T ss_pred             C
Confidence            5

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.90  E-value=2e-24  Score=183.71  Aligned_cols=162  Identities=18%  Similarity=0.282  Sum_probs=116.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            467788899999999999999988999999993321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+        
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~  157 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM  157 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence                                 233557789999999999988   999999999999998887777 33321        


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                                ..++.++||||||+++||+++|+.||....... .+............+.  + 
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~--~-  233 (330)
T cd05601         158 VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAK-TYNNIMNFQRFLKFPE--D-  233 (330)
T ss_pred             eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHH-HHHHHHcCCCccCCCC--C-
Confidence                                      234578999999999999999999997532211 0111100000000000  0 


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                             ......+..++..|++ +|.+||++.++++
T Consensus       234 -----------------------~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         234 -----------------------PKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             -----------------------CCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence                                   0123446778888998 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.90  E-value=3.8e-24  Score=181.61  Aligned_cols=151  Identities=26%  Similarity=0.347  Sum_probs=111.3

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            358999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.+...++ |||.+              
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~  157 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFC  157 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCccccc
Confidence                           233457889999999999988   999999999999998877776 55432              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++||||+|+++||+++|+.||.......  ........ +...    .+             
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~i~~~-~~~~----~~-------------  217 (325)
T cd05602         158 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE--MYDNILNK-PLQL----KP-------------  217 (325)
T ss_pred             CCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH--HHHHHHhC-CcCC----CC-------------
Confidence                         346678999999999999999999997532211  10110000 0000    00             


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDV  251 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v  251 (268)
                                 .....+.+++..|++.||.+||++.+.
T Consensus       218 -----------~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         218 -----------NITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             -----------CCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence                       223457788889999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.90  E-value=7.5e-24  Score=176.56  Aligned_cols=165  Identities=22%  Similarity=0.371  Sum_probs=118.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||++....+++.+|+|.+..                                              
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~   81 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL   81 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence            5566889999999999999988899999994321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ ||+.          
T Consensus        82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05630          82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI  158 (285)
T ss_pred             cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCccc
Confidence                                234567889999999999988   999999999999998776665 4432          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ...++.++|+||||+++||+++|+.||........ ...... .. ......            
T Consensus       159 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~~~-~~-~~~~~~------------  223 (285)
T cd05630         159 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEVER-LV-KEVQEE------------  223 (285)
T ss_pred             cCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHHHh-hh-hhhhhh------------
Confidence                            23467789999999999999999999975321100 000000 00 000000            


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH--HHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN--NLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~--~L~~  257 (268)
                                  ........+.+++..||+.||++|||     +.++++  ++.+
T Consensus       224 ------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         224 ------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             ------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence                        00123345778899999999999999     788885  4444

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=5.7e-24  Score=180.83  Aligned_cols=105  Identities=25%  Similarity=0.434  Sum_probs=88.6

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+..              
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  157 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFC  157 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCCCcccccc
Confidence                           345678899999999999988   999999999999998877766 44422              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                   ..++.++|+||||+++||+++|+.||+.
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         158 GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCccc
Confidence                         3457789999999999999999999964

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.90  E-value=1.3e-23  Score=177.11  Aligned_cols=111  Identities=29%  Similarity=0.497  Sum_probs=91.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            467888999999999999999988889999983321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                        .....++.+++.||.|||+ .+   ++|+||||+||+++.++..++ +|+.           
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  157 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccccccc
Confidence                              2346788999999999998 35   999999999999998776666 3332           


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                    +..++.++|+||||++++|+++|+.|+..
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~  200 (308)
T cd06615         158 FVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPP  200 (308)
T ss_pred             CCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence                          23467789999999999999999999864

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.90  E-value=5.5e-24  Score=177.67  Aligned_cols=187  Identities=16%  Similarity=0.287  Sum_probs=120.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|.....||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            567778899999999999999988889999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||+|+||+++.++..++ +|+..           
T Consensus        85 ~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  161 (291)
T cd07844          85 LDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYS  161 (291)
T ss_pred             CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCCcccc
Confidence                              234567789999999999988   999999999999998877766 33311           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh---Cccchhhhcchh-hh-c
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA---VPDQISEVLDPL-FV-A  204 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~-~~-~  204 (268)
                                       ..++.++||||+|+++||+++|+.||.........+.......   .+.......+.. .. .
T Consensus       162 ~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07844         162 NEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPY  241 (291)
T ss_pred             ccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccc
Confidence                             2356789999999999999999999965332111111111100   000000000000 00 0


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ................   ......+.+++..|++.+|++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         242 SFPFYPPRPLINHAPR---LDRIPHGEELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             cccccCChhHHHhCcC---CCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence            0000000000000000   011256788999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=4.6e-24  Score=177.17  Aligned_cols=163  Identities=20%  Similarity=0.340  Sum_probs=119.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||.|+||.||+|....++..+|+|.+.                                            
T Consensus         4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            456777888999999999999998788999999332                                            


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                        ......++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +|+.           
T Consensus        84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (280)
T cd06611          84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR  160 (280)
T ss_pred             cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhccccccc
Confidence                              1345678899999999999988   999999999999998776666 3321           


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ...++.++|+||||+++||+++|+.||....... ........ .+.   ....     
T Consensus       161 ~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~-~~~---~~~~-----  230 (280)
T cd06611         161 DTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILKS-EPP---TLDQ-----  230 (280)
T ss_pred             ceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhcC-CCC---CcCC-----
Confidence                                 1235568999999999999999999987532211 11111100 000   0000     


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        +......+.+++..||+.+|++||++.++++
T Consensus       231 ------------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         231 ------------------PSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             ------------------cccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence                              0123345778899999999999999999984

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.90  E-value=2.8e-24  Score=197.33  Aligned_cols=123  Identities=24%  Similarity=0.467  Sum_probs=86.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------------------  146 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------------------  146 (268)
                      ..+++.+|++|++|+|+.+   ++||||||.||.++++...|+ +||++                               
T Consensus       699 ~wrLFreIlEGLaYIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~  775 (1351)
T KOG1035|consen  699 AWRLFREILEGLAYIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQ  775 (1351)
T ss_pred             HHHHHHHHHHHHHHHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccc
Confidence            4678999999999999999   999999999999999888888 33321                               


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..|+.|+|+||+|||++||+.   ||...-.....+.+......|.. ..++++         
T Consensus       776 VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~---------  842 (1351)
T KOG1035|consen  776 VGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDP---------  842 (1351)
T ss_pred             cceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccc---------
Confidence                             258999999999999999985   34421111111222221122222 222333         


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ....-..++.|.++.||.+|||+.++++
T Consensus       843 ----------------~~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  843 ----------------EHPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             ----------------cchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence                            1223467888899999999999999984

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.90  E-value=5.2e-24  Score=180.47  Aligned_cols=149  Identities=23%  Similarity=0.330  Sum_probs=110.4

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||+|+...+++.+|+|.+..                                                  
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            368999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..              
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  157 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFC  157 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCcccccc
Confidence                           234567889999999999988   999999999999998887776 44421              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++|||||||++||+++|..||.....     ............ .         .+      
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~-~---------~~------  216 (321)
T cd05603         158 GTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHKPL-Q---------LP------  216 (321)
T ss_pred             CCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcCCC-C---------CC------
Confidence                         3467789999999999999999999975321     111111000000 0         00      


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS  249 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~  249 (268)
                                ......+.+++..|++.||.+||+..
T Consensus       217 ----------~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         217 ----------GGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ----------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence                      02234578899999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.90  E-value=1.1e-23  Score=173.09  Aligned_cols=159  Identities=21%  Similarity=0.288  Sum_probs=117.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||.|+||.||++....++..+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            35667889999999999999988889999994321                                             


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHh-----hcCCCCeeecCCCCCccccCCCCceee-eec--
Q 044875           97 ------------------------CTRLSIAIDVASALEYLH-----HHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--  144 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh-----~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--  144 (268)
                                              .....++.+++.|+.|||     +.+   ++|+||+|+||+++.+...++ +++  
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence                                    233567889999999999     655   999999999999998877766 222  


Q ss_pred             -------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          145 -------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       145 -------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                               ....++.++|+||||++++++++|..||.....  ..+...........+     
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~-----  230 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKEGKFRRI-----  230 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhcCCCCCC-----
Confidence                                     112356779999999999999999999975321  111111111110000     


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                             +......+.+++..||+.+|++||++.+|++
T Consensus       231 -----------------------~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         231 -----------------------PYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             -----------------------ccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                                   0133456889999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.90  E-value=4e-24  Score=179.52  Aligned_cols=193  Identities=15%  Similarity=0.256  Sum_probs=124.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..||+|.+..                                            
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            457778899999999999999988889999994431                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..           
T Consensus        86 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  162 (301)
T cd07873          86 LDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYS  162 (301)
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCccc
Confidence                              224557789999999999988   999999999999998877766 33321           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh---hhCccchhhhcchhhhcCC
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK---MAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~~~~  206 (268)
                                       ..++.++||||||+++||+++|+.||........ ......   ...........+.......
T Consensus       163 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (301)
T cd07873         163 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ-LHFIFRILGTPTEETWPGILSNEEFKSY  241 (301)
T ss_pred             ccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCChhhchhhhcccccccc
Confidence                             2256689999999999999999999975332111 000000   0000111111110000000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVKS  260 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~~  260 (268)
                      .  .+... ..............+.+++..|++.||.+|||++++++  ++..+.+
T Consensus       242 ~--~~~~~-~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~  294 (301)
T cd07873         242 N--YPKYR-ADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE  294 (301)
T ss_pred             c--cCccc-cccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence            0  00000 00000000123445788999999999999999999986  5554443

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.90  E-value=8.2e-24  Score=174.54  Aligned_cols=125  Identities=25%  Similarity=0.408  Sum_probs=89.6

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-----ceee-eecc---------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-----TTHV-EYGM---------------------------  145 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-----~~~i-e~~~---------------------------  145 (268)
                      ...++.+++.|+.|||+.+   ++|+||+|+||+++.+.     ..++ +|+.                           
T Consensus       108 ~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~  184 (269)
T cd05044         108 LLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPES  184 (269)
T ss_pred             HHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHH
Confidence            3558889999999999987   99999999999998765     3443 3332                           


Q ss_pred             --CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhc
Q 044875          146 --GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQ  222 (268)
Q Consensus       146 --~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  222 (268)
                        ...++.++||||||+++||+++ |..||......  ............            ..                
T Consensus       185 ~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~------------~~----------------  234 (269)
T cd05044         185 LLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVTAGGRL------------QK----------------  234 (269)
T ss_pred             HccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHhcCCcc------------CC----------------
Confidence              2345778999999999999998 99998743221  111111100000            00                


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          223 IQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       223 ~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      ....+..+.+++.+||+.+|++||++.++.+.|+
T Consensus       235 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         235 PENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             cccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            0133456789999999999999999999999886

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.5e-23  Score=174.68  Aligned_cols=162  Identities=19%  Similarity=0.344  Sum_probs=117.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||++....++..+|+|.+..                                             
T Consensus         2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~   81 (286)
T cd06622           2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM   81 (286)
T ss_pred             hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence            56667889999999999999988899999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                          .....++.+++.|+.|||+. +   ++|+||||+||+++.+...++ +|+..        
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (286)
T cd06622          82 DAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA  158 (286)
T ss_pred             CCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence                                23467888999999999973 5   999999999999998776666 44422        


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                             ..++.++|+||||+++||+++|+.||.......  ...............       
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~-------  229 (286)
T cd06622         159 KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN--IFAQLSAIVDGDPPT-------  229 (286)
T ss_pred             ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh--HHHHHHHHhhcCCCC-------
Confidence                                   123678999999999999999999996432111  111100000000000       


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        .+.....++..++..||+.+|++||++.++++
T Consensus       230 ------------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         230 ------------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             ------------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence                              01134556788999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.90  E-value=6.3e-24  Score=177.37  Aligned_cols=114  Identities=22%  Similarity=0.457  Sum_probs=94.0

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ++++|...+.||+|+||.||+|....++..+|+|.+..                                          
T Consensus         3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~   82 (291)
T cd07870           3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF   82 (291)
T ss_pred             ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence            45778888999999999999999987899999994421                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..         
T Consensus        83 e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          83 EYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT  159 (291)
T ss_pred             ecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence                                234567889999999999988   999999999999998877766 34321         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                         ..++.++||||||++++|+++|+.||...
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~  207 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV  207 (291)
T ss_pred             CCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence                               12466789999999999999999999754

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=5.2e-24  Score=177.32  Aligned_cols=176  Identities=25%  Similarity=0.337  Sum_probs=120.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||++....++..+|+|.+..                                            
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            445566889999999999999988899999983211                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                        .....++.+++.++.|||+ .+   ++|+|++|+||+++.+...++ +++.           
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~  161 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADT  161 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhccCc
Confidence                              2345788899999999997 35   999999999999998776666 3332           


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ...++.++|+||||++++|+++|+.||.........      ...+..+.+.+.........    
T Consensus       162 ~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~----  231 (284)
T cd06620         162 FVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDG------QDDPMGILDLLQQIVQEPPP----  231 (284)
T ss_pred             cccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhh------hhhhhHHHHHHHHHhhccCC----
Confidence                          234567899999999999999999999754322110      00000011111110000000    


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      ..        .....+.++.+++..||+.||++|||+.++++...-
T Consensus       232 ~~--------~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~  269 (284)
T cd06620         232 RL--------PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPF  269 (284)
T ss_pred             CC--------CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence            00        000244568889999999999999999999976433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.90  E-value=4e-24  Score=184.58  Aligned_cols=165  Identities=18%  Similarity=0.247  Sum_probs=119.8

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||++....++..+|+|.+..                                          
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence            34678888999999999999999988899999994421                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +||..        
T Consensus       121 v~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         121 VMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc
Confidence                                 234557789999999999988   999999999999998887777 44321        


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++|+|||||++||+++|+.||....... ..............+..     
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~-----  271 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMDHKNSLTFPDD-----  271 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH-HHHHHHcCCCcCCCCCc-----
Confidence                                    125678999999999999999999997532110 01111000000000000     


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCC--CCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE--RMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~~v~~  253 (268)
                                           ...+..+.+++..|++.+|.+  ||++.++++
T Consensus       272 ---------------------~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         272 ---------------------IEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             ---------------------CCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence                                 022445778889999999987  999999974

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.90  E-value=1.1e-23  Score=173.52  Aligned_cols=159  Identities=18%  Similarity=0.374  Sum_probs=114.2

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|... ++..+|+|.+..                                              
T Consensus         2 ~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           2 WTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             ccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            556688999999999999875 678899994321                                              


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.+++|||+.+   ++|+||+|+||+++.+...++ +|+.         
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  157 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGL  157 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhhccc
Confidence                                 234567889999999999988   999999999999998776666 3321         


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              ...++.++|+||||++++|+++|..||........ ........  ...     +.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~-~~~~~~~~--~~~-----~~  229 (265)
T cd06631         158 HGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAA-MFYIGAHR--GLM-----PR  229 (265)
T ss_pred             cccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHH-HHHhhhcc--CCC-----CC
Confidence                                    12346789999999999999999999975321110 00000000  000     00


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .    .                ......+..++..||+.+|++||++.++++
T Consensus       230 ~----~----------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         230 L----P----------------DSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             C----C----------------CCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0    0                023455788999999999999999999874

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.90  E-value=7.4e-24  Score=177.15  Aligned_cols=187  Identities=19%  Similarity=0.274  Sum_probs=120.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.+++|.+.                                             
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            46777788999999999999998889999998332                                             


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                          +.....++.+++.||+|||+.+   ++|+||+|+||+++.++..++ +++.         
T Consensus        85 ~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  161 (293)
T cd07843          85 MEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK  161 (293)
T ss_pred             ehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence                                1234678899999999999988   999999999999998877766 2321         


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-c--cchhhhcchhhh
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-P--DQISEVLDPLFV  203 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~d~~~~  203 (268)
                                         ...++.++|+||+|++++|+++|..||....... .......... +  .......+  +.
T Consensus       162 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~  238 (293)
T cd07843         162 PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSE--LP  238 (293)
T ss_pred             ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhc--cc
Confidence                               1124678999999999999999999987432211 1111110000 0  00000000  00


Q ss_pred             cCCCccchhhhHHhhhhhchHH-HHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQE-SLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...................... ....+.+++..||+.||++|||+.++++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            0000000000000111111111 3556788999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.90  E-value=9.6e-24  Score=175.40  Aligned_cols=155  Identities=20%  Similarity=0.297  Sum_probs=112.9

Q ss_pred             cccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------------   96 (268)
                      .||+|+||.||++....+++.+|+|.+..                                                   
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            48999999999999988899999993311                                                   


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+.              
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  157 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCC
Confidence                            334668899999999999988   999999999999988776665 3332              


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  +..++.++|+||||++++|+++|..||.....................+                   
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------  218 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL-------------------  218 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC-------------------
Confidence                        1235778999999999999999999997532211110000000000000                   


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                               +.....++..++..||+.||++||     |++++++
T Consensus       219 ---------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         219 ---------PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             ---------ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence                     013345678888999999999999     5888875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.90  E-value=1.2e-23  Score=175.00  Aligned_cols=183  Identities=20%  Similarity=0.317  Sum_probs=118.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||.|+||.||+|....+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            46777889999999999999988899999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|++|||+.+   ++|+|++|+||+++.++..++ +|+.           
T Consensus        81 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  157 (284)
T cd07860          81 LHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY  157 (284)
T ss_pred             cccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc
Confidence                               224567889999999999988   999999999999998877766 2221           


Q ss_pred             ----------------C-CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-chhhhcc--hhhhc
Q 044875          146 ----------------G-NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-QISEVLD--PLFVA  204 (268)
Q Consensus       146 ----------------~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d--~~~~~  204 (268)
                                      + ..++.++|+||||++++|+++|+.||....... ......... .+. ...+...  +....
T Consensus       158 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07860         158 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPDYKP  236 (284)
T ss_pred             ccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHHHHh
Confidence                            1 124678999999999999999999986432211 111111111 110 0000000  00000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...    ......... .......++.+++..||+.||++||++++++.
T Consensus       237 ~~~----~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         237 SFP----KWARQDFSK-VVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             hcc----cccccCHHH-HcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            000    000000000 00122345678999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.90  E-value=3.8e-24  Score=181.59  Aligned_cols=150  Identities=27%  Similarity=0.361  Sum_probs=111.5

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.||+|+||.||++....+++.+|+|.+..                                                  
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            358999999999999988899999994321                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..              
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~  157 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFC  157 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCccccc
Confidence                           335668899999999999988   999999999999998887776 44432              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++||||||+++||+++|..||......     ...........  .+.+             
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~~~~~~--~~~~-------------  217 (325)
T cd05604         158 GTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNILHKPL--VLRP-------------  217 (325)
T ss_pred             CChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHHHcCCc--cCCC-------------
Confidence                         34678899999999999999999999753211     11111000000  0000             


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~  250 (268)
                                 .....+.+++..|++.+|.+||++.+
T Consensus       218 -----------~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         218 -----------GASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             -----------CCCHHHHHHHHHHhccCHHhcCCCCC
Confidence                       22345678899999999999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.90  E-value=1.7e-23  Score=178.21  Aligned_cols=128  Identities=27%  Similarity=0.431  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------------------------CCCcC
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------------------------GNQFS  150 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~~  150 (268)
                      .++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+.                             ...++
T Consensus       138 ~~~~qi~~al~~LH~~g---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  214 (334)
T cd05100         138 SCAYQVARGMEYLASQK---CIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYT  214 (334)
T ss_pred             HHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcC
Confidence            46789999999999988   999999999999998776666 3321                             23456


Q ss_pred             ccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLIT  229 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (268)
                      .++||||||+++||+++ |..||.....+.  ...........   +         .                +..++..
T Consensus       215 ~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~~~~~---~---------~----------------~~~~~~~  264 (334)
T cd05100         215 HQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--LFKLLKEGHRM---D---------K----------------PANCTHE  264 (334)
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCCCCCHHH--HHHHHHcCCCC---C---------C----------------CCCCCHH
Confidence            78999999999999998 888886532111  11111100000   0         0                0133456


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      +.+++..||+.+|++||++.++++.|+.+...
T Consensus       265 l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~  296 (334)
T cd05100         265 LYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV  296 (334)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence            88999999999999999999999999988744

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=2.3e-23  Score=173.75  Aligned_cols=171  Identities=25%  Similarity=0.308  Sum_probs=120.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||.|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            356777889999999999999988899999993321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.+|.|||+.+   ++|+|++|+||+++.+...++ +|+.      
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  157 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN  157 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence                                    123468889999999999988   999999999999998776665 3332      


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         +..++.++||||+|+++||+++|+.|+...........+............     +....
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  232 (287)
T cd06621         158 SLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPE-----LKDEP  232 (287)
T ss_pred             cccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchh-----hccCC
Confidence                               234677899999999999999999999754221111111111100000000     00000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .              ........+.+++.+||+.+|++|||+.+++.
T Consensus       233 ~--------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         233 G--------------NGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             C--------------CCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            0              00023456889999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.90  E-value=1.9e-23  Score=176.59  Aligned_cols=106  Identities=21%  Similarity=0.401  Sum_probs=82.6

Q ss_pred             CCcccCCCcceEEEEEec--CCCeEEEEeecCc-----------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILD--PDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ..+||+|+||.||+|...  .+++.+|+|.+..                                               
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~~   85 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD   85 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCCC
Confidence            467999999999999864  3567899994321                                               


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC----CCCceee-eeccC---
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD----NDMTTHV-EYGMG---  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~----~~~~~~i-e~~~~---  146 (268)
                                            .....++.|++.||.|||+.+   ++||||||+||++.    .+...++ |||.+   
T Consensus        86 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~  162 (317)
T cd07868          86 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF  162 (317)
T ss_pred             HHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCceecc
Confidence                                  113467899999999999988   99999999999994    3334444 33321   


Q ss_pred             ----------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                                  ..++.++||||+||+++|+++|++||..
T Consensus       163 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         163 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence                                        2367789999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.90  E-value=1e-23  Score=195.08  Aligned_cols=169  Identities=21%  Similarity=0.304  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            567788999999999999999988899999994421                                            


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.+++.||+|||+.+   ++||||||+||+++.++..++ |||
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence                                           012457789999999999988   999999999999988776665 333


Q ss_pred             c---------------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccc
Q 044875          145 M---------------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG  179 (268)
Q Consensus       145 ~---------------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~  179 (268)
                      .                                             +..++.++|||||||+++|+++|+.||.......
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k  238 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK  238 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence            2                                             1235678999999999999999999997522211


Q ss_pred             cchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-hHHHHHHHHHh
Q 044875          180 LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-TSDVVNNLQTV  258 (268)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~~v~~~L~~l  258 (268)
                      ...  ......+.....                          ..+.+..+.+++..|++.||++||+ ++++.+.|+..
T Consensus       239 i~~--~~~i~~P~~~~p--------------------------~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~  290 (932)
T PRK13184        239 ISY--RDVILSPIEVAP--------------------------YREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH  290 (932)
T ss_pred             hhh--hhhccChhhccc--------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            100  000000000000                          0133455788999999999999965 66677777766


Q ss_pred             HH
Q 044875          259 KS  260 (268)
Q Consensus       259 ~~  260 (268)
                      .+
T Consensus       291 lq  292 (932)
T PRK13184        291 LQ  292 (932)
T ss_pred             Hh
Confidence            44

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.90  E-value=5.8e-24  Score=181.48  Aligned_cols=159  Identities=19%  Similarity=0.244  Sum_probs=116.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCC-eEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQ-TVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK~l~~-------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++ ..+|+|.+..                                           
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            46777889999999999999875444 6899994321                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+|||++.++..++ +||.+        
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~  186 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTY  186 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecCCCcc
Confidence                                 234678899999999999988   999999999999998887777 45432        


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++|+|||||++||+++|..||......  ........... .++.              
T Consensus       187 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~--~~~~~i~~~~~-~~p~--------------  249 (340)
T PTZ00426        187 TLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL--LIYQKILEGII-YFPK--------------  249 (340)
T ss_pred             eecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH--HHHHHHhcCCC-CCCC--------------
Confidence                            23577899999999999999999999753211  11111110000 0000              


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                    .....+.+++..|++.||++|+     +++++.+
T Consensus       250 --------------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        250 --------------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             --------------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence                          1123467889999999999995     7888764

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.90  E-value=1.4e-23  Score=175.49  Aligned_cols=184  Identities=18%  Similarity=0.239  Sum_probs=119.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|+..+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            46778889999999999999998889999999321                                             


Q ss_pred             ----------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eecc
Q 044875           96 ----------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGM  145 (268)
Q Consensus        96 ----------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~  145 (268)
                                                  +.....++.+++.||.|||+.+   ++||||+|+||+++. +...++ +|+.
T Consensus        81 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeeccc
Confidence                                        1233567889999999999988   999999999999998 655555 3332


Q ss_pred             C----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc--ch
Q 044875          146 G----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD--QI  194 (268)
Q Consensus       146 ~----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~  194 (268)
                      +                            ..++.++|+||||++++|+++|..||........ +...... ..+.  ..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  236 (295)
T cd07837         158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ-LLHIFKLLGTPTEQVW  236 (295)
T ss_pred             ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH-HHHHHHHhCCCChhhC
Confidence            1                            2356789999999999999999999875322111 1111110 0000  00


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....+........    ...... ..........++.+++..||+.||.+||++.+++.
T Consensus       237 ~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         237 PGVSKLRDWHEFP----QWKPQD-LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             cchhhccchhhcC----cccchh-HHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            0000000000000    000000 00001134566889999999999999999999874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=1.8e-23  Score=171.28  Aligned_cols=157  Identities=29%  Similarity=0.517  Sum_probs=115.8

Q ss_pred             CcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------------   96 (268)
                      +.||+|+||.||+|....+   +..+++|.+..                                               
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            3689999999999999755   88899993221                                               


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.      
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence                                    234678899999999999988   999999999999999877766 2221      


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                             ...++.++|+||+|++++|+++ |..||......  .+...........        
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~--------  227 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE--EVLEYLRKGYRLP--------  227 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCC--------
Confidence                                   1346778999999999999999 69998764211  1111111100000        


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                                          .+...+..+.+++..||+.||++|||+.+++..|+
T Consensus       228 --------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         228 --------------------KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             --------------------CCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence                                00133456889999999999999999999998773

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.90  E-value=1.3e-23  Score=173.62  Aligned_cols=163  Identities=23%  Similarity=0.393  Sum_probs=115.7

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   82 (272)
T cd06629           3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEY   82 (272)
T ss_pred             eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCc
Confidence            4456789999999999999887899999994320                                              


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +++..    
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~  159 (272)
T cd06629          83 LSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGISKKSD  159 (272)
T ss_pred             eEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccccccc
Confidence                                     234557889999999999988   999999999999988776666 22211    


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                                 ..++.++|+||||++++|+++|..|+......    ......... .....++
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~-~~~~~~~  234 (272)
T cd06629         160 DIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----AAMFKLGNK-RSAPPIP  234 (272)
T ss_pred             ccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----HHHHHhhcc-ccCCcCC
Confidence                                       12577899999999999999999998642111    111110000 0000000


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..                    ...+.+..+.+++..||+.+|+.||++.+|++
T Consensus       235 ~~--------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         235 PD--------------------VSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             cc--------------------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            00                    00133566888999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.90  E-value=8.1e-24  Score=176.98  Aligned_cols=156  Identities=21%  Similarity=0.355  Sum_probs=114.8

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      ..||+|+||.||++....++..+|+|.+..                                                  
T Consensus        28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~  107 (292)
T cd06658          28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT  107 (292)
T ss_pred             hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence            669999999999999988899999994321                                                  


Q ss_pred             ----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------
Q 044875           97 ----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------  146 (268)
Q Consensus        97 ----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------  146 (268)
                                .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+..                   
T Consensus       108 ~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y  184 (292)
T cd06658         108 DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYW  184 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccc
Confidence                      345678899999999999988   999999999999998877766 34321                   


Q ss_pred             --------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhh
Q 044875          147 --------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENI  218 (268)
Q Consensus       147 --------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  218 (268)
                              ..++.++|+||||++++|+++|+.||.......  .........        .+.....             
T Consensus       185 ~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~~~--------~~~~~~~-------------  241 (292)
T cd06658         185 MAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ--AMRRIRDNL--------PPRVKDS-------------  241 (292)
T ss_pred             cCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcC--------CCccccc-------------
Confidence                    246788999999999999999999987422110  000011000        1100000             


Q ss_pred             hhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          219 KKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       219 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                           ......+..++..||+.||.+|||++++++
T Consensus       242 -----~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         242 -----HKVSSVLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             -----cccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                 012335677888899999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.90  E-value=1e-23  Score=177.44  Aligned_cols=165  Identities=21%  Similarity=0.288  Sum_probs=119.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++.....++.|++|.+..                                            
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            467778899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+..         
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~  157 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT  157 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence                                234567889999999999988   999999999999998776655 44321         


Q ss_pred             ---------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc
Q 044875          147 ---------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ  193 (268)
Q Consensus       147 ---------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  193 (268)
                                                       ..++.++|+||||+++||+++|..||......     +.........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~~~~~  232 (305)
T cd05609         158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQVISDD  232 (305)
T ss_pred             cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcc
Confidence                                             23567899999999999999999998743211     1111100000


Q ss_pred             hhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          194 ISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       194 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      .   ..+..    .                ...+..+..++..||+.||++||++.++.+.|+
T Consensus       233 ~---~~~~~----~----------------~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~  272 (305)
T cd05609         233 I---EWPEG----D----------------EALPADAQDLISRLLRQNPLERLGTGGAFEVKQ  272 (305)
T ss_pred             c---CCCCc----c----------------ccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence            0   00000    0                023455789999999999999999766665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=1.8e-23  Score=161.67  Aligned_cols=159  Identities=21%  Similarity=0.303  Sum_probs=125.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------------   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------------   93 (268)
                      ++|+..+.||.|.||.||.|+...++-.||+|+                                               
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            678889999999999999999998999999992                                               


Q ss_pred             -------------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee----------
Q 044875           94 -------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY----------  143 (268)
Q Consensus        94 -------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~----------  143 (268)
                                         |++.....+..|+|.|+.|+|..+   ++|||+||+|+|++.....++ +|          
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~k  178 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSNK  178 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecCCCC
Confidence                               333556778999999999999988   999999999999998887777 33          


Q ss_pred             ---------------ccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          144 ---------------GMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       144 ---------------~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                     ..+...+.++|+|++|++.+|++.|.+||.... .+..+.......       ..+|        
T Consensus       179 R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~-------~~~p--------  242 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVD-------LKFP--------  242 (281)
T ss_pred             ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcc-------ccCC--------
Confidence                           334567899999999999999999999998644 111111111111       1111        


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ...+....+++..|+..+|.+|.+..+++.
T Consensus       243 ---------------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  243 ---------------STISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             ---------------cccChhHHHHHHHHhccCccccccHHHHhh
Confidence                           133445778899999999999999999875

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.90  E-value=1.6e-23  Score=171.63  Aligned_cols=159  Identities=24%  Similarity=0.382  Sum_probs=115.9

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....++..+++|.+..                                              
T Consensus         2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (258)
T cd06632           2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFL   81 (258)
T ss_pred             ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEE
Confidence            5566889999999999999987889999993211                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.|++|||+.+   ++|+||+|+||+++.+...++ +++.          
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~  158 (258)
T cd06632          82 ELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFA  158 (258)
T ss_pred             EecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccccccc
Confidence                                234567889999999999988   999999999999998877776 3221          


Q ss_pred             ----------------CCC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 ----------------GNQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 ----------------~~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      ... ++.++|+||||++++++++|..||....... .............+.             
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~-------------  224 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRSKELPPIP-------------  224 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHHhcccCCCcC-------------
Confidence                            112 6778999999999999999999987532110 000000000000000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ......+.+++.+||+.+|++||++.+++.
T Consensus       225 ---------------~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         225 ---------------DHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             ---------------CCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence                           022345778899999999999999999874

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=2.5e-24  Score=183.66  Aligned_cols=161  Identities=20%  Similarity=0.356  Sum_probs=120.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|+....||.||.+.||++... +.+.+|+|....                                             
T Consensus       362 ~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE  440 (677)
T KOG0596|consen  362 EYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME  440 (677)
T ss_pred             hhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence            4667788999999999999987 566777761111                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGN----------  147 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~----------  147 (268)
                                         -....+++++..++.+.|.++   |+|.||||.|+|+..++...+|||.+.          
T Consensus       441 ~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  441 CGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             cccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEeeeEEeeeechhcccCcccccee
Confidence                               256789999999999999999   999999999999998888777777541          


Q ss_pred             ------------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhh
Q 044875          148 ------------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEV  197 (268)
Q Consensus       148 ------------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (268)
                                                    +.+.++||||+||++|+|+.|++||.......            .++..+
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~------------aKl~aI  585 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQI------------AKLHAI  585 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHH------------HHHHhh
Confidence                                          25678999999999999999999997532111            123333


Q ss_pred             cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .||.-.=.++..               ....++.++|+.|++.||.+||+..++++
T Consensus       586 ~~P~~~Iefp~~---------------~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  586 TDPNHEIEFPDI---------------PENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             cCCCccccccCC---------------CCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            333211111110               11223899999999999999999999985

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.90  E-value=2.9e-23  Score=170.89  Aligned_cols=165  Identities=22%  Similarity=0.379  Sum_probs=119.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||.|+||.||+|....++..+++|.+..                                            
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            467788899999999999999988889999994431                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.|++|||+.+   ++|+||+|+||+++.+...++ +|+.         
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence                                 123567889999999999988   999999999999998776665 2211         


Q ss_pred             ----------------------CC-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          146 ----------------------GN-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       146 ----------------------~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                            .. .++.++|+||||++++|+++|+.||....... .+...... .+........   
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~---  232 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQN-DPPSLETGAD---  232 (267)
T ss_pred             ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcC-CCCCcCCccc---
Confidence                                  11 46778999999999999999999997543221 11111111 0000000000   


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                          ....+..+.+++..||+.||+.||++++++.
T Consensus       233 --------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         233 --------------------YKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             --------------------cccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence                                0133456788999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=1.7e-23  Score=175.09  Aligned_cols=162  Identities=18%  Similarity=0.303  Sum_probs=118.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+++|.+..                                            
T Consensus        19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~   98 (293)
T cd06647          19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL   98 (293)
T ss_pred             hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence            577778899999999999999877888999994321                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +|+.              
T Consensus        99 ~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~  175 (293)
T cd06647          99 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  175 (293)
T ss_pred             CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceecccccccccccc
Confidence                            234678889999999999988   999999999999988776666 3321              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ...++.++|+||||+++||+++|+.||........ +....... .....   .             
T Consensus       176 ~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~-~~~~~---~-------------  237 (293)
T cd06647         176 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNG-TPELQ---N-------------  237 (293)
T ss_pred             cCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeehhcCC-CCCCC---C-------------
Confidence                         13457789999999999999999999975322111 00000000 00000   0             


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                .......+.+++..||+.+|++||++.+++.
T Consensus       238 ----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  268 (293)
T cd06647         238 ----------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  268 (293)
T ss_pred             ----------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                      0022345778999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.90  E-value=1.1e-23  Score=180.88  Aligned_cols=191  Identities=18%  Similarity=0.281  Sum_probs=123.9

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||++....++..+|+|.+..                                          
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            34778888999999999999999988899999995431                                          


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.      
T Consensus        94 ~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          94 QDVYLVMELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CcEEEEEeccCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence                                    122346789999999999988   999999999999998877766 3332      


Q ss_pred             --------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hC-ccchhhhcchhhh
Q 044875          146 --------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AV-PDQISEVLDPLFV  203 (268)
Q Consensus       146 --------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~-~~~~~~~~d~~~~  203 (268)
                                          +..++.++||||||++++++++|+.||....... ........ +. +..+...+++...
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  249 (353)
T cd07850         171 SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHID-QWNKIIEQLGTPSDEFMSRLQPTVR  249 (353)
T ss_pred             CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhhhh
Confidence                                2346778999999999999999999987432110 01111100 00 0111111111100


Q ss_pred             cCCC----ccc-------hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGE----EEG-------EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~----~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....    ...       +..................+.+++..||+.||++|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         250 NYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             HHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            0000    000       0000000000001134556789999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.90  E-value=1.1e-23  Score=166.04  Aligned_cols=159  Identities=23%  Similarity=0.359  Sum_probs=117.5

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      ...||+|+.|.|++.+...+|...|||.+..                                                 
T Consensus        97 l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs~C  176 (391)
T KOG0983|consen   97 LGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMSTC  176 (391)
T ss_pred             HHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHHHH
Confidence            3568999999999999998999999993322                                                 


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------------  146 (268)
                                    .-.-++...+..||.||.+++  .++|||+||+|||+|..++.|+ |||.+               
T Consensus       177 ~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC  254 (391)
T KOG0983|consen  177 AEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGC  254 (391)
T ss_pred             HHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeecccccccccCC
Confidence                          112345566788999999854  5999999999999999999988 55543               


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                    ..|+..+||||||+.++|+.||..||.....+-..+..... ..|    +.+++..          
T Consensus       255 ~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP----P~L~~~~----------  319 (391)
T KOG0983|consen  255 AAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP----PLLPGHM----------  319 (391)
T ss_pred             ccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC----CCCCccc----------
Confidence                          34778899999999999999999999864433222222222 222    2222211          


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ..+..+.++...|++.|+.+||.-.++++
T Consensus       320 ------------gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  320 ------------GFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             ------------CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence                        12345778888899999999999887764

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.90  E-value=1.7e-23  Score=171.49  Aligned_cols=126  Identities=21%  Similarity=0.402  Sum_probs=91.0

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------------------------GN  147 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------------------------~~  147 (268)
                      ...++.+++.||.|||+.+   ++|+||+|+||+++.+...++ +|+.                              +.
T Consensus        99 ~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  175 (257)
T cd05040          99 LCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTR  175 (257)
T ss_pred             HHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhccc
Confidence            3567789999999999988   999999999999998877666 3331                              13


Q ss_pred             CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHH
Q 044875          148 QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQES  226 (268)
Q Consensus       148 ~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (268)
                      .++.++||||||++++|+++ |..|+.......  ......... ...         . .                +...
T Consensus       176 ~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~-~~~---------~-~----------------~~~~  226 (257)
T cd05040         176 TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDKEG-ERL---------E-R----------------PEAC  226 (257)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhcC-CcC---------C-C----------------CccC
Confidence            45678999999999999998 999986432211  111111000 000         0 0                0123


Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          227 LITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       227 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      +..+.+++..||+.+|++|||+.++++.|.
T Consensus       227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         227 PQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            456888999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=1.4e-23  Score=172.13  Aligned_cols=124  Identities=23%  Similarity=0.364  Sum_probs=87.1

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-------ceee-eecc-----------------------C
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-------TTHV-EYGM-----------------------G  146 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-------~~~i-e~~~-----------------------~  146 (268)
                      .+..++.+++.||.|||+.+   ++|+||||+||+++.+.       ..++ +|+.                       .
T Consensus       102 ~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~  178 (259)
T cd05037         102 WKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPWIAPECIRN  178 (259)
T ss_pred             HHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCccChhhhcC
Confidence            45678899999999999988   99999999999998776       3333 2221                       1


Q ss_pred             C--CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhch
Q 044875          147 N--QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQI  223 (268)
Q Consensus       147 ~--~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  223 (268)
                      .  .++.++|+||||+++||+++ |..|+......  ........  ...         ...                  
T Consensus       179 ~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~--~~~---------~~~------------------  227 (259)
T cd05037         179 GQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQD--QHR---------LPM------------------  227 (259)
T ss_pred             CCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhc--CCC---------CCC------------------
Confidence            2  46778999999999999999 56666543211  11111100  000         000                  


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          224 QESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       224 ~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                       .....+.+++..||+.+|++|||+.++++.|+
T Consensus       228 -~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         228 -PDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             -CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence             01145789999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.90  E-value=5.5e-24  Score=181.46  Aligned_cols=189  Identities=16%  Similarity=0.283  Sum_probs=122.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      +++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   83 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV   83 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence            4678888999999999999999988899999995431                                           


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||+|||+.+   ++||||||+||+++.++..++ +|+.        
T Consensus        84 ~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~  160 (336)
T cd07849          84 YIVQELMETDLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH  160 (336)
T ss_pred             EEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence                                  223457889999999999988   999999999999998776666 2221        


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh---hhCccchhhhcc
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK---MAVPDQISEVLD  199 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d  199 (268)
                                             ...++.++||||+|++++|+++|+.||....... ....+..   ...++......+
T Consensus       161 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         161 DHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             cccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhc
Confidence                                   1235678999999999999999999997532110 0111111   011111111111


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                      ......... .+...... ..........++.+++..||+.||++|||+.++++.
T Consensus       240 ~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         240 LRARNYIKS-LPFKPKVP-WNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             hhhhhHHhh-cCcCCccc-HHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            100000000 00000000 000001234568899999999999999999998863

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.9e-23  Score=181.75  Aligned_cols=112  Identities=23%  Similarity=0.354  Sum_probs=91.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEec--CCCeEEEEeecC-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD--PDQTVVSVRDFK-------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~--~~~~~vavK~l~-------------------------------------------   95 (268)
                      ..|.....||+|+||.||++...  ..+..+++|.+.                                           
T Consensus        92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  171 (392)
T PHA03207         92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYKCD  171 (392)
T ss_pred             CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcCCC
Confidence            46888889999999999999764  245788988332                                           


Q ss_pred             ------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------
Q 044875           96 ------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------  146 (268)
Q Consensus        96 ------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------  146 (268)
                                  +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+                
T Consensus       172 l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~  248 (392)
T PHA03207        172 LFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWS  248 (392)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccc
Confidence                        1345788999999999999988   999999999999998877776 44422                


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                   ..++.++|||||||++||+++|+.||...
T Consensus       249 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~  290 (392)
T PHA03207        249 GTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK  290 (392)
T ss_pred             cccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence                         34677899999999999999999998754

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.89  E-value=2.8e-23  Score=176.54  Aligned_cols=189  Identities=22%  Similarity=0.294  Sum_probs=119.8

Q ss_pred             cccCC--CcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           68 IIGAG--SFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G--~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .||.|  +||+||.+....+++.||+|.+..                                                 
T Consensus         5 ~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~   84 (328)
T cd08226           5 EIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYG   84 (328)
T ss_pred             HhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCC
Confidence            46666  999999999988999999994321                                                 


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee----------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY----------------  143 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~----------------  143 (268)
                                      .....++.+++.||+|||+.+   ++||||||+||+++.+...++ ++                
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (328)
T cd08226          85 SANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV  161 (328)
T ss_pred             CHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc
Confidence                            122368889999999999988   999999999999987765544 11                


Q ss_pred             ------------------ccC--CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--------chh
Q 044875          144 ------------------GMG--NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--------QIS  195 (268)
Q Consensus       144 ------------------~~~--~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--------~~~  195 (268)
                                        ...  ..++.++||||||++++|+++|..||...................+        ...
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (328)
T cd08226         162 YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEES  241 (328)
T ss_pred             ccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhh
Confidence                              001  2256789999999999999999999975432211111110000000        000


Q ss_pred             hhcch-----------hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH--HHHHHhHHHH
Q 044875          196 EVLDP-----------LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV--NNLQTVKSTL  262 (268)
Q Consensus       196 ~~~d~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~--~~L~~l~~~~  262 (268)
                      ...+.           .......   ...............+...+.+++.+||+.||++|||+.+++  .++..+.+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~~  318 (328)
T cd08226         242 RMKNSQSGVDSGIGESVVAAGMT---QTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQT  318 (328)
T ss_pred             hhccchhhhhcccccchhccccc---cccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHhc
Confidence            00000           0000000   000000111112235567789999999999999999999998  4777776653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=1.8e-23  Score=177.32  Aligned_cols=153  Identities=20%  Similarity=0.308  Sum_probs=110.4

Q ss_pred             CcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      +.||+|+||.||++...   .+++.+|+|.+..                                               
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            56999999999999863   3678899994321                                               


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..           
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  158 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTH  158 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccc
Confidence                              223457789999999999988   999999999999998887776 44422           


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++||||||+++||+++|+.||......     ..........        .  ..+   
T Consensus       159 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~~--------~--~~~---  220 (323)
T cd05584         159 TFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKGK--------L--NLP---  220 (323)
T ss_pred             ccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC--------C--CCC---
Confidence                            23567899999999999999999999753211     0011000000        0  000   


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                   ......+.+++..||+.||++||     ++.++++
T Consensus       221 -------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         221 -------------PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             -------------CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence                         02234578899999999999999     6777664

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.89  E-value=2.5e-23  Score=171.44  Aligned_cols=158  Identities=22%  Similarity=0.392  Sum_probs=116.0

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |.....||+|+||.||+|....++..+|+|.+..                                              
T Consensus         2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (267)
T cd06628           2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL   81 (267)
T ss_pred             ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence            4556789999999999999987888999984321                                              


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.      
T Consensus        82 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~  158 (267)
T cd06628          82 NIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISKKLEA  158 (267)
T ss_pred             EEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCccccc
Confidence                                    234578899999999999988   999999999999988776666 3331      


Q ss_pred             ---------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhc
Q 044875          146 ---------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVL  198 (268)
Q Consensus       146 ---------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (268)
                                                 ...++.++|+||+|++++|+++|+.||....... .+.....         ..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~---------~~  228 (267)
T cd06628         159 NSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFKIGE---------NA  228 (267)
T ss_pred             ccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHHHHhc---------cC
Confidence                                       1234668999999999999999999997532111 0100000         00


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+..                    +......+..++..||+.||.+||++.++++
T Consensus       229 ~~~~--------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         229 SPEI--------------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CCcC--------------------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            0000                    0133456788999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.89  E-value=2.2e-23  Score=176.16  Aligned_cols=73  Identities=22%  Similarity=0.429  Sum_probs=58.5

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC----CCCceee-eeccC---------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD----NDMTTHV-EYGMG---------------------------  146 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~----~~~~~~i-e~~~~---------------------------  146 (268)
                      ...++.+++.||.|||+.+   ++||||||+||++.    .+...++ |||.+                           
T Consensus       110 ~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~  186 (317)
T cd07867         110 VKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL  186 (317)
T ss_pred             HHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHH
Confidence            3468889999999999988   99999999999993    3334444 33321                           


Q ss_pred             ----CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ----NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ----~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                          ..++.++||||||+++||+++|++||..
T Consensus       187 ~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         187 LLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             hcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence                2357789999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.6e-24  Score=180.15  Aligned_cols=103  Identities=27%  Similarity=0.411  Sum_probs=86.4

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|+||.||+|....+++.+|+|.+..                                                    
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            6999999999999988899999994321                                                    


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------  146 (268)
                                     .....++.+++.|++|||+.+   ++||||||+||+++.+...++ ||+..              
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  157 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFC  157 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCcc
Confidence                           234567889999999999988   999999999999998877666 44321              


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                    ..++.++||||+|+++||+++|+.||..
T Consensus       158 gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~  199 (330)
T cd05586         158 GTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA  199 (330)
T ss_pred             CCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence                          1357889999999999999999999874

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.89  E-value=2.5e-23  Score=170.30  Aligned_cols=159  Identities=23%  Similarity=0.335  Sum_probs=114.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||++....+++.+|+|.+..                                             
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            35667889999999999999988899999993321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eec----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYG----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~----------  144 (268)
                                          .....++.+++.++.|||+.+   ++|+||+|+||+++.+. ..++ +|+          
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence                                234667889999999999988   99999999999997543 3334 222          


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      ....++.++||||||++++++++|+.|+......  ...............             
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------------  222 (256)
T cd08220         158 AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP--ALVLKIMSGTFAPIS-------------  222 (256)
T ss_pred             ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH--HHHHHHHhcCCCCCC-------------
Confidence                            1233577899999999999999999998643211  111111000000000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ......+.+++..||+.+|++|||+.++++
T Consensus       223 ---------------~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         223 ---------------DRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             ---------------CCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                           023445789999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=4.7e-24  Score=180.51  Aligned_cols=150  Identities=22%  Similarity=0.298  Sum_probs=109.6

Q ss_pred             CcccCCCcceEEEEEe---cCCCeEEEEeecCc-----------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGIL---DPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~---~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      +.||+|+||.||++..   ..+++.+|+|.+..                                               
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            5699999999999876   34688999994321                                               


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                      .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+..             
T Consensus        82 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          82 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence                            345678899999999999988   999999999999998877776 44422             


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                    ..++.++||||||+++||+++|+.||......  .......... ..++                 
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~i~~~~-~~~p-----------------  218 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK--ETMTMILKAK-LGMP-----------------  218 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH--HHHHHHHcCC-CCCC-----------------
Confidence                          23577899999999999999999999753211  1111000000 0000                 


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~  250 (268)
                                 ......+..++..||+.||++||++.+
T Consensus       219 -----------~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         219 -----------QFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             -----------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence                       022345778889999999999999655

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.89  E-value=1.1e-23  Score=187.44  Aligned_cols=158  Identities=17%  Similarity=0.212  Sum_probs=115.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCC-CeEEEEeecC----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPD-QTVVSVRDFK----------------------------------------------   95 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~-~~~vavK~l~----------------------------------------------   95 (268)
                      |...+.||+|+||.||++....+ +..+++|...                                              
T Consensus        69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~  148 (478)
T PTZ00267         69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS  148 (478)
T ss_pred             EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence            67778999999999999988766 6788888221                                              


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+         
T Consensus       149 gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence                               1233457889999999999988   999999999999998887776 44322         


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++|||||||+++|+++|+.||......  .+............            
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~--~~~~~~~~~~~~~~------------  291 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR--EIMQQVLYGKYDPF------------  291 (478)
T ss_pred             ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCC------------
Confidence                                33677899999999999999999999642211  11111000000000            


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      +......+.+++..||+.||+.||++.+++.
T Consensus       292 ----------------~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        292 ----------------PCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             ----------------CccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence                            0023345788999999999999999999874

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.89  E-value=3.2e-23  Score=170.45  Aligned_cols=162  Identities=25%  Similarity=0.392  Sum_probs=116.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||+|....++..+++|.+..                                             
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            35667889999999999999987889999993321                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +++..           
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence                              344668899999999999988   999999999999998776666 22211           


Q ss_pred             --------------------C---CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 --------------------N---QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 --------------------~---~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                          .   .++.++||||||++++|+++|+.||.......... ..........++..      
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~------  230 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM-FHVGAGHKPPIPDS------  230 (264)
T ss_pred             ccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH-HHHhcCCCCCCCcc------
Confidence                                1   15678999999999999999999997432111111 00011111010000      


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                          ......+.+++..||+.+|++||++.+++.
T Consensus       231 --------------------~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         231 --------------------LQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             --------------------cccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                                022345678899999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=5.2e-23  Score=170.98  Aligned_cols=186  Identities=17%  Similarity=0.247  Sum_probs=117.9

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||+||+|....+++.+++|.+..                                              
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            4456789999999999999987889999994321                                              


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.++.|||+.+   ++|+||+|+||+++.++..++ +|+.            
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (283)
T cd07830          81 EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTD  157 (283)
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCC
Confidence                              234668889999999999988   999999999999998777766 2221            


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh-hcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF-VAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~  209 (268)
                                     ...++.++|+||||++++|+++|+.|+....... ................+.+... .......
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGTPTKQDWPEGYKLASKLGFR  236 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCCCChhhhhhHhhhhcccccc
Confidence                           1235678999999999999999999886432211 1111111000000000000000 0000000


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+....... ..........+.+++..||+.||++||++++++.
T Consensus       237 ~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         237 FPQFAPTSL-HQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             ccccccccH-HHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence            000000000 0001112466889999999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.89  E-value=1.3e-23  Score=176.21  Aligned_cols=157  Identities=22%  Similarity=0.319  Sum_probs=115.2

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      ...||+|+||.||++....++..+|+|.+..                                                 
T Consensus        26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence            3569999999999999987899999994321                                                 


Q ss_pred             -----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------------
Q 044875           97 -----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------------  145 (268)
Q Consensus        97 -----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------------  145 (268)
                                 .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.                   
T Consensus       106 ~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~  182 (297)
T cd06659         106 TDIVSQTRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPY  182 (297)
T ss_pred             HHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCcc
Confidence                       345678899999999999988   999999999999998877776 3332                   


Q ss_pred             --------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHh
Q 044875          146 --------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       146 --------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                              ...++.++||||||++++|+++|+.||......  ..............        ..             
T Consensus       183 y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~--------~~-------------  239 (297)
T cd06659         183 WMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSPPPKL--------KN-------------  239 (297)
T ss_pred             ccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCCc--------cc-------------
Confidence                    234677899999999999999999998742211  11111110000000        00             


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          218 IKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                           .......+.+++..||+.+|++||+++++++
T Consensus       240 -----~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         240 -----AHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             -----cCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence                 0022344778899999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.9e-23  Score=172.62  Aligned_cols=165  Identities=23%  Similarity=0.372  Sum_probs=120.1

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      .++++|...+.||+|+||.||+|....+++.+++|.+..                                         
T Consensus         3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~   82 (275)
T cd06608           3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD   82 (275)
T ss_pred             CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence            457889999999999999999999987888999993221                                         


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM  145 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~  145 (268)
                                                    .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +++.
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence                                          112347789999999999988   999999999999998776665 2321


Q ss_pred             C--------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc
Q 044875          146 G--------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ  193 (268)
Q Consensus       146 ~--------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  193 (268)
                      .                                ..++.++||||||++++|+++|..|+...... ..+....... .. 
T Consensus       160 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~-~~-  236 (275)
T cd06608         160 SAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPRNP-PP-  236 (275)
T ss_pred             ceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhccC-CC-
Confidence            1                                22466899999999999999999998643211 1111111000 00 


Q ss_pred             hhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          194 ISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       194 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ....                       .......+.+++.+||+.||++|||+.++++
T Consensus       237 --~~~~-----------------------~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         237 --TLKS-----------------------PENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             --CCCc-----------------------hhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence              0000                       0124456889999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.89  E-value=3.1e-23  Score=175.43  Aligned_cols=160  Identities=25%  Similarity=0.359  Sum_probs=118.3

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||+|+||.||+|....++..+|+|.+..                                              
T Consensus        27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  106 (317)
T cd06635          27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY  106 (317)
T ss_pred             hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence            6667889999999999999988899999995431                                              


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.            
T Consensus       107 ~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (317)
T cd06635         107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVG  183 (317)
T ss_pred             CCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCcccccC
Confidence                              234567889999999999988   999999999999998776666 3321            


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ...++.++||||||++++|+++|+.|+....... .+........+..            ..    
T Consensus       184 ~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~------------~~----  246 (317)
T cd06635         184 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTL------------QS----  246 (317)
T ss_pred             CccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHhccCCCC------------CC----
Confidence                          2346778999999999999999999986532111 0111111100000            00    


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                  ......+.+++..||+.+|.+||++.++++.
T Consensus       247 ------------~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         247 ------------NEWSDYFRNFVDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             ------------ccccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence                        0234457889999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.89  E-value=5.6e-23  Score=171.00  Aligned_cols=182  Identities=19%  Similarity=0.262  Sum_probs=119.2

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||+|+||.||+|....++..+|+|.+..                                              
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            4456789999999999999987789999994421                                              


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----  144 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----  144 (268)
                                                .....++.+++.||.|||+.+   ++|+|++|+||+++.+...++ +|+     
T Consensus        81 ~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~~~  157 (287)
T cd07838          81 LTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLARIY  157 (287)
T ss_pred             eEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcceec
Confidence                                      234568899999999999988   999999999999999877766 332     


Q ss_pred             ---------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh-
Q 044875          145 ---------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF-  202 (268)
Q Consensus       145 ---------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-  202 (268)
                                           .+..++.++|+||||++++|+++|.+|+...... ..+.................... 
T Consensus       158 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         158 SFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             cCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCCCccc
Confidence                                 1234577899999999999999998888643221 11111111110000000000000 


Q ss_pred             -hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 -VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       ..........     .......+....+.+++..||+.||++||++.++++
T Consensus       237 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         237 PRSSFPSYTPR-----SFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             chhhccccccc-----chhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence             0000000000     001111234566789999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.89  E-value=2.3e-23  Score=180.65  Aligned_cols=111  Identities=23%  Similarity=0.438  Sum_probs=92.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|...+.||+|+||.||+|....+++.+|+|.+..                                             
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E   81 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD   81 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence            57777899999999999999988899999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+|||++.++..++ ||+..          
T Consensus        82 ~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~  158 (382)
T cd05625          82 YIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSK  158 (382)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccccccc
Confidence                               223557789999999999988   999999999999998877766 55531          


Q ss_pred             ----------------------------------------------------------------CCcCccccEeechHHH
Q 044875          147 ----------------------------------------------------------------NQFSTNGDVYSYGKLL  162 (268)
Q Consensus       147 ----------------------------------------------------------------~~~~~~~Dv~s~G~vl  162 (268)
                                                                                      ..++.++||||+||++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil  238 (382)
T cd05625         159 YYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL  238 (382)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHH
Confidence                                                                            2356789999999999


Q ss_pred             HHHHhCCCCCCcc
Q 044875          163 LEIFTGKRSTSDM  175 (268)
Q Consensus       163 ~el~tg~~p~~~~  175 (268)
                      ||+++|+.||...
T Consensus       239 ~elltG~~Pf~~~  251 (382)
T cd05625         239 YEMLVGQPPFLAQ  251 (382)
T ss_pred             HHHHhCCCCCCCC
Confidence            9999999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.89  E-value=3e-23  Score=172.13  Aligned_cols=158  Identities=24%  Similarity=0.426  Sum_probs=117.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....++..+|+|.+..                                              
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   85 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG   85 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence            5556789999999999999887889999994321                                              


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.++.|||+.+   ++|+||+|+||+++.+...++ +|+.               
T Consensus        86 ~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~  162 (277)
T cd06641          86 GGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV  162 (277)
T ss_pred             CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccchhhhcccc
Confidence                           335678899999999999988   999999999999998876666 3321               


Q ss_pred             ------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                  ...++.++|+||||++++|+++|..|+......  .............    +               
T Consensus       163 ~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~----~---------------  221 (277)
T cd06641         163 GTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM--KVLFLIPKNNPPT----L---------------  221 (277)
T ss_pred             CCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH--HHHHHHhcCCCCC----C---------------
Confidence                        133566899999999999999999998643211  0000000000000    0               


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                               ....+..+.+++..||+.+|+.||++.++++
T Consensus       222 ---------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         222 ---------EGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             ---------CcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                     0133456788999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.89  E-value=2.5e-23  Score=172.29  Aligned_cols=164  Identities=23%  Similarity=0.363  Sum_probs=117.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecC----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFK----------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~----------------------------------------   95 (268)
                      ++|.....||+|+||.||+|+...     +...+++|.+.                                        
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            567778899999999999999742     34678888332                                        


Q ss_pred             -------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee
Q 044875           96 -------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY  143 (268)
Q Consensus        96 -------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~  143 (268)
                                                     +.....++.+++.+++|||+.+   ++|+||||+||+++.+...++ ++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~  161 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL  161 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence                                           1234668899999999999988   999999999999998776655 11


Q ss_pred             c----------------------------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccch
Q 044875          144 G----------------------------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQI  194 (268)
Q Consensus       144 ~----------------------------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~  194 (268)
                      +                            .....+.++|+||||++++|+++ |..||......  ............  
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~~~~~--  237 (275)
T cd05046         162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQAGKLE--  237 (275)
T ss_pred             ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHcCCcC--
Confidence            1                            12335677999999999999998 77788643221  111111100000  


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                       ..        ..                ...+..+.+++.+||+.+|++||++.+++..|+
T Consensus       238 -~~--------~~----------------~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         238 -LP--------VP----------------EGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             -CC--------CC----------------CCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence             00        00                023456888999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.89  E-value=3.2e-23  Score=172.10  Aligned_cols=183  Identities=19%  Similarity=0.271  Sum_probs=119.8

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ...+.||+|++|.||++....+++.+++|.+..                                               
T Consensus         2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~   81 (283)
T cd05118           2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD   81 (283)
T ss_pred             ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC
Confidence            445779999999999999988899999994322                                               


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                      .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.              
T Consensus        82 ~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~  158 (283)
T cd05118          82 TDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHY  158 (283)
T ss_pred             CCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCc
Confidence                            334678899999999999988   999999999999998776666 2221              


Q ss_pred             -------------CC-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh---hCccchhhhcchhhhcCCCc
Q 044875          146 -------------GN-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM---AVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -------------~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~  208 (268)
                                   +. .++.++|+||+|++++++++|+.||....... .+......   ..+.......+....  ...
T Consensus       159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  235 (283)
T cd05118         159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFKIFRTLGTPDPEVWPKFTSLARN--YKF  235 (283)
T ss_pred             cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCchHhcccchhhhhh--hhh
Confidence                         12 46778999999999999999999986432211 01111100   000000110000000  000


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+...... ......+...++.+++..||+.||.+||++++++.
T Consensus       236 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         236 SFPKKAGMP-LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             hhccccccC-HHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            000000000 01111245678899999999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.89  E-value=5.8e-23  Score=169.66  Aligned_cols=128  Identities=23%  Similarity=0.419  Sum_probs=86.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------------------------
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------------------------  146 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------------------------  146 (268)
                      ..++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+                                
T Consensus       102 ~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  178 (268)
T cd05086         102 QRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHG  178 (268)
T ss_pred             HHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccC
Confidence            467789999999999988   999999999999988776666 44321                                


Q ss_pred             ----CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhh
Q 044875          147 ----NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG  221 (268)
Q Consensus       147 ----~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~  221 (268)
                          ..++.++||||||+++||+++ |..||......     ...............++.+..                 
T Consensus       179 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-----------------  236 (268)
T cd05086         179 GLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-----EVLNHVIKDQQVKLFKPQLEL-----------------  236 (268)
T ss_pred             ccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHhhcccccCCCccCC-----------------
Confidence                113567999999999999997 56677542211     111111111111122222211                 


Q ss_pred             chHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          222 QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       222 ~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                         .....+.+++..|| .+|++||++++|+..|.
T Consensus       237 ---~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         237 ---PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             ---CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence               12234677888899 57999999999998774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.89  E-value=1.2e-23  Score=182.16  Aligned_cols=112  Identities=24%  Similarity=0.422  Sum_probs=93.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            367778899999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ |||.+         
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~  157 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS  157 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccccccc
Confidence                                223456789999999999988   999999999999998877665 55531         


Q ss_pred             -------------------------------------------------------------CCcCccccEeechHHHHHH
Q 044875          147 -------------------------------------------------------------NQFSTNGDVYSYGKLLLEI  165 (268)
Q Consensus       147 -------------------------------------------------------------~~~~~~~Dv~s~G~vl~el  165 (268)
                                                                                   ..++.++|||||||++||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  237 (376)
T cd05598         158 KYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM  237 (376)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeeh
Confidence                                                                         2356789999999999999


Q ss_pred             HhCCCCCCcc
Q 044875          166 FTGKRSTSDM  175 (268)
Q Consensus       166 ~tg~~p~~~~  175 (268)
                      ++|+.||...
T Consensus       238 l~G~~Pf~~~  247 (376)
T cd05598         238 LVGQPPFLAD  247 (376)
T ss_pred             hhCCCCCCCC
Confidence            9999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.89  E-value=3.2e-23  Score=172.13  Aligned_cols=182  Identities=15%  Similarity=0.195  Sum_probs=118.1

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ...+.||+|+||.||+|....++..+|+|.+..                                               
T Consensus         2 ~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~   81 (282)
T cd07831           2 KILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFEL   81 (282)
T ss_pred             ceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEec
Confidence            445779999999999999988899999993321                                               


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.||.|||+.+   ++|+||+|+||+++. ...++ +|+.            
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~~  157 (282)
T cd07831          82 MDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYTE  157 (282)
T ss_pred             CCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCCCcCC
Confidence                              345778899999999999988   999999999999998 65555 3221            


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC--ccchhhhcchhhhcCCCc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV--PDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~  208 (268)
                                     +..++.++|+||+|++++|+++|..||....... .+........  +..+............  
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  234 (282)
T cd07831         158 YISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRKSRHMNY--  234 (282)
T ss_pred             CCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcccccccc--
Confidence                           1235678999999999999999999997532211 0111100000  0000000000000000  


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+......+ .......+..+.+++..||+.+|++||+++++++
T Consensus       235 ~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         235 NFPSKKGTGL-RKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cCcccccccH-HHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            0000000000 0001134678999999999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.89  E-value=3e-23  Score=170.19  Aligned_cols=160  Identities=23%  Similarity=0.308  Sum_probs=117.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||.|+||.||++....++..+|+|.+..                                             
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            46677889999999999999987899999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------  144 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------  144 (268)
                                         .....++.++++|+.|||+.+   ++|+||+|+||+++.+...++ +++            
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~  157 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTT  157 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCcccc
Confidence                               335678899999999999988   999999999999998877766 222            


Q ss_pred             --------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          145 --------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       145 --------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    ....++.++|+||+|++++++++|..||.......  ..........  ....        .    
T Consensus       158 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~--~~~~--------~----  221 (258)
T cd05578         158 STSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI--RDQIRAKQET--ADVL--------Y----  221 (258)
T ss_pred             ccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH--HHHHHHHhcc--cccc--------C----
Confidence                          11335789999999999999999999998543211  1111110000  0000        0    


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh--HHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT--SDVV  252 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~--~~v~  252 (268)
                                  +...+..+.+++..||+.||.+||++  +++.
T Consensus       222 ------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         222 ------------PATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             ------------cccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence                        01234568889999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.89  E-value=3.5e-23  Score=172.52  Aligned_cols=160  Identities=20%  Similarity=0.364  Sum_probs=116.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||++....++..+++|.+..                                              
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~  100 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG  100 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence            3444789999999999999887889999994321                                              


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------------  145 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------------  145 (268)
                                    .....++.+++.+++|||+.+   ++||||+|+||+++.+...++ +++.                
T Consensus       101 ~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  177 (285)
T cd06648         101 GALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVG  177 (285)
T ss_pred             CCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccC
Confidence                          234568899999999999988   999999999999998877766 3331                


Q ss_pred             -----------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          146 -----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       146 -----------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                 +..++.++|+||||++++|+++|+.||......  ..........+....        .          
T Consensus       178 ~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~--~~~~~~~~~~~~~~~--------~----------  237 (285)
T cd06648         178 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL--QAMKRIRDNLPPKLK--------N----------  237 (285)
T ss_pred             CccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHhcCCCCCc--------c----------
Confidence                       134678899999999999999999998642111  001111111000000        0          


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                              .......+.+++.+||+.+|++||++.++++
T Consensus       238 --------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         238 --------LHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             --------cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence                    0023456899999999999999999999884

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.89  E-value=1.9e-23  Score=171.10  Aligned_cols=159  Identities=19%  Similarity=0.321  Sum_probs=115.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||+|....++..+|+|.+..                                             
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            46667889999999999999988899999994321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-eee-eec----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-THV-EYG----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-~~i-e~~----------  144 (268)
                                          .....++.+++.|+.|||+.+   ++|+|++|+||+++.+.. .++ +++          
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence                                235677889999999999988   999999999999987643 233 221          


Q ss_pred             -----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          145 -----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       145 -----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                       ....++.++|+||||++++|+++|..|+.....     .............+. .        
T Consensus       158 ~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~-~--------  223 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVLKICQGYFAPI-S--------  223 (257)
T ss_pred             cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhcccCCCC-C--------
Confidence                             123467789999999999999999999864211     111111111111000 0        


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ......+.+++.+||+.+|++|||+.+++.
T Consensus       224 ----------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         224 ----------------PNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             ----------------CCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence                            022345888999999999999999999975

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.89  E-value=2.9e-23  Score=174.14  Aligned_cols=188  Identities=21%  Similarity=0.298  Sum_probs=121.9

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|+..+.||+|+||.||+|....+++.+|+|.+..                                          
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            45788888999999999999999988899999983311                                          


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.+++.||+|||+.+   ++|+||+|+||+++.+...++ +|+
T Consensus        85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl~dfg  161 (302)
T cd07864          85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKLADFG  161 (302)
T ss_pred             cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEeCccc
Confidence                                           234678889999999999988   999999999999998877766 222


Q ss_pred             c-----------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh---hhCcc
Q 044875          145 M-----------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK---MAVPD  192 (268)
Q Consensus       145 ~-----------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~  192 (268)
                      .                             ...++.++||||||++++|+++|+.||...... ..+.....   ...+.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (302)
T cd07864         162 LARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSPCPA  240 (302)
T ss_pred             ccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChh
Confidence            1                             122467899999999999999999998742211 11111111   01111


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+.............  .......... .....+..+.+++..||+.||++||++++++.
T Consensus       241 ~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         241 VWPDVIKLPYFNTMKP--KKQYRRRLRE-EFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hccccccccccccccc--ccccccchhh-hcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111100000000000  0000000000 00122456889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=2.8e-23  Score=179.85  Aligned_cols=111  Identities=22%  Similarity=0.400  Sum_probs=92.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            467778899999999999999988999999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+         
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~  157 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS  157 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence                                223457889999999999988   999999999999988777665 45422         


Q ss_pred             -----------------------------------------------------------------CCcCccccEeechHH
Q 044875          147 -----------------------------------------------------------------NQFSTNGDVYSYGKL  161 (268)
Q Consensus       147 -----------------------------------------------------------------~~~~~~~Dv~s~G~v  161 (268)
                                                                                       ..++.++|+|||||+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi  237 (377)
T cd05629         158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI  237 (377)
T ss_pred             ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence                                                                             235778999999999


Q ss_pred             HHHHHhCCCCCCc
Q 044875          162 LLEIFTGKRSTSD  174 (268)
Q Consensus       162 l~el~tg~~p~~~  174 (268)
                      ++|+++|..||..
T Consensus       238 l~elltG~~Pf~~  250 (377)
T cd05629         238 MFECLIGWPPFCS  250 (377)
T ss_pred             hhhhhcCCCCCCC
Confidence            9999999999975

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.89  E-value=1.6e-23  Score=179.26  Aligned_cols=196  Identities=15%  Similarity=0.290  Sum_probs=128.0

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------   96 (268)
                      ..++...+++|...+.||+|+||.||+|....+++.||+|.+..                                    
T Consensus         9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~   88 (345)
T cd07877           9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA   88 (345)
T ss_pred             HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence            45677788999999999999999999999887899999994421                                    


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.++++|++|||+.+   ++||||||+||+++.+...++ +|+
T Consensus        89 ~~~~~~~~~~lv~~~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~dfg  165 (345)
T cd07877          89 RSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFG  165 (345)
T ss_pred             ccccccccEEEEehhcccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCCCCEEEeccc
Confidence                                           223458889999999999988   999999999999998887776 333


Q ss_pred             cC-------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Cccchhhh
Q 044875          145 MG-------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPDQISEV  197 (268)
Q Consensus       145 ~~-------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~  197 (268)
                      ..                         ..++.++||||||++++|+++|+.||....... .+.......  .+..+...
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~  244 (345)
T cd07877         166 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKK  244 (345)
T ss_pred             ccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHhh
Confidence            21                         235678999999999999999999986432211 111111110  01111111


Q ss_pred             cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +............+..+...+.. ........+.+++..|++.||.+||++.+++.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         245 ISSESARNYIQSLTQMPKMNFAN-VFIGANPLAVDLLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             cccHhHHHHHHHhcccCCcchhh-hcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence            10000000000000000000000 00012446789999999999999999999884

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.89  E-value=3e-23  Score=174.55  Aligned_cols=112  Identities=21%  Similarity=0.407  Sum_probs=92.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|.....||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   91 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK   91 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence            568888999999999999999988899999993311                                            


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+..  
T Consensus        92 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~  168 (310)
T cd07865          92 GSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFGLARA  168 (310)
T ss_pred             ceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCCCccc
Confidence                                       234678889999999999988   999999999999998877766 33211  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                                    ..++.++|+||||++++|+++|..|+...
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~  227 (310)
T cd07865         169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN  227 (310)
T ss_pred             ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence                                          12467899999999999999999998653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.89  E-value=5.2e-23  Score=168.54  Aligned_cols=160  Identities=21%  Similarity=0.364  Sum_probs=117.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||.|+||.||.+....++..+++|.+..                                             
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            46667899999999999999888899999993321                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.++.|||+.+   ++|+||+|+||+++.+...++ +|+.          
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence                                234667889999999999988   999999999999998887766 3321          


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++|+||||++++|+++|..|+......     ..............           
T Consensus       158 ~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-----~~~~~~~~~~~~~~-----------  221 (256)
T cd08221         158 AETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-----NLVVKIVQGNYTPV-----------  221 (256)
T ss_pred             ccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHcCCCCCC-----------
Confidence                             123567899999999999999999998642111     11110000000000           


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                    ......++..++..||+.+|++||++.++++.
T Consensus       222 --------------~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         222 --------------VSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             --------------ccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence                          01334568889999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.89  E-value=4.3e-23  Score=171.63  Aligned_cols=185  Identities=19%  Similarity=0.309  Sum_probs=120.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            3456789999999999999988889999994421                                              


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|++|||+.+   ++|+||+|+||+++.++..++ +++.           
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~  157 (287)
T cd07840          81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSAD  157 (287)
T ss_pred             cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCCccc
Confidence                               234678899999999999988   999999999999998877766 2211           


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC---ccchhhhcchhhhc
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV---PDQISEVLDPLFVA  204 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~  204 (268)
                                        ...++.++||||||++++|+++|+.||....... .+........   ........+.....
T Consensus       158 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07840         158 YTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFE  236 (287)
T ss_pred             ccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhh
Confidence                              1235778999999999999999999987533211 1111111100   00111100000000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...  ........+.......++..+.+++..||+.+|++||+++++++
T Consensus       237 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         237 NLK--PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hcc--ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            000  00000001111111123667899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.89  E-value=5.7e-23  Score=168.84  Aligned_cols=163  Identities=23%  Similarity=0.382  Sum_probs=120.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||++....+++.+++|.+..                                            
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            467778999999999999999988899999994322                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eec------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------  144 (268)
                                        .....++.++++++.|||+ .+   ++|+||+|+||+++.+...++ +|+            
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence                              3356789999999999999 88   999999999999998876666 222            


Q ss_pred             ---------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          145 ---------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       145 ---------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ....++.++|+||||+++||+++|..|+......  ...+............ ++          
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~-~~----------  224 (264)
T cd06623         158 NTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGPPPS-LP----------  224 (264)
T ss_pred             cceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCCCCC-CC----------
Confidence                           1233567899999999999999999998754320  1111111000000000 00          


Q ss_pred             chhhhHHhhhhhchHH-HHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQE-SLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    .. .+..+.+++..||+.+|++||++.++++
T Consensus       225 --------------~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         225 --------------AEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             --------------cccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                          02 4567889999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.89  E-value=5.4e-23  Score=172.30  Aligned_cols=179  Identities=18%  Similarity=0.270  Sum_probs=119.2

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~   81 (298)
T cd07841           2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVF   81 (298)
T ss_pred             ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEE
Confidence            5666789999999999999987899999994321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.++++||.|||+.+   ++|+||+|+||+++.+...++ +|+.          
T Consensus        82 e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  158 (298)
T cd07841          82 EFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK  158 (298)
T ss_pred             cccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc
Confidence                                234678899999999999988   999999999999998877766 2221          


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc--cchhhhc---chh
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP--DQISEVL---DPL  201 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~---d~~  201 (268)
                                        ...++.++|+||||++++|+++|.+|+...... ..+....... .+  .......   +..
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYV  237 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccc
Confidence                              123567899999999999999997777642211 1111111100 00  0000000   000


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ......   ...     ...........+.+++..||+.||++|||+++++.
T Consensus       238 ~~~~~~---~~~-----~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         238 EFKPFP---PTP-----LKQIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             cccccC---Ccc-----hhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            000000   000     00111234567889999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.89  E-value=5.3e-23  Score=169.47  Aligned_cols=160  Identities=18%  Similarity=0.270  Sum_probs=116.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||.|....++..+|+|.+..                                            
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            567888999999999999999988899999994310                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.+|.|||+.+   ++|+||+|+||+++.+...++ ||+..     
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~  158 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKRLQT  158 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccccccc
Confidence                                    234678899999999999988   999999999999998877766 44321     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++|+||||+++||+++|+.|+.......    .......... ...    
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~----~~~~~~~~~~-~~~----  229 (265)
T cd06652         159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMA----AIFKIATQPT-NPV----  229 (265)
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHH----HHHHHhcCCC-CCC----
Confidence                                     235678999999999999999999986431111    1111000000 000    


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                          .+......+..++..||. +|+.||+++++++
T Consensus       230 --------------------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         230 --------------------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             --------------------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence                                001333456677788885 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.89  E-value=3.4e-23  Score=176.42  Aligned_cols=185  Identities=17%  Similarity=0.307  Sum_probs=123.8

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|+..+.||+|+||.||+|....++..+|+|.+..                                           
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   83 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV   83 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence            3678888999999999999999988899999994321                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||+|||+.+   ++||||||+||+++.++..++ +|+..      
T Consensus        84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  160 (334)
T cd07855          84 YVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARGLSSS  160 (334)
T ss_pred             EEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccceeeccc
Confidence                                   235678889999999999988   999999999999998887776 33211      


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc-c-hhhh
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD-Q-ISEV  197 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~-~-~~~~  197 (268)
                                                ..++.++|+||||+++||+++|+.||........ +...... +.+. . ....
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~-~~~~~~~~g~~~~~~~~~~  239 (334)
T cd07855         161 PTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ-LKLILSVLGSPSEEVLNRI  239 (334)
T ss_pred             CcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH-HHHHHHHhCCChhHhhhhh
Confidence                                      2356789999999999999999999975322110 1111110 0000 0 0000


Q ss_pred             cchhhhc---CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDPLFVA---GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+.....   .........     ..........++..++..||+.+|++||+++++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         240 GSDRVRKYIQNLPRKQPVP-----WSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             chhhHHHHHhhcccCCCCC-----HHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0000000   000000000     00011134667899999999999999999999885

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.89  E-value=3.2e-23  Score=178.86  Aligned_cols=116  Identities=24%  Similarity=0.390  Sum_probs=96.3

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------   96 (268)
                      +....++|...+.||+|+||.||++....+++.+|+|.+..                                       
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY  117 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence            33445778888999999999999999988899999994321                                       


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+     
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~  194 (370)
T cd05621         118 LYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE  194 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence                                    234568889999999999988   999999999999998887777 44321     


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                                 ..++.++|+||+|+++||+++|+.||..
T Consensus       195 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~  249 (370)
T cd05621         195 TGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA  249 (370)
T ss_pred             CCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCC
Confidence                                       1156789999999999999999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.89  E-value=6.2e-23  Score=170.99  Aligned_cols=165  Identities=20%  Similarity=0.346  Sum_probs=121.3

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ..+++|.....||+|+||.||+|....++..+++|.+..                                         
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            345677777889999999999999987889999994331                                         


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------  144 (268)
                                          .....++.+++.|++|||+.+   ++|+|++|+||+++.+...++ +++           
T Consensus        96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  172 (286)
T cd06614          96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK  172 (286)
T ss_pred             ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccchhh
Confidence                                234668999999999999988   999999999999998776666 222           


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      .+..++.++|+||||++++|+++|..|+........ .........+    ...+         
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~-~~~~~~~~~~----~~~~---------  238 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA-LFLITTKGIP----PLKN---------  238 (286)
T ss_pred             hccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhcCCC----CCcc---------
Confidence                            123467889999999999999999999864322110 0000000000    0000         


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    .......+.+++.+||+.+|..||++.+++.
T Consensus       239 --------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         239 --------------PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             --------------hhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence                          0123456888999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.89  E-value=5.2e-23  Score=173.39  Aligned_cols=161  Identities=24%  Similarity=0.321  Sum_probs=117.6

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|+..+.||+|+||.||+|....++..+|+|.+..                                             
T Consensus        16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   95 (308)
T cd06634          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (308)
T ss_pred             HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence            35556789999999999999988889999984321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|+.|||+.+   ++|+||+|+||+++.++..++ +|+.           
T Consensus        96 ~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~  172 (308)
T cd06634          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV  172 (308)
T ss_pred             ccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCccccc
Confidence                               234667889999999999988   999999999999998877766 3331           


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                     ...++.++||||||+++||+++|..|+........ .........+...                
T Consensus       173 ~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~----------------  235 (308)
T cd06634         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPALQ----------------  235 (308)
T ss_pred             CCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH-HHHHhhcCCCCcC----------------
Confidence                           12456789999999999999999999865321110 1111110000000                


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                  .......+.+++.+||+.+|++||++.+++..
T Consensus       236 ------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         236 ------------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             ------------cccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence                        01334557889999999999999999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.89  E-value=4e-23  Score=173.53  Aligned_cols=162  Identities=25%  Similarity=0.344  Sum_probs=124.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      -|.|.....||+|.||.|-+|....+++.||+|.++.                                           
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            4788889999999999999999999999999993332                                           


Q ss_pred             ----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           97 ----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        97 ----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                        .+..+++.++..||.|||.++   |+||||||+|+|++++++.|+ 
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCcEEee
Confidence                                              456789999999999999999   999999999999999999999 


Q ss_pred             eeccCC------------------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhH
Q 044875          142 EYGMGN------------------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF  185 (268)
Q Consensus       142 e~~~~~------------------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~  185 (268)
                      |||.+.                                    ..+.+.||||+||.+|-++.|+-||.+...  ..+...
T Consensus       253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~--~~l~~K  330 (576)
T KOG0585|consen  253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE--LELFDK  330 (576)
T ss_pred             ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--HHHHHH
Confidence            444321                                    124678999999999999999999975321  111111


Q ss_pred             hhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          186 VKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       186 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +...          +......                 .+..+.+-.+++..++.||+.|-+..+|..
T Consensus       331 Ivn~----------pL~fP~~-----------------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  331 IVND----------PLEFPEN-----------------PEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             HhcC----------cccCCCc-----------------ccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            1100          0000100                 134566788899999999999999988764

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.89  E-value=3.9e-23  Score=173.96  Aligned_cols=181  Identities=21%  Similarity=0.309  Sum_probs=120.6

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.+|+|.+..                                           
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            4788888999999999999999988889999993311                                           


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--  145 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--  145 (268)
                                                  .....++.++++||.|||+.+   ++|+|+||+||+++.+...++ +|+.  
T Consensus        87 ~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~  163 (311)
T cd07866          87 RGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFGLAR  163 (311)
T ss_pred             CceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCccch
Confidence                                        223568889999999999988   999999999999998776666 2221  


Q ss_pred             -------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          146 -------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       146 -------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                                                           ...++.++||||||++++|+++|++||........ .......
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~~~  242 (311)
T cd07866         164 PYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIFKL  242 (311)
T ss_pred             hccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Confidence                                                 12356789999999999999999999875322111 1111110


Q ss_pred             -hC--ccchh------hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          189 -AV--PDQIS------EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       189 -~~--~~~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       ..  +....      ...+......    .+.....     ........+.+++..|++.||++|||+.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         243 CGTPTEETWPGWRSLPGCEGVHSFTN----YPRTLEE-----RFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             hCCCChhhchhhhhcccccccccCCC----CCccHHH-----HcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence             00  00000      0000000000    0000000     01122356889999999999999999998874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=4.9e-23  Score=174.02  Aligned_cols=161  Identities=22%  Similarity=0.317  Sum_probs=116.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            357777899999999999999987899999993321                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||+|||+.+   ++|+||||+||+++.+...++ +|+.        
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~  157 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP  157 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence                                  234567889999999999988   999999999999998766655 3321        


Q ss_pred             ------------------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          146 ------------------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       146 ------------------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                                                      +..++.++||||||+++|++++|..||.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~  237 (316)
T cd05574         158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR  237 (316)
T ss_pred             cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence                                                            12345689999999999999999999975322


Q ss_pred             cccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC----hHHHHH
Q 044875          178 EGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD----TSDVVN  253 (268)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs----~~~v~~  253 (268)
                      .. .+....            +........                ......+.+++.+||+.||++||+    ++++++
T Consensus       238 ~~-~~~~~~------------~~~~~~~~~----------------~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         238 DE-TFSNIL------------KKEVTFPGS----------------PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HH-HHHHHh------------cCCccCCCc----------------cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            11 011100            000000000                023566899999999999999999    666664

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.89  E-value=3.8e-23  Score=174.24  Aligned_cols=187  Identities=20%  Similarity=0.316  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   85 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL   85 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence            3678888999999999999999988899999994321                                           


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.|++|||+.+   ++|+||+|+||+++.+...++ +|+.        
T Consensus        86 v~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~  162 (309)
T cd07845          86 VMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA  162 (309)
T ss_pred             EEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence                                  234668899999999999988   999999999999998776666 2221        


Q ss_pred             --------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-c-cch-hhhcchhh
Q 044875          146 --------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-P-DQI-SEVLDPLF  202 (268)
Q Consensus       146 --------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~~-~~~~d~~~  202 (268)
                                          ...++.++||||+|+++||+++|+.||....... .+........ + ... ...-+...
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         163 KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhhhcccc
Confidence                                1235788999999999999999999997532211 1111111100 0 000 00000000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ......  ........ ..........+.+++..|++.||++|||+.+++.
T Consensus       242 ~~~~~~--~~~~~~~~-~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         242 VGKFTL--PKQPYNNL-KHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             cccccc--cCCCCCch-HHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000  00000000 0000122456778999999999999999999885

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=7.3e-23  Score=169.65  Aligned_cols=160  Identities=24%  Similarity=0.432  Sum_probs=116.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|+..+.||+|+||.||+|....++..+|+|.+..                                             
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~   81 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM   81 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence            45667889999999999999987899999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.++.|||+.+   ++|+||+|+||+++.+...++ +|+.           
T Consensus        82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~  158 (277)
T cd06917          82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR  158 (277)
T ss_pred             ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc
Confidence                               234668889999999999988   999999999999998776665 2221           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++|+||||+++|++++|..|+........  ........+        +.+...   
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~--~~~~~~~~~--------~~~~~~---  225 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA--MMLIPKSKP--------PRLEDN---  225 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh--hhccccCCC--------CCCCcc---
Confidence                             12357789999999999999999999975321110  000000000        000000   


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      .....+.+++..||+.||++||++.+++.
T Consensus       226 ----------------~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         226 ----------------GYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             ----------------cCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence                            12345788999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.3e-22  Score=173.43  Aligned_cols=159  Identities=23%  Similarity=0.356  Sum_probs=122.4

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||+|+.|....++..||+|..+.                                          
T Consensus        15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~   94 (370)
T KOG0583|consen   15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK   94 (370)
T ss_pred             ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence            34678888999999999999999988889999993111                                          


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC---
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG---  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~---  146 (268)
                                               .....++.|++.|++|||+.+   |+||||||+|+|++.+ .+.|+ |||.+   
T Consensus        95 ~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             EEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence                                     345679999999999999998   9999999999999998 88888 45533   


Q ss_pred             ------------------------CC-c-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhc
Q 044875          147 ------------------------NQ-F-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVL  198 (268)
Q Consensus       147 ------------------------~~-~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~  198 (268)
                                              .. | +.++||||+|+++|-|++|+-||++..     ...........  .++..+
T Consensus       172 ~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----~~~l~~ki~~~~~~~p~~~  246 (370)
T KOG0583|consen  172 PGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----VPNLYRKIRKGEFKIPSYL  246 (370)
T ss_pred             CCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcCCccCCCCc
Confidence                                    22 4 478999999999999999999998621     11111111111  112211


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                      +                           ..++..++..|++.||..|+++.+++
T Consensus       247 ~---------------------------S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  247 L---------------------------SPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             C---------------------------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            0                           34578889999999999999999998

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.89  E-value=2.1e-23  Score=193.93  Aligned_cols=170  Identities=17%  Similarity=0.297  Sum_probs=119.4

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|.....||+|+||.||++....++..+|+|.+..                                         
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            344678888999999999999999988899999983321                                         


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCC----CCeeecCCCCCccccCCCC-------
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSE----KPIVHCDSKPSNILLDNDM-------  137 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~----~~i~h~dlk~~nill~~~~-------  137 (268)
                                                  .....++.+++.||.|||..+.    ..|+||||||+|||++.+.       
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence                                        2346788999999999998431    3499999999999996432       


Q ss_pred             ----------ceee-eeccC----------------------------CCcCccccEeechHHHHHHHhCCCCCCccccc
Q 044875          138 ----------TTHV-EYGMG----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTE  178 (268)
Q Consensus       138 ----------~~~i-e~~~~----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~  178 (268)
                                ..++ ||+.+                            ..++.++|||||||++||+++|..||..... 
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~-  248 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN-  248 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc-
Confidence                      1233 44321                            2367789999999999999999999974221 


Q ss_pred             ccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH--HHHH
Q 044875          179 GLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV--NNLQ  256 (268)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~--~~L~  256 (268)
                         ...........       +.+..                   ...+..+..++..||+.+|.+||++.+++  ..+.
T Consensus       249 ---~~qli~~lk~~-------p~lpi-------------------~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        249 ---FSQLISELKRG-------PDLPI-------------------KGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             ---HHHHHHHHhcC-------CCCCc-------------------CCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence               11111110000       00000                   02234578899999999999999999998  3444


Q ss_pred             H
Q 044875          257 T  257 (268)
Q Consensus       257 ~  257 (268)
                      .
T Consensus       300 ~  300 (1021)
T PTZ00266        300 N  300 (1021)
T ss_pred             h
Confidence            3

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.89  E-value=9.3e-23  Score=168.40  Aligned_cols=169  Identities=22%  Similarity=0.299  Sum_probs=120.9

Q ss_pred             HHHHHhCCCCcCCcc--cCCCcceEEEEEecCCCeEEEEeecCc------------------------------------
Q 044875           55 SLLKATGGFSSANII--GAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~l--G~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------   96 (268)
                      +...-.++|...+.+  |+|+||.||++....++..+|+|.+..                                    
T Consensus         8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv   87 (267)
T PHA03390          8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMVHQLMKDNPNFIKLYYSVTTLKGHVLI   87 (267)
T ss_pred             HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHHHHHhhcCCCEEEEEEEEecCCeeEEE
Confidence            333344566665655  999999999999988899999983321                                    


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eec---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYG---------  144 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~---------  144 (268)
                                           .....++.++++|+.|||+.+   ++|+||+|+||+++.+. ..++ +|+         
T Consensus        88 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~  164 (267)
T PHA03390         88 MDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS  164 (267)
T ss_pred             EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc
Confidence                                 445778999999999999988   99999999999998877 5554 332         


Q ss_pred             --------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          145 --------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       145 --------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    .+..++.++||||||++++|+++|+.||.....+......+..... ... ..             
T Consensus       165 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~-~~-------------  229 (267)
T PHA03390        165 CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQ-KKL-PF-------------  229 (267)
T ss_pred             cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhc-ccC-Cc-------------
Confidence                          2245678899999999999999999999744333222222221110 000 00             


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-hHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-TSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~~v~~  253 (268)
                                  .......+.+++..||+.+|..||+ ++++++
T Consensus       230 ------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        230 ------------IKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             ------------ccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence                        0023445788889999999999996 588763

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.89  E-value=4.4e-23  Score=171.50  Aligned_cols=182  Identities=19%  Similarity=0.302  Sum_probs=117.7

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..+.||.|++|.||+|....++..+|+|.+..                                              
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            4556789999999999999988899999994321                                              


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.||.|||+.+   ++|+|++|+||+++.+...++ +|+.            
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~  157 (283)
T cd07835          81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYT  157 (283)
T ss_pred             CcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccC
Confidence                              234678899999999999988   999999999999988776665 2211            


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cccchh--hh-cchhhhcC
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPDQIS--EV-LDPLFVAG  205 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~--~~-~d~~~~~~  205 (268)
                                      ...++.++|+||||+++||+++|+.||....... .+....... .+....  .. ..+.....
T Consensus       158 ~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd07835         158 HEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDYKPT  236 (283)
T ss_pred             ccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhhhhh
Confidence                            1234678999999999999999999987432211 111111110 010000  00 00000000


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...    ..... ...........+.+++.+||+.||++||+++++++
T Consensus       237 ~~~----~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         237 FPK----WARQD-LSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             ccc----ccccc-hhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000    00000 00001123356889999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=3.3e-23  Score=176.70  Aligned_cols=194  Identities=16%  Similarity=0.261  Sum_probs=125.6

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .+.|.....||+|+||.||+|....++..||+|.+..                                           
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~   83 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND   83 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence            3567888899999999999999988899999994321                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.+     
T Consensus        84 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          84 VYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             EEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence                                    223567889999999999988   999999999999998777666 33211     


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh---hhCccchhhhcch
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK---MAVPDQISEVLDP  200 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~  200 (268)
                                             ..++.++|+||||++++++++|+.||....... .......   ...+.......++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07858         161 KGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVH-QLKLITELLGSPSEEDLGFIRNE  239 (337)
T ss_pred             CcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHH-HHHHHHHHhCCCChHHhhhcCch
Confidence                                   236678999999999999999999987532110 0100110   0011111111111


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                      ....... ......+.... ........++.+++.+||+.+|++|||++++++  .+..+.
T Consensus       240 ~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         240 KARRYIR-SLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             hhhHHHH-hcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            1000000 00000000000 001134566889999999999999999999985  365543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.88  E-value=8.8e-23  Score=167.06  Aligned_cols=159  Identities=28%  Similarity=0.505  Sum_probs=115.6

Q ss_pred             CcCCcccCCCcceEEEEEecCCC----eEEEEeecC--------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQ----TVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~----~~vavK~l~--------------------------------------------   95 (268)
                      ...+.||.|+||.||++.....+    ..+|+|.+.                                            
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            45578999999999999997655    889999332                                            


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                          +.....++.+++.+++|||+.+   ++|+|++|+||+++.+...++ +|+.         
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~  158 (258)
T smart00219       82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY  158 (258)
T ss_pred             ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccccc
Confidence                                2334678889999999999988   999999999999998876655 2221         


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                         ...++.++|+||+|++++|+++ |..|+.....  ..+.+..........           
T Consensus       159 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~-----------  225 (258)
T smart00219      159 YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGYRLPK-----------  225 (258)
T ss_pred             cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCCCC-----------
Confidence                               1335778999999999999998 7788764211  111111111110000           


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                       +...+..+.+++..||..||++|||+.++++.|
T Consensus       226 -----------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      226 -----------------PENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             -----------------CCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence                             012345688899999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.88  E-value=1.1e-22  Score=171.70  Aligned_cols=159  Identities=26%  Similarity=0.377  Sum_probs=115.7

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....++..+++|.+..                                              
T Consensus        23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  102 (313)
T cd06633          23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY  102 (313)
T ss_pred             hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence            4555779999999999999988899999994431                                              


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.++.|||+.+   ++|+||+|+||+++.+...++ +++.            
T Consensus       103 ~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~  179 (313)
T cd06633         103 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVG  179 (313)
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccc
Confidence                              234567889999999999988   999999999999998776666 2221            


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ...++.++||||||+++||+++|..|+........ .........+    ....            
T Consensus       180 ~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~-~~~~~~~~~~----~~~~------------  242 (313)
T cd06633         180 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNDSP----TLQS------------  242 (313)
T ss_pred             cccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHhcCCC----CCCc------------
Confidence                          23466789999999999999999999875321110 0000000000    0000            


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ......+.+++..||+.+|.+||++.+++.
T Consensus       243 ------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         243 ------------NEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             ------------cccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                        022344778899999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=5.2e-23  Score=168.97  Aligned_cols=159  Identities=18%  Similarity=0.224  Sum_probs=114.4

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      ..||+|+||.||+|....+++.+|+|.+..                                                  
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            458999999999999988899999994421                                                  


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------  145 (268)
                                     .....++.+++.||.|||+.+   ++|+||+|+||+++.+...++ +|+.               
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPD  158 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcC
Confidence                           335678899999999999988   999999999999998777666 3332               


Q ss_pred             --------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHh
Q 044875          146 --------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       146 --------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                              +..++.++|+||||++++|+++|..||.......  .......... .....                    
T Consensus       159 y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~--------------------  215 (260)
T cd05611         159 YLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDA--VFDNILSRRI-NWPEE--------------------  215 (260)
T ss_pred             ccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhccc-CCCCc--------------------
Confidence                    1335778999999999999999999996432211  0000000000 00000                    


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          218 IKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                          ....+...+.+++..||+.+|++||++.++.+.|
T Consensus       216 ----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         216 ----VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             ----ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence                0013345688999999999999999876555443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.88  E-value=9.6e-23  Score=169.47  Aligned_cols=183  Identities=17%  Similarity=0.332  Sum_probs=120.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||.|+||.||+|+...++..+|+|.+..                                             
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            46677899999999999999988899999993321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +++.           
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~  157 (284)
T cd07836          81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF  157 (284)
T ss_pred             CccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc
Confidence                               234568899999999999988   999999999999998776666 2211           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh---Cccchhhhcc-hhhhc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA---VPDQISEVLD-PLFVA  204 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~d-~~~~~  204 (268)
                                       ...++.++|+||||++++|+++|..||....... .........   ....+..+.+ +.+..
T Consensus       158 ~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T cd07836         158 SNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKP  236 (284)
T ss_pred             ccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhcc
Confidence                             1234678999999999999999999987532211 111111110   0001111100 00000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...    ...+... ..........+.+++..|++.||++||+++++++
T Consensus       237 ~~~----~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         237 TFP----RYPPQDL-QQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             ccc----CCChHHH-HHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            000    0000000 0111133566889999999999999999999874

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.88  E-value=6e-23  Score=175.10  Aligned_cols=185  Identities=21%  Similarity=0.367  Sum_probs=121.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....++..+|+|.+..                                           
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~   85 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY   85 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence            4667778899999999999999987889999994411                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.||.|||+.+   ++|+||+|+||+++.++..++ +++.         
T Consensus        86 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          86 LVFEYMETDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             EEecccccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhccccccc
Confidence                                 123457899999999999988   999999999999998887777 3321         


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc--c-chhhhc
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP--D-QISEVL  198 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~-~~~~~~  198 (268)
                                              ...++.++|+||||+++||+++|+.||....... ...........  . ....+.
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHH
Confidence                                    1234678999999999999999999986432211 11111111000  0 000000


Q ss_pred             c---hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 D---PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 d---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .   ..+..........    . ......+....+.+++..||+.||++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         242 SPFAATMLDSLPSRPRK----P-LDELLPKASDDALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             hhhHHHhhhhccccccc----c-hhhhccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence            0   0000000000000    0 00011124567889999999999999999999996

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.88  E-value=2.2e-22  Score=165.86  Aligned_cols=163  Identities=18%  Similarity=0.327  Sum_probs=116.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||+|....+++.+|+|.+..                                             
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            46777899999999999999887899999984421                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eecc-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGM-------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~-------  145 (268)
                                            .....++.+++.|+.|||+.+   ++|+||+|+||+++.+. ..++ +|+.       
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~  157 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK  157 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence                                  234678899999999999988   99999999999997654 2333 3321       


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              +..++.++|+||+|++++++++|..|+........  ..............     
T Consensus       158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~-----  230 (268)
T cd06630         158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNH--LALIFKIASATTAP-----  230 (268)
T ss_pred             cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcch--HHHHHHHhccCCCC-----
Confidence                                    13456789999999999999999999864221110  00000000000000     


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                         ..+.....++.+++..||+.+|++||++.++++
T Consensus       231 -------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         231 -------------------SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             -------------------CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence                               001134456788999999999999999999874

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.88  E-value=6.3e-23  Score=177.14  Aligned_cols=119  Identities=23%  Similarity=0.363  Sum_probs=98.8

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------   96 (268)
                      ..++....++|...+.||+|+||.||++....+++.+|+|.+..                                    
T Consensus        35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~  114 (371)
T cd05622          35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  114 (371)
T ss_pred             HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence            44555566889999999999999999999998999999994321                                    


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +||.+  
T Consensus       115 ~~~~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a~~  191 (371)
T cd05622         115 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK  191 (371)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCceeE
Confidence                                       234567889999999999988   999999999999998887776 44421  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                                    ..++.++|+|||||++||+++|+.||..
T Consensus       192 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  249 (371)
T cd05622         192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA  249 (371)
T ss_pred             cCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCC
Confidence                                          1256789999999999999999999975

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.88  E-value=1.1e-22  Score=168.88  Aligned_cols=155  Identities=19%  Similarity=0.273  Sum_probs=113.3

Q ss_pred             cccCCCcceEEEEEecCCCeEEEEeecC----------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGILDPDQTVVSVRDFK----------------------------------------------------   95 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~~~~~~~vavK~l~----------------------------------------------------   95 (268)
                      .||+|+||.||++....+++.+|+|.+.                                                    
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            4899999999999998788999999321                                                    


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                     +.....++.+++.|+.|||+.+   ++|+|+||+||+++.+...++ +|+..             
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence                           1345678899999999999988   999999999999998877666 44321             


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                   ..++.++|+||+|++++|+++|+.||..................        ++.+           
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~-----------  218 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM--------AVEL-----------  218 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc--------CCCC-----------
Confidence                         24678899999999999999999999753221111000000000        0000           


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                               +......+.+++..|++.+|++||     ++.++++
T Consensus       219 ---------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         219 ---------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             ---------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence                     002245678888999999999999     8888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.88  E-value=9.2e-23  Score=169.69  Aligned_cols=182  Identities=15%  Similarity=0.224  Sum_probs=117.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....++..+++|.+..                                              
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   81 (286)
T cd07832           2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM   81 (286)
T ss_pred             ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc
Confidence            5667889999999999999987899999994321                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.+|+|||+.+   ++|+||+|+||+++.+...++ +|+.             
T Consensus        82 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~  158 (286)
T cd07832          82 PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYS  158 (286)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccc
Confidence                             234678899999999999988   999999999999988766655 2221             


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC---ccchhhhcchh--hhc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV---PDQISEVLDPL--FVA  204 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~--~~~  204 (268)
                                      ...++.++||||+|++++|+++|.+|+...... ..+........   +...++..+..  ...
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd07832         159 HQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSLPDYNKI  237 (286)
T ss_pred             cccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCcchhhcc
Confidence                            123477899999999999999997777542211 11111111000   00001000000  000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..........     .....+....+.+++..|++.||++||++++++.
T Consensus       238 ~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         238 TFPESKPIPL-----EEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             cCCCCCcchH-----HHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            0000000000     0001133477899999999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.88  E-value=3.5e-23  Score=178.10  Aligned_cols=112  Identities=21%  Similarity=0.392  Sum_probs=93.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            467778899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.          
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~  157 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT  157 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence                                234568889999999999988   999999999999998877766 5542          


Q ss_pred             ----------------------------------------------------CCCcCccccEeechHHHHHHHhCCCCCC
Q 044875          146 ----------------------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       146 ----------------------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                                                                          +..++.++|+|||||++||+++|+.||.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~  237 (360)
T cd05627         158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC  237 (360)
T ss_pred             ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence                                                                1236778999999999999999999997


Q ss_pred             cc
Q 044875          174 DM  175 (268)
Q Consensus       174 ~~  175 (268)
                      ..
T Consensus       238 ~~  239 (360)
T cd05627         238 SE  239 (360)
T ss_pred             CC
Confidence            53

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.88  E-value=1.2e-22  Score=166.07  Aligned_cols=161  Identities=23%  Similarity=0.387  Sum_probs=117.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....++..+++|.+..                                             
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            35667889999999999999988899999983211                                             


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------  144 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------  144 (268)
                                          .....++.+++.+++|||+.+   ++|+|++|+||+++.+...++ +++           
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence                                234678899999999999988   999999999999998776666 222           


Q ss_pred             ------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          145 ------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       145 ------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                        .....+.++||||||++++++++|..|+........   .............         .
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~---------~  225 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMA---ALYKIGSSGEPPE---------I  225 (260)
T ss_pred             ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH---HHHhccccCCCcC---------C
Confidence                              112256789999999999999999999875431111   0000000000000         0


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      +......+.+++.+|++.||++||++.++++
T Consensus       226 ----------------~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         226 ----------------PEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             ----------------CcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence                            0133556888999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.88  E-value=2.4e-22  Score=164.35  Aligned_cols=159  Identities=23%  Similarity=0.265  Sum_probs=117.8

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||++....+++.+++|.+..                                             
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            46677889999999999999887889999994321                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------  144 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------  144 (268)
                                            .....++.+++.|++|||+.+   ++|+||+|.||+++.+...++ +++         
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence                                  223577889999999999988   999999999999998766665 332         


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      .+..++.++|+||+|++++|+++|+.|+......  .+........   ..+            
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~~~---~~~------------  220 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQRGK---YPP------------  220 (256)
T ss_pred             cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC---CCC------------
Confidence                            2234567899999999999999999998753221  1111111000   000            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ........+..++..||+.+|++||++.++++
T Consensus       221 -------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         221 -------------IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             -------------CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence                         00134456889999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.6e-22  Score=175.90  Aligned_cols=159  Identities=21%  Similarity=0.312  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      +-|.....||.|+.|.|-.|+...+|+.+|||.+                                              
T Consensus        12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl   91 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL   91 (786)
T ss_pred             cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence            4567788999999999999999999999999932                                              


Q ss_pred             ------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           95 ------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        95 ------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                        .+....+++.||..|+.|+|..+   |+||||||+|+|+|.+.+.|+ |||++         
T Consensus        92 Eyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklL  168 (786)
T KOG0588|consen   92 EYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLL  168 (786)
T ss_pred             EecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCCccc
Confidence                              22567889999999999999998   999999999999999988888 66654         


Q ss_pred             -----------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       .+| +.++||||+|||+|.+++|+.||++..-  ..+...++.+.- +++.            
T Consensus       169 eTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi--r~LLlKV~~G~f-~MPs------------  233 (786)
T KOG0588|consen  169 ETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI--RVLLLKVQRGVF-EMPS------------  233 (786)
T ss_pred             cccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH--HHHHHHHHcCcc-cCCC------------
Confidence                             233 5789999999999999999999995211  122222222211 1111            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      +.+.+...++..++..||+.|-|+++|..
T Consensus       234 ----------------~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  234 ----------------NISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             ----------------cCCHHHHHHHHHHhccCccccccHHHHhh
Confidence                            33445677888899999999999999974

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.88  E-value=8.7e-23  Score=173.51  Aligned_cols=190  Identities=17%  Similarity=0.329  Sum_probs=125.0

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      ++...+++|+..+.||.|+||.||++....++..+|+|.+..                                      
T Consensus         4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            445677899999999999999999999988899999994321                                      


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------  144 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------  144 (268)
                                              .....++.+++.||.|||+.+   ++|+|++|+|++++.+...++ +|+       
T Consensus        84 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~  160 (328)
T cd07856          84 DIYFVTELLGTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARIQDP  160 (328)
T ss_pred             cEEEEeehhccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccccCC
Confidence                                    223467889999999999988   999999999999988766655 222       


Q ss_pred             -----------------cC-CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Cccch-hhhcchhh-
Q 044875          145 -----------------MG-NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPDQI-SEVLDPLF-  202 (268)
Q Consensus       145 -----------------~~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~-~~~~d~~~-  202 (268)
                                       .+ ..++.++|+||||++++|+++|+.||........ ........  .++.+ ....+... 
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd07856         161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQ-FSIITDLLGTPPDDVINTICSENTL  239 (328)
T ss_pred             CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhccchhhH
Confidence                             11 3467789999999999999999999975322110 00011000  00000 00000000 


Q ss_pred             --hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 --VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        .............     .........+.+++..||+.+|++||++.+++.
T Consensus       240 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         240 RFVQSLPKREPVPFS-----EKFKNADPSAIDLLEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHHhhccccCCCcHH-----HHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence              0000000000000     000123467889999999999999999999874

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.88  E-value=3.4e-22  Score=170.19  Aligned_cols=111  Identities=23%  Similarity=0.393  Sum_probs=92.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            367778899999999999999988889999994321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ ||+..        
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~  157 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT  157 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence                                 234567889999999999988   999999999999998877766 44321        


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                               ..++.++||||||+++||+++|+.||..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         158 VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence                                     2356789999999999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.88  E-value=1.9e-22  Score=168.77  Aligned_cols=156  Identities=19%  Similarity=0.376  Sum_probs=114.2

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      ..||+|+||.||++....++..+|+|.+..                                                  
T Consensus        26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  105 (292)
T cd06657          26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  105 (292)
T ss_pred             HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence            569999999999999988899999994321                                                  


Q ss_pred             ----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------------
Q 044875           97 ----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------------  145 (268)
Q Consensus        97 ----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------------  145 (268)
                                .....++.+++.+++|||+.+   ++|+|++|+||+++.+...++ +|+.                    
T Consensus       106 ~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  182 (292)
T cd06657         106 DIVTHTRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW  182 (292)
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccc
Confidence                      234678899999999999988   999999999999998876666 3332                    


Q ss_pred             -------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhh
Q 044875          146 -------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENI  218 (268)
Q Consensus       146 -------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  218 (268)
                             ...++.++|+||||++++|+++|..||......  ..........+......                     
T Consensus       183 ~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~---------------------  239 (292)
T cd06657         183 MAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPKLKNL---------------------  239 (292)
T ss_pred             cCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhhCCcccCCc---------------------
Confidence                   123567899999999999999999998642111  11111111111110000                     


Q ss_pred             hhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          219 KKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       219 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                           ......+.+++..||+.||.+||++.+++.
T Consensus       240 -----~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         240 -----HKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             -----ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence                 022345678899999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.88  E-value=9.1e-23  Score=173.69  Aligned_cols=116  Identities=22%  Similarity=0.381  Sum_probs=98.9

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC-------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK-------------------------------------------   95 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-------------------------------------------   95 (268)
                      ..++|.....||+|+||.||.++-.++|..+|+|.+.                                           
T Consensus       139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL  218 (550)
T KOG0605|consen  139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL  218 (550)
T ss_pred             CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence            4578999999999999999999999999999999433                                           


Q ss_pred             ---------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           96 ---------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        96 ---------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                           +......+.+.+.|+.-+|..+   ++||||||.|+|+|..+..|+ |||+        
T Consensus       219 iMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~  295 (550)
T KOG0605|consen  219 IMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKH  295 (550)
T ss_pred             EEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhhhhh
Confidence                                 2456677788889999999999   999999999999999988888 2332        


Q ss_pred             ------------------------------------------------------------------CCCcCccccEeech
Q 044875          146 ------------------------------------------------------------------GNQFSTNGDVYSYG  159 (268)
Q Consensus       146 ------------------------------------------------------------------~~~~~~~~Dv~s~G  159 (268)
                                                                                        +..|+..+|-||+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                                                                              23467889999999


Q ss_pred             HHHHHHHhCCCCCCcccc
Q 044875          160 KLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       160 ~vl~el~tg~~p~~~~~~  177 (268)
                      ||+||++.|.+||....+
T Consensus       376 ~ImyEmLvGyPPF~s~tp  393 (550)
T KOG0605|consen  376 CIMYEMLVGYPPFCSETP  393 (550)
T ss_pred             HHHHHHHhCCCCCCCCCH
Confidence            999999999999986443

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.88  E-value=1.7e-22  Score=164.53  Aligned_cols=160  Identities=24%  Similarity=0.394  Sum_probs=116.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||++....++..+++|.+..                                              
T Consensus         2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~   81 (253)
T cd05122           2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSG   81 (253)
T ss_pred             ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCC
Confidence            5566889999999999999987889999994322                                              


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------------  144 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------------  144 (268)
                                      .....++.+++.++.|||..+   ++|+|++|+||+++.++..++ +++               
T Consensus        82 ~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~  158 (253)
T cd05122          82 GSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMV  158 (253)
T ss_pred             CcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccccccee
Confidence                            234568889999999999988   999999999999998776666 222               


Q ss_pred             -----------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          145 -----------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       145 -----------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                 .+..++.++|+||||++++++++|+.|+......... . .......   ....++             
T Consensus       159 ~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~-~~~~~~~---~~~~~~-------------  220 (253)
T cd05122         159 GTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKAL-F-KIATNGP---PGLRNP-------------  220 (253)
T ss_pred             cCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHH-H-HHHhcCC---CCcCcc-------------
Confidence                       1123567899999999999999999998753211100 0 0000000   000000             


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                ......+.+++..||+.||++|||+.+++.
T Consensus       221 ----------~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         221 ----------EKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             ----------cccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                      012456888999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.88  E-value=2.4e-22  Score=169.61  Aligned_cols=110  Identities=23%  Similarity=0.430  Sum_probs=89.3

Q ss_pred             CCcCCcccCCCcceEEEEEecC--CCeEEEEeecCc--------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDP--DQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~--~~~~vavK~l~~--------------------------------------------   96 (268)
                      |+....||+|+||.||+|....  ++..+|+|.+..                                            
T Consensus         2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   81 (316)
T cd07842           2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYL   81 (316)
T ss_pred             ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEE
Confidence            5667889999999999999987  789999994321                                            


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC----CCceee-eecc
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN----DMTTHV-EYGM  145 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~----~~~~~i-e~~~  145 (268)
                                                .....++.+++.|+.|||+.+   ++||||||+||+++.    ++..++ +|+.
T Consensus        82 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~  158 (316)
T cd07842          82 LFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDLGL  158 (316)
T ss_pred             EEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence                                      123468889999999999988   999999999999998    666655 3332


Q ss_pred             C-------------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          146 G-------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       146 ~-------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                      +                               ..++.++||||||++++|+++|+.||...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         159 ARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             ccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            1                               23567899999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.88  E-value=1.6e-22  Score=169.13  Aligned_cols=184  Identities=17%  Similarity=0.286  Sum_probs=116.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+....||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            467778899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG--------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~--------  146 (268)
                                          .....++.+++.||+|||+.+   ++|+||+|+||+++.+ ...++ +|+..        
T Consensus        82 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~  158 (294)
T PLN00009         82 YLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR  158 (294)
T ss_pred             cccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCCcc
Confidence                                112357789999999999988   9999999999999853 33344 22211        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCc--cchhhhcc-hhh
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVP--DQISEVLD-PLF  202 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~d-~~~  202 (268)
                                          ..++.++||||+|++++++++|+.||....... .+...... ..+  .......+ +..
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (294)
T PLN00009        159 TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEID-ELFKIFRILGTPNEETWPGVTSLPDY  237 (294)
T ss_pred             ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccccccchhh
Confidence                                235678999999999999999999997532211 11111110 000  00000000 000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .....    .... ............++.+++.+|++.+|++||++.++++
T Consensus       238 ~~~~~----~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        238 KSAFP----KWPP-KDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             hhhcc----cCCC-CCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00000    0000 0000000123455788999999999999999999985

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.87  E-value=4.5e-24  Score=170.31  Aligned_cols=160  Identities=25%  Similarity=0.418  Sum_probs=124.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |....+||+|+||+|||+....+|+.+|+|..+.                                              
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGS  114 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGS  114 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCc
Confidence            5566789999999999999999999999994433                                              


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC--------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN--------------  147 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~--------------  147 (268)
                                    .....++++-..||.|||...   =+|||||+.|||++.++.+++ +||.++              
T Consensus       115 iSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIG  191 (502)
T KOG0574|consen  115 ISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIG  191 (502)
T ss_pred             HHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCcccc
Confidence                          345667888899999999977   789999999999999999988 566443              


Q ss_pred             -------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          148 -------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       148 -------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                   .|++++|+||+|+...||..|++||.+..+....+      ..|...++.+.               
T Consensus       192 TPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIPT~PPPTF~---------------  250 (502)
T KOG0574|consen  192 TPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIPTKPPPTFK---------------  250 (502)
T ss_pred             CcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------eccCCCCCCCC---------------
Confidence                         37889999999999999999999998754432211      11111111110               


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                             .+...+.++.+++..|+-..|++|-|+-++++
T Consensus       251 -------KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  251 -------KPEEWSSEFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             -------ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence                   11255677899999999999999999988775

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.87  E-value=3e-22  Score=163.71  Aligned_cols=159  Identities=22%  Similarity=0.325  Sum_probs=117.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||.|+||.||++....++..+++|.+..                                             
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            36667889999999999999987899999994321                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------  144 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------  144 (268)
                                            .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +++         
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence                                  233568889999999999988   999999999999998766655 222         


Q ss_pred             ------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          145 ------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       145 ------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                        ....++.++|+||+|++++++++|+.|+......     .............         .
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~---------~  223 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLL-----ELALKILKGQYPP---------I  223 (258)
T ss_pred             ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHH-----HHHHHHhcCCCCC---------C
Confidence                              2234678899999999999999999998643211     1111110000000         0


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +                ......+.+++..||+.+|++||++.++++
T Consensus       224 ~----------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         224 P----------------SQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             C----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            0                023455788999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.87  E-value=3.7e-22  Score=165.63  Aligned_cols=183  Identities=20%  Similarity=0.322  Sum_probs=118.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+....||+|+||.||+|....+++.+|+|.+..                                              
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            3445779999999999999988899999993321                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +++.             
T Consensus        81 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (282)
T cd07829          81 DMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTH  157 (282)
T ss_pred             CcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCccccCc
Confidence                             234678899999999999988   999999999999998777766 2221             


Q ss_pred             --------------CC-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh---CccchhhhcchhhhcCCC
Q 044875          146 --------------GN-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA---VPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 --------------~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~~  207 (268)
                                    .. .++.++||||||++++|+++|+.||....... .+.......   .........+-.   ...
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~  233 (282)
T cd07829         158 EVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTEESWPGVTKLP---DYK  233 (282)
T ss_pred             cccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcHHHHHhhcccc---ccc
Confidence                          11 56778999999999999999998886532111 011111000   000000000000   000


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...+....... ..........+.+++..||+.||++||++.+++.
T Consensus       234 ~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         234 PTFPKFPPKDL-EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             ccccccCccch-HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            00000000000 0001122556899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.87  E-value=2.3e-22  Score=170.94  Aligned_cols=195  Identities=17%  Similarity=0.298  Sum_probs=124.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|....++..+|+|.+..                                             
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            36667889999999999999987899999983321                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||.|||+.+   ++|+||||.||+++.++..++ +|+.        
T Consensus        81 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~  157 (330)
T cd07834          81 IVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE  157 (330)
T ss_pred             EEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence                                  223558889999999999988   999999999999998876666 2221        


Q ss_pred             ----------------------CC-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc-chhhhcch
Q 044875          146 ----------------------GN-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD-QISEVLDP  200 (268)
Q Consensus       146 ----------------------~~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~-~~~~~~d~  200 (268)
                                            +. .++.++|+||+|++++++++|..||........ ....... +.+. ......+.
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~  236 (330)
T cd07834         158 DEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFITS  236 (330)
T ss_pred             cccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhccc
Confidence                                  12 467789999999999999999999975432111 0000000 0000 00000000


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVKST  261 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~~~  261 (268)
                      .............. .........+....+.+++..||+.+|++||++.++++  +++.+...
T Consensus       237 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~  298 (330)
T cd07834         237 EKARNYLKSLPKKP-KKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP  298 (330)
T ss_pred             cchhhHHhhcccCC-cchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence            00000000000000 00000011124566889999999999999999999996  56665543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=5e-23  Score=178.17  Aligned_cols=157  Identities=23%  Similarity=0.398  Sum_probs=118.7

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEe-----------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVR-----------------------------------------------------   92 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK-----------------------------------------------------   92 (268)
                      ..+||+|+|=+||||....+|..||--                                                     
T Consensus        45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL  124 (632)
T KOG0584|consen   45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL  124 (632)
T ss_pred             hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence            467999999999999998888888732                                                     


Q ss_pred             --------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee----------------
Q 044875           93 --------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV----------------  141 (268)
Q Consensus        93 --------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i----------------  141 (268)
                                    +.+.....+|++||.+||.|||++. +||+|||||..||.++.+ +..||                
T Consensus       125 ~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aks  203 (632)
T KOG0584|consen  125 FTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKS  203 (632)
T ss_pred             ccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecchhHHHHhhccccce
Confidence                          1111345789999999999999986 899999999999999864 45555                


Q ss_pred             -----eeccC----CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhcCCCccch
Q 044875          142 -----EYGMG----NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       142 -----e~~~~----~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~  211 (268)
                           ||...    ..|+..+|||||||.++||+|+..||....+... ++..+..+. |..+..+-||           
T Consensus       204 vIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ-IYKKV~SGiKP~sl~kV~dP-----------  271 (632)
T KOG0584|consen  204 VIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ-IYKKVTSGIKPAALSKVKDP-----------  271 (632)
T ss_pred             eccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH-HHHHHHcCCCHHHhhccCCH-----------
Confidence                 23222    4588999999999999999999999986544332 333333333 3344444444           


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       ++.+++..|+.. ..+|||+.|++.
T Consensus       272 -----------------evr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  272 -----------------EVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             -----------------HHHHHHHHHhcC-chhccCHHHHhh
Confidence                             367788889999 999999999984

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.87  E-value=7.5e-23  Score=174.94  Aligned_cols=186  Identities=17%  Similarity=0.375  Sum_probs=122.4

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|.....||+|+||.||+|....++..+|+|.+..                                          
T Consensus        13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07851          13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF   92 (343)
T ss_pred             ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence            45778888999999999999999988899999995431                                          


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+++.|++|||+.+   ++|+||+|+||+++.+...++ +|+..    
T Consensus        93 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          93 QDVYLVTHLMGADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             ccEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccccccccc
Confidence                                     223457789999999999988   999999999999998777666 33211    


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Cc-cchhhhcc-hhh
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VP-DQISEVLD-PLF  202 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d-~~~  202 (268)
                                           ..++.++||||+|++++|+++|+.||....... .+....... .+ +.+..-+. ...
T Consensus       170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~  248 (343)
T cd07851         170 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELLQKISSESA  248 (343)
T ss_pred             ccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHHhhccchhH
Confidence                                 235678999999999999999999997532211 111111100 00 00000000 000


Q ss_pred             ---hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 ---VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         ......    .....+.. ........+.+++..|++.||++|||+.+|++
T Consensus       249 ~~~~~~~~~----~~~~~~~~-~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         249 RNYIQSLPQ----MPKKDFKE-VFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHHhccc----cCCCCHHH-HhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence               000000    00000000 00122567889999999999999999999874

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.7e-22  Score=168.71  Aligned_cols=111  Identities=23%  Similarity=0.394  Sum_probs=92.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            467778899999999999999988899999994421                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.|++.||+|||+.+   ++||||||+||+++.++..++ ||+..        
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  157 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT  157 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence                                 234567889999999999988   999999999999998877766 44321        


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                               ..++.++|||||||++||+++|+.||..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         158 VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence                                     1245689999999999999999999974

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-23  Score=164.74  Aligned_cols=165  Identities=25%  Similarity=0.380  Sum_probs=116.3

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      .++...||.|+||+|+|-...++|+..|||++..                                              
T Consensus        66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM  145 (361)
T KOG1006|consen   66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM  145 (361)
T ss_pred             HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence            3445679999999999999999999999994432                                              


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .-.-.|......||.||...  .+|+|||+||+|||++..+..|+ +||..        
T Consensus       146 d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA  223 (361)
T KOG1006|consen  146 DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA  223 (361)
T ss_pred             hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHHH
Confidence                                 11112233345799999873  45999999999999999998888 45432        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..|+.+|||||+|+.++|+.||..||......-..+.+.+.    ...+.+..+     .
T Consensus       224 kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~----gdpp~l~~~-----~  294 (361)
T KOG1006|consen  224 KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI----GDPPILLFD-----K  294 (361)
T ss_pred             hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc----CCCCeecCc-----c
Confidence                                23788999999999999999999999864331111111111    111111111     0


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ...+...++.+++..|+-.|-++||...++..
T Consensus       295 ---------------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  295 ---------------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             ---------------cccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence                           00144566888889999999999999988764

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.87  E-value=1.5e-22  Score=173.03  Aligned_cols=190  Identities=15%  Similarity=0.313  Sum_probs=122.9

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||++....++..||+|.+..                                         
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR   91 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence            345788888999999999999999988899999994421                                         


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                                .....++.+++.|+.|||..+   ++||||||+||+++.+...++ +|+..   
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880          92 FHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             cceEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence                                      123457889999999999988   999999999999998877666 44322   


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC--ccchhhhcchhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV--PDQISEVLDPLF  202 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~  202 (268)
                                            ..++.++|+||+|++++++++|..||....... ..........  +..+.+.+...-
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  247 (343)
T cd07880         169 DSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKEFVQKLQSED  247 (343)
T ss_pred             ccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhcchh
Confidence                                  235678999999999999999999987532211 1111111100  001111110000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                      ........+......+ ..........+.+++..|++.||++|||+.+++
T Consensus       248 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l  296 (343)
T cd07880         248 AKNYVKKLPRFRKKDF-RSLLPNANPLAVNVLEKMLVLDAESRITAAEAL  296 (343)
T ss_pred             HHHHHHhccccCcchH-HHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence            0000000000000000 000113344578999999999999999999998

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.87  E-value=3.3e-22  Score=173.57  Aligned_cols=159  Identities=23%  Similarity=0.312  Sum_probs=120.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ++.|.....+|.|+|+.|-.+....+++..++|.++.                                           
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g  400 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDG  400 (612)
T ss_pred             chhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCCceeeeeehhccc
Confidence            4455666779999999999999988999999994433                                           


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc-CCCCceee--------------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL-DNDMTTHV--------------------  141 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill-~~~~~~~i--------------------  141 (268)
                                    ..+..|+.+++.++.|||+++   ++||||||+|||+ +...+.++                    
T Consensus       401 ~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~  477 (612)
T KOG0603|consen  401 GELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTL  477 (612)
T ss_pred             cHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhh
Confidence                          233458899999999999998   9999999999999 46665555                    


Q ss_pred             -----eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHH
Q 044875          142 -----EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE  216 (268)
Q Consensus       142 -----e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  216 (268)
                           |++....|+.++|+||+|+++|+|++|+.|+...... .++......+   ...                     
T Consensus       478 ~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~-~ei~~~i~~~---~~s---------------------  532 (612)
T KOG0603|consen  478 QYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG-IEIHTRIQMP---KFS---------------------  532 (612)
T ss_pred             cccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch-HHHHHhhcCC---ccc---------------------
Confidence                 3334467899999999999999999999999864333 2222221111   111                     


Q ss_pred             hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          217 NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       217 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                             ...+...-++..+|++.||.+||+|.++..
T Consensus       533 -------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  533 -------ECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             -------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence                   134455677888899999999999999864

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.87  E-value=6.1e-22  Score=168.52  Aligned_cols=111  Identities=22%  Similarity=0.388  Sum_probs=92.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            467778899999999999999988899999994321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+        
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  157 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT  157 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence                                 234567789999999999988   999999999999998877766 44321        


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                               ..++.++|+||||+++||+++|+.||..
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         158 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence                                     2356789999999999999999999974

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.87  E-value=2.8e-22  Score=159.46  Aligned_cols=114  Identities=26%  Similarity=0.417  Sum_probs=99.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      ++|.....||.|+||.|...+...++..+|.|                                                
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            46777789999999999999999899999999                                                


Q ss_pred             ----------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           93 ----------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        93 ----------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                      +|++.....++.+|+.|+.|||+.+   |++|||||+|+|+|.++..++ |||.          
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~T  200 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWT  200 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCcEEE
Confidence                            3444667889999999999999998   999999999999999998888 4443          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                    +..|+.++|-||||+++|||+.|.+||.+...
T Consensus       201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~  246 (355)
T KOG0616|consen  201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP  246 (355)
T ss_pred             ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh
Confidence                          35688999999999999999999999986433

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.87  E-value=6.3e-22  Score=162.74  Aligned_cols=155  Identities=23%  Similarity=0.302  Sum_probs=111.5

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||.|+||.||++....++..+++|.+..                                                    
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            6999999999999987789999994321                                                    


Q ss_pred             ------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------------
Q 044875           97 ------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------------  145 (268)
Q Consensus        97 ------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------------  145 (268)
                                  .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+.                  
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~  157 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPE  157 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcC
Confidence                        234567889999999999988   999999999999998877666 2221                  


Q ss_pred             --------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHh
Q 044875          146 --------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       146 --------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                              ...++.++|+||+|+++||+++|..|+.....+............ .          ....           
T Consensus       158 ~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~----------~~~~-----------  215 (262)
T cd05572         158 YVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGN-G----------KLEF-----------  215 (262)
T ss_pred             ccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccC-C----------CCCC-----------
Confidence                    234577899999999999999999999754321111111100000 0          0000           


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          218 IKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                           +......+.+++..||+.+|++||+     ++++.+
T Consensus       216 -----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         216 -----PNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             -----CcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence                 0122456899999999999999999     666654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=7e-23  Score=177.59  Aligned_cols=161  Identities=20%  Similarity=0.365  Sum_probs=120.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEee------------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRD------------------------------------------------   93 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~------------------------------------------------   93 (268)
                      .+.+...||-|+||.|||+....++...|.|.                                                
T Consensus        33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~  112 (1187)
T KOG0579|consen   33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG  112 (1187)
T ss_pred             HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence            34455679999999999999987777777662                                                


Q ss_pred             --------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           94 --------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        94 --------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                    +.+.....++++++.+|.|||+.+   |+|||||+.|||+.-++..++ |||.             
T Consensus       113 GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDs  189 (1187)
T KOG0579|consen  113 GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDS  189 (1187)
T ss_pred             CchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccchhHHhhhcc
Confidence                          222456678999999999999988   999999999999998877766 3332             


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         ..+|+.++||||||+.+.||.-+.+|-.+......     .-.......+.++.|      
T Consensus       190 FIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRV-----llKiaKSePPTLlqP------  258 (1187)
T KOG0579|consen  190 FIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-----LLKIAKSEPPTLLQP------  258 (1187)
T ss_pred             ccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHH-----HHHHhhcCCCcccCc------
Confidence                               25789999999999999999999999875433221     111111122223322      


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       ......+-++...|+..||+.||+++++++
T Consensus       259 -----------------S~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  259 -----------------SHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             -----------------chhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence                             134556778888899999999999999873

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.87  E-value=2.2e-22  Score=170.75  Aligned_cols=161  Identities=19%  Similarity=0.294  Sum_probs=123.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------------   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------------   93 (268)
                      ++|...+.+|+|+||.++..+...++..+++|.                                               
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm   83 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM   83 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence            456666889999999999998888888999992                                               


Q ss_pred             -------------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------
Q 044875           94 -------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------  144 (268)
Q Consensus        94 -------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------  144 (268)
                                         |+++....++.|+..|+.|||+++   ++|||||+.||++..+...++ +||         
T Consensus        84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen   84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence                               222567889999999999999887   999999999999998877776 333         


Q ss_pred             ------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          145 ------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       145 ------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                        .+.+|+.|+|+||+||++||+++-+++|.....     ...+.......    .+|      
T Consensus       161 ~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki~~~~----~~P------  225 (426)
T KOG0589|consen  161 SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKINRGL----YSP------  225 (426)
T ss_pred             hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHHhhcc----CCC------
Confidence                              335789999999999999999999999975221     11111111111    111      


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                     .+.....++..++..|++.+|+.||++.+++.+
T Consensus       226 ---------------lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  226 ---------------LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             ---------------CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence                           111445668889999999999999999999965

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=5.7e-22  Score=161.89  Aligned_cols=159  Identities=23%  Similarity=0.393  Sum_probs=116.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|+..+.||+|+||.||++....+++.+++|.+..                                             
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            35667889999999999999988889999993321                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                        .....++.+++.++.|||+.+   ++|+|++|+||+++.+...++ +++             
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA  157 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence                              334678899999999999988   999999999999998776666 222             


Q ss_pred             --------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          145 --------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       145 --------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                    ....++.++|+||+|++++++++|..|+......    ........ ..... +            
T Consensus       158 ~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~----~~~~~~~~-~~~~~-~------------  219 (254)
T cd06627         158 SVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPM----AALFRIVQ-DDHPP-L------------  219 (254)
T ss_pred             ccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHH----HHHHHHhc-cCCCC-C------------
Confidence                          1123567899999999999999999998643211    11111000 00000 0            


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  +......+..++.+||+.+|++||++.+++.
T Consensus       220 ------------~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         220 ------------PEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             ------------CCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence                        0022345788999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=7.1e-22  Score=162.72  Aligned_cols=160  Identities=17%  Similarity=0.232  Sum_probs=116.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            467888999999999999999988899999994320                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+..     
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  158 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRIQT  158 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccccccc
Confidence                                    233567889999999999988   999999999999998776665 33321     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++|+||||++++|+++|+.||.+..... ...+.........    +   
T Consensus       159 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~----~---  230 (264)
T cd06653         159 ICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIATQPTKPM----L---  230 (264)
T ss_pred             ccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHHcCCCCCC----C---
Confidence                                     234678999999999999999999987532111 1111111000000    0   


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                           +......+.+++..||+ +|..||+..+++.
T Consensus       231 ---------------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         231 ---------------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             ---------------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence                                 01334568889999999 5799999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.86  E-value=4.6e-22  Score=163.37  Aligned_cols=155  Identities=21%  Similarity=0.318  Sum_probs=111.8

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||.|+||.||++....+++.+++|.+..                                                    
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            6899999999999987899999994421                                                    


Q ss_pred             ------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------
Q 044875           97 ------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------  146 (268)
Q Consensus        97 ------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------  146 (268)
                                  .....++.+++.||+|||+.+   ++|+||+|+||+++.+...++ +|+..                 
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  157 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKE  157 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccccc
Confidence                        345678999999999999988   999999999999998877766 33311                 


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ...+.++||||||++++|+++|..||.......  .......... .....           
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~~~-----------  223 (265)
T cd05579         158 DKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE--IFQNILNGKI-EWPED-----------  223 (265)
T ss_pred             ccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHhcCCc-CCCcc-----------
Confidence                              224568999999999999999999997432111  0000000000 00000           


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                     ......+..++..||+.+|++|||+..+.+.|
T Consensus       224 ---------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         224 ---------------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             ---------------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence                           01145678999999999999999995555444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.86  E-value=1.5e-22  Score=165.96  Aligned_cols=196  Identities=18%  Similarity=0.282  Sum_probs=128.2

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec------------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF------------------------------------   94 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l------------------------------------   94 (268)
                      +...|..  ++.|.....+|+|.||.|.+......+..||+|.+                                    
T Consensus        81 ~~~gD~l--~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~  158 (415)
T KOG0671|consen   81 YQVGDIL--TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRD  158 (415)
T ss_pred             EEecccc--ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence            3444443  57788888999999999999999878899999922                                    


Q ss_pred             -------------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee--
Q 044875           95 -------------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV--  141 (268)
Q Consensus        95 -------------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i--  141 (268)
                                                     +-.....++.|++++++|||+.+   ++|-||||+|||+.+....+.  
T Consensus       159 wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~  235 (415)
T KOG0671|consen  159 WFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYN  235 (415)
T ss_pred             hhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEec
Confidence                                           11456788999999999999988   999999999999865322211  


Q ss_pred             -------------------eec------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccc-
Q 044875          142 -------------------EYG------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT-  177 (268)
Q Consensus       142 -------------------e~~------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~-  177 (268)
                                         |||                        ++-..+.++||||+|||+.|+.+|...|..-.+ 
T Consensus       236 ~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~  315 (415)
T KOG0671|consen  236 PKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL  315 (415)
T ss_pred             cCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence                               444                        334568899999999999999999998875321 


Q ss_pred             cccchhhHhhhhCccchhhh------cchhhhcCCC----------ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCC
Q 044875          178 EGLGLHNFVKMAVPDQISEV------LDPLFVAGGE----------EEGEKTAEENIKKGQIQESLITILKIRVVCSIKS  241 (268)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~------~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~  241 (268)
                      +.....+.+-...|..+..-      +...-....+          .+..+..+.-...  ...+..++++++..++..|
T Consensus       316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~--~d~e~~~LfDLl~~mL~fD  393 (415)
T KOG0671|consen  316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ--DDLEHVQLFDLLRRMLEFD  393 (415)
T ss_pred             HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc--CcHHHhHHHHHHHHHHccC
Confidence            11112222222222211111      0000000000          0001111111111  1245666999999999999


Q ss_pred             CCCCCChHHHHH
Q 044875          242 PQERMDTSDVVN  253 (268)
Q Consensus       242 p~~RPs~~~v~~  253 (268)
                      |.+|+|+.|++.
T Consensus       394 P~~RiTl~EAL~  405 (415)
T KOG0671|consen  394 PARRITLREALS  405 (415)
T ss_pred             ccccccHHHHhc
Confidence            999999999874

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.86  E-value=1.7e-21  Score=164.51  Aligned_cols=156  Identities=20%  Similarity=0.297  Sum_probs=93.0

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------------------------------  144 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------------------------------  144 (268)
                      ...++.+++.||+|||+.+   ++|+||||+||+++.++..++ +++                                 
T Consensus       103 ~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  179 (314)
T cd08216         103 IAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEV  179 (314)
T ss_pred             HHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHH
Confidence            4568889999999999988   999999999999988666555 111                                 


Q ss_pred             -cC--CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchh----hhcchhhhcCCCccchhhhHHh
Q 044875          145 -MG--NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS----EVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       145 -~~--~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                       ..  ..++.++|+||||+++||+++|+.||........ ..+......+..+.    ...+..................
T Consensus       180 ~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (314)
T cd08216         180 LQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDS  258 (314)
T ss_pred             hcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCccccccCchhhhcCCcCcccccccccchhhh
Confidence             00  2367789999999999999999999975322211 11111111000000    0000000000000000000001


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          218 IKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                      ...........++.+++..||+.||++|||++++++  ++..+
T Consensus       259 ~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         259 VDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            111112234456888999999999999999999985  55444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.86  E-value=3.6e-22  Score=170.66  Aligned_cols=182  Identities=17%  Similarity=0.315  Sum_probs=116.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus         5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~   84 (342)
T cd07854           5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS   84 (342)
T ss_pred             cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence            678888999999999999999988899999982211                                            


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eecc
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGM  145 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~  145 (268)
                                                   .....++.+++.|+.|||+.+   ++||||||+||+++.+ ...++ +|+.
T Consensus        85 ~~~~~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~kl~dfg~  161 (342)
T cd07854          85 LTELNSVYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLKIGDFGL  161 (342)
T ss_pred             ccccceEEEEeecccccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEEECCccc
Confidence                                         233567789999999999988   9999999999999743 33333 2221


Q ss_pred             -------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc-
Q 044875          146 -------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ-  193 (268)
Q Consensus       146 -------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-  193 (268)
                                                     ...++.++|+||||+++||+++|+.||........ ....... .+.. 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~-~~~~~  239 (342)
T cd07854         162 ARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILES-VPVVR  239 (342)
T ss_pred             ceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-cCCCC
Confidence                                           12356789999999999999999999975322111 1111100 0000 


Q ss_pred             ---hhhh---cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          194 ---ISEV---LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       194 ---~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         ....   ......... .......     .........++.+++..||+.||++|||+.+++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         240 EEDRNELLNVIPSFVRNDG-GEPRRPL-----RDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             hHHhhhhhhhhhhhhhhcc-cccCCCH-----HHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence               0000   000000000 0000000     0000123456788999999999999999999983

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.86  E-value=6.5e-22  Score=164.10  Aligned_cols=154  Identities=21%  Similarity=0.344  Sum_probs=109.3

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|+||+||++....+++.+|+|.+..                                                    
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            6999999999999988899999983321                                                    


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------------  144 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------------  144 (268)
                                    .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+                 
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  157 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGT  157 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCC
Confidence                          234567889999999999988   999999999999998876666 332                 


Q ss_pred             ---------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhH
Q 044875          145 ---------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAE  215 (268)
Q Consensus       145 ---------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  215 (268)
                               .+..++.++|+||+|++++++++|+.||........ ......... .....         .         
T Consensus       158 ~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~-~~~~~---------~---------  217 (277)
T cd05577         158 PGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVE-KEELKRRTL-EMAVE---------Y---------  217 (277)
T ss_pred             CCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccccc-HHHHHhccc-ccccc---------C---------
Confidence                     123456789999999999999999999864322110 000000000 00000         0         


Q ss_pred             HhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHH
Q 044875          216 ENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVV  252 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~  252 (268)
                             +......+.+++..||+.||++||     ++.+++
T Consensus       218 -------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll  252 (277)
T cd05577         218 -------PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR  252 (277)
T ss_pred             -------CccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence                   002244578899999999999999     555565

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.86  E-value=7.9e-22  Score=164.72  Aligned_cols=158  Identities=22%  Similarity=0.243  Sum_probs=115.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            356777899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++|+||+|+||+++.++..++ +|+.          
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~  157 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYT  157 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCC
Confidence                                345668899999999999988   999999999999998877766 3332          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +...+.++|+||||++++++++|..||......  ......... ...++.               
T Consensus       158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~-~~~~~~---------------  219 (290)
T cd05580         158 LCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI--QIYEKILEG-KVRFPS---------------  219 (290)
T ss_pred             CCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcC-CccCCc---------------
Confidence                          233567899999999999999999998643211  011110000 000000               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVV  252 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~  252 (268)
                                   .....+.+++..||+.||.+||     +.++++
T Consensus       220 -------------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         220 -------------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             -------------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence                         1234577889999999999999     666665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.86  E-value=5.3e-22  Score=168.96  Aligned_cols=182  Identities=18%  Similarity=0.337  Sum_probs=117.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCC--CeEEEEeecCc-------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPD--QTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~--~~~vavK~l~~-------------------------------------------   96 (268)
                      +|...+.||+|+||.||++.....  +..+|+|.+..                                           
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            356667899999999999999766  88999994321                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.+     
T Consensus        81 ~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~  157 (332)
T cd07857          81 LYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLARGFSE  157 (332)
T ss_pred             EEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence                                    234568889999999999988   999999999999998877666 33311     


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc--chhh
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD--QISE  196 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~  196 (268)
                                                 ..++.++|+||+|++++++++|..|+....... .+...... +.+.  ....
T Consensus       158 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~  236 (332)
T cd07857         158 NPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD-QLNQILQVLGTPDEETLSR  236 (332)
T ss_pred             ccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH-HHHHHHHHhCCCCHHHHHh
Confidence                                       235678999999999999999999986432111 01111110 0000  0011


Q ss_pred             hcchhh----hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLF----VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..++..    ...........     .. ........+.+++..|++.||.+|||+.+++.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         237 IGSPKAQNYIRSLPNIPKKPF-----ES-IFPNANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             hhhhhHHHHHHhccccCCcch-----Hh-hCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            100000    00000000000     00 00012456889999999999999999999873

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=3.9e-22  Score=178.33  Aligned_cols=71  Identities=25%  Similarity=0.498  Sum_probs=59.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------------------CCcC
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------------------NQFS  150 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------------------~~~~  150 (268)
                      ..++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+                            ..++
T Consensus       270 ~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  346 (501)
T PHA03210        270 RAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYC  346 (501)
T ss_pred             HHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCC
Confidence            458889999999999988   999999999999998877777 44432                            2356


Q ss_pred             ccccEeechHHHHHHHhCCC-CCC
Q 044875          151 TNGDVYSYGKLLLEIFTGKR-STS  173 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~tg~~-p~~  173 (268)
                      .++|||||||++||+++|.. |+.
T Consensus       347 ~~~DiwSlGvil~ell~~~~~p~~  370 (501)
T PHA03210        347 EITDIWSCGLILLDMLSHDFCPIG  370 (501)
T ss_pred             cHHHHHHHHHHHHHHHHCCCCCcc
Confidence            78999999999999999765 443

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.86  E-value=1.3e-21  Score=166.77  Aligned_cols=179  Identities=17%  Similarity=0.272  Sum_probs=116.1

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .+.||+|+||.||+|....+++.+|+|.+..                                                 
T Consensus        14 ~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   93 (335)
T PTZ00024         14 GAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD   93 (335)
T ss_pred             hhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC
Confidence            4679999999999999988899999994310                                                 


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+++.|+.|||+.+   ++|+||+|+||+++.+...++ +|+..    
T Consensus        94 ~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024         94 FINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             cEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEEECCccceeecc
Confidence                                     234568899999999999988   999999999999998776665 22211    


Q ss_pred             --------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-
Q 044875          147 --------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-  187 (268)
Q Consensus       147 --------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-  187 (268)
                                                            ..++.++|+||+|++++|+++|..|+........ +..... 
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~i~~~  249 (335)
T PTZ00024        171 YPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ-LGRIFEL  249 (335)
T ss_pred             cccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHH
Confidence                                                  1246789999999999999999999875332111 111111 


Q ss_pred             --hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          188 --MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       188 --~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ......++...+...........+...     ..........+.+++..||+.+|++|||+++++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        250 LGTPNEDNWPQAKKLPLYTEFTPRKPKDL-----KTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             hCCCchhhCcchhhcccccccCcCCcccH-----HHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence              000000110000000000000000000     0001123456888999999999999999999985

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=3e-22  Score=185.11  Aligned_cols=162  Identities=28%  Similarity=0.387  Sum_probs=120.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      +-++.-...+|.|.||.||-|.+.++|+..|+|...-                                           
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            4456677889999999999999999999999992111                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN--------  147 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~--------  147 (268)
                                          .....+..|++.|++|||.++   |+|||+||.||+++.++..|. |||.+.        
T Consensus      1314 EyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~ 1390 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQT 1390 (1509)
T ss_pred             HHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchhc
Confidence                                223456678999999999999   999999999999998887666 555431        


Q ss_pred             --------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          148 --------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       148 --------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                                .-.-+.||||+|||+.||+||++||.....+-. +...+..+-.+++++-    
T Consensus      1391 ~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a-IMy~V~~gh~Pq~P~~---- 1465 (1509)
T KOG4645|consen 1391 MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA-IMYHVAAGHKPQIPER---- 1465 (1509)
T ss_pred             CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-HHhHHhccCCCCCchh----
Confidence                                      123468999999999999999999987655533 2222223323333332    


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                              ...+-.+++..|++.||..|.++.++++
T Consensus      1466 ------------------------ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1466 ------------------------LSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             ------------------------hhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence                                    2233456777899999999988877664

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.85  E-value=2.2e-21  Score=159.27  Aligned_cols=121  Identities=20%  Similarity=0.318  Sum_probs=84.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------------------------CCCcC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------------------------GNQFS  150 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------------------------~~~~~  150 (268)
                      ...++.+++.|+.|||+.+   ++|+|++|+|++++.+. .++ +++.                           ...++
T Consensus       108 ~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~~~-~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  183 (260)
T cd08222         108 VCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKNNL-LKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYD  183 (260)
T ss_pred             HHHHHHHHHHHHHHHHHcC---ccccCCChhheEeecCC-EeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCC
Confidence            4567889999999999988   99999999999998643 232 3321                           12356


Q ss_pred             ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITI  230 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
                      .++|+||||+++|++++|..|+.....     ...........     .+..                    +.....++
T Consensus       184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~~~--------------------~~~~~~~~  233 (260)
T cd08222         184 SKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVEGP-----TPSL--------------------PETYSRQL  233 (260)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHcCC-----CCCC--------------------cchhcHHH
Confidence            689999999999999999999864211     11111000000     0000                    01445568


Q ss_pred             HHHHHHcCCCCCCCCCChHHHHH
Q 044875          231 LKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       231 ~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+++.+||+.+|++||++.++++
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         234 NSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhh
Confidence            88999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.85  E-value=1.8e-21  Score=162.32  Aligned_cols=165  Identities=18%  Similarity=0.232  Sum_probs=114.1

Q ss_pred             CCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-------------------------------------------   96 (268)
                      |...+.||+|+||.||++...   .++..+|+|.+..                                           
T Consensus         2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~   81 (288)
T cd05583           2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH   81 (288)
T ss_pred             ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence            556678999999999999863   3567899984321                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++++|.|||+.+   ++|+||+|+||+++.+...++ +|+..      
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  158 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAE  158 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccccccc
Confidence                                   234557789999999999988   999999999999998776655 33311      


Q ss_pred             ----------------------C--CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ----------------------N--QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ----------------------~--~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                            .  ..+.++|+||||++++|+++|..||....... ............      ++. 
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~~~------~~~-  230 (288)
T cd05583         159 EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEISRRILKS------KPP-  230 (288)
T ss_pred             cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHHHHHHHcc------CCC-
Confidence                                  1  14668999999999999999999986321110 011111100000      000 


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                         .+......+.+++..||+.||+.|||++++...|+-
T Consensus       231 -------------------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         231 -------------------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             -------------------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence                               001223457788999999999999999888766543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.85  E-value=6.2e-22  Score=156.13  Aligned_cols=164  Identities=20%  Similarity=0.300  Sum_probs=124.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .+.|...+.||.|..++|-+.....++...|+|.+.                                            
T Consensus        16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            355677789999999999999998889999988322                                            


Q ss_pred             --------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           96 --------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        96 --------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                +....++++++.+|+.|||..+   |+||||||+|||++.+.+.++ |||.+  
T Consensus        96 sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa~~  172 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFACQ  172 (411)
T ss_pred             chhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEeccceeec
Confidence                                      2456789999999999999988   999999999999999999888 55543  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                    ..|+..+|.||.|+++|.++.|++||.....  .....++..+..     
T Consensus       173 l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ--mlMLR~ImeGky-----  245 (411)
T KOG0599|consen  173 LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ--MLMLRMIMEGKY-----  245 (411)
T ss_pred             cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH--HHHHHHHHhccc-----
Confidence                                          3478899999999999999999999974211  111111111111     


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                ....+.+.          +.....-+++..|++.||..|-|.+|.++
T Consensus       246 ----------qF~speWa----------dis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  246 ----------QFRSPEWA----------DISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ----------ccCCcchh----------hccccHHHHHHHHHeeCchhcccHHHHhc
Confidence                      11111111          44556778899999999999999999884

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.85  E-value=2.8e-21  Score=160.10  Aligned_cols=159  Identities=24%  Similarity=0.388  Sum_probs=117.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            367777889999999999999988899999994421                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +|+.         
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~  157 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS  157 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence                                 345778899999999999988   999999999999988766655 2221         


Q ss_pred             --------------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh
Q 044875          146 --------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK  187 (268)
Q Consensus       146 --------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~  187 (268)
                                                            ...++.++|+||+|++++++++|..|+...... ..+.....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~  236 (280)
T cd05581         158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILK  236 (280)
T ss_pred             cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHh
Confidence                                                  123466899999999999999999998753211 00000000


Q ss_pred             hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh----HHHHH
Q 044875          188 MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT----SDVVN  253 (268)
Q Consensus       188 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~----~~v~~  253 (268)
                      .  ....+                            ......+..++..||+.+|++||++    +++++
T Consensus       237 ~--~~~~~----------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         237 L--EYSFP----------------------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             c--CCCCC----------------------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            0  00000                            1224568899999999999999999    77653

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.84  E-value=1.3e-21  Score=148.39  Aligned_cols=133  Identities=26%  Similarity=0.379  Sum_probs=104.4

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++...+.......||+|+||.|-+-++..+|+..|+|+...                                       
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv  120 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV  120 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence            33333444455679999999999999988999999993322                                       


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 ...-+|+..|..||.|||+  +..++|||+||+|||++.++..|+ |||.+  
T Consensus       121 wIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~  198 (282)
T KOG0984|consen  121 WICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGY  198 (282)
T ss_pred             EEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEccccccee
Confidence                                       3346789999999999999  456999999999999999999998 45433  


Q ss_pred             ----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          147 ----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       147 ----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                                                  ..|+.++||||+|+.+.|+.+++.||+.....-..+.+.+....
T Consensus       199 L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~  270 (282)
T KOG0984|consen  199 LVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPS  270 (282)
T ss_pred             ehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCC
Confidence                                        25888999999999999999999999976555444444444433

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.83  E-value=7.6e-21  Score=154.25  Aligned_cols=141  Identities=21%  Similarity=0.179  Sum_probs=104.2

Q ss_pred             CCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------------
Q 044875           72 GSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------------   96 (268)
Q Consensus        72 G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------------   96 (268)
                      |.||.||++....+++.+|+|.+..                                                       
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~   83 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSEYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIP   83 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhhhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCC
Confidence            8999999999998999999994322                                                       


Q ss_pred             -cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec------------------------cCCCcC
Q 044875           97 -CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG------------------------MGNQFS  150 (268)
Q Consensus        97 -~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~------------------------~~~~~~  150 (268)
                       .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ +|+                        ....++
T Consensus        84 ~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  160 (237)
T cd05576          84 EECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMYCAPEVGGISEET  160 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccccCCcccCCCCCC
Confidence             334678889999999999988   999999999999998876665 332                        123467


Q ss_pred             ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITI  230 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
                      .++|+||+|++++|+++|+.|+.........       .....++                            ......+
T Consensus       161 ~~~DvwslG~il~el~~g~~~~~~~~~~~~~-------~~~~~~~----------------------------~~~~~~~  205 (237)
T cd05576         161 EACDWWSLGAILFELLTGKTLVECHPSGINT-------HTTLNIP----------------------------EWVSEEA  205 (237)
T ss_pred             chhhHHHHHHHHHHHHHCcchhhcCchhccc-------ccccCCc----------------------------ccCCHHH
Confidence            7899999999999999999876532111000       0000000                            0223457


Q ss_pred             HHHHHHcCCCCCCCCCChHH
Q 044875          231 LKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       231 ~~l~~~C~~~~p~~RPs~~~  250 (268)
                      .+++.+|++.||++||++.+
T Consensus       206 ~~li~~~l~~dp~~R~~~~~  225 (237)
T cd05576         206 RSLLQQLLQFNPTERLGAGV  225 (237)
T ss_pred             HHHHHHHccCCHHHhcCCCc
Confidence            78899999999999999743

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.83  E-value=1.3e-20  Score=157.33  Aligned_cols=162  Identities=22%  Similarity=0.284  Sum_probs=112.2

Q ss_pred             CCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~------------------------------------------   96 (268)
                      +|+..+.||.|+||.||.+...   .++..+|+|.+..                                          
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            3566788999999999999873   3688899994431                                          


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.|+.|||+.+   ++||||+|+||+++.+...++ +|+..     
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~  157 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFHE  157 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence                                    233556679999999999988   999999999999998887776 44321     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++||||||++++++++|..|+...... ..............      +.
T Consensus       158 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~------~~  230 (290)
T cd05613         158 DEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK-NSQAEISRRILKSE------PP  230 (290)
T ss_pred             ccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc-ccHHHHHHHhhccC------CC
Confidence                                     12456899999999999999999998632111 11111111110000      00


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                          ..                ......+..++..||+.||++||     +..++..
T Consensus       231 ----~~----------------~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         231 ----YP----------------QEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             ----CC----------------ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence                00                02234578899999999999997     5566553

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.6e-20  Score=153.13  Aligned_cols=148  Identities=26%  Similarity=0.332  Sum_probs=108.1

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||.|+||.||++....+++.+++|.+..                                                    
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            6999999999999987889999983321                                                    


Q ss_pred             ------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------------
Q 044875           97 ------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------------  145 (268)
Q Consensus        97 ------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------------  145 (268)
                                  .....++.+++.|+.|||+.+   ++|+|++|+||+++.+...++ +++.                  
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTP  157 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCc
Confidence                        345678889999999999988   999999999999998876655 2221                  


Q ss_pred             ---------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHH
Q 044875          146 ---------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEE  216 (268)
Q Consensus       146 ---------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~  216 (268)
                               ....+.++|+||||++++|+++|..||.....  ......... ....++                     
T Consensus       158 ~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~~---------------------  213 (250)
T cd05123         158 EYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK-DPLRFP---------------------  213 (250)
T ss_pred             cccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc-CCCCCC---------------------
Confidence                     12345689999999999999999999964321  111011000 000000                     


Q ss_pred             hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHH
Q 044875          217 NIKKGQIQESLITILKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       217 ~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~  250 (268)
                             ...+..+.+++..||..||+.||++++
T Consensus       214 -------~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         214 -------EFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             -------CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence                   022455788999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.83  E-value=2.5e-21  Score=160.26  Aligned_cols=158  Identities=21%  Similarity=0.338  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      .+|.+.+.||.|.||.|-++.....|..||||                                                
T Consensus        53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM  132 (668)
T KOG0611|consen   53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM  132 (668)
T ss_pred             hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence            45677788999999999999987799999999                                                


Q ss_pred             ----------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC--------
Q 044875           93 ----------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN--------  147 (268)
Q Consensus        93 ----------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~--------  147 (268)
                                      .+++.....+++||..++.|+|.+.   ++|||||.+|||+|.+.+.++ |||+++        
T Consensus       133 EYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfL  209 (668)
T KOG0611|consen  133 EYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFL  209 (668)
T ss_pred             EecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhccccHH
Confidence                            2233556789999999999999988   999999999999999999999 666542        


Q ss_pred             ------------------Cc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          148 ------------------QF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       148 ------------------~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        +| +..+|.||+|+++|-++.|.-||++.+...  +...+..+...   +   |        
T Consensus       210 qTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~--lvrQIs~GaYr---E---P--------  273 (668)
T KOG0611|consen  210 QTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKR--LVRQISRGAYR---E---P--------  273 (668)
T ss_pred             HHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHH--HHHHhhccccc---C---C--------
Confidence                              22 467999999999999999999999743321  11111111110   0   0        


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      +.+-...-++.|++..||++|.|..+|..
T Consensus       274 ----------------~~PSdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  274 ----------------ETPSDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             ----------------CCCchHHHHHHHHHhcCcccchhHHHHhh
Confidence                            11223456778899999999999999875

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.83  E-value=2.4e-20  Score=159.62  Aligned_cols=164  Identities=18%  Similarity=0.256  Sum_probs=122.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEee----------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD----------------------------------------------   93 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~----------------------------------------------   93 (268)
                      ...|...+.||+|.||.||+++...+|+.+|+|.                                              
T Consensus        34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l  113 (382)
T KOG0032|consen   34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL  113 (382)
T ss_pred             cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence            3566777899999999999999998899999992                                              


Q ss_pred             ------------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc----eee-eeccC----
Q 044875           94 ------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT----THV-EYGMG----  146 (268)
Q Consensus        94 ------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~----~~i-e~~~~----  146 (268)
                                        +++.....++.+++.++.|||+.+   ++|||+||+|+|+.....    .++ |||++    
T Consensus       114 vmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  114 VMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             EEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc
Confidence                              333456778999999999999988   999999999999976532    222 44433    


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                            ..|+..+||||.|+++|.|++|.+||..........  .+..+...    +-++.   
T Consensus       191 ~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~--~i~~~~~~----f~~~~---  261 (382)
T KOG0032|consen  191 PGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL--AILRGDFD----FTSEP---  261 (382)
T ss_pred             CCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH--HHHcCCCC----CCCCC---
Confidence                                  568899999999999999999999998643322211  11111111    00110   


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        -.......-+++..++..||..|+|+.++++
T Consensus       262 ------------------w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  262 ------------------WDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             ------------------ccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence                              0133555777888899999999999999986

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.82  E-value=5.3e-21  Score=147.35  Aligned_cols=198  Identities=19%  Similarity=0.282  Sum_probs=135.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+++|+|.|+.||.|..-.+++.+.||.+++                                            
T Consensus        38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v  117 (338)
T KOG0668|consen   38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYV  117 (338)
T ss_pred             chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhh
Confidence            566777889999999999999888889999996655                                            


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce--eeeeccC--------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT--HVEYGMG--------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~--~ie~~~~--------------  146 (268)
                                    -.......++..||.|+|+.+   |.|||+||.|++++.....  .+++|++              
T Consensus       118 ~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVA  194 (338)
T KOG0668|consen  118 NNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVA  194 (338)
T ss_pred             ccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeee
Confidence                          234567788999999999999   9999999999999864322  2233332              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhh-------cchhhhcCC
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEV-------LDPLFVAGG  206 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~~~~~  206 (268)
                                   ..|+..-|+|||||++..|+..+.||.....+...+...+.......+...       +||...+-.
T Consensus       195 SRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~  274 (338)
T KOG0668|consen  195 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL  274 (338)
T ss_pred             hhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHh
Confidence                         346788999999999999999999998766665556666555444433222       334332211


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVKST  261 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~~~  261 (268)
                      .....+..+.-...+...-...+.+++....+..|-.+|||++|.+.  ....++++
T Consensus       275 ~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~  331 (338)
T KOG0668|consen  275 GRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA  331 (338)
T ss_pred             hccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence            11111222222222211122356777888888999999999999873  44444443

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=3.6e-20  Score=146.33  Aligned_cols=110  Identities=22%  Similarity=0.406  Sum_probs=94.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +.+..+-||.|+||.||..+.+.+|+.||.|.++.                                             
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiY  133 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELY  133 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHH
Confidence            34567889999999999999999999999995543                                             


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            ....-+..||.+||.|||+.+   |.||||||.|.|++++...|+ |||+.       
T Consensus       134 V~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~  210 (449)
T KOG0664|consen  134 VLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD  210 (449)
T ss_pred             HHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccchhh
Confidence                                  345668889999999999988   999999999999999988888 55543       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                            ..|+.++||||.||++.|++-++-.|..
T Consensus       211 ~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  211 RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence                                  4589999999999999999977766653

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.82  E-value=6.3e-22  Score=153.81  Aligned_cols=163  Identities=19%  Similarity=0.249  Sum_probs=115.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|+..+.||+|.|+.||+....++|+.+|+|.++.                                            
T Consensus        11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe   90 (355)
T KOG0033|consen   11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFD   90 (355)
T ss_pred             hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEe
Confidence            556667889999999999999988999888872211                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce---ee-------------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT---HV-------------  141 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~---~i-------------  141 (268)
                                         ...-....|+.+++.|+|+++   |+|||+||.|+++.+..+.   |+             
T Consensus        91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~  167 (355)
T KOG0033|consen   91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE  167 (355)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEeCCcc
Confidence                               123345678999999999999   9999999999999754322   11             


Q ss_pred             --------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          142 --------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       142 --------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                    |.....+|+..+|||+.|++++-++.|+.||.+..  ...+.+.+..+..+-..+.+|        
T Consensus       168 ~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~~g~yd~~~~~w~--------  237 (355)
T KOG0033|consen  168 AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIKAGAYDYPSPEWD--------  237 (355)
T ss_pred             ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHhccccCCCCcccC--------
Confidence                          12222568999999999999999999999998622  222333333222211110111        


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       ...++.-+++.+++..||.+|-|+.|.++
T Consensus       238 -----------------~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  238 -----------------TVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             -----------------cCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence                             22344567777899999999999998873

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.82  E-value=5.9e-20  Score=142.14  Aligned_cols=135  Identities=19%  Similarity=0.258  Sum_probs=95.4

Q ss_pred             cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeec----------------------cCCCcCc
Q 044875           94 FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYG----------------------MGNQFST  151 (268)
Q Consensus        94 l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~----------------------~~~~~~~  151 (268)
                      +++.....++.|++.||.|||+.+         ||+||+++.++..++ ||                      .+..++.
T Consensus        14 l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~-fG~~~~~~~~~~~g~~~y~aPE~~~~~~~~~   83 (176)
T smart00750       14 LNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL-DGSVAFKTPEQSRVDPYFMAPEVIQGQSYTE   83 (176)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee-ccceEeeccccCCCcccccChHHhcCCCCcc
Confidence            567788999999999999999864         999999998877666 33                      2345788


Q ss_pred             cccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH--HH
Q 044875          152 NGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL--IT  229 (268)
Q Consensus       152 ~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  229 (268)
                      ++|||||||++||+++|+.||.........+........+......        .               ......  ..
T Consensus        84 ~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---------------~~~~~~~~~~  140 (176)
T smart00750       84 KADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR--------S---------------NLESVSAARS  140 (176)
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccc--------c---------------cHHHHHhhhh
Confidence            9999999999999999999986532222222222111111000000        0               000112  35


Q ss_pred             HHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          230 ILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       230 ~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      +.+++..||+.||++||++.++++.+..+..+
T Consensus       141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      141 FADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             HHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence            89999999999999999999999988877654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.82  E-value=2e-20  Score=164.21  Aligned_cols=110  Identities=29%  Similarity=0.506  Sum_probs=89.5

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      +.-.+.||+|+||.||+|++..+|..||||.+..                                              
T Consensus        15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl   94 (732)
T KOG4250|consen   15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL   94 (732)
T ss_pred             eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence            4445779999999999999999999999994432                                              


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee----eeccC
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV----EYGMG  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i----e~~~~  146 (268)
                                               ...+.+..+++.||.|||+++   |+||||||.||++-... ...+    |||.+
T Consensus        95 vmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~A  171 (732)
T KOG4250|consen   95 VMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGAA  171 (732)
T ss_pred             EEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeeccccc
Confidence                                     346788899999999999988   99999999999985332 2222    44432


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                                 ..|+.-+|-|||||++||++||..||-..
T Consensus       172 rel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~  227 (732)
T KOG4250|consen  172 RELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPF  227 (732)
T ss_pred             ccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcC
Confidence                                       46788899999999999999999999743

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.82  E-value=3.6e-20  Score=137.95  Aligned_cols=109  Identities=24%  Similarity=0.508  Sum_probs=90.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecC-----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK-----------------------------------------------   95 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-----------------------------------------------   95 (268)
                      |..-++||+|.||+||||++.++++.||+|...                                               
T Consensus         4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~c   83 (292)
T KOG0662|consen    4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC   83 (292)
T ss_pred             hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHh
Confidence            334467999999999999999999999999321                                               


Q ss_pred             ----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           96 ----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        96 ----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                      .+...+++.|+.+|+.|+|+++   +.|||+||.|.|++.++..++ +||++            
T Consensus        84 dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipvrcysa  160 (292)
T KOG0662|consen   84 DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSA  160 (292)
T ss_pred             hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCceEeeec
Confidence                            1345678889999999999998   999999999999999998888 44433            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSD  174 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~  174 (268)
                                      .-|++..|+||-||++.|+.. |++.|++
T Consensus       161 evvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg  205 (292)
T KOG0662|consen  161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG  205 (292)
T ss_pred             eeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence                            237889999999999999988 6666664

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.9e-20  Score=159.14  Aligned_cols=165  Identities=18%  Similarity=0.263  Sum_probs=123.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +-|..++.||+|.|..|-.++..-+|+.||||.++.                                            
T Consensus        18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE   97 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE   97 (864)
T ss_pred             eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence            557777889999999999999888999999994433                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccCCC------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMGNQ------  148 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~~~------  148 (268)
                                          ....+++.||..++.|+|..+   ++||||||+|+++-+. +..|+ +||+++.      
T Consensus        98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k  174 (864)
T KOG4717|consen   98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK  174 (864)
T ss_pred             ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence                                345678899999999999988   9999999999987543 22333 5665543      


Q ss_pred             --------------------cC-ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          149 --------------------FS-TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       149 --------------------~~-~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                          |+ +++||||+|+++|-+++|++||........ +...+...+.                
T Consensus       175 L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-LTmImDCKYt----------------  237 (864)
T KOG4717|consen  175 LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-LTMIMDCKYT----------------  237 (864)
T ss_pred             hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-hhhhhccccc----------------
Confidence                                22 579999999999999999999986433221 1111111110                


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                                    .+.-...++.+++..++..||.+|.|.++|+.  +|+...
T Consensus       238 --------------vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D  277 (864)
T KOG4717|consen  238 --------------VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD  277 (864)
T ss_pred             --------------CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence                          11255677899999999999999999999984  665543

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.82  E-value=2.7e-21  Score=150.98  Aligned_cols=182  Identities=19%  Similarity=0.284  Sum_probs=122.8

Q ss_pred             cCCcccCCCcceEEEEEecCCCeEEEEe----------------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQTVVSVR----------------------------------------------------   92 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK----------------------------------------------------   92 (268)
                      ...++|+|.||.||+++..+.++.||+|                                                    
T Consensus        21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y  100 (376)
T KOG0669|consen   21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY  100 (376)
T ss_pred             HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence            3467999999999999999999999988                                                    


Q ss_pred             -------------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           93 -------------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        93 -------------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                         +|...+..++.+++..||.|+|.+.   ++|||+|+.|+|++.++..++ |||..      
T Consensus       101 lVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGlar~fs~~  177 (376)
T KOG0669|consen  101 LVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLARAFSTS  177 (376)
T ss_pred             eeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccccceecc
Confidence                               2222456778899999999999988   999999999999999888877 56544      


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCccchhhhc
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPDQISEVL  198 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~  198 (268)
                                                ..|+++.|+|.-||++.||.+|.+-+.+......  .+........++.+++..
T Consensus       178 ~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d  257 (376)
T KOG0669|consen  178 KNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVD  257 (376)
T ss_pred             cccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcc
Confidence                                      3478899999999999999999877765333211  112222222333333332


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHH------HHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESL------ITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...+-...+.+  +.+...++..  .+-.      .+.++++...+..||.+|+.+.++++
T Consensus       258 ~lpL~~sie~e--Pl~~~~~rkv--~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  258 NLPLYQSIELE--PLPKGQKRKV--KNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             cchHHHhccCC--CCCcchhhhh--hhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence            22222111110  0111100000  0111      24567778899999999999999874

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.80  E-value=7.2e-20  Score=146.12  Aligned_cols=167  Identities=18%  Similarity=0.302  Sum_probs=120.6

Q ss_pred             HhCCCCcC-CcccCCCcceEEEEEecCCCeEEEEeec-------------------------------------------
Q 044875           59 ATGGFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDF-------------------------------------------   94 (268)
Q Consensus        59 ~~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l-------------------------------------------   94 (268)
                      .|++|++. .+||-|-.|.|..+....+++.+|+|.+                                           
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVm  138 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVM  138 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeee
Confidence            45677654 5799999999999999889999999933                                           


Q ss_pred             --------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eeccC----
Q 044875           95 --------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYGMG----  146 (268)
Q Consensus        95 --------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~~~----  146 (268)
                                          .+...-.|.++|+.|+.|||+.+   |.|||+||+|+|......   .|+ |||++    
T Consensus       139 E~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  139 ECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             ecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEecccccccccC
Confidence                                22456789999999999999998   999999999999875432   222 55543    


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCccchhhhcchhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                            .+|+...|+||+|+++|-+++|.+||....+...  .....+..+..+..        
T Consensus       216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP--------  287 (400)
T KOG0604|consen  216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFP--------  287 (400)
T ss_pred             CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCC--------
Confidence                                  4578899999999999999999999986443221  11111222221111        


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                             .+.+          .+.++..-+++...+..+|.+|.|+.++++
T Consensus       288 -------~pEW----------s~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  288 -------EPEW----------SCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             -------ChhH----------hHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence                   1111          134555666777789999999999999874

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=9.1e-20  Score=151.42  Aligned_cols=122  Identities=25%  Similarity=0.393  Sum_probs=103.2

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec------------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF------------------------------------   94 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l------------------------------------   94 (268)
                      .+-.+..++ .+|+...+||.|+||.|..+.-..+.+.+|||.+                                    
T Consensus       340 ~~~~d~i~~-tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc  418 (683)
T KOG0696|consen  340 SSKRDRIKA-TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC  418 (683)
T ss_pred             CCcccceee-cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH
Confidence            444454344 5688889999999999999999888899999933                                    


Q ss_pred             -----------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           95 -----------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        95 -----------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                   ++......+..||-||-|||+.+   |+.||||..||+++.++..++ +||
T Consensus       419 FQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFG  495 (683)
T KOG0696|consen  419 FQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFG  495 (683)
T ss_pred             hhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecc
Confidence                                         33567788999999999999999   999999999999999999988 344


Q ss_pred             c---------------------------CCCcCccccEeechHHHHHHHhCCCCCCccc
Q 044875          145 M---------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMF  176 (268)
Q Consensus       145 ~---------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~  176 (268)
                      +                           ..+|+.++|-||||+++||++.|++||++..
T Consensus       496 mcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeD  554 (683)
T KOG0696|consen  496 MCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED  554 (683)
T ss_pred             cccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCC
Confidence            3                           3678999999999999999999999998643

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.79  E-value=3.1e-19  Score=144.27  Aligned_cols=126  Identities=29%  Similarity=0.408  Sum_probs=89.3

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------------------cCCCcC
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------------------MGNQFS  150 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------------------~~~~~~  150 (268)
                      ....++.+++.++.|||..+   ++|+|++|+||+++.+...++ +++                          ....++
T Consensus        88 ~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~  164 (244)
T smart00220       88 EARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYG  164 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHHHHccCCCC
Confidence            34578889999999999988   999999999999998866665 222                          124467


Q ss_pred             ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITI  230 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
                      .++|+||||++++++++|..|+...... ....+.............                          .....++
T Consensus       165 ~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~  217 (244)
T smart00220      165 KAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGKPKPPFPPPE--------------------------WKISPEA  217 (244)
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccCCCCcccc--------------------------ccCCHHH
Confidence            7999999999999999999998652111 111111111110000000                          0034568


Q ss_pred             HHHHHHcCCCCCCCCCChHHHHH
Q 044875          231 LKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       231 ~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+++.+||+.+|++||++.++++
T Consensus       218 ~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      218 KDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHccCCchhccCHHHHhh
Confidence            89999999999999999999986

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.4e-19  Score=145.72  Aligned_cols=118  Identities=24%  Similarity=0.415  Sum_probs=94.0

Q ss_pred             CHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC------------------------------------
Q 044875           52 SYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK------------------------------------   95 (268)
Q Consensus        52 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~------------------------------------   95 (268)
                      .++|+.+-|+     +.||+|+|+.|-.+..-.++..+|||.++                                    
T Consensus        74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd  148 (463)
T KOG0607|consen   74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD  148 (463)
T ss_pred             hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence            4677777665     56999999999999988899999999332                                    


Q ss_pred             --------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce---ee-eec-
Q 044875           96 --------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT---HV-EYG-  144 (268)
Q Consensus        96 --------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~---~i-e~~-  144 (268)
                                                +...-++.++|+.||.|||.++   |.|||+||+|||.......   |+ ||. 
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDL  225 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDL  225 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeecccc
Confidence                                      2456789999999999999999   9999999999997543221   22 111 


Q ss_pred             --------------------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          145 --------------------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       145 --------------------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                                            .+..|+.+.|.||+|+++|-|++|.+||.+.-+
T Consensus       226 gSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg  296 (463)
T KOG0607|consen  226 GSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCG  296 (463)
T ss_pred             ccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccC
Confidence                                                  123578999999999999999999999986543

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.79  E-value=2.8e-19  Score=148.27  Aligned_cols=159  Identities=24%  Similarity=0.320  Sum_probs=114.4

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||.|.-|+||.+++...+...|+|+++.                                             
T Consensus        78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me  157 (459)
T KOG0610|consen   78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME  157 (459)
T ss_pred             HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence            45556789999999999999998889999994432                                             


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee--------------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV--------------  141 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i--------------  141 (268)
                                           .....++.+|.-||.|||-.+   |+.|||||+|||+.+++..-+              
T Consensus       158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt  234 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPT  234 (459)
T ss_pred             cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCCCCe
Confidence                                 456678889999999999999   999999999999977654433              


Q ss_pred             ----------------------------------------------------------------------eeccCCCcCc
Q 044875          142 ----------------------------------------------------------------------EYGMGNQFST  151 (268)
Q Consensus       142 ----------------------------------------------------------------------e~~~~~~~~~  151 (268)
                                                                                            |...+...+.
T Consensus       235 ~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgs  314 (459)
T KOG0610|consen  235 LVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGS  314 (459)
T ss_pred             eeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCc
Confidence                                                                                  1111122357


Q ss_pred             cccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHH
Q 044875          152 NGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITIL  231 (268)
Q Consensus       152 ~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (268)
                      ++|-|+|||++|||+.|..||.+...+. .+.+.+....  .+++.                          .+..-.+.
T Consensus       315 AVDWWtfGIflYEmLyG~TPFKG~~~~~-Tl~NIv~~~l--~Fp~~--------------------------~~vs~~ak  365 (459)
T KOG0610|consen  315 AVDWWTFGIFLYEMLYGTTPFKGSNNKE-TLRNIVGQPL--KFPEE--------------------------PEVSSAAK  365 (459)
T ss_pred             hhhHHHHHHHHHHHHhCCCCcCCCCchh-hHHHHhcCCC--cCCCC--------------------------CcchhHHH
Confidence            8999999999999999999998754332 2222222111  11110                          02234467


Q ss_pred             HHHHHcCCCCCCCCCC----hHHHH
Q 044875          232 KIRVVCSIKSPQERMD----TSDVV  252 (268)
Q Consensus       232 ~l~~~C~~~~p~~RPs----~~~v~  252 (268)
                      +++...+..||.+|-.    +.||-
T Consensus       366 DLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  366 DLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             HHHHHHhccChhhhhccccchHHhh
Confidence            7888899999999988    55554

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.79  E-value=4.9e-20  Score=154.36  Aligned_cols=112  Identities=28%  Similarity=0.441  Sum_probs=97.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEe-----------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVR-----------------------------------------------   92 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK-----------------------------------------------   92 (268)
                      .+.|..-++||+||||.||-+....+|+.+|.|                                               
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            367888899999999999999998899998877                                               


Q ss_pred             -------------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee------------
Q 044875           93 -------------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------  141 (268)
Q Consensus        93 -------------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i------------  141 (268)
                                         .|++......+.+|+.||.+||...   |+.||+||+|||+|..++.++            
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence                               2333567889999999999999988   999999999999999999988            


Q ss_pred             ---------------eeccCCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          142 ---------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       142 ---------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                     |......|+...|-||+||++|||+.|..||..
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             CccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhh
Confidence                           333345689999999999999999999999974

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=3.1e-20  Score=155.42  Aligned_cols=130  Identities=26%  Similarity=0.450  Sum_probs=98.8

Q ss_pred             cccccCHHHHHHHhC--------------CCCcCCcccCCCcceEEEEEecCCCeEEEEee-------------------
Q 044875           47 LLLNISYESLLKATG--------------GFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-------------------   93 (268)
Q Consensus        47 ~~~~~~~~~l~~~~~--------------~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-------------------   93 (268)
                      .......++|+.+.+              +|-..+.||+|||+.|||+..-.....||+|.                   
T Consensus       435 rvrnlHiRELKRi~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHA  514 (775)
T KOG1151|consen  435 RVRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHA  514 (775)
T ss_pred             HHHHHHHHHHHhhcccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHH
Confidence            344455566666643              23345678999999999999988899999991                   


Q ss_pred             --------------------------------------------------cCccchhhHHHHHHHHHHHHhhcCCCCeee
Q 044875           94 --------------------------------------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVH  123 (268)
Q Consensus        94 --------------------------------------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h  123 (268)
                                                                        +++....+|+.+|+.+|.||.+.. +||+|
T Consensus       515 cREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEik-pPIIH  593 (775)
T KOG1151|consen  515 CREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIH  593 (775)
T ss_pred             HHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeee
Confidence                                                              111456789999999999999875 88999


Q ss_pred             cCCCCCccccCCCC---ceee-eeccC--------------------------------------CCcCccccEeechHH
Q 044875          124 CDSKPSNILLDNDM---TTHV-EYGMG--------------------------------------NQFSTNGDVYSYGKL  161 (268)
Q Consensus       124 ~dlk~~nill~~~~---~~~i-e~~~~--------------------------------------~~~~~~~Dv~s~G~v  161 (268)
                      -||||.|||+..+-   ..++ |||++                                      .+.+.|+||||.|++
T Consensus       594 YDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI  673 (775)
T KOG1151|consen  594 YDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI  673 (775)
T ss_pred             eccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehh
Confidence            99999999986542   2333 34432                                      235789999999999


Q ss_pred             HHHHHhCCCCCCcccc
Q 044875          162 LLEIFTGKRSTSDMFT  177 (268)
Q Consensus       162 l~el~tg~~p~~~~~~  177 (268)
                      +|+.+.|++||.....
T Consensus       674 FyQClYGrKPFGhnqs  689 (775)
T KOG1151|consen  674 FYQCLYGRKPFGHNQS  689 (775)
T ss_pred             hhhhhccCCCCCCchh
Confidence            9999999999986443

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.78  E-value=2.3e-19  Score=143.98  Aligned_cols=111  Identities=24%  Similarity=0.436  Sum_probs=88.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC----CeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD----QTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~l~~----------------------------------------   96 (268)
                      ..|+....||+|.||.|||+.-.++    ...+|+|.|..                                        
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v  103 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV  103 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence            4566678899999999999965333    23788884432                                        


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC----Cceee-ee
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----MTTHV-EY  143 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~----~~~~i-e~  143 (268)
                                                  ....+++-|+..|+.|||++-   ++||||||.||++..+    +..|+ |+
T Consensus       104 ~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaDl  180 (438)
T KOG0666|consen  104 WLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIADL  180 (438)
T ss_pred             EEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeecc
Confidence                                        345678899999999999988   9999999999999877    66666 33


Q ss_pred             cc-------------------------------CCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          144 GM-------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       144 ~~-------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                      |+                               +..||.+.||||.||++.|+++-++-|.+
T Consensus       181 GlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g  242 (438)
T KOG0666|consen  181 GLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG  242 (438)
T ss_pred             cHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence            32                               24589999999999999999998877764

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.78  E-value=6.4e-19  Score=155.84  Aligned_cols=70  Identities=27%  Similarity=0.457  Sum_probs=55.0

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCC-------------------------------
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQ-------------------------------  148 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~-------------------------------  148 (268)
                      .++.+++.++.|||..+   ++||||||+||+++.+...++ ||+....                               
T Consensus       313 ~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~  389 (507)
T PLN03224        313 GVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCP  389 (507)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCC
Confidence            35678899999999988   999999999999998877776 4443210                               


Q ss_pred             -----------------c--CccccEeechHHHHHHHhCCC-CCC
Q 044875          149 -----------------F--STNGDVYSYGKLLLEIFTGKR-STS  173 (268)
Q Consensus       149 -----------------~--~~~~Dv~s~G~vl~el~tg~~-p~~  173 (268)
                                       +  ..+.|+||+||+++||++|.. |+.
T Consensus       390 ~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        390 RAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             ccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence                             0  123699999999999999864 664

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.78  E-value=4.5e-20  Score=164.36  Aligned_cols=155  Identities=25%  Similarity=0.396  Sum_probs=112.1

Q ss_pred             CCcCCcccCCCcce-EEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           63 FSSANIIGAGSFGS-VCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~-Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      |+..+++|.|+-|+ ||+|.+  .++.||||++-.                                             
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~s  588 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCACS  588 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhhh
Confidence            56677899999985 899999  588999994322                                             


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC---C--ceee-eeccCC------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---M--TTHV-EYGMGN------  147 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~---~--~~~i-e~~~~~------  147 (268)
                                       ........+++.|+++||+.+   |+||||||.|||++..   +  .+++ ||+.+.      
T Consensus       589 L~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~  665 (903)
T KOG1027|consen  589 LQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK  665 (903)
T ss_pred             HHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCCCc
Confidence                             223678889999999999988   9999999999999872   3  3344 555432      


Q ss_pred             ------------------------CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          148 ------------------------QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       148 ------------------------~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              .-+.++|++|+||++|++++ |..||.+....+.++..-.....  .+...     
T Consensus       666 sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~--~L~~~-----  738 (903)
T KOG1027|consen  666 SSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLV--HLEPL-----  738 (903)
T ss_pred             chhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCcccee--eeccC-----
Confidence                                    23467899999999999999 58899865444332211110000  00000     


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                                           .++  +..+++..+++.+|..||++.+|+
T Consensus       739 ---------------------~d~--eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  739 ---------------------PDC--EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             ---------------------chH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence                                 022  577889999999999999999997

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.76  E-value=6.9e-19  Score=142.19  Aligned_cols=116  Identities=25%  Similarity=0.401  Sum_probs=98.8

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...++||+|.||.|-.++-..+++.+|+|.+.                                            
T Consensus       167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV  246 (516)
T KOG0690|consen  167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV  246 (516)
T ss_pred             cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence            478888999999999999999998899999999332                                            


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                          +.........|..||.|||+.+   |+.||+|.+|.++|.++..|+ +||+.        
T Consensus       247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~  323 (516)
T KOG0690|consen  247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGD  323 (516)
T ss_pred             EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcccccc
Confidence                                2334556778999999999988   999999999999999999998 44432        


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCccccc
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTE  178 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~  178 (268)
                                         ..|+.++|-|.+|+++|||++|+.||....++
T Consensus       324 t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~  374 (516)
T KOG0690|consen  324 TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE  374 (516)
T ss_pred             eeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence                               45889999999999999999999999865443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.75  E-value=2.1e-18  Score=159.18  Aligned_cols=73  Identities=34%  Similarity=0.541  Sum_probs=62.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm   83 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM   83 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence            567788899999999999999988899999994421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND  136 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~  136 (268)
                                          .....++.+++.||.|||..+   ++||||||+|||++.+
T Consensus        84 Ey~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~  140 (669)
T cd05610          84 EYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNE  140 (669)
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCC
Confidence                                235678899999999999987   9999999999998643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.75  E-value=3.1e-18  Score=135.19  Aligned_cols=169  Identities=16%  Similarity=0.272  Sum_probs=118.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|.+...||+|-||.+..++..++.+.+++|.++.                                            
T Consensus        24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~  103 (378)
T KOG1345|consen   24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEF  103 (378)
T ss_pred             hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeecc
Confidence            567778899999999999999998999999993332                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee---eeccCCC-------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV---EYGMGNQ-------  148 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i---e~~~~~~-------  148 (268)
                                       .....++.+++.|+.|+|+++   ++|||||.+|||+-. ++. ++   |||...+       
T Consensus       104 aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~-rvKlcDFG~t~k~g~tV~~  179 (378)
T KOG1345|consen  104 APRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFY-RVKLCDFGLTRKVGTTVKY  179 (378)
T ss_pred             CccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCcc-EEEeeecccccccCceehh
Confidence                             345678999999999999998   999999999999853 333 34   5665422       


Q ss_pred             ----------------------cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh---hhCccchhhhcchhhh
Q 044875          149 ----------------------FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK---MAVPDQISEVLDPLFV  203 (268)
Q Consensus       149 ----------------------~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~~~  203 (268)
                                            ..+.+|+|.||++++.+++|+.|+...........+|..   ...+ .++..+.    
T Consensus       180 ~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-~~P~~F~----  254 (378)
T KOG1345|consen  180 LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-ALPKKFN----  254 (378)
T ss_pred             hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-cCchhhc----
Confidence                                  356799999999999999999999843333333333322   1111 1222111    


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                           ....+..++...-+..+|.+|--..++..+.....
T Consensus       255 ---------------------~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w  289 (378)
T KOG1345|consen  255 ---------------------PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLW  289 (378)
T ss_pred             ---------------------ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHH
Confidence                                 12344666777788899998855555555444433

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.74  E-value=5.8e-18  Score=143.12  Aligned_cols=74  Identities=28%  Similarity=0.457  Sum_probs=62.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...++||.|.|++||.+......+.||+|+.+.                                            
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN  157 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN  157 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence            455677899999999999999988899999993221                                            


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND  136 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~  136 (268)
                                                   ....+|++||..||.|||..+  .|+|-||||+|||+..+
T Consensus       158 G~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  158 GQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST  224 (590)
T ss_pred             CcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence                                         345789999999999999965  49999999999998543

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.74  E-value=3e-18  Score=148.51  Aligned_cols=115  Identities=26%  Similarity=0.377  Sum_probs=97.6

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...+.|.+...||+|.|+.|..|....++..||+|.++.                                         
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl  132 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL  132 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence            345778888999999999999999999999999993322                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCC-----
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQ-----  148 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~-----  148 (268)
                                            ........|+.++++|||+++   |+|||||++|++++.+++.+| ||+++..     
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeecccc
Confidence                                  345567789999999999998   999999999999999998888 5554421     


Q ss_pred             ----------------------cCccccEeechHHHHHHHhCCCCCCcc
Q 044875          149 ----------------------FSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       149 ----------------------~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                            -+..+|+||+|+++|-+++|..||++.
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~  258 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ  258 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCc
Confidence                                  257899999999999999999999863

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.73  E-value=3.1e-18  Score=161.29  Aligned_cols=125  Identities=19%  Similarity=0.252  Sum_probs=86.5

Q ss_pred             cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-------------------CCceee-------------
Q 044875           94 FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-------------------DMTTHV-------------  141 (268)
Q Consensus        94 l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-------------------~~~~~i-------------  141 (268)
                      ++......++.|+++||.|||+.+   |+||||||+|||++.                   +...++             
T Consensus        77 ~~~~~~~~i~~qi~~al~~lH~~g---IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~  153 (793)
T PLN00181         77 VDAFECFHVFRQIVEIVNAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILS  153 (793)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhCC---eeeccCCchhEEEcccCcEEEeeccccCcccccccCccccccccccccccccc
Confidence            666788899999999999999988   999999999999943                   111111             


Q ss_pred             -------------------------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          142 -------------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       142 -------------------------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                                                     |...+..++.++|||||||++|||++|.+|+.....   ......... 
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~~-  229 (793)
T PLN00181        154 ERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHRV-  229 (793)
T ss_pred             ccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHhh-
Confidence                                           223345578999999999999999998887653110   011110000 


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                             +.+..                     .....+...++.+||+.||.+||++.++++
T Consensus       230 -------~~~~~---------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        230 -------LPPQI---------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             -------cChhh---------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence                   00000                     011223457778899999999999999974

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.73  E-value=4.2e-18  Score=152.64  Aligned_cols=172  Identities=20%  Similarity=0.338  Sum_probs=133.4

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec------------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF------------------------------------   94 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l------------------------------------   94 (268)
                      ..++.+...++.|.+..++|.|.+|.||+++...+++.+|+|.+                                    
T Consensus         9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~   88 (953)
T KOG0587|consen    9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKK   88 (953)
T ss_pred             cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence            34555666778899999999999999999999889999999933                                    


Q ss_pred             --------------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           95 --------------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        95 --------------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                      .+.....|+..++.|+.+||.+.   ++|||+|-.|||++.+...|+ 
T Consensus        89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLv  165 (953)
T KOG0587|consen   89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLV  165 (953)
T ss_pred             cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEe
Confidence                                            23566788999999999999988   999999999999999888877 


Q ss_pred             eeccC--------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh
Q 044875          142 EYGMG--------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA  189 (268)
Q Consensus       142 e~~~~--------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~  189 (268)
                      +||.+                                ..|+..+|+||+|++..|+.-|.+|+.++.+....+      .
T Consensus       166 DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF------~  239 (953)
T KOG0587|consen  166 DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF------L  239 (953)
T ss_pred             eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc------c
Confidence            45433                                247789999999999999999999998764432110      1


Q ss_pred             CccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          190 VPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       190 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .++..++    .+                  ..+....+++.+++..|+..|-+.||++.+++.
T Consensus       240 IpRNPPP----kL------------------krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  240 IPRNPPP----KL------------------KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             CCCCCCc----cc------------------cchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            1111111    11                  111356788999999999999999999998873

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=7e-18  Score=154.80  Aligned_cols=119  Identities=24%  Similarity=0.396  Sum_probs=101.5

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec--------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF--------------------------------------   94 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l--------------------------------------   94 (268)
                      ..++.-..++|.+..+||+|+||.|...+...+++++|.|.+                                      
T Consensus        67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD  146 (1317)
T KOG0612|consen   67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD  146 (1317)
T ss_pred             HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence            345555568899999999999999999999999999999932                                      


Q ss_pred             --------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--
Q 044875           95 --------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--  145 (268)
Q Consensus        95 --------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--  145 (268)
                                                ++.....++..|.-||.-+|..+   .||||+||.|||+|..+..++ |||.  
T Consensus       147 ~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsCl  223 (1317)
T KOG0612|consen  147 ERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSCL  223 (1317)
T ss_pred             ccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhHH
Confidence                                      22445667788999999999999   999999999999999998888 3331  


Q ss_pred             ------------------------------C-CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          146 ------------------------------G-NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       146 ------------------------------~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                                    + +.|+..+|-||+||++|||+.|..||..
T Consensus       224 km~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  224 KMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             hcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH
Confidence                                          2 5689999999999999999999999974

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.72  E-value=1.3e-18  Score=148.54  Aligned_cols=125  Identities=25%  Similarity=0.440  Sum_probs=95.3

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      +++||+|-||+||-|....+|+.||||.++.                                                 
T Consensus       569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD  648 (888)
T KOG4236|consen  569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD  648 (888)
T ss_pred             HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence            5789999999999999999999999994332                                                 


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eecc------------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGM------------  145 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~------------  145 (268)
                                     .....+..||..||.|||.++   |+|+||||+|||+.+..   ..|+ |||.            
T Consensus       649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrs  725 (888)
T KOG4236|consen  649 MLEMILSSEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRS  725 (888)
T ss_pred             HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhhhhhh
Confidence                           234567789999999999999   99999999999997531   1222 4443            


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ  193 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~  193 (268)
                                    ...|...-|+||.|+++|--++|.-||.+..+....+++...+..+..
T Consensus       726 VVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~P  787 (888)
T KOG4236|consen  726 VVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNP  787 (888)
T ss_pred             hcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCc
Confidence                          345778899999999999999999999865444444444444444433

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.72  E-value=6.7e-18  Score=137.12  Aligned_cols=111  Identities=23%  Similarity=0.398  Sum_probs=96.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      ++|....+||+|+|..|..+++..+.+.+|+|                                                
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            46888899999999999999999999999998                                                


Q ss_pred             -----------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee-----------
Q 044875           93 -----------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY-----------  143 (268)
Q Consensus        93 -----------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~-----------  143 (268)
                                       .+++++.......|.-+|.|||+.+   |+.||||..|+|++.++..|+ +|           
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~l~~gd  406 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD  406 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence                             2333556677888999999999999   999999999999999988888 23           


Q ss_pred             ----------------ccCCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          144 ----------------GMGNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       144 ----------------~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                      ..+..|+..+|-|++|++++||+.|+.||+-
T Consensus       407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdi  453 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDI  453 (593)
T ss_pred             ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcce
Confidence                            3345688899999999999999999999983

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.71  E-value=4e-18  Score=144.84  Aligned_cols=110  Identities=27%  Similarity=0.460  Sum_probs=89.3

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEe--------------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVR--------------------------------------------------   92 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK--------------------------------------------------   92 (268)
                      ++....||-||||.|=.....+.....|+|                                                  
T Consensus       422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEa  501 (732)
T KOG0614|consen  422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEA  501 (732)
T ss_pred             hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHh
Confidence            344577999999999988886444446666                                                  


Q ss_pred             --------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           93 --------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        93 --------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                    .|++.....++..+.+|+.|||.++   |+.|||||+|++++.++.+|+ |||++           
T Consensus       502 ClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwT  578 (732)
T KOG0614|consen  502 CLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWT  578 (732)
T ss_pred             hcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccCCceee
Confidence                          3333556678888999999999999   999999999999999988887 55543           


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                     ...+.++|.||+|++++|+++|.+||...
T Consensus       579 FcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~  622 (732)
T KOG0614|consen  579 FCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV  622 (732)
T ss_pred             ecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC
Confidence                           23467899999999999999999999863

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.68  E-value=8.5e-17  Score=133.87  Aligned_cols=195  Identities=21%  Similarity=0.264  Sum_probs=124.6

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecCc------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~------------------------------------   96 (268)
                      +....+.|...+++|+|+|++||++++..   .+..||+|.+..                                    
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v  110 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV  110 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence            44445678888999999999999999876   678999994332                                    


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce--eeeeccC-------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT--HVEYGMG-------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~--~ie~~~~-------  146 (268)
                                           .........+..||.++|.++   |+|||+||+|+|.+..-..  .+||+++       
T Consensus       111 ~ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~  187 (418)
T KOG1167|consen  111 AIVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQ  187 (418)
T ss_pred             EEEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHHHHHhhh
Confidence                                 345667788999999999999   9999999999998753222  1122221       


Q ss_pred             -----------------------------------------------------------------CCcCccccEeechHH
Q 044875          147 -----------------------------------------------------------------NQFSTNGDVYSYGKL  161 (268)
Q Consensus       147 -----------------------------------------------------------------~~~~~~~Dv~s~G~v  161 (268)
                                                                                       ..-++++||||.|++
T Consensus       188 ~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI  267 (418)
T KOG1167|consen  188 QTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVI  267 (418)
T ss_pred             hhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccce
Confidence                                                                             113678999999999


Q ss_pred             HHHHHhCCCCCCcccccccchhhHhhhhCccchh---hhcch-------------hhhcCCCcc----chhhhHHhhhhh
Q 044875          162 LLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS---EVLDP-------------LFVAGGEEE----GEKTAEENIKKG  221 (268)
Q Consensus       162 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~-------------~~~~~~~~~----~~~~~~~~~~~~  221 (268)
                      ++-+++++.||.....+-..+.+.+..-....+.   -..+.             .+.......    ..+..+.+....
T Consensus       268 ~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~  347 (418)
T KOG1167|consen  268 LLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTERE  347 (418)
T ss_pred             eehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeec
Confidence            9999999999986555544444443322221111   11111             000000000    000000000011


Q ss_pred             chHH-HHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          222 QIQE-SLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       222 ~~~~-~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .-.+ .+..++.+...|++.||.+|-|+++.+.
T Consensus       348 ~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  348 IGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             cccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence            1112 2336889999999999999999999873

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.66  E-value=4.7e-16  Score=122.57  Aligned_cols=121  Identities=28%  Similarity=0.524  Sum_probs=97.3

Q ss_pred             ccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------------
Q 044875           69 IGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------------   96 (268)
Q Consensus        69 lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------------   96 (268)
                      ||+|++|.||++....+++.+++|.+..                                                    
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            6899999999999987789999993322                                                    


Q ss_pred             -----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccC-----------------
Q 044875           97 -----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMG-----------------  146 (268)
Q Consensus        97 -----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~-----------------  146 (268)
                                 .....++.++++++.|||+.+   ++|+|++|.||+++. +...++ +++..                 
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~  157 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTP  157 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCC
Confidence                       234568889999999999988   999999999999998 555554 22211                 


Q ss_pred             ----------C-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhH
Q 044875          147 ----------N-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAE  215 (268)
Q Consensus       147 ----------~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~  215 (268)
                                . ..+.++|+|++|++++++                                                  
T Consensus       158 ~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------------  187 (215)
T cd00180         158 AYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------------  187 (215)
T ss_pred             CccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------------------
Confidence                      1 455778999999999998                                                  


Q ss_pred             HhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          216 ENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                  ..+.+++..|++.||++||++.+++..
T Consensus       188 ------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence                        127788888999999999999998764

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.66  E-value=1.8e-16  Score=135.18  Aligned_cols=205  Identities=18%  Similarity=0.209  Sum_probs=133.5

Q ss_pred             ccccccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------
Q 044875           44 RKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------   96 (268)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------   96 (268)
                      ..++...+.+.++..  +.|......|+|-|++|..|.....|+.||||.+..                           
T Consensus       417 DaEGYYrv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~  494 (752)
T KOG0670|consen  417 DAEGYYRVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKF  494 (752)
T ss_pred             cccceEEEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhh
Confidence            334444455555544  456666678999999999999988899999993322                           


Q ss_pred             -----------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC
Q 044875           97 -----------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN  135 (268)
Q Consensus        97 -----------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~  135 (268)
                                                               .....++.|+..||..|-..+   ++|.||||.|||+++
T Consensus       495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE  571 (752)
T KOG0670|consen  495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNE  571 (752)
T ss_pred             HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEecc
Confidence                                                     234567888999999999888   999999999999987


Q ss_pred             CCcee-e--------------------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhH-hh
Q 044875          136 DMTTH-V--------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF-VK  187 (268)
Q Consensus       136 ~~~~~-i--------------------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~-~~  187 (268)
                      ..+.. +                          |..++.+|+...|+||.||.+||+.||+--|++...+...-..+ +.
T Consensus       572 ~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K  651 (752)
T KOG0670|consen  572 SKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK  651 (752)
T ss_pred             CcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence            64432 2                          55566789999999999999999999999988765543221111 11


Q ss_pred             hhCcc-------chhhhcchhhhcCCCcc----------------chhhhHHhhhh-----hchHHHHHHHHHHHHHcCC
Q 044875          188 MAVPD-------QISEVLDPLFVAGGEEE----------------GEKTAEENIKK-----GQIQESLITILKIRVVCSI  239 (268)
Q Consensus       188 ~~~~~-------~~~~~~d~~~~~~~~~~----------------~~~~~~~~~~~-----~~~~~~~~~~~~l~~~C~~  239 (268)
                      ..+|.       ....-+|..+.--..+.                ..+.....+..     +.....+..+..|...|+.
T Consensus       652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~  731 (752)
T KOG0670|consen  652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI  731 (752)
T ss_pred             CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence            11221       12223333221100000                00111111111     1112345567778888999


Q ss_pred             CCCCCCCChHHHHH
Q 044875          240 KSPQERMDTSDVVN  253 (268)
Q Consensus       240 ~~p~~RPs~~~v~~  253 (268)
                      .||+.|-|..+.+.
T Consensus       732 LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  732 LDPEKRITVNQALK  745 (752)
T ss_pred             cChhhcCCHHHHhc
Confidence            99999999988764

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.63  E-value=1.8e-16  Score=125.56  Aligned_cols=133  Identities=18%  Similarity=0.297  Sum_probs=96.7

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeec-------c-CCCc------------------C
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYG-------M-GNQF------------------S  150 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~-------~-~~~~------------------~  150 (268)
                      .+..+++.++++|++|||+.. +-|....|.++.+++|++.++++..+       . +..|                  -
T Consensus       289 sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~  367 (448)
T KOG0195|consen  289 SQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNI  367 (448)
T ss_pred             chHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcch
Confidence            567899999999999999975 45667789999999999999988211       1 1111                  2


Q ss_pred             ccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHH
Q 044875          151 TNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITI  230 (268)
Q Consensus       151 ~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (268)
                      .++|+|||++++||+.|++-||.+..+......-..     +.+..                        ..+......+
T Consensus       368 raadmwsfaillwel~trevpfadlspmecgmkial-----eglrv------------------------~ippgis~hm  418 (448)
T KOG0195|consen  368 RAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-----EGLRV------------------------HIPPGISRHM  418 (448)
T ss_pred             hhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----ccccc------------------------cCCCCccHHH
Confidence            468999999999999999999987654332111110     01111                        1111344557


Q ss_pred             HHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          231 LKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       231 ~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .++|.-|+..||.+||.+..|+..|+++.
T Consensus       419 ~klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  419 NKLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            78888899999999999999999998864

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.60  E-value=9.9e-16  Score=133.59  Aligned_cols=123  Identities=24%  Similarity=0.415  Sum_probs=97.1

Q ss_pred             CHHHHHHHh---CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------
Q 044875           52 SYESLLKAT---GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------   94 (268)
Q Consensus        52 ~~~~l~~~~---~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------   94 (268)
                      .|-.|+.+.   .-|-..+.||-|+||.|..++-.++...+|.|.|                                  
T Consensus       617 nYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyy  696 (1034)
T KOG0608|consen  617 NYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYY  696 (1034)
T ss_pred             hHHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEE
Confidence            455565553   4577778899999999999988767777777722                                  


Q ss_pred             ------------------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee
Q 044875           95 ------------------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY  143 (268)
Q Consensus        95 ------------------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~  143 (268)
                                                    .+......+.++..++.+.|..+   ++||||||.|||+|.++..|+ ||
T Consensus       697 SFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDF  773 (1034)
T KOG0608|consen  697 SFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDF  773 (1034)
T ss_pred             EeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeec
Confidence                                          22334556678889999999999   999999999999999999988 34


Q ss_pred             ccC---------------------------------------------------------------------CCcCcccc
Q 044875          144 GMG---------------------------------------------------------------------NQFSTNGD  154 (268)
Q Consensus       144 ~~~---------------------------------------------------------------------~~~~~~~D  154 (268)
                      |+.                                                                     ..|+..+|
T Consensus       774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd  853 (1034)
T KOG0608|consen  774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD  853 (1034)
T ss_pred             cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence            322                                                                     23677899


Q ss_pred             EeechHHHHHHHhCCCCCCcccc
Q 044875          155 VYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       155 v~s~G~vl~el~tg~~p~~~~~~  177 (268)
                      -||.|++|+||+.|+.||.....
T Consensus       854 wws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  854 WWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             hhHhhHHHHHHhhCCCCccCCCC
Confidence            99999999999999999976544

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.59  E-value=2.8e-15  Score=121.03  Aligned_cols=75  Identities=29%  Similarity=0.486  Sum_probs=64.2

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------------------cCCCc
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------------------MGNQF  149 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------------------~~~~~  149 (268)
                      .....+..|++.|+.|||+.+   |+||||||+||++..+...|+ +||                          .+..|
T Consensus       118 ~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~  194 (369)
T KOG0665|consen  118 ETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGY  194 (369)
T ss_pred             HHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhhcccCcccccCchhheeeccCchheeccCC
Confidence            456678899999999999998   999999999999999988888 233                          23347


Q ss_pred             CccccEeechHHHHHHHhCCCCCCc
Q 044875          150 STNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                      ...+||||.||++.|+++|.--|.+
T Consensus       195 ke~vdiwSvGci~gEli~~~Vlf~g  219 (369)
T KOG0665|consen  195 KENVDIWSVGCIMGELILGTVLFPG  219 (369)
T ss_pred             cccchhhhhhhHHHHHhhceEEecC
Confidence            8899999999999999999877763

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.55  E-value=1.3e-14  Score=116.05  Aligned_cols=109  Identities=31%  Similarity=0.471  Sum_probs=87.4

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |...+.||+|+||.||++....+++.+++|.+..                                              
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            3456789999999999999987788999994431                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------  144 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------  144 (268)
                                       .....++.+++.++.|||..+   ++|+|++++|++++.+...++ +++              
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~  157 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLK  157 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccc
Confidence                             124567889999999999987   999999999999998766554 221              


Q ss_pred             ---------------cCCCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          145 ---------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       145 ---------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                     ....++.++|+|+||++++|+++|+.||+.
T Consensus       158 ~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      158 TVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             ceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence                           113345689999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.52  E-value=6e-15  Score=127.44  Aligned_cols=110  Identities=21%  Similarity=0.394  Sum_probs=92.0

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEee------------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRD------------------------------------------------   93 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~------------------------------------------------   93 (268)
                      +|.....+|+|+||.|+.+....+...|.+|.                                                
T Consensus       562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd  641 (772)
T KOG1152|consen  562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD  641 (772)
T ss_pred             cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence            46777889999999999999988888999992                                                


Q ss_pred             -------------------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           94 -------------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        94 -------------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                               +++....-|.+||+.|+++||+.+   |+|||||-+|+.++.++.+++ +||.+ 
T Consensus       642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidfgsaa  718 (772)
T KOG1152|consen  642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDFGSAA  718 (772)
T ss_pred             CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeeccchh
Confidence                                     122445678999999999999999   999999999999999988877 44432 


Q ss_pred             ------------------------CC-cCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 ------------------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 ------------------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                              .+ .+..-|+|++|+++|.++..+.||.+
T Consensus       719 ~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  719 YTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             hhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence                                    22 35678999999999999999999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.52  E-value=6e-15  Score=129.26  Aligned_cols=166  Identities=17%  Similarity=0.275  Sum_probs=120.5

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|.....+|+|+||.|||++...+++..|+|..+.                                          
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            34677778889999999999999998999999993322                                          


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .+....+++..+|++|||+.+   =+|||+|-.||+++..+..++ ||+.+          
T Consensus        93 ycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqitati~Kr  169 (829)
T KOG0576|consen   93 YCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKR  169 (829)
T ss_pred             ecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhhhhhhh
Confidence                               344566778889999999988   789999999999998777776 34432          


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          +.|...+|+|+.|+...|+.--.+|..+..... .+.-+...++.+       |.+.+. 
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr-~l~LmTkS~~qp-------p~lkDk-  240 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR-ALFLMTKSGFQP-------PTLKDK-  240 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH-HHHHhhccCCCC-------CcccCC-
Confidence                                447789999999999999987777766532221 111222222211       111111 


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       .....-+.++++.|+-.+|.+||+++.+++
T Consensus       241 -----------------~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  241 -----------------TKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             -----------------ccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence                             133455788888999999999999988764

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.51  E-value=2.3e-14  Score=117.36  Aligned_cols=109  Identities=20%  Similarity=0.288  Sum_probs=74.2

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec--------------------------------c
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG--------------------------------M  145 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~--------------------------------~  145 (268)
                      ++.+..|+.+..++||+.+   ++|+||+++|++++.++...+ +|.                                .
T Consensus       147 rl~lT~Q~I~lvA~Lh~~G---lVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~  223 (288)
T PF14531_consen  147 RLSLTVQMIRLVANLHSYG---LVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQN  223 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHS
T ss_pred             HHHHHHHHHHHHHHHhhcc---eEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcc
Confidence            4566688899999999999   999999999999999887766 100                                0


Q ss_pred             CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          146 GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       146 ~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      .-.++.+.|.|++|+++|.+.++..|+...........                  ....|                 .+
T Consensus       224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------------------~f~~C-----------------~~  268 (288)
T PF14531_consen  224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------------------DFSRC-----------------RD  268 (288)
T ss_dssp             EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------------------GGTTS-----------------S-
T ss_pred             cceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------------------cchhc-----------------CC
Confidence            12367888999999999999999999986433322110                  00111                 15


Q ss_pred             HHHHHHHHHHHcCCCCCCCC
Q 044875          226 SLITILKIRVVCSIKSPQER  245 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~R  245 (268)
                      .++.+..++...++.||++|
T Consensus       269 ~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  269 MPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             --HHHHHHHHHHT-SSGGGS
T ss_pred             cCHHHHHHHHHHccCCcccC
Confidence            56678888888999999987

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.50  E-value=4.5e-14  Score=122.78  Aligned_cols=144  Identities=22%  Similarity=0.302  Sum_probs=102.3

Q ss_pred             ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------------
Q 044875           93 DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------------  146 (268)
Q Consensus        93 ~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------------  146 (268)
                      .+++.+...+.++++.||+|||...  -..|+.++++|++++..|..|+ +||..                         
T Consensus        44 ~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPe  121 (484)
T KOG1023|consen   44 KLDYFFILSFIRDISKGLAYLHNSP--IGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPE  121 (484)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhcCc--ceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHH
Confidence            3566788899999999999999854  2389999999999999998888 23221                         


Q ss_pred             -----------CCcCccccEeechHHHHHHHhCCCCCCcccccc--cchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          147 -----------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG--LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       147 -----------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                 ...+.+.|+||||++++|++++..||+......  ..+...+.......+.+.+...            
T Consensus       122 llr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~------------  189 (484)
T KOG1023|consen  122 LLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELL------------  189 (484)
T ss_pred             HhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhh------------
Confidence                       114678999999999999999999998643222  2232332221111111111110            


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                .+....+..++..||..+|+.||++++|-..++.+..
T Consensus       190 ----------~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  190 ----------NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK  226 (484)
T ss_pred             ----------hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence                      0223368999999999999999999999988877654

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.43  E-value=3.5e-13  Score=105.25  Aligned_cols=175  Identities=21%  Similarity=0.283  Sum_probs=116.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------------   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------------   93 (268)
                      +.|...++||+|+||.+|.|..-.+|+.||+|.                                               
T Consensus        15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLG   94 (341)
T KOG1163|consen   15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLG   94 (341)
T ss_pred             cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeeccC
Confidence            667788899999999999999988999999991                                               


Q ss_pred             -------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce----eeeeccCCCc-------
Q 044875           94 -------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT----HVEYGMGNQF-------  149 (268)
Q Consensus        94 -------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~----~ie~~~~~~~-------  149 (268)
                                   |+-.+.+-++-|+..-+.|+|..+   .+||||||.|.|..-+...    .+|||++.+|       
T Consensus        95 PsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~  171 (341)
T KOG1163|consen   95 PSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQ  171 (341)
T ss_pred             ccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhhccccccc
Confidence                         112455677888999999999998   9999999999998644322    3377766432       


Q ss_pred             ---------------------------CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          150 ---------------------------STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       150 ---------------------------~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                                 +..-|+=|+|-++...-.|..||.+.......  +..+.....++...+....
T Consensus       172 HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~--QKyEkI~EkK~s~~ie~LC  249 (341)
T KOG1163|consen  172 HIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKK--QKYEKISEKKMSTPIEVLC  249 (341)
T ss_pred             cCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHH--HHHHHHHHhhcCCCHHHHh
Confidence                                       34568899998888888899999876443211  0111100001111111111


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                           ...+.++...+.-|-..--++-|.-.-+.+...-+..+
T Consensus       250 ---------------------~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~  287 (341)
T KOG1163|consen  250 ---------------------KGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRT  287 (341)
T ss_pred             ---------------------CCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhh
Confidence                                 12344566666778777777777766666555554433

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.37  E-value=4.3e-12  Score=103.49  Aligned_cols=114  Identities=24%  Similarity=0.400  Sum_probs=94.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEe------------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR------------------------------------------------   92 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK------------------------------------------------   92 (268)
                      -+|...++||+|+||..+.|++--+++.||||                                                
T Consensus        28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG  107 (449)
T KOG1165|consen   28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG  107 (449)
T ss_pred             ccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC
Confidence            46888899999999999999998899999999                                                


Q ss_pred             ------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce------eeeeccCCC------
Q 044875           93 ------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT------HVEYGMGNQ------  148 (268)
Q Consensus        93 ------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~------~ie~~~~~~------  148 (268)
                                  +|+..+...+++|+..-+.|+|+++   ++.|||||+|.|+....+.      .+|||++..      
T Consensus       108 PSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T  184 (449)
T KOG1165|consen  108 PSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT  184 (449)
T ss_pred             cCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence                        3333566789999999999999998   9999999999999765433      227776633      


Q ss_pred             ----------------------------cCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          149 ----------------------------FSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       149 ----------------------------~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                                  -+..-|.=|+|-++...+.|..||.+...
T Consensus       185 kqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  185 KQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             cccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence                                        23457899999999999999999987543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.36  E-value=2.3e-12  Score=109.88  Aligned_cols=94  Identities=23%  Similarity=0.320  Sum_probs=76.1

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecC-CCeEEEEeecC-------c---------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDP-DQTVVSVRDFK-------P---------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~l~-------~---------------------------------   96 (268)
                      ...++|...+.||+|+||+||+|.... +++.+|+|.+.       .                                 
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~~~~~   94 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLATGKDG   94 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEcCCcE
Confidence            445789999999999999999998864 67888998532       0                                 


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCC-CCCccccCCCCceee-eeccCCCcCcccc
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDS-KPSNILLDNDMTTHV-EYGMGNQFSTNGD  154 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dl-k~~nill~~~~~~~i-e~~~~~~~~~~~D  154 (268)
                                      .....++.+++++|.|||+.+   ++|||| ||+||+++.+...++ |||.+..+..++.
T Consensus        95 LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~  167 (365)
T PRK09188         95 LVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGA  167 (365)
T ss_pred             EEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccceecccCcc
Confidence                            012467888999999999988   999999 999999988776666 9999887776653

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.35  E-value=8.8e-13  Score=121.75  Aligned_cols=159  Identities=18%  Similarity=0.252  Sum_probs=107.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      ++...+.||++.|=.|.+|+.. .|. |.||+|-.                                             
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq  101 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ  101 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence            4556678999999999999997 555 78885432                                             


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-----------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-----------------  141 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-----------------  141 (268)
                                        .++.-|+.|+..|+..+|..+   ++|+|||.+|||+++=-...+                 
T Consensus       102 yvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPa  178 (1431)
T KOG1240|consen  102 YVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPA  178 (1431)
T ss_pred             HHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCCcc
Confidence                              244568889999999999988   999999999999975211111                 


Q ss_pred             eec----------------------------cCCC-cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCc
Q 044875          142 EYG----------------------------MGNQ-FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVP  191 (268)
Q Consensus       142 e~~----------------------------~~~~-~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  191 (268)
                      ||.                            .... .+.+-||||.||++.|+++ |+++|...     .+..+.... .
T Consensus       179 df~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~-~  252 (1431)
T KOG1240|consen  179 DFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN-A  252 (1431)
T ss_pred             cceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC-c
Confidence            111                            1112 6778899999999999998 67777521     111111111 0


Q ss_pred             cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          192 DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       192 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                      .....     +....+                   -..+.++++.+++.||+.|-|+++.++.=
T Consensus       253 ~~~e~-----~Le~Ie-------------------d~~~Rnlil~Mi~rdPs~RlSAedyL~~y  292 (1431)
T KOG1240|consen  253 DDPEQ-----LLEKIE-------------------DVSLRNLILSMIQRDPSKRLSAEDYLQKY  292 (1431)
T ss_pred             cCHHH-----HHHhCc-------------------CccHHHHHHHHHccCchhccCHHHHHHhh
Confidence            00000     000000                   11477888899999999999999998763

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.30  E-value=3.5e-11  Score=102.03  Aligned_cols=171  Identities=22%  Similarity=0.235  Sum_probs=116.3

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCC-eEEEEe------------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQ-TVVSVR------------------------------------------------   92 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK------------------------------------------------   92 (268)
                      +|.....||+|+||.||.+....++ ..+|+|                                                
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i   98 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI   98 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence            7888899999999999999986553 567777                                                


Q ss_pred             -------------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC------ceeeeeccCC
Q 044875           93 -------------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM------TTHVEYGMGN  147 (268)
Q Consensus        93 -------------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~------~~~ie~~~~~  147 (268)
                                         .|+..+.++++.|+..+|.++|+.+   ++|||+||.|+++....      ...+|||.+.
T Consensus        99 VM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen   99 VMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             EEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence                               1111456889999999999999999   99999999999998653      1122666554


Q ss_pred             --C-----------------------------------cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          148 --Q-----------------------------------FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       148 --~-----------------------------------~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                        +                                   .+.+-|+||++-++.|+..|..|+........ .........
T Consensus       176 ~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~  254 (322)
T KOG1164|consen  176 RFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPR  254 (322)
T ss_pred             cccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhh
Confidence              1                                   23567999999999999999999864322111 111111111


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ......         .                ....+..+..+...+-..+..++|.-..+...|+.....
T Consensus       255 ~~~~~~---------~----------------~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  255 KLLTDR---------F----------------GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             hhcccc---------c----------------cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            000000         0                002334456666667778999999999998887766554

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.24  E-value=3.5e-11  Score=100.49  Aligned_cols=125  Identities=21%  Similarity=0.284  Sum_probs=83.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC--CCCceee---eeccC--------------------C------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD--NDMTTHV---EYGMG--------------------N------  147 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~--~~~~~~i---e~~~~--------------------~------  147 (268)
                      ..-++.|+.+|..|||.++   +.|||+|+.|||+-  .|..+.+   |||..                    +      
T Consensus       343 ~~~~laQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmA  419 (598)
T KOG4158|consen  343 GRVILAQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMA  419 (598)
T ss_pred             HHHHHHHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecc
Confidence            4567889999999999998   99999999999974  3332222   33211                    0      


Q ss_pred             ---------C----cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          148 ---------Q----FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       148 ---------~----~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                               +    --.|+|.|+.|.+.||++....||........+...+.+...|. +++                  
T Consensus       420 PEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPa-lp~------------------  480 (598)
T KOG4158|consen  420 PEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPA-LPS------------------  480 (598)
T ss_pred             hhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCC-Ccc------------------
Confidence                     0    12589999999999999999999976333333333333222221 111                  


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                .++..+.++...-++.||++|||..-..+.|
T Consensus       481 ----------~vpp~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  481 ----------RVPPVARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             ----------cCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence                      3344467777888999999999976555444

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.22  E-value=2.1e-11  Score=95.38  Aligned_cols=47  Identities=15%  Similarity=0.241  Sum_probs=37.5

Q ss_pred             hhhHHHHHHHHHHHH-hhcCCCCeeecCCCCCccccCCCCceeeeeccCCC
Q 044875           99 RLSIAIDVASALEYL-HHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yL-h~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~  148 (268)
                      ...++.+++.++.|+ |+.+   ++|||+||+||+++.+....+|||.+..
T Consensus       119 ~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~~~~v~LiDFG~a~~  166 (190)
T cd05147         119 ARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYHDGKLYIIDVSQSVE  166 (190)
T ss_pred             HHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEECCcEEEEEcccccc
Confidence            345678899999999 6777   9999999999999865444458887653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.21  E-value=2e-11  Score=110.78  Aligned_cols=137  Identities=15%  Similarity=0.212  Sum_probs=94.0

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------  146 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------  146 (268)
                      .....+.+|+..|+.|+|+.+   +.|||+|++|+++..++..++ +|+.+                             
T Consensus       420 ~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~  496 (601)
T KOG0590|consen  420 LEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVL  496 (601)
T ss_pred             hhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccc
Confidence            345678899999999999999   999999999999999987776 33322                             


Q ss_pred             --CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhch
Q 044875          147 --NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQI  223 (268)
Q Consensus       147 --~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~  223 (268)
                        ..| ....||||.|+++..|.+|+.||.-.......+   ..............+                   ....
T Consensus       497 ~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~~~~~-------------------~~~~  554 (601)
T KOG0590|consen  497 TGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNIFEGP-------------------NRLL  554 (601)
T ss_pred             cccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhccccccccccCh-------------------HHHH
Confidence              122 245899999999999999999987433332221   000000000000000                   0011


Q ss_pred             HHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          224 QESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       224 ~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                      ...+.+...++...++.||..|-|+++|++  +++.+
T Consensus       555 ~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  555 SLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             HhchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            255667788899999999999999999995  55544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.20  E-value=5.3e-11  Score=93.21  Aligned_cols=48  Identities=19%  Similarity=0.221  Sum_probs=39.0

Q ss_pred             hhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eeccCCCcC
Q 044875           99 RLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFS  150 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~~  150 (268)
                      ...++.+++.++.++|+ .+   ++|||+||+||+++ +...++ |||......
T Consensus       119 ~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         119 AEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            45778899999999999 88   99999999999998 444444 888775444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.17  E-value=3.2e-11  Score=96.09  Aligned_cols=101  Identities=14%  Similarity=0.208  Sum_probs=78.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.+|.|+||.||....  ++..+|+|.+.+                                           
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~  107 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA  107 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence            47888899999999999999655  466799995542                                           


Q ss_pred             --------------------c-------chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccC---
Q 044875           97 --------------------C-------TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMG---  146 (268)
Q Consensus        97 --------------------~-------~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~---  146 (268)
                                          .       .......+++.++..+|..+   ++|+|++|+|++++.++...+||+..   
T Consensus       108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~gi~liDfg~~~~~  184 (232)
T PRK10359        108 ERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNGLRIIDLSGKRCT  184 (232)
T ss_pred             ccccccccCCeEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCCEEEEECCCcccc
Confidence                                0       01234568999999999998   99999999999999877444476644   


Q ss_pred             ------------CCcCccccEeechHHHHHH
Q 044875          147 ------------NQFSTNGDVYSYGKLLLEI  165 (268)
Q Consensus       147 ------------~~~~~~~Dv~s~G~vl~el  165 (268)
                                  ..|+.++|+||||+.+.-.
T Consensus       185 ~e~~a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        185 AQRKAKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             cchhhHHHHHHHhHhcccccccceeEeehHH
Confidence                        2356789999999876544

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.15  E-value=1.7e-10  Score=107.61  Aligned_cols=78  Identities=26%  Similarity=0.387  Sum_probs=63.8

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEee-----------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRD-----------------------------------------   93 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~-----------------------------------------   93 (268)
                      +.+.....|.+.+.+|+|+||+||+|...+ ++.+|+|.                                         
T Consensus       692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  692 EFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             eeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence            333444568888999999999999999985 99999991                                         


Q ss_pred             --------------------cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC
Q 044875           94 --------------------FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND  136 (268)
Q Consensus        94 --------------------l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~  136 (268)
                                          +++.-...++.+++.-+..||..+   |||+||||.|.++...
T Consensus       771 lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~  830 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRRE  830 (974)
T ss_pred             eeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecc
Confidence                                111345678889999999999998   9999999999998653

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.08  E-value=4.9e-11  Score=110.09  Aligned_cols=115  Identities=25%  Similarity=0.369  Sum_probs=88.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------cchh----hHHHHHHHHHHHHhhc
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------CTRL----SIAIDVASALEYLHHH  116 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------~~~~----~i~~~v~~~l~yLh~~  116 (268)
                      ++|+..+.+..|+||.||..+.....+..|.|.=+.                    ...+    ..-.+.+.++.|||+.
T Consensus        83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~lilRnilt~a~npfvvgDc~tllk~~g~lPvdmvla~Eylh~y  162 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQNLILRNILTFAGNPFVVGDCATLLKNIGPLPVDMVLAVEYLHSY  162 (1205)
T ss_pred             cccceeEeeccCCCCceeeeeccccccchhhcccccchhhhccccccCCcceechhhhhcccCCCCcchhhHHhHhhccC
Confidence            678888999999999999998877778888751110                    0011    1122346789999998


Q ss_pred             CCCCeeecCCCCCccccCCCCceee-------------------------------------------eeccCCCcCccc
Q 044875          117 SEKPIVHCDSKPSNILLDNDMTTHV-------------------------------------------EYGMGNQFSTNG  153 (268)
Q Consensus       117 ~~~~i~h~dlk~~nill~~~~~~~i-------------------------------------------e~~~~~~~~~~~  153 (268)
                      +   |+|||+||.|.++..-+..|.                                           ++..-..|+..+
T Consensus       163 g---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpv  239 (1205)
T KOG0606|consen  163 G---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPV  239 (1205)
T ss_pred             C---eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCc
Confidence            8   999999999999987766666                                           222234588999


Q ss_pred             cEeechHHHHHHHhCCCCCCccccc
Q 044875          154 DVYSYGKLLLEIFTGKRSTSDMFTE  178 (268)
Q Consensus       154 Dv~s~G~vl~el~tg~~p~~~~~~~  178 (268)
                      |-|++|+++||.+-|+-||+...++
T Consensus       240 dwwamGiIlyeFLVgcvpffGdtpe  264 (1205)
T KOG0606|consen  240 DWWAMGIILYEFLVGCVPFFGDTPE  264 (1205)
T ss_pred             cHHHHHHHHHHHheeeeeccCCCHH
Confidence            9999999999999999999975443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.08  E-value=6.1e-10  Score=87.79  Aligned_cols=92  Identities=21%  Similarity=0.189  Sum_probs=70.5

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      ++......+...+.||+|+||.||++... +|+.+|||.+..                                      
T Consensus         9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   87 (198)
T cd05144           9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL   87 (198)
T ss_pred             HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence            33343334667788999999999999986 789999994210                                      


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .....++.+++.++.++|+.+   ++|+|++|+||+++.+...
T Consensus        88 ~~l~~~~i~v~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~~~~  164 (198)
T cd05144          88 KALYEEGFPVPKPIDWNRHAVVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDDEKI  164 (198)
T ss_pred             HHHHHcCCCCCceeecCCceEEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCCCcE
Confidence                                                 112347788999999999988   9999999999999987776


Q ss_pred             ee-eeccCCCcC
Q 044875          140 HV-EYGMGNQFS  150 (268)
Q Consensus       140 ~i-e~~~~~~~~  150 (268)
                      ++ ||+.....+
T Consensus       165 ~liDfg~~~~~~  176 (198)
T cd05144         165 YIIDWPQMVSTD  176 (198)
T ss_pred             EEEECCccccCC
Confidence            65 788764444

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.03  E-value=3e-09  Score=96.33  Aligned_cols=51  Identities=24%  Similarity=0.378  Sum_probs=40.1

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCCCcCcc
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTN  152 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~~~~~  152 (268)
                      ...++.+++.++.|||+.+   ++|||+||+||+++.+....+||+.+......
T Consensus       430 ~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl~~~~~~liDFGla~~~~~~  480 (535)
T PRK09605        430 NPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIVRDDRLYLIDFGLGKYSDLI  480 (535)
T ss_pred             HHHHHHHHHHHHHHHHhCC---CccCCCChHHEEEECCcEEEEeCcccccCCch
Confidence            3567889999999999988   99999999999995444444488887654433

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=98.97  E-value=1.4e-10  Score=100.03  Aligned_cols=63  Identities=37%  Similarity=0.697  Sum_probs=50.7

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec---------------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG---------------------------------  144 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~---------------------------------  144 (268)
                      .+.+..+++.++.|   ++   .+|+|+||.||....+...++ ||+                                 
T Consensus       361 ~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi  434 (516)
T KOG1033|consen  361 MLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQI  434 (516)
T ss_pred             HHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHH
Confidence            46677888888888   55   899999999999877765555 333                                 


Q ss_pred             cCCCcCccccEeechHHHHHHHh
Q 044875          145 MGNQFSTNGDVYSYGKLLLEIFT  167 (268)
Q Consensus       145 ~~~~~~~~~Dv~s~G~vl~el~t  167 (268)
                      .+..|+.++|+||+|++++|+++
T Consensus       435 ~g~~y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  435 RGQQYSEKVDIYALGLILAELLI  457 (516)
T ss_pred             hhhhhhhhcchhhHHHHHHHHHH
Confidence            23568999999999999999987

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.97  E-value=1.6e-09  Score=84.53  Aligned_cols=47  Identities=19%  Similarity=0.219  Sum_probs=36.7

Q ss_pred             hhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCcee-eeeccCCCcC
Q 044875          100 LSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTH-VEYGMGNQFS  150 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~-ie~~~~~~~~  150 (268)
                      ..++.+++.++.++|. .+   ++|+|++|+||+++ +...+ +||+.+....
T Consensus       117 ~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         117 EELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             HHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            4567788889999998 77   99999999999999 55444 3777764443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>smart00090 RIO RIO-like kinase

Probab=98.88  E-value=4.2e-09  Score=85.20  Aligned_cols=88  Identities=16%  Similarity=0.200  Sum_probs=66.6

Q ss_pred             CCCCcCCcccCCCcceEEEEE-ecCCCeEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGI-LDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~-~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ..|...+.||+|+||.||+|. ...+|+.||+|.+..                                           
T Consensus        28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L  107 (237)
T smart00090       28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL  107 (237)
T ss_pred             chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            356778899999999999998 555789999994320                                           


Q ss_pred             ----------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC
Q 044875           97 ----------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND  136 (268)
Q Consensus        97 ----------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~  136 (268)
                                                              .....++.+++.++.|||+.+  .++|+|+||+||+++ +
T Consensus       108 ~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIli~-~  184 (237)
T smart00090      108 YEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNILVH-D  184 (237)
T ss_pred             HhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEEEE-C
Confidence                                                    012478899999999999865  399999999999998 4


Q ss_pred             Cceee-eeccCCCcCc
Q 044875          137 MTTHV-EYGMGNQFST  151 (268)
Q Consensus       137 ~~~~i-e~~~~~~~~~  151 (268)
                      ...++ ||+.+...+.
T Consensus       185 ~~i~LiDFg~a~~~~~  200 (237)
T smart00090      185 GKVVIIDVSQSVELDH  200 (237)
T ss_pred             CCEEEEEChhhhccCC
Confidence            44433 7776554443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.88  E-value=1.6e-08  Score=80.45  Aligned_cols=46  Identities=22%  Similarity=0.453  Sum_probs=37.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCCC
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQ  148 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~  148 (268)
                      ..++.+++.++.++|..+   ++|+|++|.||+++.+....+||+.+..
T Consensus        98 ~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~~~~~~liDf~~a~~  143 (211)
T PRK14879         98 LELSREIGRLVGKLHSAG---IIHGDLTTSNMILSGGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHHhCC---cccCCCCcccEEEECCCEEEEECCcccC
Confidence            478889999999999988   9999999999999843333447776543

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.87  E-value=1.8e-08  Score=79.29  Aligned_cols=46  Identities=26%  Similarity=0.476  Sum_probs=37.4

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCCCc
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQF  149 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~~  149 (268)
                      .++.+++.++.++|..+   ++|+|++|+|++++.+....+||+.+...
T Consensus        94 ~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVRDDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHHHCC---eecCCCCcceEEEECCcEEEEECCCCcCC
Confidence            68899999999999988   99999999999998433334488766543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.78  E-value=4e-08  Score=82.25  Aligned_cols=134  Identities=26%  Similarity=0.354  Sum_probs=85.3

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC-----------------------------
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG-----------------------------  146 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~-----------------------------  146 (268)
                      ....+..+++.++.|+|..+   ++|||+||+|++++... ..++ +|+..                             
T Consensus       102 ~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe  178 (384)
T COG0515         102 EALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPE  178 (384)
T ss_pred             HHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHH
Confidence            45678888999999999988   99999999999999776 2333 33311                             


Q ss_pred             -------CCcCccccEeechHHHHHHHhCCCCCCccccc--ccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHh
Q 044875          147 -------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTE--GLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       147 -------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                             ..++...|+||+|++++++++|..|+......  .........................              
T Consensus       179 ~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------  244 (384)
T COG0515         179 VLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP--------------  244 (384)
T ss_pred             HhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcccc--------------
Confidence                   24567899999999999999999996543221  0111111111111000000000000              


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          218 IKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                            ......+.++...|+..+|..|.+..+....
T Consensus       245 ------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         245 ------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             ------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence                  1223457788888999999999998876643

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.72  E-value=4.8e-08  Score=76.62  Aligned_cols=50  Identities=22%  Similarity=0.305  Sum_probs=40.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCC-CCCccccCCCCceee-eeccCCCcCcc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDS-KPSNILLDNDMTTHV-EYGMGNQFSTN  152 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dl-k~~nill~~~~~~~i-e~~~~~~~~~~  152 (268)
                      ..+..++..++.++|..+   ++|||| ||.||+++.+...++ ||+.+......
T Consensus        94 ~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~  145 (218)
T PRK12274         94 LAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR  145 (218)
T ss_pred             HHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence            456778899999999998   999999 799999988776555 88887654433

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.66  E-value=4.8e-08  Score=80.20  Aligned_cols=73  Identities=23%  Similarity=0.363  Sum_probs=58.0

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee--------------------------------eec
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV--------------------------------EYG  144 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i--------------------------------e~~  144 (268)
                      ....+++.||..||.|||+.. ++++|+++..+.+.+..++..++                                ++|
T Consensus       176 ~~wkkw~tqIlsal~yLhs~~-PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg  254 (458)
T KOG1266|consen  176 KAWKKWCTQILSALSYLHSCD-PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESG  254 (458)
T ss_pred             HHHHHHHHHHHhhhhhhhccC-CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcC
Confidence            455789999999999999986 88999999999888877666665                                233


Q ss_pred             cCCCcCccccEeechHHHHHHHhCCC
Q 044875          145 MGNQFSTNGDVYSYGKLLLEIFTGKR  170 (268)
Q Consensus       145 ~~~~~~~~~Dv~s~G~vl~el~tg~~  170 (268)
                      .....+.++|+|+||+-..|+..++-
T Consensus       255 ~~tn~~~a~dIy~fgmcAlemailEi  280 (458)
T KOG1266|consen  255 TTTNTTGASDIYKFGMCALEMAILEI  280 (458)
T ss_pred             cccccccchhhhhhhHHHHHHHHhee
Confidence            33345678999999999999877653

>PRK10345 hypothetical protein; Provisional

Probab=98.58  E-value=1e-07  Score=75.55  Aligned_cols=31  Identities=32%  Similarity=0.439  Sum_probs=26.6

Q ss_pred             HHHHHHHHH-HHHhhcCCCCeeecCCCCCccccCC
Q 044875          102 IAIDVASAL-EYLHHHSEKPIVHCDSKPSNILLDN  135 (268)
Q Consensus       102 i~~~v~~~l-~yLh~~~~~~i~h~dlk~~nill~~  135 (268)
                      .+.++..++ .|||+++   |+||||||+||+++.
T Consensus       109 ~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~  140 (210)
T PRK10345        109 QLRQLLKKLKRYLLDNR---IVTMELKPQNILCQR  140 (210)
T ss_pred             HHHHHHHHHHHHHHHCC---EeecCCCHHHEEEec
Confidence            356677677 9999998   999999999999974

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.58  E-value=2.9e-08  Score=87.58  Aligned_cols=72  Identities=28%  Similarity=0.388  Sum_probs=58.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------------------CCcCccccEee
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------------------NQFSTNGDVYS  157 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------------------~~~~~~~Dv~s  157 (268)
                      ......++-++.++|..+   +++||+|++||+++.++..+. +|+.+                     +....++|.||
T Consensus       100 ~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymApEI~~gh~~a~D~ws  176 (612)
T KOG0603|consen  100 AFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRAPEIINGHLSAADWWS  176 (612)
T ss_pred             HHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhhhHhhhccCCcccchh
Confidence            344556778999999988   999999999999999986666 33322                     13567899999


Q ss_pred             chHHHHHHHhCCCCCCc
Q 044875          158 YGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       158 ~G~vl~el~tg~~p~~~  174 (268)
                      ||++++|+++|..||..
T Consensus       177 ~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  177 FGVLAFELLTGTLPFGG  193 (612)
T ss_pred             hhhhHHHHhhCCCCCch
Confidence            99999999999999975

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.42  E-value=8.5e-07  Score=78.18  Aligned_cols=48  Identities=23%  Similarity=0.400  Sum_probs=36.3

Q ss_pred             hHHHHHHH-HHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCCcCc
Q 044875          101 SIAIDVAS-ALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFST  151 (268)
Q Consensus       101 ~i~~~v~~-~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~~~  151 (268)
                      .++..++. .+..+|..+   ++|+|++|.||+++.+...++ |||.....+.
T Consensus       260 ~ia~~~~~~~l~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       260 ALAENLARSFLNQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHHHHHHHHHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            35555555 357788877   999999999999988776554 8888876653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.39  E-value=1.4e-06  Score=70.62  Aligned_cols=46  Identities=22%  Similarity=0.325  Sum_probs=36.7

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCCc
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQF  149 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~  149 (268)
                      ..+.+++.++.+||+.+   ++|+|+||.|||++.+...++ ||+.+...
T Consensus       146 ~~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        146 EQWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            34678999999999998   999999999999987654433 77766443

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.28  E-value=1.8e-05  Score=67.65  Aligned_cols=155  Identities=15%  Similarity=0.146  Sum_probs=96.3

Q ss_pred             CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee----eecc-------------------------
Q 044875           95 KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV----EYGM-------------------------  145 (268)
Q Consensus        95 ~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i----e~~~-------------------------  145 (268)
                      .|...++.+++++.+.+-||..+   .+-+|++++|+|+..+....+    +|..                         
T Consensus       115 ~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~  191 (637)
T COG4248         115 AWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLP  191 (637)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccc
Confidence            33667889999999999999998   888999999999987765544    1111                         


Q ss_pred             ---CCCcCccccEeechHHHHHHHh-CCCCCCccccccc--chhh--HhhhhCccchhhhcchhhhcCCCccchhhhHHh
Q 044875          146 ---GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGL--GLHN--FVKMAVPDQISEVLDPLFVAGGEEEGEKTAEEN  217 (268)
Q Consensus       146 ---~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~--~~~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~  217 (268)
                         +-.-+...|-|.+|+++++++. |+.||.+..-...  ...+  .....+    ...-|..- +.... ..      
T Consensus       192 sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f----~ya~~~~~-g~~p~-P~------  259 (637)
T COG4248         192 SFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF----AYASDQRR-GLKPP-PR------  259 (637)
T ss_pred             cccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee----eechhccC-CCCCC-CC------
Confidence               1123567899999999999988 5999986432111  0000  000000    00000000 00000 00      


Q ss_pred             hhhhchHHHHHHHHHHHHHcCCC--CCCCCCChHHHHHHHHHhHHHHhhcc
Q 044875          218 IKKGQIQESLITILKIRVVCSIK--SPQERMDTSDVVNNLQTVKSTLLRCG  266 (268)
Q Consensus       218 ~~~~~~~~~~~~~~~l~~~C~~~--~p~~RPs~~~v~~~L~~l~~~~~~~~  266 (268)
                        .....-.+..+..+..+|+..  +|.-|||.+--+..|.++.+.+..|-
T Consensus       260 --~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~  308 (637)
T COG4248         260 --SIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCT  308 (637)
T ss_pred             --CCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhh
Confidence              000012334466677778875  35689999999999999999988774

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.27  E-value=3.1e-06  Score=62.86  Aligned_cols=83  Identities=18%  Similarity=0.159  Sum_probs=61.2

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .+.+|+|.++.||++...  +..+++|.+..                                                 
T Consensus         3 ~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~   80 (155)
T cd05120           3 IKLLKGGLTNRVYLLGTK--DEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETL   80 (155)
T ss_pred             ceecccccccceEEEEec--CCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence            467899999999999985  36678873321                                                 


Q ss_pred             -----cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCCcC
Q 044875           97 -----CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFS  150 (268)
Q Consensus        97 -----~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~~  150 (268)
                           .....+..+++.+++++|......++|+|++|+|++++.+...++ ||+.....+
T Consensus        81 ~~~~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~  140 (155)
T cd05120          81 DEVSEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGP  140 (155)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCC
Confidence                 123567888999999999864445999999999999987544443 776655433

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.98  E-value=2.3e-05  Score=70.47  Aligned_cols=32  Identities=19%  Similarity=0.212  Sum_probs=27.1

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeec
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF   94 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l   94 (268)
                      .|+. .-||+|++|.||+|++.++|+.||||..
T Consensus       121 ~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~  152 (537)
T PRK04750        121 DFDI-KPLASASIAQVHFARLKDNGREVVVKVL  152 (537)
T ss_pred             hcCh-hhhcCCCccEEEEEEECCCCCEEEEEEe
Confidence            4554 6799999999999999866999999943

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.95  E-value=3.1e-05  Score=59.03  Aligned_cols=92  Identities=16%  Similarity=0.114  Sum_probs=63.3

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      +.++.|.++.||+++..  +..+++|....                                                  
T Consensus         4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~   81 (170)
T cd05151           4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE   81 (170)
T ss_pred             eecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc
Confidence            35788889999998874  66788883211                                                  


Q ss_pred             -cchhhHHHHHHHHHHHHhhcC--CCCeeecCCCCCccccCCCCceeeeeccCCCcCccccEeechHHHH
Q 044875           97 -CTRLSIAIDVASALEYLHHHS--EKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLL  163 (268)
Q Consensus        97 -~~~~~i~~~v~~~l~yLh~~~--~~~i~h~dlk~~nill~~~~~~~ie~~~~~~~~~~~Dv~s~G~vl~  163 (268)
                       ........+++++++.||...  ...++|+|+++.|++++.+....+||+....-....|   ++.++.
T Consensus        82 ~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~~~~~~liDf~~a~~~~~~~D---la~~~~  148 (170)
T cd05151          82 DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLDDGRLWLIDWEYAGMNDPLFD---LANFFS  148 (170)
T ss_pred             cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEECCeEEEEecccccCCChHHH---HHHHHH
Confidence             112346778999999999876  2236999999999999955444558877654443433   454443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.87  E-value=6.4e-06  Score=75.28  Aligned_cols=126  Identities=19%  Similarity=0.211  Sum_probs=82.0

Q ss_pred             chhhHHHHHHHHHHHHh-hcCCCCeeecCCCCCccccCCCC-ceee-eeccC----------------------------
Q 044875           98 TRLSIAIDVASALEYLH-HHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG----------------------------  146 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh-~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~----------------------------  146 (268)
                      ..-....+...++.|+| ..+   +.|+|+||+|.+++... ..+. +|+.+                            
T Consensus       124 ~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~  200 (601)
T KOG0590|consen  124 SASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEH  200 (601)
T ss_pred             chhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCccc
Confidence            34567888999999999 766   99999999999998877 4443 22211                            


Q ss_pred             ----CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhc
Q 044875          147 ----NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQ  222 (268)
Q Consensus       147 ----~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~  222 (268)
                          .......|+||.|+++.-+++|..|++...........|...........+                         
T Consensus       201 ~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  255 (601)
T KOG0590|consen  201 LSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW-------------------------  255 (601)
T ss_pred             ccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcc-------------------------
Confidence                012457899999999999999999998654444433333333211000000                         


Q ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          223 IQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       223 ~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                       .........+...++..+|+.|.+.+++.
T Consensus       256 -~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  256 -NSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             -ccCChhhhhcccccccCCchhcccccccc
Confidence             01112244555557778899998887764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.85  E-value=1.7e-05  Score=70.13  Aligned_cols=108  Identities=29%  Similarity=0.426  Sum_probs=80.6

Q ss_pred             CCCcCCcccC--CCcceEEEEEe--cCCCeEEEEee--------------------------------------------
Q 044875           62 GFSSANIIGA--GSFGSVCKGIL--DPDQTVVSVRD--------------------------------------------   93 (268)
Q Consensus        62 ~f~~~~~lG~--G~fg~Vy~g~~--~~~~~~vavK~--------------------------------------------   93 (268)
                      .|.....+|+  |.+|.||++..  ..++..+|+|.                                            
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf  194 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF  194 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence            4556677999  99999999998  77888889882                                            


Q ss_pred             --------------------cCccchhhHHHHHHH----HHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eecc--
Q 044875           94 --------------------FKPCTRLSIAIDVAS----ALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGM--  145 (268)
Q Consensus        94 --------------------l~~~~~~~i~~~v~~----~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~--  145 (268)
                                          ++.........+..+    |+..+|..+   ++|-|+||.|+....++ ..+. +|+.  
T Consensus       195 iqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~~v~  271 (524)
T KOG0601|consen  195 IQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFGLVS  271 (524)
T ss_pred             eeeccccchhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcceeE
Confidence                                111334556666777    999999988   99999999999998884 2222 1110  


Q ss_pred             -----------------------------CCCcCccccEeechHHHHHHHhCCCCC
Q 044875          146 -----------------------------GNQFSTNGDVYSYGKLLLEIFTGKRST  172 (268)
Q Consensus       146 -----------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~  172 (268)
                                                   .+-++...|+|++|.+..|..++..+.
T Consensus       272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccc
Confidence                                         123577899999999999998876543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.85  E-value=1.9e-05  Score=69.81  Aligned_cols=108  Identities=28%  Similarity=0.452  Sum_probs=81.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEec-CCCeEEEEeec--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILD-PDQTVVSVRDF--------------------------------------------   94 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~l--------------------------------------------   94 (268)
                      +.+|.....||.|.|+.|++.... .++..+++|.+                                            
T Consensus       264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~i  343 (524)
T KOG0601|consen  264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYI  343 (524)
T ss_pred             cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccC
Confidence            457888889999999999987664 67788888822                                            


Q ss_pred             --------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC------
Q 044875           95 --------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG------  146 (268)
Q Consensus        95 --------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~------  146 (268)
                                          ++..++++..+++.++.++|+..   ++|+|++|+||++..+ +..+. +++..      
T Consensus       344 p~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~  420 (524)
T KOG0601|consen  344 PLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS  420 (524)
T ss_pred             chhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccccccccee
Confidence                                22456788889999999999877   9999999999999885 32222 11111      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKR  170 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~  170 (268)
                                          ..+..+.|++|||.-+.|.+++..
T Consensus       421 ~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~  464 (524)
T KOG0601|consen  421 SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSP  464 (524)
T ss_pred             cccccccccccccchhhccccccccccccccccccccccccCcc
Confidence                                224567899999988888887754

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.70  E-value=0.00019  Score=54.93  Aligned_cols=56  Identities=27%  Similarity=0.457  Sum_probs=43.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCcee----eeeccCC----CcCccccEeec
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH----VEYGMGN----QFSTNGDVYSY  158 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~----ie~~~~~----~~~~~~Dv~s~  158 (268)
                      ..++..+-+.+.-||.++   ++|+||..+||++..+....    ++|+++.    +-+..+|.|-|
T Consensus       116 ~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~~~EDKgVDLYVl  179 (229)
T KOG3087|consen  116 AELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSVSRLPEDKGVDLYVL  179 (229)
T ss_pred             HHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhcccCcccccceeeee
Confidence            578888999999999998   99999999999998766544    3777653    33556777744

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.67  E-value=0.00015  Score=56.64  Aligned_cols=47  Identities=17%  Similarity=0.194  Sum_probs=36.7

Q ss_pred             hhHHHHHHHHHHHH-hhcCCCCeeecCCCCCccccCCCCceeeeeccCCCc
Q 044875          100 LSIAIDVASALEYL-HHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yL-h~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~~  149 (268)
                      ..+..++..++..+ |..+   ++|+||++.||++..+....+||+.+-..
T Consensus       127 ~~i~~~i~~~l~~l~H~~g---lVHGDLs~~NIL~~~~~v~iIDF~qav~~  174 (197)
T cd05146         127 KNAYYQVLSMMKQLYKECN---LVHADLSEYNMLWHDGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEECCcEEEEECCCceeC
Confidence            34567888899988 7777   99999999999998665556688766433

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.44  E-value=5.3e-05  Score=68.32  Aligned_cols=69  Identities=29%  Similarity=0.529  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-------------------------------------eecc
Q 044875          103 AIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------------------------------EYGM  145 (268)
Q Consensus       103 ~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-------------------------------------e~~~  145 (268)
                      +.+++.|+.|+|.  ..+++|+++.|++|.++.+..-|+                                     |+..
T Consensus       105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~  182 (700)
T KOG2137|consen  105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL  182 (700)
T ss_pred             hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence            3456689999998  456999999999999987764444                                     3334


Q ss_pred             CCCcCccccEeechHHHHHHHhCCCCCC
Q 044875          146 GNQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       146 ~~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                      ....+.++|+||+|+.++-+..|..+..
T Consensus       183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~  210 (700)
T KOG2137|consen  183 GTTNTPASDVFSLGVLIYTIYNGGKSII  210 (700)
T ss_pred             cccccccccceeeeeEEEEEecCCcchh
Confidence            4456789999999999998886555443

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.17  E-value=0.0012  Score=50.70  Aligned_cols=46  Identities=30%  Similarity=0.522  Sum_probs=41.1

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGN  147 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~  147 (268)
                      ...++..+-.-+.-||..+   ++|+||.++|+++..+...-+|||++.
T Consensus        94 ~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~i~~IDfGLg~  139 (204)
T COG3642          94 RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGRIYFIDFGLGE  139 (204)
T ss_pred             chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCcEEEEECCccc
Confidence            3568888888999999998   999999999999999888888999985

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.80  E-value=0.0079  Score=49.09  Aligned_cols=81  Identities=20%  Similarity=0.184  Sum_probs=59.1

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEe---------------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVR---------------------------------------------------   92 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK---------------------------------------------------   92 (268)
                      .....||.|.=+.||.|..+ .|..+|+|                                                   
T Consensus        94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            45578999999999999998 78899999                                                   


Q ss_pred             -------------------------ecCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCcee-eeeccC
Q 044875           93 -------------------------DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH-VEYGMG  146 (268)
Q Consensus        93 -------------------------~l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~-ie~~~~  146 (268)
                                               +++.+..-.++..|.+-+.-.-..+   ++|+|+.+-||+++.++... +|+-..
T Consensus       173 VP~P~~~nRHaVvMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         173 VPKPIAWNRHAVVMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             CCCccccccceeeeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecCCCEEEEeCccc
Confidence                                     1112333455666666665555666   99999999999999985544 466655


Q ss_pred             CC
Q 044875          147 NQ  148 (268)
Q Consensus       147 ~~  148 (268)
                      -+
T Consensus       250 v~  251 (304)
T COG0478         250 VP  251 (304)
T ss_pred             cc
Confidence            43

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=96.74  E-value=0.0039  Score=56.00  Aligned_cols=25  Identities=24%  Similarity=0.392  Sum_probs=23.0

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEe
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVR   92 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK   92 (268)
                      .-++.++-|.||+|+++ +|+.||||
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVK  155 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVK  155 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEE
Confidence            56899999999999998 69999999

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=96.71  E-value=0.0077  Score=46.87  Aligned_cols=46  Identities=24%  Similarity=0.369  Sum_probs=32.9

Q ss_pred             hhhHHHHHHHHHHH-HhhcCCCCeeecCCCCCccccCCCCceeeeeccCC
Q 044875           99 RLSIAIDVASALEY-LHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGN  147 (268)
Q Consensus        99 ~~~i~~~v~~~l~y-Lh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~  147 (268)
                      ...+..++...+.. +|..+   ++|+|+.+.||+++.+....+||+.+.
T Consensus       108 ~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~~~~iIDf~qav  154 (188)
T PF01163_consen  108 PKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDGKVYIIDFGQAV  154 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETTCEEE--GTTEE
T ss_pred             HHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecceEEEEecCcce
Confidence            45677777775655 56777   999999999999999866666887653

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.26  E-value=0.0048  Score=58.75  Aligned_cols=74  Identities=27%  Similarity=0.352  Sum_probs=55.3

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee---------------------------------------
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------------------------------  141 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i---------------------------------------  141 (268)
                      .....+..+..|||...   +.|+|++|.|.+...++..++                                       
T Consensus       908 s~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l  984 (1205)
T KOG0606|consen  908 SPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQL  984 (1205)
T ss_pred             chhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCcccccccccccccc
Confidence            34456778999999876   899999999999876554433                                       


Q ss_pred             --------------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccc
Q 044875          142 --------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFT  177 (268)
Q Consensus       142 --------------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~  177 (268)
                                          +...+......+|.|++|+.++|.++|.+|+....+
T Consensus       985 ~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tp 1040 (1205)
T KOG0606|consen  985 SADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETP 1040 (1205)
T ss_pred             ccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcch
Confidence                                111112345679999999999999999999976433

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.80  E-value=0.01  Score=47.02  Aligned_cols=39  Identities=38%  Similarity=0.531  Sum_probs=34.9

Q ss_pred             ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC
Q 044875           96 PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM  137 (268)
Q Consensus        96 ~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~  137 (268)
                      ......++.+++..++-||+.+   +.|+|++++|||++.+.
T Consensus       117 ~~~~~~ll~~l~~~i~~lH~~g---i~H~Dl~~~NILv~~~~  155 (206)
T PF06293_consen  117 PSQRRELLRALARLIAKLHDAG---IYHGDLNPSNILVDPDD  155 (206)
T ss_pred             hhhHHHHHHHHHHHHHHHHHCc---CCCCCCCcccEEEeCCC
Confidence            3456788999999999999999   99999999999999875

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=95.54  E-value=0.02  Score=52.08  Aligned_cols=70  Identities=17%  Similarity=0.250  Sum_probs=51.2

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee---eec-----cC----------CCcC----c---
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYG-----MG----------NQFS----T---  151 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i---e~~-----~~----------~~~~----~---  151 (268)
                      ....-.+.+|+.||.|||+.+  .++|+++.-..|.++..+.=++   |+.     ..          ....    .   
T Consensus       104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~  181 (690)
T KOG1243|consen  104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE  181 (690)
T ss_pred             HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc
Confidence            344456678999999998643  3999999999999998876666   221     11          0010    1   


Q ss_pred             -cccEeechHHHHHHHhC
Q 044875          152 -NGDVYSYGKLLLEIFTG  168 (268)
Q Consensus       152 -~~Dv~s~G~vl~el~tg  168 (268)
                       ..|.|-||++++|++.|
T Consensus       182 ~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  182 WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             cchhhhhHHHHHHHHhCc
Confidence             24999999999999998

>PRK09902 hypothetical protein; Provisional

Probab=95.43  E-value=0.06  Score=42.57  Aligned_cols=37  Identities=19%  Similarity=0.164  Sum_probs=32.7

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT  138 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~  138 (268)
                      +..++.+++..++-||+.+   +.|+|+.+.||+++.+..
T Consensus       130 k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~  166 (216)
T PRK09902        130 RQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGK  166 (216)
T ss_pred             HHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCC
Confidence            3588999999999999999   999999999999985543

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=95.39  E-value=0.06  Score=43.52  Aligned_cols=46  Identities=20%  Similarity=0.203  Sum_probs=33.3

Q ss_pred             hhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceeeeeccCC
Q 044875           99 RLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHVEYGMGN  147 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~  147 (268)
                      ...+..++.+.+.-|-. .+   ++|+||..=|||+..+...-||++.+-
T Consensus       168 ~~~~~~~~v~~~~~l~~~a~---LVHgDLSEyNiL~~~~~p~iID~~QaV  214 (268)
T COG1718         168 AEGLYEDVVEYMRRLYKEAG---LVHGDLSEYNILVHDGEPYIIDVSQAV  214 (268)
T ss_pred             HHHHHHHHHHHHHHHHHhcC---cccccchhhheEEECCeEEEEECcccc
Confidence            44556667777766665 44   999999999999996655556777653

>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []

Probab=95.14  E-value=0.046  Score=29.89  Aligned_cols=27  Identities=4%  Similarity=0.178  Sum_probs=12.2

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHh
Q 044875            4 GLKFMILLLSGLVGLVLVMSRLVINRLR   31 (268)
Q Consensus         4 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~   31 (268)
                      ...|+.++++|.+++++ +.+++.++.|
T Consensus         5 ~IaIIv~V~vg~~iiii-~~~~YaCcyk   31 (38)
T PF02439_consen    5 TIAIIVAVVVGMAIIII-CMFYYACCYK   31 (38)
T ss_pred             hhhHHHHHHHHHHHHHH-HHHHHHHHHc
Confidence            34455556555443333 3333333333

This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=95.10  E-value=0.076  Score=41.95  Aligned_cols=33  Identities=15%  Similarity=0.260  Sum_probs=22.4

Q ss_pred             CCeeecCCCCCccccCC--CCc-eeeeeccCCCcCc
Q 044875          119 KPIVHCDSKPSNILLDN--DMT-THVEYGMGNQFST  151 (268)
Q Consensus       119 ~~i~h~dlk~~nill~~--~~~-~~ie~~~~~~~~~  151 (268)
                      ..++|+|+.+.|++++.  +.. ..+|+........
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~  209 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDP  209 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEeccccccCCh
Confidence            44789999999999987  332 3357665543333

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=94.99  E-value=0.02  Score=47.22  Aligned_cols=35  Identities=23%  Similarity=0.234  Sum_probs=31.6

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN  135 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~  135 (268)
                      .+..++.+++..+.-||+.+   ++|+|++++|||++.
T Consensus       139 ~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~  173 (268)
T PRK15123        139 LKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHL  173 (268)
T ss_pred             HHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEec
Confidence            44578889999999999999   999999999999975

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=94.37  E-value=0.51  Score=42.32  Aligned_cols=72  Identities=19%  Similarity=0.235  Sum_probs=56.2

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee------eeccCCC-----cCccccEeechHHHHHH
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------EYGMGNQ-----FSTNGDVYSYGKLLLEI  165 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i------e~~~~~~-----~~~~~Dv~s~G~vl~el  165 (268)
                      ...+.++.|+..||.++|+.+   +.-+-|.+++|+++.+...++      |.....+     --.+-|.=.+|.+++.+
T Consensus       393 ~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~~~~le~~Qq~D~~~lG~ll~aL  469 (655)
T KOG3741|consen  393 EVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQEDPTEPLESQQQNDLRDLGLLLLAL  469 (655)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCCCCcchhHHhhhhHHHHHHHHHHH
Confidence            456788999999999999999   888999999999999876655      3332222     12456777899999999


Q ss_pred             HhCCCC
Q 044875          166 FTGKRS  171 (268)
Q Consensus       166 ~tg~~p  171 (268)
                      .+|...
T Consensus       470 At~~~n  475 (655)
T KOG3741|consen  470 ATGTEN  475 (655)
T ss_pred             hhcccc
Confidence            998643

>PF15102 TMEM154: TMEM154 protein family

Probab=94.10  E-value=0.016  Score=42.26  Aligned_cols=29  Identities=17%  Similarity=0.254  Sum_probs=12.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 044875            5 LKFMILLLSGLVGLVLVMSRLVINRLRKK   33 (268)
Q Consensus         5 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (268)
                      +.|+|+++++++++++++++++++||+|.
T Consensus        59 LmIlIP~VLLvlLLl~vV~lv~~~kRkr~   87 (146)
T PF15102_consen   59 LMILIPLVLLVLLLLSVVCLVIYYKRKRT   87 (146)
T ss_pred             EEEeHHHHHHHHHHHHHHHheeEEeeccc
Confidence            34555544444434444444444433333

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=93.95  E-value=0.095  Score=37.42  Aligned_cols=10  Identities=10%  Similarity=0.577  Sum_probs=4.3

Q ss_pred             hhhHHHHHHH
Q 044875            7 FMILLLSGLV   16 (268)
Q Consensus         7 i~~~~~~~~~   16 (268)
                      |++++.+|++
T Consensus        69 Ii~gv~aGvI   78 (122)
T PF01102_consen   69 IIFGVMAGVI   78 (122)
T ss_dssp             HHHHHHHHHH
T ss_pred             hhHHHHHHHH
Confidence            3444444443

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]

Probab=93.74  E-value=0.0065  Score=33.80  Aligned_cols=25  Identities=4%  Similarity=0.214  Sum_probs=12.2

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHH
Q 044875            3 EGLKFMILLLSGLVGLVLVMSRLVI   27 (268)
Q Consensus         3 ~~~~i~~~~~~~~~~~~~~~~~~~~   27 (268)
                      +...|..++++.+++++++++++++
T Consensus         9 ~~vaIa~~VvVPV~vI~~vl~~~l~   33 (40)
T PF08693_consen    9 NTVAIAVGVVVPVGVIIIVLGAFLF   33 (40)
T ss_pred             ceEEEEEEEEechHHHHHHHHHHhh
Confidence            3445555555554444444444444

This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=92.82  E-value=0.49  Score=42.86  Aligned_cols=45  Identities=24%  Similarity=0.319  Sum_probs=32.7

Q ss_pred             ccccccCHHHHHHHh------------CCCCcCCcccCCCcceEEEEEecCCCeEEEEe
Q 044875           46 DLLLNISYESLLKAT------------GGFSSANIIGAGSFGSVCKGILDPDQTVVSVR   92 (268)
Q Consensus        46 ~~~~~~~~~~l~~~~------------~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK   92 (268)
                      +..+.++++|+.+.-            ..|+ ..-||..+.|.||+|+++ +|+.||||
T Consensus       135 D~~Pp~~~ee~~~i~e~ElG~~ie~if~~f~-~~piaaASlaQVhrA~L~-~G~~VaVK  191 (538)
T KOG1235|consen  135 DQAPPFPWEEAFKIFEEELGAPIEDIFSEFD-EEPIAAASLAQVHRARLK-NGEDVAVK  191 (538)
T ss_pred             ccCCCCCHHHHHHHHHHHhCCCHHHHHHhcC-cchhhhcchhheEEEEec-CCCEEEEE
Confidence            345556776665431            2232 356899999999999999 59999999

>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane

Probab=92.53  E-value=0.16  Score=36.26  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=18.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 044875            7 FMILLLSGLVGLVLVMSRLVINRLRKKRTL   36 (268)
Q Consensus         7 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   36 (268)
                      .++++++|+++.++++++++.++.||++++
T Consensus        65 ~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk   94 (122)
T PF01102_consen   65 AIIGIIFGVMAGVIGIILLISYCIRRLRKK   94 (122)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred             ceeehhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            457778888877777666655555444444

Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=92.52  E-value=0.19  Score=40.07  Aligned_cols=43  Identities=26%  Similarity=0.427  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccCC
Q 044875          102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGN  147 (268)
Q Consensus       102 i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~  147 (268)
                      +...+.+++.-+|..+   +.|+|..|+|+++..+....+|+....
T Consensus       140 ~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~i~iID~~~k~  182 (229)
T PF06176_consen  140 LAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNGIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCcEEEEECcccc
Confidence            4456888999999999   999999999999998887777776554

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []

Probab=92.24  E-value=0.074  Score=38.06  Aligned_cols=40  Identities=23%  Similarity=0.308  Sum_probs=30.9

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCccchhhHHHHH
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDV  106 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~~~~~~i~~~v  106 (268)
                      ..-||.|+.|.||+|++. +|+.||||...+.-...+..++
T Consensus        16 ~~PlasASiaQVh~a~l~-~g~~VaVKV~rP~i~~~i~~Dl   55 (119)
T PF03109_consen   16 PEPLASASIAQVHRARLK-DGEEVAVKVQRPGIEEQIEADL   55 (119)
T ss_pred             cchhhheehhhheeeeec-ccchhhhhhcchHHHHHHHHHH
Confidence            356999999999999998 5999999987665444444443

These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.

>PF15050 SCIMP: SCIMP protein

Probab=91.56  E-value=0.36  Score=33.81  Aligned_cols=30  Identities=17%  Similarity=0.216  Sum_probs=20.1

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 044875            5 LKFMILLLSGLVGLVLVMSRLVINRLRKKR   34 (268)
Q Consensus         5 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   34 (268)
                      +.|++++++.++.+.+.+++++++|+..+.
T Consensus         8 FWiiLAVaII~vS~~lglIlyCvcR~~lRq   37 (133)
T PF15050_consen    8 FWIILAVAIILVSVVLGLILYCVCRWQLRQ   37 (133)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            456777777777777777777766665443

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=89.24  E-value=1.9  Score=33.99  Aligned_cols=31  Identities=23%  Similarity=0.335  Sum_probs=28.0

Q ss_pred             CCCCcCCcccCCCc-ceEEEEEecCCCeEEEEee
Q 044875           61 GGFSSANIIGAGSF-GSVCKGILDPDQTVVSVRD   93 (268)
Q Consensus        61 ~~f~~~~~lG~G~f-g~Vy~g~~~~~~~~vavK~   93 (268)
                      .+++..+.||+|.- |.|||...  +|..+|+|.
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKl   68 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKL   68 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEE
Confidence            67888889999999 99999999  588999995

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=89.21  E-value=0.83  Score=35.53  Aligned_cols=48  Identities=25%  Similarity=0.270  Sum_probs=41.6

Q ss_pred             cCccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           94 FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        94 l~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                      -+|..+.+++.++.+.+.+|++.....+.-.|++++|+.++.++..++
T Consensus        56 ~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~  103 (188)
T PF12260_consen   56 SPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKL  103 (188)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEE
Confidence            467889999999999999999865555888999999999998877776

Proteins in this uncharacterised family are described as transmembrane proteins.

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=88.95  E-value=1.1  Score=34.47  Aligned_cols=25  Identities=16%  Similarity=0.202  Sum_probs=21.2

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEe
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVR   92 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK   92 (268)
                      ...||+|.+|.||+|.+.  +..+|+|
T Consensus        27 ~~~L~KG~~s~Vyl~~~~--~~~~a~K   51 (201)
T COG2112          27 EKELAKGTTSVVYLGEWR--GGEVALK   51 (201)
T ss_pred             hhhhhcccccEEEEeecc--CceEEEE
Confidence            366999999999999994  5678888

>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]

Probab=87.80  E-value=0.14  Score=47.88  Aligned_cols=31  Identities=23%  Similarity=0.338  Sum_probs=23.2

Q ss_pred             CHHHHHHHhCCCCcCCcccCCCcceEEEEEec
Q 044875           52 SYESLLKATGGFSSANIIGAGSFGSVCKGILD   83 (268)
Q Consensus        52 ~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~   83 (268)
                      .-+|++...+ ....+.||+|+||.||.|...
T Consensus       986 v~deWe~~r~-it~~relg~gsfg~Vy~g~~n 1016 (1025)
T KOG4258|consen  986 VPDEWEVSRE-ITLGRELGQGSFGMVYEGNAN 1016 (1025)
T ss_pred             ChhHHHHHHH-HhhhhhhccCccceEEEecCC
Confidence            3455655544 566788999999999999764

>PF14575 EphA2_TM: Ephrin type-A receptor 2 transmembrane domain; PDB: 3KUL_A 2XVD_A 2VX1_A 2VWV_A 2VX0_A 2VWY_A 2VWZ_A 2VWW_A 2VWU_A 2VWX_A

Probab=86.84  E-value=0.23  Score=32.29  Aligned_cols=14  Identities=29%  Similarity=0.385  Sum_probs=8.2

Q ss_pred             cCHHHHHHHhCCCC
Q 044875           51 ISYESLLKATGGFS   64 (268)
Q Consensus        51 ~~~~~l~~~~~~f~   64 (268)
                      .+|+|...|-..|.
T Consensus        57 ~TYEDP~qAV~eFA   70 (75)
T PF14575_consen   57 HTYEDPNQAVREFA   70 (75)
T ss_dssp             GGSSSHHHHHHHCS
T ss_pred             ccccCHHHHHHHHH
Confidence            35666666655554

...

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=86.67  E-value=0.9  Score=33.03  Aligned_cols=23  Identities=4%  Similarity=0.187  Sum_probs=14.2

Q ss_pred             HHHHHHHHHHHHHHHHhhccccC
Q 044875           15 LVGLVLVMSRLVINRLRKKRTLT   37 (268)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~   37 (268)
                      +++++++++++++++.+|+++.+
T Consensus         7 iii~~i~l~~~~~~~~~rRR~r~   29 (130)
T PF12273_consen    7 IIIVAILLFLFLFYCHNRRRRRR   29 (130)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhc
Confidence            34445555556667777777765

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

>PF08374 Protocadherin: Protocadherin; InterPro: IPR013585 The structure of protocadherins is similar to that of classic cadherins (IPR002126 from INTERPRO), but they also have some unique features associated with the cytoplasmic domains

Probab=86.26  E-value=0.45  Score=37.18  Aligned_cols=29  Identities=28%  Similarity=0.521  Sum_probs=19.1

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 044875            4 GLKFMILLLSGLVGLVLVMSRLVINRLRK   32 (268)
Q Consensus         4 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~   32 (268)
                      -+.|++++++|+++++++|++..+.|++|
T Consensus        36 ~~~I~iaiVAG~~tVILVI~i~v~vR~CR   64 (221)
T PF08374_consen   36 YVKIMIAIVAGIMTVILVIFIVVLVRYCR   64 (221)
T ss_pred             ceeeeeeeecchhhhHHHHHHHHHHHHHh
Confidence            45677888777777777666666555333

They are expressed in a variety of organisms and are found in high concentrations in the brain where they seem to be localised mainly at cell-cell contact sites. Their expression seems to be developmentally regulated [].

>PF05454 DAG1: Dystroglycan (Dystrophin-associated glycoprotein 1); InterPro: IPR008465 Dystroglycan is one of the dystrophin-associated glycoproteins, which is encoded by a 5

Probab=86.26  E-value=0.22  Score=41.26  Aligned_cols=28  Identities=14%  Similarity=0.222  Sum_probs=0.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 044875            6 KFMILLLSGLVGLVLVMSRLVINRLRKK   33 (268)
Q Consensus         6 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (268)
                      .++.+++++++++++.+++++++||||+
T Consensus       148 T~IpaVVI~~iLLIA~iIa~icyrrkR~  175 (290)
T PF05454_consen  148 TFIPAVVIAAILLIAGIIACICYRRKRK  175 (290)
T ss_dssp             ----------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence            3445555555555555555555554443

5 kb transcript in Homo sapiens. The protein product is cleaved into two non-covalently associated subunits, [alpha] (N-terminal) and [beta] (C-terminal). In skeletal muscle the dystroglycan complex works as a transmembrane linkage between the extracellular matrix and the cytoskeleton [alpha]-dystroglycan is extracellular and binds to merosin ([alpha]-2 laminin) in the basement membrane, while [beta]-dystroglycan is a transmembrane protein and binds to dystrophin, which is a large rod-like cytoskeletal protein, absent in Duchenne muscular dystrophy patients. Dystrophin binds to intracellular actin cables. In this way, the dystroglycan complex, which links the extracellular matrix to the intracellular actin cables, is thought to provide structural integrity in muscle tissues. The dystroglycan complex is also known to serve as an agrin receptor in muscle, where it may regulate agrin-induced acetylcholine receptor clustering at the neuromuscular junction. There is also evidence which suggests the function of dystroglycan as a part of the signal transduction pathway because it is shown that Grb2, a mediator of the Ras-related signal pathway, can interact with the cytoplasmic domain of dystroglycan. In general, aberrant expression of dystrophin-associated protein complex underlies the pathogenesis of Duchenne muscular dystrophy, Becker muscular dystrophy and severe childhood autosomal recessive muscular dystrophy. Interestingly, no genetic disease has been described for either [alpha]- or [beta]-dystroglycan. Dystroglycan is widely distributed in non-muscle tissues as well as in muscle tissues. During epithelial morphogenesis of kidney, the dystroglycan complex is shown to act as a receptor for the basement membrane. Dystroglycan expression in Mus musculus brain and neural retina has also been reported. However, the physiological role of dystroglycan in non-muscle tissues has remained unclear [].; PDB: 1EG4_P.

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=85.43  E-value=1.6  Score=38.26  Aligned_cols=18  Identities=39%  Similarity=0.661  Sum_probs=15.2

Q ss_pred             eeecCCCCCccccCCCCc
Q 044875          121 IVHCDSKPSNILLDNDMT  138 (268)
Q Consensus       121 i~h~dlk~~nill~~~~~  138 (268)
                      ++|.|+.|.||++....+
T Consensus       366 FvHaDlHPGNVlirf~~t  383 (565)
T KOG1236|consen  366 FVHADLHPGNVLIRFNKT  383 (565)
T ss_pred             ceecccCCCcEEEEecCC
Confidence            899999999999865443

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=83.60  E-value=0.45  Score=42.78  Aligned_cols=83  Identities=20%  Similarity=0.184  Sum_probs=44.7

Q ss_pred             cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      .+.|+||||+|.++.|+.-|..-+....... .+.........+       ..+        .....+.   ....++.+
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~-~l~~i~k~~~~d-------~~~--------~~~a~e~---~~~~~~d~  168 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESE-YLEILLKYYTDD-------QEL--------LSTAMEH---LIQLLADK  168 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHH-HHHHHHHhccCc-------hhH--------HHHHHHH---HHHHhhhH
Confidence            3469999999999999988865444221110 000000000000       000        0000001   22236667


Q ss_pred             HHHHHHHHcCCCCCCCCCChHH
Q 044875          229 TILKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~  250 (268)
                      .+..+.+.|.-..|..||...+
T Consensus       169 ~~~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  169 KRLPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             hHHHHhccCCccccccccchhH
Confidence            7888888999999988875444

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=83.53  E-value=5.4  Score=34.52  Aligned_cols=47  Identities=15%  Similarity=0.265  Sum_probs=31.2

Q ss_pred             CCCeeecCCCCCccccCCCCceeeeeccCCCcCccccEeechHHHHHHHh
Q 044875          118 EKPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGDVYSYGKLLLEIFT  167 (268)
Q Consensus       118 ~~~i~h~dlk~~nill~~~~~~~ie~~~~~~~~~~~Dv~s~G~vl~el~t  167 (268)
                      ...++|+|+.+.||+++.+....+|+..+..-...-|   +|.++..++.
T Consensus       191 ~~~llHGDl~~gNi~~~~~~~~~iD~e~~~~G~~~~D---lg~~ianL~l  237 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHETKVIDPEFAFYGPIGFD---IGQFIANLFL  237 (370)
T ss_pred             cceeeeccCCcccEEEcCCCCEEEcCcccccCchHhh---HHHHHHHHHH
Confidence            3458999999999999887766666554433333344   4666665543

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>PF01034 Syndecan: Syndecan domain; InterPro: IPR001050 The syndecans are transmembrane proteoglycans which are involved in the organisation of cytoskeleton and/or actin microfilaments, and have important roles as cell surface receptors during cell-cell and/or cell-matrix interactions [, ]

Probab=82.99  E-value=0.34  Score=30.02  Aligned_cols=15  Identities=33%  Similarity=0.561  Sum_probs=0.5

Q ss_pred             HHHHHHHHHHhhccc
Q 044875           21 VMSRLVINRLRKKRT   35 (268)
Q Consensus        21 ~~~~~~~~~~~~~~~   35 (268)
                      ++++++++|.|++.+
T Consensus        27 lLIlf~iyR~rkkdE   41 (64)
T PF01034_consen   27 LLILFLIYRMRKKDE   41 (64)
T ss_dssp             ----------S----
T ss_pred             HHHHHHHHHHHhcCC
Confidence            333445555555443

Structurally, these proteins consist of four separate domains: A signal sequence; An extracellular domain (ectodomain) of variable length whose sequence is not evolutionary conserved in the various forms of syndecans. The ectodomain contains the sites of attachment of the heparan sulphate glycosaminoglycan side chains; A transmembrane region; A highly conserved cytoplasmic domain of about 30 to 35 residues, which could interact with cytoskeletal proteins. The proteins known to belong to this family are: Syndecan 1. Syndecan 2 or fibroglycan. Syndecan 3 or neuroglycan or N-syndecan. Syndecan 4 or amphiglycan or ryudocan. Drosophila syndecan. Caenorhabditis elegans probable syndecan (F57C7.3). Syndecan-4, a transmembrane heparan sulphate proteoglycan, is a coreceptor with integrins in cell adhesion. It has been suggested to form a ternary signalling complex with protein kinase Calpha and phosphatidylinositol 4,5-bisphosphate (PIP2). Structural studies have demonstrated that the cytoplasmic domain undergoes a conformational transition and forms a symmetric dimer in the presence of phospholipid activator PIP2, and whose overall structure in solution exhibits a twisted clamp shape having a cavity in the centre of dimeric interface. In addition, it has been observed that the syndecan-4 variable domain interacts, strongly, not only with fatty acyl groups but also the anionic head group of PIP2. These findings indicate that PIP2 promotes oligomerisation of the syndecan-4 cytoplasmic domain for transmembrane signalling and cell-matrix adhesion [, ].; GO: 0008092 cytoskeletal protein binding, 0016020 membrane; PDB: 1EJQ_B 1EJP_B 1YBO_C 1OBY_Q.

>PF15069 FAM163: FAM163 family

Probab=80.99  E-value=3  Score=30.44  Aligned_cols=29  Identities=21%  Similarity=0.193  Sum_probs=16.3

Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 044875            1 MSEGLKFMILLLSGLVGLVLVMSRLVINR   29 (268)
Q Consensus         1 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~   29 (268)
                      |+-+-++|.+.+.+.|+++.+++.++.+|
T Consensus         1 MtaGTvVItGgILAtVILLcIIaVLCYCR   29 (143)
T PF15069_consen    1 MTAGTVVITGGILATVILLCIIAVLCYCR   29 (143)
T ss_pred             CCceeEEEechHHHHHHHHHHHHHHHHHh
Confidence            45555555555555565665555555544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	268
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		2e-08
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		2e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-06
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-05
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		4e-05
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		2e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		2e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-04
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		3e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		8e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		8e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT----------------HV- 141
           R  IA+  A  L YLH H +  I+H D K +NILLD +                   HV 
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 192
Query: 142 ------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA 189
                       EY    + S   DV+ YG +LLE+ TG+R+            +  ++A
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA-----------FDLARLA 241
Query: 190 VPDQISEVLDPLFVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTS 249
             D +  +LD +               +++     E +  ++++ ++C+  SP ER   S
Sbjct: 242 NDDDVM-LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 300
Query: 250 DVVNNLQ 256
           +VV  L+
Sbjct: 301 EVVRMLE 307

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 41/187 (21%)
Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT----------------HV- 141
           R  IA+  A  L YLH H +  I+H D K +NILLD +                   HV 
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVX 200
Query: 142 ------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA 189
                       EY    + S   DV+ YG +LLE+ TG+R+            +  ++A
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA-----------FDLARLA 249
Query: 190 VPDQISEVLDPLFVXXXXXXXXXXXXXNIKKGQIQESLITILKIRVVCSIKSPQERMDTS 249
             D +  +LD +               +++     E +  ++++ ++C+  SP ER   S
Sbjct: 250 NDDDVM-LLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMS 308
Query: 250 DVVNNLQ 256
           +VV  L+
Sbjct: 309 EVVRMLE 315

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 34/120 (28%)
Query: 84  PDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNIL---------LD 134
           P   V+S +   P   ++ A+ +A  + YLH  +  PI+H D K SNIL         L 
Sbjct: 92  PLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLS 151
Query: 135 NDMTTHVEYGMGNQ-------------------------FSTNGDVYSYGKLLLEIFTGK 169
           N +    ++G+  +                         FS   DV+SYG LL E+ TG+
Sbjct: 152 NKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+  G + ++      
Sbjct: 123 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPY 179
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+  G + ++      
Sbjct: 120 IVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPY 176
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 130 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 170

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 130 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 170

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 109 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 149

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 108 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 148

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 110 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 150

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 131 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 171

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 134 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 174

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 131 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 171

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 115 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 155

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 134 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 174

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 133 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 173

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 136 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 176

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 111 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 151

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 131 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 171

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 138 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 178

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 97  CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           CTR   A ++ SALEYLH    K I+H D KP NILL+ DM   +
Sbjct: 131 CTRFYTA-EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQI 171

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 29/105 (27%)
Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----GNQF---- 149
           RLS+A DVA  + YLH+ +  PIVH D K  N+L+D   T  V ++G+     + F    
Sbjct: 139 RLSMAYDVAKGMNYLHNRN-PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSK 197
Query: 150 -------------------STNGDVYSYGKLLLEIFTGKRSTSDM 175
                              +   DVYS+G +L E+ T ++   ++
Sbjct: 198 XAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL 242

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 123 IVSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPY 179
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPY 178
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 122 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 178
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 179 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGDVYSY----GK 160
           + SA++Y H   +K IVH D K  N+LLD DM   + ++G  N+F+    + ++      
Sbjct: 115 IVSAVQYCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPY 171
Query: 161 LLLEIFTGKRSTS---DMFTEGLGLHNFVKMAVP 191
              E+F GK+      D+++ G+ L+  V  ++P
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	268
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-25
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-09
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-22
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	9e-22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	7e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	8e-18
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-15
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	9e-15
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-14
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-14
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	9e-13
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-12
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-12
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	7e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-10
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-09
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	7e-09
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-08
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-08
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	3e-08
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	3e-08
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	5e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-08
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-07
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-07
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	7e-07
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	1e-06
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-06
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-06
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	3e-06
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-06
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-06
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	3e-06
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-06
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	4e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-06
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-06
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	8e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-06
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	9e-06
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-05
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-05
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-05
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-05
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-05
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-05
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-05
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-05
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-05
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	2e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-05
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	3e-05
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	3e-05
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	4e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	4e-05
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	4e-05
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	4e-05
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-05
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	5e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	5e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	5e-05
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	6e-05
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	6e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	6e-05
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-05
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-05
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	7e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	7e-05
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	7e-05
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	7e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	8e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	8e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	8e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	8e-05
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	8e-05
3aln_A	327	Dual specificity mitogen-activated protein kinase;	9e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-05
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	9e-05
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	1e-04
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-04
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-04
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	1e-04
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	1e-04
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-04
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	1e-04
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	1e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-04
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-04
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-04
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-04
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-04
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-04
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-04
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-04
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	2e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-04
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-04
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-04
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-04
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	2e-04
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-04
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-04
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-04
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	3e-04
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	3e-04
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-04
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	3e-04
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-04
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	4e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-04
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	4e-04
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-04
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	4e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-04
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-04
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	4e-04
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-04
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	6e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	6e-04
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	6e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	6e-04
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	6e-04
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	6e-04
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	6e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-04
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	7e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	7e-04
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	8e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	8e-04
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-04
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	9e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-04
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  100 bits (252), Expect = 4e-25
 Identities = 44/188 (23%), Positives = 72/188 (38%), Gaps = 49/188 (26%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT----------------THV 141
            R  IA+  A  L YLH H +  I+H D K +NILLD +                  THV
Sbjct: 132 KRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 191

Query: 142 -------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM 188
                        EY    + S   DV+ YG +LLE+ TG+R+              +  
Sbjct: 192 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251

Query: 189 AVP----DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE 244
                   ++  ++D                 +++     E +  ++++ ++C+  SP E
Sbjct: 252 VKGLLKEKKLEALVDV----------------DLQGNYKDEEVEQLIQVALLCTQSSPME 295

Query: 245 RMDTSDVV 252
           R   S+VV
Sbjct: 296 RPKMSEVV 303

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 54.9 bits (133), Expect = 6e-09
 Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 52 SYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSV 91
          S   L  A+  FS+ NI+G G FG V KG L  D T+V+V
Sbjct: 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAV 59

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 92.7 bits (231), Expect = 4e-22
 Identities = 46/194 (23%), Positives = 70/194 (36%), Gaps = 57/194 (29%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-----------------TH 140
            RL I I  A  L YLH    + I+H D K  NILLD +                   TH
Sbjct: 140 QRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTH 196

Query: 141 V-------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK 187
           +             EY +  + +   DVYS+G +L E+   + +     +    + N  +
Sbjct: 197 LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQ--SLPREMVNLAE 254

Query: 188 MAVP----DQISEVLDPLFVAGGEEEGEKTAEENIKKGQI-QESLITILKIRVVCSIKSP 242
            AV      Q+ +++DP                     +I  ESL       V C   S 
Sbjct: 255 WAVESHNNGQLEQIVDPNL-----------------ADKIRPESLRKFGDTAVKCLALSS 297

Query: 243 QERMDTSDVVNNLQ 256
           ++R    DV+  L+
Sbjct: 298 EDRPSMGDVLWKLE 311

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 50.7 bits (122), Expect = 1e-07
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 37 TGSQSSSRKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSV 91
            S S         +    L +AT  F    +IG G FG V KG+L  D   V++
Sbjct: 15 ALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVAL 68

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 91.1 bits (227), Expect = 9e-22
 Identities = 37/199 (18%), Positives = 63/199 (31%), Gaps = 60/199 (30%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-----------------TH 140
            R  IA   A+ + +LH   E   +H D K +NILLD   T                 T 
Sbjct: 134 MRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190

Query: 141 V-------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK 187
           +             E  +  + +   D+YS+G +LLEI TG  +  +           + 
Sbjct: 191 MTSRIVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLPAVDEHREP----QLLLD 245

Query: 188 MAVP-----DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSP 242
           +          I + +D                          S+  +  +   C  +  
Sbjct: 246 IKEEIEDEEKTIEDYIDKKM-----------------NDADSTSVEAMYSVASQCLHEKK 288

Query: 243 QERMDTSDVVNNLQTVKST 261
            +R D   V   LQ + ++
Sbjct: 289 NKRPDIKKVQQLLQEMTAS 307

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 14/67 (20%)

Query: 48  LLNISYESLLKATGGFSS------ANIIGAGSFGSVCKGILDPDQTVVSVRDFKPCTRLS 101
             + S+  L   T  F         N +G G FG V KG +  + T V+V       +L+
Sbjct: 12  FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAV------KKLA 63

Query: 102 IAIDVAS 108
             +D+ +
Sbjct: 64  AMVDITT 70

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 80.5 bits (199), Expect = 8e-18
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 26/104 (25%)

Query: 93  DFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---------------- 136
            +     +S  +  +  + YLH    K ++H D KP N+LL                   
Sbjct: 98  YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157

Query: 137 --MTTHV--------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
             MT +         E   G+ +S   DV+S+G +L E+ T ++
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 73.8 bits (182), Expect = 1e-15
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 34/112 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGM------ 145
           +   P   ++ A+ +A  + YLH  +  PI+H D K SNIL+   +              
Sbjct: 100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159

Query: 146 ----------------------------GNQFSTNGDVYSYGKLLLEIFTGK 169
                                        + FS   DV+SYG LL E+ TG+
Sbjct: 160 FGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 71.1 bits (175), Expect = 9e-15
 Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 27/110 (24%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
                   +  A+D+A  + +LH   E  I        ++++D DMT  +          
Sbjct: 106 FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164

Query: 142 -EYGMG---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM 175
               M                +    + D++S+  LL E+ T +   +D+
Sbjct: 165 SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL 214

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 71.2 bits (175), Expect = 1e-14
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 29/106 (27%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------T 139
                  RLS+A DVA  + YLH+ +  PIVH + K  N+L+D   T             
Sbjct: 132 EQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190

Query: 140 HVEYGM----------------GNQFSTNGDVYSYGKLLLEIFTGK 169
                                     +   DVYS+G +L E+ T +
Sbjct: 191 STFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQ 236

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 70.4 bits (173), Expect = 2e-14
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 33/111 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD----------------- 134
              K   +L + +D+A  +EY+ + +  PIVH D +  NI L                  
Sbjct: 117 HPIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGL 175

Query: 135 -----NDMTTHV--------E--YGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                + ++  +        E        ++   D YS+  +L  I TG+ 
Sbjct: 176 SQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG 226

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 65.8 bits (161), Expect = 9e-13
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 36/109 (33%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F+    + IA   A  ++YLH    K I+H D K +NI L  D T  +            
Sbjct: 117 FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                     N +S   DVY++G +L E+ TG+
Sbjct: 174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 24/123 (19%), Positives = 36/123 (29%), Gaps = 42/123 (34%)

Query: 98  TRLSIAIDVASALEYLHHH-------SEKPIVHCDSKPSNILLDNDMTTHV--------- 141
               IA  +A  L YLH          +  I H D K  N+LL N++T  +         
Sbjct: 122 ELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF 181

Query: 142 ---------------------EYGMG-----NQFSTNGDVYSYGKLLLEIFTGKRSTSDM 175
                                E   G            D+Y+ G +L E+ +   +    
Sbjct: 182 EAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241

Query: 176 FTE 178
             E
Sbjct: 242 VDE 244

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 65.1 bits (159), Expect = 2e-12
 Identities = 19/119 (15%), Positives = 31/119 (26%), Gaps = 44/119 (36%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--------------- 136
                     IA ++   + YLH    K I+H D K  N+  DN                
Sbjct: 125 IVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGV 181

Query: 137 --------------------------MTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                       +         FS + DV++ G +  E+   +
Sbjct: 182 LQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHARE 240

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 63.1 bits (154), Expect = 7e-12
 Identities = 30/156 (19%), Positives = 45/156 (28%), Gaps = 49/156 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
             +    R+S A D+AS + YLH      I+H D    N L+  +    V          
Sbjct: 103 SQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV 159

Query: 142 --------------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                           E   G  +    DV+S+G +L EI    
Sbjct: 160 DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

Query: 170 RSTSDMF----TEGLGLHNFVKMAVPDQISEVLDPL 201
            +  D        GL +  F+    P        P+
Sbjct: 220 NADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPI 255

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.9 bits (143), Expect = 2e-10
 Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 49/135 (36%)

Query: 90  SVRDF------KPCTRLSIAIDVASALEYLH-----HHSEKPIVHCDSKPSNILLDNDMT 138
           S+ D+         + L I + +AS L +LH        +  I H D K  NIL+  +  
Sbjct: 92  SLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ 151

Query: 139 -----------THVEYGMGNQFSTNG---------------------------DVYSYGK 160
                              +  +                              D++++G 
Sbjct: 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211

Query: 161 LLLEIFTGKRSTSDM 175
           +L E+     S   +
Sbjct: 212 VLWEVARRMVSNGIV 226

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 56.8 bits (137), Expect = 2e-09
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 27/94 (28%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND------------MT-THVEYG-- 144
           ++  +++  AL YLH      +V+ D KP NI+L  +            +      YG  
Sbjct: 185 IAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTP 241

Query: 145 --------MGNQFSTNGDVYSYGKLLLEIFTGKR 170
                        +   D+Y+ G+ L  +     
Sbjct: 242 GFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLP 274

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 23/128 (17%), Positives = 36/128 (28%), Gaps = 49/128 (38%)

Query: 90  SVRDF------KPCTRLSIAIDVASALEYLH-----HHSEKPIVHCDSKPSNILLDNDMT 138
           S+ D+         + L +A    S L +LH        +  I H D K  NIL+  + T
Sbjct: 121 SLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180

Query: 139 ----------THVEYGMGNQFSTNG----------------------------DVYSYGK 160
                       +          N                             D+YS+G 
Sbjct: 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGL 240

Query: 161 LLLEIFTG 168
           +L E+   
Sbjct: 241 ILWEVARR 248

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.8 bits (132), Expect = 6e-09
 Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 6/56 (10%)

Query: 89  VSVRDFKPCTRLSIAIDVASALEYLH------HHSEKPIVHCDSKPSNILLDNDMT 138
           +S+      +   +A  V   L YLH       H +  I H D    N+L+ ND T
Sbjct: 103 LSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGT 158

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 53.6 bits (129), Expect = 1e-08
 Identities = 21/135 (15%), Positives = 36/135 (26%), Gaps = 49/135 (36%)

Query: 90  SVRDF------KPCTRLSIAIDVASALEYLH-----HHSEKPIVHCDSKPSNILLDNDMT 138
           S+ D+           + +A+  AS L +LH        +  I H D K  NIL+  + T
Sbjct: 126 SLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGT 185

Query: 139 THV-----------EYGMGNQFSTNG---------------------------DVYSYGK 160
             +                +    +                            D+Y+ G 
Sbjct: 186 CCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGL 245

Query: 161 LLLEIFTGKRSTSDM 175
           +  EI          
Sbjct: 246 VFWEIARRCSIGGIH 260

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 21/100 (21%), Positives = 33/100 (33%), Gaps = 32/100 (32%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND------------------MTTH- 140
           ++I   + SAL+  H        H D KP NIL+  D                  +T   
Sbjct: 137 VAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLG 193

Query: 141 -----VEY-----GMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                + Y        +  +   D+Y+   +L E  TG  
Sbjct: 194 NTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSP 233

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 52.6 bits (127), Expect = 3e-08
 Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 44/121 (36%)

Query: 79  KGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-- 136
            G L  D              ++    +   +++ H      IVH D KP NIL+D++  
Sbjct: 105 HGPLSVDTA------------INFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKT 149

Query: 137 ----------------MTTH------VEY-----GMGNQFSTNGDVYSYGKLLLEIFTGK 169
                           +T        V+Y       G       D+YS G +L E+  G+
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

Query: 170 R 170
            
Sbjct: 210 P 210

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 52.8 bits (126), Expect = 3e-08
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +      RL + + V   L  LHH+    +VH   +P +I+LD   
Sbjct: 206 KSLVHHARLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRG 248

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 52.0 bits (124), Expect = 5e-08
 Identities = 13/122 (10%), Positives = 26/122 (21%), Gaps = 30/122 (24%)

Query: 75  GSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD 134
             +       D   V   D        +   +      L       +VH    P N+ + 
Sbjct: 172 VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LVHGHFTPDNLFIM 228

Query: 135 ND--------------------MTTHVEY-------GMGNQFSTNGDVYSYGKLLLEIFT 167
            D                     +  V Y            F+   + +  G  +  ++ 
Sbjct: 229 PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC 288

Query: 168 GK 169
             
Sbjct: 289 LF 290

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 51.7 bits (124), Expect = 6e-08
 Identities = 10/79 (12%), Positives = 22/79 (27%), Gaps = 10/79 (12%)

Query: 96  PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----MTTHVEYGMGNQFST 151
           P   +     +A+A +  H      +      PS + +  D    +            + 
Sbjct: 128 PVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAY---PATMPDANP 181

Query: 152 NGDVYSYGKLLLEIFTGKR 170
             D+   G  L  +   + 
Sbjct: 182 QDDIRGIGASLYALLVNRW 200

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 51.1 bits (123), Expect = 8e-08
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 46/123 (37%)

Query: 79  KGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-- 136
           +G + P +             + +  D   AL + H +    I+H D KP+NI++     
Sbjct: 110 EGPMTPKRA------------IEVIADACQALNFSHQNG---IIHRDVKPANIMISATNA 154

Query: 137 ------------------MTTH------VEY-----GMGNQFSTNGDVYSYGKLLLEIFT 167
                             +T         +Y       G+      DVYS G +L E+ T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214

Query: 168 GKR 170
           G+ 
Sbjct: 215 GEP 217

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 51.2 bits (122), Expect = 1e-07
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 99  RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           RL + + V   L  LHH+    +VH   +P +I+LD   
Sbjct: 208 RLQLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRG 243

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 51.2 bits (123), Expect = 1e-07
 Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 33/129 (25%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-----------------MTTHVE 142
                D   AL +LH      +VH D KP+NI L                        V+
Sbjct: 160 WGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ 216

Query: 143 YG---------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ 193
            G         +   + T  DV+S G  +LE+         +   G G     +  +P +
Sbjct: 217 EGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNME----LPHGGEGWQQLRQGYLPPE 272

Query: 194 ISEVLDPLF 202
            +  L    
Sbjct: 273 FTAGLSSEL 281

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 25/101 (24%), Positives = 35/101 (34%), Gaps = 28/101 (27%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--------THVEY 143
                   L  ++DV  A+EYL        VH D    N+L+  D          T    
Sbjct: 284 SVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340

Query: 144 GMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
                                +FST  DV+S+G LL EI++
Sbjct: 341 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 48.0 bits (115), Expect = 1e-06
 Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 33/106 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL------------------ 133
              +  T L +  D A+ +EYL     K  +H D    N L+                  
Sbjct: 208 ARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEA 264

Query: 134 DNDMTTHVEYGM------------GNQFSTNGDVYSYGKLLLEIFT 167
           D                         ++S+  DV+S+G LL E F+
Sbjct: 265 DGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L I      A++++H     PI+H D K  N+LL N  T
Sbjct: 139 LKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGT 176

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 48.2 bits (115), Expect = 1e-06
 Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           ++      L +A  ++SA+EYL    +K  +H +    N L+  +    V          
Sbjct: 313 QEVSAVVLLYMATQISSAMEYL---EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369

Query: 142 --EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
              Y                    N+FS   DV+++G LL EI T
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 47.9 bits (114), Expect = 2e-06
 Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 32/97 (32%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL------------------DNDMTTHV 141
           + +A  +AS + Y+        VH D + +NIL+                  DN+ T   
Sbjct: 366 VDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422

Query: 142 -----------EYGMGNQFSTNGDVYSYGKLLLEIFT 167
                      E  +  +F+   DV+S+G LL E+ T
Sbjct: 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 459

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 46.8 bits (111), Expect = 2e-06
 Identities = 20/98 (20%), Positives = 33/98 (33%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------------ 141
           +  +  VA  +E+L   + +  +H D    NILL       +                  
Sbjct: 196 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252

Query: 142 ------------EYGMGNQFSTNGDVYSYGKLLLEIFT 167
                       E      ++   DV+S+G LL EIF+
Sbjct: 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 32/97 (32%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--------------------- 138
           + +A  +AS + Y+        VH D + +NIL+  ++                      
Sbjct: 283 VDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339

Query: 139 --------THVEYGMGNQFSTNGDVYSYGKLLLEIFT 167
                   T  E  +  +F+   DV+S+G LL E+ T
Sbjct: 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 376

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L + + +   LE +H    K   H D KP+NILL ++  
Sbjct: 137 LWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQ 172

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
            V ++  Y+H+   K I H D KPSNIL+D + 
Sbjct: 159 SVLNSFSYIHNE--KNICHRDVKPSNILMDKNG 189

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 46.6 bits (111), Expect = 3e-06
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 30/96 (31%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------------- 141
             A  +   L+ LH +    I+HCD KP NILL     + +                   
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTYI 260

Query: 142 --------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                   E  +G ++    D++S G +L E+ TG 
Sbjct: 261 QSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 46.6 bits (111), Expect = 4e-06
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL------------------ 133
                   +  +  +A  + ++    ++  +H D + +NIL+                  
Sbjct: 279 SKQPLPKLIDFSAQIAEGMAFI---EQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335

Query: 134 DNDMTTHV-----------EYGMGNQFSTNGDVYSYGKLLLEIFT 167
           DN+ T              E      F+   DV+S+G LL+EI T
Sbjct: 336 DNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 25/115 (21%), Positives = 41/115 (35%), Gaps = 38/115 (33%)

Query: 83  DPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV- 141
           +P     S+        + +A ++A  + YL   +    VH D    N ++  D T  + 
Sbjct: 129 NPVLAPPSLSKM-----IQMAGEIADGMAYL---NANKFVHRDLAARNCMVAEDFTVKIG 180

Query: 142 -----------EY----GMG--------------NQFSTNGDVYSYGKLLLEIFT 167
                      +Y    G G                F+T  DV+S+G +L EI T
Sbjct: 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 46.1 bits (110), Expect = 4e-06
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 6/46 (13%)

Query: 96  PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
            CTR   A ++ SALEYLH      I+H D KP NILL+ DM  H+
Sbjct: 130 TCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNEDM--HI 169

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNGD 154
           D+   +EYLH+     I+H D KPSN+L+  D    + ++G+ N+F  +  
Sbjct: 145 DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 45.0 bits (107), Expect = 8e-06
 Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 27/128 (21%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--------------MTTHVEYGM- 145
           S    +   L++LH  +  PI+H D K  NI +                         + 
Sbjct: 133 SWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVI 191

Query: 146 -----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI 194
                        ++  + DVY++G  +LE+ T +   S+                P   
Sbjct: 192 GTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 251

Query: 195 SEVLDPLF 202
            +V  P  
Sbjct: 252 DKVAIPEV 259

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 45.4 bits (108), Expect = 8e-06
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +  A+  +H H    IVH D KP+N L+ + M
Sbjct: 136 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM 164

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 45.0 bits (107), Expect = 9e-06
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
             + + V   L Y+H  S   +VH D KPSNI +   
Sbjct: 118 KDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRT 151

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 45.4 bits (108), Expect = 9e-06
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +  AL+YL +     I+H D KP NILLD  
Sbjct: 124 LVMALDYLQNQR---IIHRDMKPDNILLDEH 151

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +  A+  +H H    IVH D KP+N L+ + M
Sbjct: 117 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM 145

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 28/96 (29%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------------- 141
             A  + +AL +L    E  I+HCD KP NILL N   + +                   
Sbjct: 161 KFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYI 219

Query: 142 --------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                   E  +G  +    D++S G +L+E+ TG+
Sbjct: 220 QSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
           SA++Y H      IVH D K  N+LLD DM   + ++G  N+F+  G
Sbjct: 125 SAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +  A+  +H H    IVH D KP+N L+ + M
Sbjct: 164 MLEAVHTIHQHG---IVHSDLKPANFLIVDGM 192

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
                   L +A  +A  + ++    E+  +H D + +NIL+ + ++  + ++G+     
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFI---EERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160

Query: 147 ------------------------NQFSTNGDVYSYGKLLLEIFT 167
                                     F+   DV+S+G LL EI T
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 44.1 bits (105), Expect = 2e-05
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
           +  +P   L +  DV   + +L        +H D    N L+D D+   V ++GM     
Sbjct: 99  KGLEPSQLLEMCYDVCEGMAFL---ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL 155

Query: 147 ------------------------NQFSTNGDVYSYGKLLLEIFT 167
                                    ++S+  DV+++G L+ E+F+
Sbjct: 156 DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 44.6 bits (106), Expect = 2e-05
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 30/95 (31%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV----------EY---GMG 146
           L  A DVA  ++YL   S+K  +H D    NIL+  +    +           Y    MG
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201

Query: 147 --------------NQFSTNGDVYSYGKLLLEIFT 167
                         + ++TN DV+SYG LL EI +
Sbjct: 202 RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 10/37 (27%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
               + + SALE++H    + ++H D KP+N+ +   
Sbjct: 139 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITAT 172

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           LS +  VA  + +L   + K  +H D    NILL +   T +              Y + 
Sbjct: 148 LSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+SYG  L E+F+
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 44.0 bits (104), Expect = 2e-05
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 81  ILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +   + +  +++  K    +S+   +AS + +LH      I+H D KP NIL+   
Sbjct: 99  VESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTS 151

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 43.8 bits (104), Expect = 2e-05
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           ++      L +A  ++SA+EYL    +K  +H D    N L+  +    V          
Sbjct: 106 QEVSAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162

Query: 142 --EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
              Y                    N+FS   DV+++G LL EI T
Sbjct: 163 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 44.1 bits (104), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 28/94 (29%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------------THV-- 141
           ++I V   L YL    +  I+H D KPSNIL+++                     + V  
Sbjct: 136 VSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193

Query: 142 ------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                 E   G  +S   D++S G  L+E+  G+
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           +S A  ++  ++YL   +E  +VH D    NIL+       +              Y   
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                            + ++T  DV+S+G LL EI T
Sbjct: 210 SQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 43.4 bits (103), Expect = 3e-05
 Identities = 23/98 (23%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           L  A  VA  +E+L     K  VH D    N+L+ +     +              Y + 
Sbjct: 175 LCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+SYG LL EIF+
Sbjct: 232 GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 43.5 bits (103), Expect = 4e-05
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           +   +D+A  +EYL   S +  +H D    N +L  DMT  V ++G+             
Sbjct: 140 VRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                            N ++ + DV+++G  + EI T
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 43.0 bits (102), Expect = 4e-05
 Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 28/101 (27%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
                   L  ++DV  A+EYL        VH D    N+L+  D    V ++G+     
Sbjct: 112 SVLGGDCLLKFSLDVCEAMEYL---EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 168

Query: 147 --------------------NQFSTNGDVYSYGKLLLEIFT 167
                                +FST  DV+S+G LL EI++
Sbjct: 169 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.9 bits (102), Expect = 4e-05
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           V  ALEYLH      I++ D KP NILLD +
Sbjct: 115 VCLALEYLHSKD---IIYRDLKPENILLDKN 142

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 43.1 bits (102), Expect = 4e-05
 Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           +S A  VA  +EYL   + K  +H D    N+L+  D    + ++G+             
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+S+G LL EIFT
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 21/100 (21%), Positives = 35/100 (35%), Gaps = 33/100 (33%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILL-----------------------DNDM 137
            I+  +   L+Y+H      I+H D KP N+L+                       D   
Sbjct: 135 QISKQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192

Query: 138 TTHV--------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
           T  +        E  +G  +    D++S   L+ E+ TG 
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           L   +D+A  +EYL   S +  +H D    N +L +DMT  V              Y  G
Sbjct: 150 LKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              +++  DV+++G  + EI T
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT 244

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-------------THVEYGMG 146
           L IA  VA+ + YL   SE+  VH D    N L+  +M              +   Y   
Sbjct: 177 LCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD 233

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                            N+++T  DV++YG +L EIF+
Sbjct: 234 GNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 43.0 bits (102), Expect = 5e-05
 Identities = 22/98 (22%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           L  +  VA  + +L   + K  +H D    N+LL N     +              Y + 
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+SYG LL EIF+
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           +S    +A  +EYL   + +  +H D    N+L+  +    +              Y   
Sbjct: 160 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+S+G L+ EIFT
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 42.7 bits (101), Expect = 6e-05
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 36/107 (33%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEY---------G 144
                +L +A  +A+A+ +L    E  ++H +    NILL  +                G
Sbjct: 110 INILWKLEVAKQLAAAMHFL---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166

Query: 145 M------------------------GNQFSTNGDVYSYGKLLLEIFT 167
           +                            +   D +S+G  L EI +
Sbjct: 167 ISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICS 213

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           +   +  LH  +   IVH D KP NILLD+DM 
Sbjct: 133 LLEVICALHKLN---IVHRDLKPENILLDDDMN 162

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 32/103 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------ 146
           F+    L +  DV  A+EYL     K  +H D    N L+++     V ++G+       
Sbjct: 117 FQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173

Query: 147 ----------------------NQFSTNGDVYSYGKLLLEIFT 167
                                 ++FS+  D++++G L+ EI++
Sbjct: 174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 42.6 bits (101), Expect = 6e-05
 Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           +  +  VA  +E+L   + +  +H D    NILL       +             +Y   
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 207

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+S+G LL EIF+
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +    +YLH +    ++H D K  N+ L+ D+
Sbjct: 150 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDL 178

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 4/49 (8%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
           + SA+ YL       I+H D K  NI++  D T  + ++G         
Sbjct: 139 LVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +A+AL Y H      ++H D KP N+LL +  
Sbjct: 118 LANALSYCHSKR---VIHRDIKPENLLLGSAG 146

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 42.3 bits (100), Expect = 7e-05
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 3/31 (9%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
             LEYLH      IVH D KP N+LL    T
Sbjct: 120 DGLEYLHSQG---IVHKDIKPGNLLLTTGGT 147

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 42.2 bits (100), Expect = 7e-05
 Identities = 23/111 (20%), Positives = 38/111 (34%), Gaps = 35/111 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           R  K    + +   V+  ++YL    E   VH D    N+LL       +          
Sbjct: 112 RHVKDKNIIELVHQVSMGMKYL---EESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168

Query: 142 ----EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                Y                     +FS+  DV+S+G L+ E F+ G++
Sbjct: 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 100 LSIAIDVASALEYLH--HHSEKPIVHCDSKPSNILLDNDMT 138
           L +   +  AL+  H        ++H D KP+N+ LD    
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN 154

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 42.2 bits (100), Expect = 8e-05
 Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +    +YLH +    ++H D K  N+ L+ D+
Sbjct: 124 IVLGCQYLHRNR---VIHRDLKLGNLFLNEDL 152

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +    EYLH      +++ D KP N+L+D  
Sbjct: 150 IVLTFEYLHSLD---LIYRDLKPENLLIDQQ 177

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 42.2 bits (99), Expect = 8e-05
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L I I +A A+E+LH      ++H D KPSNI    D  
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDV 202

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 42.3 bits (100), Expect = 8e-05
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           +S    +A  +EYL   + +  +H D    N+L+  +    +              Y   
Sbjct: 206 VSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                              ++   DV+S+G L+ EIFT
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 42.3 bits (100), Expect = 9e-05
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           I +    AL +L       I+H D KPSNILLD  
Sbjct: 130 ITLATVKALNHLK--ENLKIIHRDIKPSNILLDRS 162

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 42.7 bits (100), Expect = 9e-05
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
            ++  D++SAL YLH +    I+H D KP NI+L   
Sbjct: 124 RTLLSDISSALRYLHENR---IIHRDLKPENIVLQPG 157

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           +A AL Y H      ++H D KP N+L+    
Sbjct: 123 LADALHYCHERK---VIHRDIKPENLLMGYKG 151

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 41.8 bits (99), Expect = 9e-05
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           + + + YLH H    I+H D   SN+LL  +M
Sbjct: 121 IITGMLYLHSHG---ILHRDLTLSNLLLTRNM 149

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
           SA++Y H H    +VH D KP N+LLD  M   + ++G+ N  S   
Sbjct: 122 SAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 3/58 (5%)

Query: 79  KGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           K  +D      + R  +          +   L + H +    I+H D KP N+L++  
Sbjct: 90  KKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKR 144

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
            A+EY H H    IVH D KP N+LLD+++   + ++G+ N  +   
Sbjct: 119 CAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 33/107 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------ 146
           F   T L + +DV   + YL    E  ++H D    N L+  +    V ++GM       
Sbjct: 101 FAAETLLGMCLDVCEGMAYL---EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157

Query: 147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                                 +++S+  DV+S+G L+ E+F+ GK 
Sbjct: 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKI 204

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 6/65 (9%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYGMGNQ 148
                 + L +A  +  ALE+LH +     VH +    NI +D +  + V    YG   +
Sbjct: 154 HVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQSQVTLAGYGFAFR 210

Query: 149 FSTNG 153
           +  +G
Sbjct: 211 YCPSG 215

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 41.9 bits (99), Expect = 1e-04
 Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           IA+ +  ALE+LH  S+  ++H D KPSN+L++  
Sbjct: 114 IAVSIVKALEHLH--SKLSVIHRDVKPSNVLINAL 146

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 41.8 bits (99), Expect = 1e-04
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
                 + +  A  +++AL YL     K  VH D    N+L+ ++    + ++G+     
Sbjct: 111 YSLDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167

Query: 147 ------------------------NQFSTNGDVYSYGKLLLEIFT 167
                                    +F++  DV+ +G  + EI  
Sbjct: 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 212

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L I + +A A+E+LH    K ++H D KPSNI    D  
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDV 156

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
              S L +LH  +   IVH D KP NIL+   
Sbjct: 126 QTTSGLAHLHSLN---IVHRDLKPHNILISMP 154

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 3/39 (7%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L +   +   ++Y+H    K +++ D KPSNI L +   
Sbjct: 125 LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQ 160

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
           S ++Y H H    +VH D KP N+LLD  M   + ++G+ N  S   
Sbjct: 127 SGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 7/43 (16%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYGM 145
           + SAL+YLH  SEK +V+ D K  N++LD D   H+   ++G+
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDG--HIKITDFGL 295

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           L IA  +AS + YL   + +  VH D    N L+  ++   +              Y +G
Sbjct: 136 LHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVG 192

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                             +F+T  DV+S+G +L EIFT
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 12/69 (17%)

Query: 94  FKPCTRLS------IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYG 144
                         + I +   LEY+H +     VH D K +N+LL       V   +YG
Sbjct: 142 SGQNGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVYLADYG 198

Query: 145 MGNQFSTNG 153
           +  ++  NG
Sbjct: 199 LSYRYCPNG 207

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           L   + +  AL+++H   ++ I+H D K  NI L  D T
Sbjct: 128 LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGT 163

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 35/109 (32%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------ 146
           F     + +   V + + YL   S+   VH D    N+L+D+++   V ++G+       
Sbjct: 148 FTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204

Query: 147 ------------------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                                     FS+  DV+S+G ++ E+   G+R
Sbjct: 205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 17/70 (24%)

Query: 69  IGAGSFGSVCK--GILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDS 126
           +  GS G + K  G L  D+ +  +                  LEYLH    + I+H D 
Sbjct: 132 LEGGSLGQLIKQMGCLPEDRALYYLGQ------------ALEGLEYLH---TRRILHGDV 176

Query: 127 KPSNILLDND 136
           K  N+LL +D
Sbjct: 177 KADNVLLSSD 186

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           V  AL+ +H       +H D KP N+LLD  
Sbjct: 177 VVLALDAIHSMG---FIHRDVKPDNMLLDKS 204

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 23/105 (21%), Positives = 31/105 (29%), Gaps = 34/105 (32%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F   T    A+ VA  + YL     K  +H D    N+LL       +            
Sbjct: 118 FLLGTLSRYAVQVAEGMGYL---ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174

Query: 142 --EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
              Y M                    FS   D + +G  L E+FT
Sbjct: 175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 102 IAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           + + +  AL YL    +  ++H D KPSNILLD  
Sbjct: 129 MTVAIVKALYYLK--EKHGVIHRDVKPSNILLDER 161

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           L++A  VA+ + YL   +    VH D    N L+   +   + ++GM             
Sbjct: 161 LAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVG 217

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                             +F+T  DV+S+G +L EIFT
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 8/56 (14%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYGMGNQFSTNGDVYSY 158
           +  A++ +H       VH D KP NILLD     H+   ++G   +   +G V S 
Sbjct: 171 IVMAIDSVHRLG---YVHRDIKPDNILLDRC--GHIRLADFGSCLKLRADGTVRSL 221

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 41.2 bits (97), Expect = 2e-04
 Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 35/111 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---- 146
            +F     + +   +A+ ++YL   +    VH D    NIL+++++   V ++G+     
Sbjct: 142 GEFSVLQLVGMLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198

Query: 147 --------------------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                                      +F++  DV+S+G ++ E+ T G+R
Sbjct: 199 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 12/57 (21%), Positives = 23/57 (40%), Gaps = 3/57 (5%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQ 148
           +       +S A+ +   +E +H   +  I+H D KP N +L N      +    + 
Sbjct: 167 KVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSA 220

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 3/33 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDMT 138
           +  A+ +LH ++   IVH D KP NILLD++M 
Sbjct: 209 LLEAVSFLHANN---IVHRDLKPENILLDDNMQ 238

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 40.7 bits (96), Expect = 2e-04
 Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 35/100 (35%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------EYGMG 146
           +   + VA  ++YL   + K  VH D    N +LD   T  V              Y + 
Sbjct: 131 IGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVH 187

Query: 147 -------------------NQFSTNGDVYSYGKLLLEIFT 167
                               +F+T  DV+S+G LL E+ T
Sbjct: 188 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           + SALEYLH    + +V+ D K  N++LD D
Sbjct: 114 IVSALEYLH---SRDVVYRDIKLENLMLDKD 141

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 34/107 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +        +   V+  ++YL    EK  VH +    N+LL N     +          
Sbjct: 431 EEIPVSNVAELLHQVSMGMKYL---EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487

Query: 142 ----EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
                Y                     +FS+  DV+SYG  + E  +
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +  A++ +H       VH D KP NIL+D +
Sbjct: 184 MVIAIDSVHQLH---YVHRDIKPDNILMDMN 211

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
            +A  +  AL +LH +    + H D KP NIL  N 
Sbjct: 127 HMAYQLCHALRFLHENQ---LTHTDLKPENILFVNS 159

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 40.6 bits (96), Expect = 3e-04
 Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 32/105 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
              K  T +  ++ +  A+ YL        VH D    NIL+ +     +          
Sbjct: 108 NSLKVLTLVLYSLQICKAMAYL---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIE 164

Query: 142 --EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
             +Y                     +F+T  DV+ +   + EI +
Sbjct: 165 DEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILS 209

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 40.7 bits (96), Expect = 3e-04
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +ASAL YLH      IV+ D KP NILLD+ 
Sbjct: 148 IASALGYLH---SLNIVYRDLKPENILLDSQ 175

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
              I++  AL YL   S   + H D KP NILLD+ 
Sbjct: 141 LYCIEILKALNYLRKMS---LTHTDLKPENILLDDP 173

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 30/88 (34%)

Query: 109 ALEYLHHHSEKPIVHCDSKPSNILLDND-------------------MTTHV-------- 141
            +++LH      I+H D KPSNI++ +D                   MT +V        
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAP 195

Query: 142 EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
           E  +G  +  N D++S G ++ E+  G 
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMIKGG 223

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 33/98 (33%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-------------THVEYGMG 146
           + +   +A+ +EYL   S   +VH D    N+L+ + +                  Y + 
Sbjct: 131 VHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187

Query: 147 -----------------NQFSTNGDVYSYGKLLLEIFT 167
                             +FS + D++SYG +L E+F+
Sbjct: 188 GNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 40.3 bits (95), Expect = 3e-04
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 35/111 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +        +   V+  ++YL    EK  VH D    N+LL N     +          
Sbjct: 105 EEIPVSNVAELLHQVSMGMKYL---EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161

Query: 142 ----EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                Y                     +FS+  DV+SYG  + E  + G++
Sbjct: 162 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 40.2 bits (95), Expect = 3e-04
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +A AL++LH      I++ D KP NILLD +
Sbjct: 135 LALALDHLHSLG---IIYRDLKPENILLDEE 162

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 3/32 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
            + SA+ ++H      +VH D KP N+L  ++
Sbjct: 114 KLVSAVSHMHDVG---VVHRDLKPENLLFTDE 142

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           V +A+++ H      +VH D K  NIL+D   
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRR 176

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 40.4 bits (95), Expect = 4e-04
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 35/109 (32%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------ 146
           F     + +   +AS ++YL   S+   VH D    NIL+++++   V ++G+G      
Sbjct: 144 FTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200

Query: 147 ------------------------NQFSTNGDVYSYGKLLLEIFT-GKR 170
                                    +F++  DV+SYG +L E+ + G+R
Sbjct: 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 40.3 bits (95), Expect = 4e-04
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 30/89 (33%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDND-------------------MTTHV------- 141
             L++LH H    +VH D KP NIL+ +                    +T+ V       
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRA 187

Query: 142 -EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
            E  + + ++T  D++S G +  E+F  K
Sbjct: 188 PEVLLQSSYATPVDLWSVGCIFAEMFRRK 216

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 40.2 bits (95), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           ++ AL +LH      I++ D KP NI+L++ 
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQ 157

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 35/100 (35%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           +S  + VA  +EYL   +E+  VH D    N +LD   T  V ++G+             
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183

Query: 147 -------------------NQFSTNGDVYSYGKLLLEIFT 167
                               +F+T  DV+S+G LL E+ T
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 40.1 bits (94), Expect = 4e-04
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 35/100 (35%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------ 146
           +   + VA  +++L   + K  VH D    N +LD   T  V ++G+             
Sbjct: 195 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251

Query: 147 -------------------NQFSTNGDVYSYGKLLLEIFT 167
                               +F+T  DV+S+G LL E+ T
Sbjct: 252 NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 12/49 (24%), Positives = 17/49 (34%), Gaps = 6/49 (12%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYGMGNQFSTNG 153
           S + Y H      I H D K  N LLD      +   ++G       + 
Sbjct: 127 SGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 39.9 bits (94), Expect = 4e-04
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 30/89 (33%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDND-------------------MTTHV------- 141
             L++LH +    IVH D KP NIL+ +                    +T  V       
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187

Query: 142 -EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
            E  + + ++T  D++S G +  E+F  K
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 216

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 40.5 bits (95), Expect = 4e-04
 Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           + S LE+LH  +   I++ D KP N+LLD+D
Sbjct: 298 IVSGLEHLHQRN---IIYRDLKPENVLLDDD 325

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 40.0 bits (94), Expect = 4e-04
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 36/101 (35%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------EY- 143
           L +A D+A   +YL    E   +H D    N LL       V                Y 
Sbjct: 143 LHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199

Query: 144 ---GMG--------------NQFSTNGDVYSYGKLLLEIFT 167
              G                  F++  D +S+G LL EIF+
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 32/103 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
               + +  A  +++AL YL     K  VH D    N+L+ ++    +            
Sbjct: 488 LDLASLILYAYQLSTALAYL---ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544

Query: 142 EYGMG-----------------NQFSTNGDVYSYGKLLLEIFT 167
            Y                     +F++  DV+ +G  + EI  
Sbjct: 545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM 587

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           DV   + +L  +    IVH + KP NI+    
Sbjct: 120 DVVGGMNHLRENG---IVHRNIKPGNIMRVIG 148

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 39.6 bits (93), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +  AL Y+H      I+H D KP NI +D  
Sbjct: 125 ILEALSYIHSQG---IIHRDLKPMNIFIDES 152

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +  ALE+LH      I++ D K  NILLD++
Sbjct: 168 IVLALEHLHKLG---IIYRDIKLENILLDSN 195

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 40.3 bits (94), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 19/31 (61%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +   LE++H+     +V+ D KP+NILLD  
Sbjct: 301 IILGLEHMHNRF---VVYRDLKPANILLDEH 328

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 3/41 (7%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
            +A  +  ++ +LH +    + H D KP NIL      T  
Sbjct: 122 KMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEA 159

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           + + YLH      I H D KP N+LLD   
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERD 142

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 6/65 (9%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---EYGMGNQ 148
           + F   T L +++ +   LEY+H H     VH D K SN+LL+      V   +YG+  +
Sbjct: 147 KRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203

Query: 149 FSTNG 153
           +   G
Sbjct: 204 YCPEG 208

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 39.7 bits (93), Expect = 6e-04
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 36/101 (35%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------EY- 143
           L +A D+A   +YL    E   +H D    N LL       V                Y 
Sbjct: 184 LHVARDIACGCQYL---EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240

Query: 144 ---GMG--------------NQFSTNGDVYSYGKLLLEIFT 167
              G                  F++  D +S+G LL EIF+
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDN 135
           D+ +A+++LH H+   I H D KP N+L  +
Sbjct: 136 DIGTAIQFLHSHN---IAHRDVKPENLLYTS 163

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.8 bits (93), Expect = 6e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +   LE LH      IV+ D KP NILLD+ 
Sbjct: 295 ICCGLEDLHRER---IVYRDLKPENILLDDH 322

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 39.4 bits (92), Expect = 6e-04
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%)

Query: 101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV 141
           +I   + SAL YLH+     I H D KP N L   + +  +
Sbjct: 172 NIMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEI 209

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 39.1 bits (92), Expect = 7e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 3/30 (10%)

Query: 108 SALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
           + + YLH      I H D KP N+LLD   
Sbjct: 116 AGVVYLHGIG---ITHRDIKPENLLLDERD 142

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 39.2 bits (92), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           V  A+ + H+     ++H D K  NIL+D +
Sbjct: 158 VLEAVRHCHNCG---VLHRDIKDENILIDLN 185

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 39.5 bits (93), Expect = 7e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           +A  L +L     K I++ D K  N++LD++
Sbjct: 130 IAIGLFFLQ---SKGIIYRDLKLDNVMLDSE 157

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 39.3 bits (92), Expect = 7e-04
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 3/31 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDN 135
            +  A++YLH  +   I H D KP N+L  +
Sbjct: 169 SIGEAIQYLHSIN---IAHRDVKPENLLYTS 196

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 39.3 bits (92), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           ++ AL YLH   E+ I++ D K  N+LLD++
Sbjct: 162 ISLALNYLH---ERGIIYRDLKLDNVLLDSE 189

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           + SAL +LH   +K I++ D K  N+LLD++
Sbjct: 133 IISALMFLH---DKGIIYRDLKLDNVLLDHE 160

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 39.1 bits (92), Expect = 8e-04
 Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 106 VASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           ++ AL YLH   E+ I++ D K  N+LLD++
Sbjct: 119 ISLALNYLH---ERGIIYRDLKLDNVLLDSE 146

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 39.2 bits (92), Expect = 8e-04
 Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 3/31 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDN 135
           DVASAL++LH+     I H D KP NIL ++
Sbjct: 119 DVASALDFLHNKG---IAHRDLKPENILCEH 146

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 39.4 bits (92), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 105 DVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           DV   + +L  +    IVH + KP NI+    
Sbjct: 120 DVVGGMNHLRENG---IVHRNIKPGNIMRVIG 148

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 39.1 bits (92), Expect = 9e-04
 Identities = 20/108 (18%), Positives = 36/108 (33%), Gaps = 34/108 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL------------------DN 135
                 L+  + +A  + YL    ++ +VH D    N+L+                    
Sbjct: 114 IGSQYLLNWCVQIAKGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170

Query: 136 DMTTHVEYGM------------GNQFSTNGDVYSYGKLLLEIFT-GKR 170
           +   H E G                ++   DV+SYG  + E+ T G +
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 39.3 bits (92), Expect = 9e-04
 Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 47/146 (32%)

Query: 100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---------MTTHVEYGMG---- 146
           L     +   +EYL     K  +H D    NIL++N+         +T  +         
Sbjct: 148 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 204

Query: 147 ------------------NQFSTNGDVYSYGKLLLEIFT---GKRSTSDMFTEGLGLHNF 185
                             ++FS   DV+S+G +L E+FT     +S    F   +G    
Sbjct: 205 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQ 264

Query: 186 VKMAVPDQISEVLDPLFVAGGEEEGE 211
            +M V      +++ L      +   
Sbjct: 265 GQMIV----FHLIELL------KNNG 280

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 38.8 bits (91), Expect = 9e-04
 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 3/26 (11%)

Query: 110 LEYLHHHSEKPIVHCDSKPSNILLDN 135
           L+YLH   +  IVH D K  N+L++ 
Sbjct: 135 LKYLH---DNQIVHRDIKGDNVLINT 157

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	268
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.97
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.97
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
3uqc_A	286	Probable conserved transmembrane protein; structur	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.95
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.95
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.95
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.95
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.95
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.95
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.95
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.95
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.95
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.94
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.94
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.94
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.94
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.94
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.94
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.94
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.94
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.94
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.94
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.94
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.94
3niz_A	311	Rhodanese family protein; structural genomics, str	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.94
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.94
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.94
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.94
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.94
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.94
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.94
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.94
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.94
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.94
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.94
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.94
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.94
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.94
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.94
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.94
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.93
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.93
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.93
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.93
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.93
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.93
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.93
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.93
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.93
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.93
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.93
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.93
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.93
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.93
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.93
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.93
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.93
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.93
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.93
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.93
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.93
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.93
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.93
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.93
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.93
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.93
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.93
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.93
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.93
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.93
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.93
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.93
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.93
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.93
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.93
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.93
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.93
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.93
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.93
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.92
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.92
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.92
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.92
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.92
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.92
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.92
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.92
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.92
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.92
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.92
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.92
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.92
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.92
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.92
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.92
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.92
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.92
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.92
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.92
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.91
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.91
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.91
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.91
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.91
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.9
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.89
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.88
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.75
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.34
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.32
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.31
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.18
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.13
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.92
2ks1_B	44	Epidermal growth factor receptor; ERBB1, ERBB2, tr	96.45
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.45
2l2t_A	44	Receptor tyrosine-protein kinase ERBB-4; transmemb	96.23
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.07
2jwa_A	44	Receptor tyrosine-protein kinase ERBB-2; transmemb	95.04
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.18
2k9y_A	41	Ephrin type-A receptor 2; receptor tyrosine kinase	90.86
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	88.96
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	88.15
2klu_A	70	T-cell surface glycoprotein CD4; cell membrane, di	88.14
2k1k_A	38	Ephrin type-A receptor 1; EPHA1, receptor tyrosine	87.8
2l9u_A	40	Receptor tyrosine-protein kinase ERBB-3; transmenb	87.76
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	84.23

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=4.1e-38  Score=262.21  Aligned_cols=169  Identities=28%  Similarity=0.471  Sum_probs=129.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +++...+.||+|+||+||+|++..   .||||.+..                                            
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy  112 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW  112 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence            566777889999999999999852   489994432                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         ..+..++.|++.||+|||+.+   |+||||||+|||++.++.+|+ |||++          
T Consensus       113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~  189 (307)
T 3omv_A          113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ  189 (307)
T ss_dssp             CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred             CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence                               456889999999999999988   999999999999999998888 56543          


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc-cchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP-DQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~  203 (268)
                                            .+|+.++|||||||++||++||+.||.+..... .+......... +.....      
T Consensus       190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~p~~~~~------  262 (307)
T 3omv_A          190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPDLSKL------  262 (307)
T ss_dssp             ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCCCCSTTS------
T ss_pred             eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCCCCcccc------
Confidence                                  247789999999999999999999997543221 11111111111 111100      


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                         ..+++..+.+++..||+.||++||||.+|++.|+.++..
T Consensus       263 -------------------~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          263 -------------------YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             -------------------CTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             -------------------cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence                               014456788999999999999999999999999988754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.4e-37  Score=258.64  Aligned_cols=168  Identities=24%  Similarity=0.399  Sum_probs=128.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|++.     .++..||||.+..                                       
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            45666788999999999999874     2578999994432                                       


Q ss_pred             -----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee
Q 044875           97 -----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV  141 (268)
Q Consensus        97 -----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i  141 (268)
                                                         ..+..++.|++.||.|||+.+   ++||||||+|||++.++.+|+
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEEE
Confidence                                               245789999999999999988   999999999999999999988


Q ss_pred             -eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhC
Q 044875          142 -EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       142 -e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                       |||.+                             ..|+.++|||||||++||++| |+.||.+....  .+...+..+.
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~~~  247 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECITQGR  247 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHHTC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC
Confidence             45432                             458899999999999999999 89999864322  1222221111


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ....                            +..++.++.+++..||+.||++||||++|+++|+.+.+.
T Consensus       248 ~~~~----------------------------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          248 VLQR----------------------------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             CCCC----------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCC----------------------------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            1100                            114456788999999999999999999999999988764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.2e-37  Score=260.22  Aligned_cols=127  Identities=20%  Similarity=0.403  Sum_probs=99.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      +++++.|++.||.|||+.+   ++||||||+|||++.++.+|+ |||++                             ..
T Consensus       147 ~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~  223 (308)
T 4gt4_A          147 FVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK  223 (308)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCC
Confidence            4679999999999999988   999999999999999999988 56543                             35


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      |+.++|||||||++||++| |+.||.+....  .+...+..+.....                            +.+++
T Consensus       224 ~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~~~~~~~~----------------------------p~~~~  273 (308)
T 4gt4_A          224 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIRNRQVLPC----------------------------PDDCP  273 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHHTTCCCCC----------------------------CTTCC
T ss_pred             CCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC----------------------------cccch
Confidence            7889999999999999998 89999864322  22222221111100                            11455


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      ..+.+++..||+.||++||||++|++.|+.+
T Consensus       274 ~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          274 AWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            6789999999999999999999999999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=4e-37  Score=259.25  Aligned_cols=167  Identities=26%  Similarity=0.403  Sum_probs=128.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...++||+|+||.||+|++.     .+++.||||.+..                                       
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            34556678999999999999874     2578999994432                                       


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           ..++.++.|++.||+|||+.+   |+||||||+|||++.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCcE
Confidence                                                 235789999999999999988   9999999999999999999


Q ss_pred             ee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhh
Q 044875          140 HV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       140 ~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~  188 (268)
                      |+ |||.+                             ..|+.++|||||||++||++| |+.||.+....  .+...+..
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~~  275 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCITQ  275 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHHc
Confidence            98 55533                             457889999999999999999 89999864322  11122211


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      +.....                            +..++.++.+++..||+.||++||||++|+++|+.+.+
T Consensus       276 g~~~~~----------------------------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          276 GRELER----------------------------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             TCCCCC----------------------------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCC----------------------------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            111100                            11345668899999999999999999999999998865

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=2.4e-36  Score=252.35  Aligned_cols=186  Identities=22%  Similarity=0.279  Sum_probs=128.8

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      +...+.||+|+||+||+|++  +|+.||||.++.                                              
T Consensus         5 i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey   82 (303)
T 3hmm_A            5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence            44567899999999999998  589999994432                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhc-----CCCCeeecCCCCCccccCCCCceee-eeccCC------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHH-----SEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN------  147 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~-----~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~------  147 (268)
                                       ..+.+++.+++.||+|||+.     ..++|+||||||+|||++.++.+|+ |||++.      
T Consensus        83 ~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~  162 (303)
T 3hmm_A           83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT  162 (303)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred             CCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence                             45678999999999999986     1235999999999999999999998 666431      


Q ss_pred             -------------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc-cchh
Q 044875          148 -------------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP-DQIS  195 (268)
Q Consensus       148 -------------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~  195 (268)
                                                     .++.++|||||||++||++||++|+................... ..+.
T Consensus       163 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~  242 (303)
T 3hmm_A          163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR  242 (303)
T ss_dssp             TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred             CceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHH
Confidence                                           24568999999999999999988775432211111100000000 0000


Q ss_pred             h-hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          196 E-VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       196 ~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      . ..+..+....+..           ....+++..+.+++..||+.||++||||.+|++.|+++.++
T Consensus       243 ~~~~~~~~rp~~p~~-----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          243 KVVCEQKLRPNIPNR-----------WQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHTTSCCCCCCCGG-----------GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHhcccCCCCCCcc-----------ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            0 0000000000000           00125677899999999999999999999999999988753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2e-36  Score=257.09  Aligned_cols=178  Identities=20%  Similarity=0.312  Sum_probs=136.7

Q ss_pred             HHHHHHhCCCCcCCcccCCCcceEEEEEecCC-----CeEEEEeecCc--------------------------------
Q 044875           54 ESLLKATGGFSSANIIGAGSFGSVCKGILDPD-----QTVVSVRDFKP--------------------------------   96 (268)
Q Consensus        54 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~l~~--------------------------------   96 (268)
                      .+++...++|...+.||+|+||.||+|.+...     ++.||||.+..                                
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            34555667888889999999999999997533     36899994332                                


Q ss_pred             ------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 044875           97 ------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKP  128 (268)
Q Consensus        97 ------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~  128 (268)
                                                                      .....++.||+.||.|||+.+   ++||||||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~  213 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAA  213 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCc
Confidence                                                            234678899999999999988   99999999


Q ss_pred             CccccCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccc
Q 044875          129 SNILLDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFT  177 (268)
Q Consensus       129 ~nill~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~  177 (268)
                      +|||++.++.+|+ |||++                             ..|+.++|||||||++||++| |+.||.+...
T Consensus       214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            9999999999988 66644                             357889999999999999998 9999986432


Q ss_pred             cccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          178 EGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       178 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      .. .+......+.....+                            ..++.++.+++..||+.||++||||++|++.|+.
T Consensus       294 ~~-~~~~~i~~g~~~~~p----------------------------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~  344 (353)
T 4ase_A          294 DE-EFCRRLKEGTRMRAP----------------------------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN  344 (353)
T ss_dssp             SH-HHHHHHHHTCCCCCC----------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HH-HHHHHHHcCCCCCCC----------------------------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence            21 122222222111111                            1334568899999999999999999999999999


Q ss_pred             hHHHHh
Q 044875          258 VKSTLL  263 (268)
Q Consensus       258 l~~~~~  263 (268)
                      +.+.-.
T Consensus       345 llq~~~  350 (353)
T 4ase_A          345 LLQANA  350 (353)
T ss_dssp             HHHHTC
T ss_pred             HHHHhh
Confidence            876543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1e-34  Score=244.12  Aligned_cols=171  Identities=19%  Similarity=0.254  Sum_probs=130.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||.||+|+...+|+.||+|.+.                                             
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L  137 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL  137 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcH
Confidence            45666778999999999999998899999999432                                             


Q ss_pred             -----------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC----------------
Q 044875           96 -----------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG----------------  146 (268)
Q Consensus        96 -----------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~----------------  146 (268)
                                 +.....++.|++.||.|||+.+   |+||||||+|||++.++ ..|+ |||.+                
T Consensus       138 ~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~  214 (336)
T 4g3f_A          138 GQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD  214 (336)
T ss_dssp             HHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC------------C
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCC
Confidence                       2456789999999999999988   99999999999999876 4666 55532                


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..|+.++||||+||++|||++|+.||....... ....... ..+. ..+ +            
T Consensus       215 ~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~-~~~~-~~~-~------------  278 (336)
T 4g3f_A          215 YIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIAS-EPPP-IRE-I------------  278 (336)
T ss_dssp             CCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHH-SCCG-GGG-S------------
T ss_pred             ccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHc-CCCC-chh-c------------
Confidence                            357889999999999999999999997543221 1111111 1110 000 0            


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                  +...+..+.+++..||+.||++|||+.|+++.|....+..
T Consensus       279 ------------~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          279 ------------PPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             ------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             ------------CccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence                        0133456788999999999999999999999888776653

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.3e-35  Score=240.26  Aligned_cols=160  Identities=24%  Similarity=0.384  Sum_probs=119.8

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ....+||+|+||+||+|....++..||+|.+..                                               
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            344679999999999999998999999994321                                               


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMG--------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~--------  146 (268)
                                          .....++.|++.||.|||+++ ++|+||||||+|||++. ++..|+ |||.+        
T Consensus       109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~  187 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA  187 (290)
T ss_dssp             ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCcc
Confidence                                345678999999999999875 56999999999999984 677777 55543        


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~  209 (268)
                                      +.|+.++|||||||++|||++|+.||.+..... .+........ +.....             
T Consensus       188 ~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~~~~~~~~-------------  253 (290)
T 3fpq_A          188 KAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVKPASFDK-------------  253 (290)
T ss_dssp             EESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCCCGGGGG-------------
T ss_pred             CCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCCCCCCCCc-------------
Confidence                            358899999999999999999999997532211 1111111111 111111             


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ..+.++.+++..||+.||++|||++++++
T Consensus       254 ---------------~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          254 ---------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                           12234778999999999999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=8.5e-34  Score=239.22  Aligned_cols=162  Identities=19%  Similarity=0.359  Sum_probs=125.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||.||+|+...+|+.||+|.+.                                             
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            45777888999999999999999899999999432                                             


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                     +.....++.|++.||.|||+.+   |+||||||+|||++.++..|+ |||.+             
T Consensus       154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~  230 (346)
T 4fih_A          154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  230 (346)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCC
T ss_pred             CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCCCccccc
Confidence                           2456789999999999999998   999999999999999998888 55543             


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                    ..|+.++||||+||++|||++|+.||.+....  .....+....+..+..                
T Consensus       231 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~~~----------------  292 (346)
T 4fih_A          231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRLKN----------------  292 (346)
T ss_dssp             CSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSSCCCCSC----------------
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCCCc----------------
Confidence                          45889999999999999999999999753221  1112222111111100                


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                ....+.++.+++..||+.||++|||++|+++
T Consensus       293 ----------~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          293 ----------LHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             ----------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                      0022445788999999999999999999874

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=6.8e-34  Score=240.18  Aligned_cols=160  Identities=19%  Similarity=0.320  Sum_probs=118.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+..                                            
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            678888999999999999999988999999994421                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.|++.||.|||+.+   |+||||||+|||++.++..|+ |||.         
T Consensus       104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  180 (350)
T 4b9d_A          104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE  180 (350)
T ss_dssp             CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred             CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence                                 235678999999999999998   999999999999999998888 4443         


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        +..|+.++||||+||++|||++|+.||....... .+........+. ..            
T Consensus       181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~-~~~~i~~~~~~~-~~------------  246 (350)
T 4b9d_A          181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKN-LVLKIISGSFPP-VS------------  246 (350)
T ss_dssp             HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHTCCCC-CC------------
T ss_pred             cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH-HHHHHHcCCCCC-CC------------
Confidence                              3568899999999999999999999997532211 111111111110 00            


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ...+.++.+++..||+.||++|||++++++
T Consensus       247 ----------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          247 ----------------LHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                            022445788999999999999999999985

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.97  E-value=1.1e-32  Score=238.03  Aligned_cols=162  Identities=19%  Similarity=0.357  Sum_probs=125.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||.||+|....+|+.||+|.+.                                             
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            45788889999999999999999899999999432                                             


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                     +.....++.+++.||.|||+++   |+||||||+|||++.++..|+ |||.+             
T Consensus       231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~  307 (423)
T 4fie_A          231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  307 (423)
T ss_dssp             TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCC
T ss_pred             CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCCcccccc
Confidence                           2456789999999999999998   999999999999999998888 55543             


Q ss_pred             --------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                    ..|+.++||||+||++|||++|+.||.+....  .....+....+..+...               
T Consensus       308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~~~~~~~---------------  370 (423)
T 4fie_A          308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDNLPPRLKNL---------------  370 (423)
T ss_dssp             EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSCCCCCSCT---------------
T ss_pred             ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcCCCCCCccc---------------
Confidence                          45889999999999999999999999753221  11122211111111000               


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                 ...+.++.+++..||+.||++|||+.|+++
T Consensus       371 -----------~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          371 -----------HKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             -----------TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                       022345788999999999999999999875

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.97  E-value=1.4e-32  Score=225.47  Aligned_cols=159  Identities=23%  Similarity=0.362  Sum_probs=120.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.+.                                             
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            67888999999999999999998899999999442                                             


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                        +.....++.|++.||.|||+++   ++||||||+|||++.++..++ |||.+          
T Consensus        93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~  169 (275)
T 3hyh_A           93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK  169 (275)
T ss_dssp             ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred             eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCCCccC
Confidence                              1456789999999999999998   999999999999999988888 55543          


Q ss_pred             ----------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..+ +.++||||+||++|||++|+.||.+....  .+......... .++.             
T Consensus       170 ~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~--~~~~~i~~~~~-~~p~-------------  233 (275)
T 3hyh_A          170 TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP--VLFKNISNGVY-TLPK-------------  233 (275)
T ss_dssp             -----CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-CCCT-------------
T ss_pred             CeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCC-CCCC-------------
Confidence                            233 57899999999999999999999752211  11111111111 0100             


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ..+.++.+++..|++.||++|||++|+++
T Consensus       234 ---------------~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          234 ---------------FLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             ---------------TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ---------------CCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                           12345678899999999999999999975

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.97  E-value=2.1e-32  Score=227.55  Aligned_cols=158  Identities=20%  Similarity=0.310  Sum_probs=123.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+.                                             
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm  111 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL  111 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            56888899999999999999999899999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.|++.||.|||+++   |+||||||+|||++.++..|+ |||.+         
T Consensus       112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~  188 (311)
T 4aw0_A          112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  188 (311)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence                               2456789999999999999998   999999999999999988888 56543         


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..|+.++|+||+||++|||++|+.||......  .+......... .+++          
T Consensus       189 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~~~-~~p~----------  255 (311)
T 4aw0_A          189 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG--LIFAKIIKLEY-DFPE----------  255 (311)
T ss_dssp             CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCC-CCCT----------
T ss_pred             ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCC-CCCc----------
Confidence                                34778999999999999999999999753211  11111111110 0110          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                                        ..+.++.+++..|++.||++|||++|+.
T Consensus       256 ------------------~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          256 ------------------KFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             ------------------TCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             ------------------ccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                              1233467889999999999999999864

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=1.7e-31  Score=225.33  Aligned_cols=195  Identities=34%  Similarity=0.562  Sum_probs=150.3

Q ss_pred             ccccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------
Q 044875           46 DLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------   96 (268)
Q Consensus        46 ~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------   96 (268)
                      .....+++.++..++++|...+.||+|+||.||+|... +++.||+|.+..                             
T Consensus        15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             CccceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            34567899999999999999999999999999999876 688999994332                             


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .....++.+++.||.|||+.....++||||||+||+++.++..
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~  173 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA  173 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCE
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCE
Confidence                                                 2457899999999999999822239999999999999998877


Q ss_pred             ee-eeccC----------------------------CCcCccccEeechHHHHHHHhCCCCCCccc---ccccchhhHhh
Q 044875          140 HV-EYGMG----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMF---TEGLGLHNFVK  187 (268)
Q Consensus       140 ~i-e~~~~----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~---~~~~~~~~~~~  187 (268)
                      ++ +|+.+                            ..++.++||||||++++|+++|+.||....   ........+..
T Consensus       174 kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~  253 (326)
T 3uim_A          174 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK  253 (326)
T ss_dssp             EECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHT
T ss_pred             EeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHH
Confidence            77 44432                            235678999999999999999999997322   12233344443


Q ss_pred             hhCcc-chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          188 MAVPD-QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       188 ~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      ..... ......+..+.....                .+.+..+.+++..||+.||.+|||+.+|++.|++
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          254 GLLKEKKLEALVDVDLQGNYK----------------DEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             TTTSSCCSTTSSCTTCTTSCC----------------HHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHhhchhhhhhcChhhccccC----------------HHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            33322 334444443333322                3778889999999999999999999999999975

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=2.9e-31  Score=223.50  Aligned_cols=193  Identities=29%  Similarity=0.494  Sum_probs=144.8

Q ss_pred             ccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------
Q 044875           48 LLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------   96 (268)
Q Consensus        48 ~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------   96 (268)
                      ...+++.++..++++|...+.||+|+||.||+|... ++..||+|.+..                               
T Consensus        26 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~  104 (321)
T 2qkw_B           26 SYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC  104 (321)
T ss_dssp             ----CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC
T ss_pred             ceeecHHHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence            345666778888999999999999999999999976 688999993321                               


Q ss_pred             ----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           97 ----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        97 ----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                        .....++.+++.||.|||+.+   ++||||||+||+++.++..++ 
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~  181 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKIT  181 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEEC
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEe
Confidence                                              345679999999999999988   999999999999999887777 


Q ss_pred             eeccC-----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccc-cchhhHhh-hhC
Q 044875          142 EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG-LGLHNFVK-MAV  190 (268)
Q Consensus       142 e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~-~~~~~~~~-~~~  190 (268)
                      +|+..                             ..++.++||||||+++||+++|+.||....... .....+.. ...
T Consensus       182 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~  261 (321)
T 2qkw_B          182 DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN  261 (321)
T ss_dssp             CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT
T ss_pred             ecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc
Confidence            44422                             346788999999999999999999997543322 22222221 111


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      ...+...+++.+....                ..+.+..+.+++..||+.||++|||+.++++.|+.+.+
T Consensus       262 ~~~~~~~~~~~~~~~~----------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          262 NGQLEQIVDPNLADKI----------------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             TTCCCSSSSSSCTTCS----------------CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccHHHhcChhhcccc----------------CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            1223333333322222                23778889999999999999999999999999998765

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=2.4e-30  Score=216.39  Aligned_cols=191  Identities=27%  Similarity=0.467  Sum_probs=145.4

Q ss_pred             cccccCHHHHHHHhCCCCcC------CcccCCCcceEEEEEecCCCeEEEEeecCc------------------------
Q 044875           47 LLLNISYESLLKATGGFSSA------NIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------   96 (268)
Q Consensus        47 ~~~~~~~~~l~~~~~~f~~~------~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------   96 (268)
                      ....|++.++..++++|+..      +.||+|+||.||+|..  ++..+|+|.+..                        
T Consensus        11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~   88 (307)
T 2nru_A           11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ   88 (307)
T ss_dssp             CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred             CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence            45678999999999999987      8899999999999997  578899994321                        


Q ss_pred             --------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccc
Q 044875           97 --------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNIL  132 (268)
Q Consensus        97 --------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nil  132 (268)
                                                                  .....++.+++.||.|||+.+   ++|+||||+||+
T Consensus        89 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil  165 (307)
T 2nru_A           89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANIL  165 (307)
T ss_dssp             CTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred             CCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEE
Confidence                                                        234678999999999999988   999999999999


Q ss_pred             cCCCCceee-eeccC----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchh
Q 044875          133 LDNDMTTHV-EYGMG----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH  183 (268)
Q Consensus       133 l~~~~~~~i-e~~~~----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~  183 (268)
                      ++.++..++ +|+..                            +.++.++||||||+++||+++|..||........ +.
T Consensus       166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~  244 (307)
T 2nru_A          166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LL  244 (307)
T ss_dssp             ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TT
T ss_pred             EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HH
Confidence            998887776 44432                            1256789999999999999999999986433221 11


Q ss_pred             hHhhh--hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          184 NFVKM--AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       184 ~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      .+...  .....+.+.+++.+..                 .....+..+.+++..||+.||.+|||+.++++.|+++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          245 DIKEEIEDEEKTIEDYIDKKMND-----------------ADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHHHTTSCCHHHHSCSSCSC-----------------CCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHhhhhhhhhhhhccccccc-----------------cchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            21111  1112233333332211                 123667889999999999999999999999999998753

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=5.3e-32  Score=225.29  Aligned_cols=158  Identities=24%  Similarity=0.416  Sum_probs=114.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+..                                            
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            357777899999999999999988999999993311                                            


Q ss_pred             ---------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-e
Q 044875           97 ---------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-E  142 (268)
Q Consensus        97 ---------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e  142 (268)
                                                       .....++.|++.||.|||+.+   |+||||||+|||++.++..|+ |
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEcc
Confidence                                             114568899999999999998   999999999999999988888 5


Q ss_pred             eccC---------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchh
Q 044875          143 YGMG---------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH  183 (268)
Q Consensus       143 ~~~~---------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~  183 (268)
                      ||.+                                       ..|+.++||||+||++|||++   ||.........+.
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~  238 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT  238 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHH
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHH
Confidence            5542                                       357889999999999999996   6653211111111


Q ss_pred             hHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       184 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .......++    .                         ..........++..||+.||++|||+.++++
T Consensus       239 ~~~~~~~p~----~-------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          239 DVRNLKFPP----L-------------------------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHTTCCCH----H-------------------------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHhcCCCCC----C-------------------------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111111110    0                         0122334567899999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.97  E-value=1.2e-31  Score=222.81  Aligned_cols=158  Identities=21%  Similarity=0.304  Sum_probs=119.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+..   .+++.||+|.+..                                         
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            56888899999999999999863   3578999994321                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.|++.||.|||+.+   |+||||||+|||++.++..|+ |||.+       
T Consensus       104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred             EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence                                  456789999999999999998   999999999999999988888 44432       


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..|+.++||||+||++|||++|+.||.+....  .+......... .+++          
T Consensus       181 ~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~~~~-~~p~----------  247 (304)
T 3ubd_A          181 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK--ETMTMILKAKL-GMPQ----------  247 (304)
T ss_dssp             CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT----------
T ss_pred             ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH--HHHHHHHcCCC-CCCC----------
Confidence                                45789999999999999999999999753221  11111111111 0111          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh-----HHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT-----SDVV  252 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~-----~~v~  252 (268)
                                        ..+.++.+++..||+.||++|||+     +|++
T Consensus       248 ------------------~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil  280 (304)
T 3ubd_A          248 ------------------FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIK  280 (304)
T ss_dssp             ------------------TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHH
T ss_pred             ------------------cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHH
Confidence                              223457789999999999999995     5665

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=4.9e-31  Score=227.50  Aligned_cols=184  Identities=15%  Similarity=0.246  Sum_probs=124.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+|+.||||.+..                                            
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            467778899999999999999988999999994432                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.|++.||.|||+.+   |+||||||+|||++.++..++ |||.+     
T Consensus       134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~  210 (398)
T 4b99_A          134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCT  210 (398)
T ss_dssp             EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred             EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence                                    345779999999999999998   999999999999999888877 45432     


Q ss_pred             ---------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhh
Q 044875          147 ---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEV  197 (268)
Q Consensus       147 ---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~  197 (268)
                                                 ..++.++||||+||+++||++|+.||.+..... .+..........  .....
T Consensus       211 ~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~~~~~  289 (398)
T 4b99_A          211 SPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPAVIQA  289 (398)
T ss_dssp             -----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGGGTC-
T ss_pred             CccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhh
Confidence                                       235788999999999999999999997532211 111111111111  00000


Q ss_pred             cch----hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDP----LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...    ..........+...+.     .......++.+++..|++.||++|||+.|+++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          290 VGAERVRAYIQSLPPRQPVPWET-----VYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             ----CHHHHHHSSCCCCCCCHHH-----HSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hhhhhhhhhhhcCCCcCCCCHHH-----hCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000    0000000000000000     00112345778999999999999999999874

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=4.6e-30  Score=213.89  Aligned_cols=175  Identities=22%  Similarity=0.381  Sum_probs=129.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|+.  +++.||+|.+..                                           
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv   84 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLI   84 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEe
Confidence            36788889999999999999998  689999994432                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHh--------hcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           97 --------------------CTRLSIAIDVASALEYLH--------HHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh--------~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                          .....++.+++.||.|||        +.+   ++||||||+||+++.++..++ ||+.+ 
T Consensus        85 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~a~  161 (301)
T 3q4u_A           85 THYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIADLGLAV  161 (301)
T ss_dssp             ECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred             hhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEeeCCCee
Confidence                                345789999999999999        666   999999999999999888877 55532 


Q ss_pred             ------------------------------C------CcCccccEeechHHHHHHHhC----------CCCCCccccccc
Q 044875          147 ------------------------------N------QFSTNGDVYSYGKLLLEIFTG----------KRSTSDMFTEGL  180 (268)
Q Consensus       147 ------------------------------~------~~~~~~Dv~s~G~vl~el~tg----------~~p~~~~~~~~~  180 (268)
                                                    .      .++.++||||||+++||+++|          ..||........
T Consensus       162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~  241 (301)
T 3q4u_A          162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP  241 (301)
T ss_dssp             EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred             ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence                                          0      233589999999999999999          777765444333


Q ss_pred             chhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          181 GLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      ...................+..                   .....+..+.+++..||+.||++|||+.+|++.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          242 SFEDMRKVVCVDQQRPNIPNRW-------------------FSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             CHHHHHHHHTTSCCCCCCCGGG-------------------GGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhhhhHHHhccCCCCCCChhh-------------------ccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            3322222211111101000000                   0115677899999999999999999999999999986

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=4.4e-30  Score=216.47  Aligned_cols=188  Identities=19%  Similarity=0.231  Sum_probs=130.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+..  ++.||+|.+..                                            
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~  101 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT  101 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence            56777889999999999999984  78999994432                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhc----------CCCCeeecCCCCCccccCCCCceee-eeccC
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHH----------SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~----------~~~~i~h~dlk~~nill~~~~~~~i-e~~~~  146 (268)
                                         .....++.+++.||.|||+.          +   ++||||||+||+++.++..++ ||+.+
T Consensus       102 e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~DFg~a  178 (322)
T 3soc_A          102 AFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIADFGLA  178 (322)
T ss_dssp             ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             ecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEccCCcc
Confidence                               34577899999999999987          6   999999999999999988877 55533


Q ss_pred             ----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc
Q 044875          147 ----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       147 ----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                                                        ..++.++||||||+++||+++|+.||............... ....
T Consensus       179 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~-~~~~  257 (322)
T 3soc_A          179 LKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI-GQHP  257 (322)
T ss_dssp             EEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH-CSSC
T ss_pred             cccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh-ccCC
Confidence                                              12334679999999999999999999754332211111100 0001


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ......+.............       ......++..+.+++..||+.||++|||+.+|++.|+.+.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          258 SLEDMQEVVVHKKKRPVLRD-------YWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             CHHHHHHHHTTSCCCCCCCG-------GGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             chhhhhhhhhcccCCCCccc-------cccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11111110000000000000       001125567799999999999999999999999999999865

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=2.3e-30  Score=216.87  Aligned_cols=172  Identities=23%  Similarity=0.412  Sum_probs=132.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus        10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~   89 (310)
T 3s95_A           10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI   89 (310)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence            566777899999999999999988899999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+           
T Consensus        90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  166 (310)
T 3s95_A           90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE  166 (310)
T ss_dssp             TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred             CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence                              345678999999999999988   999999999999999887777 44432           


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                    ..++.++||||||+++||+++|..|+............        ....
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~--------~~~~  238 (310)
T 3s95_A          167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL--------NVRG  238 (310)
T ss_dssp             -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------CHHH
T ss_pred             ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------hhhc
Confidence                                          34678999999999999999999998754332211100        0111


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      ..+...                    +..++..+.+++..||+.||++|||+.++++.|+.+++.+.
T Consensus       239 ~~~~~~--------------------~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~  285 (310)
T 3s95_A          239 FLDRYC--------------------PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA  285 (310)
T ss_dssp             HHHHTC--------------------CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             cccccC--------------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence            111100                    01233458889999999999999999999999999988754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=2.3e-30  Score=220.90  Aligned_cols=119  Identities=23%  Similarity=0.401  Sum_probs=96.1

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------   96 (268)
                      ++....+.|...+.||+|+||+||+|+..   .+++.||+|.+..                                   
T Consensus        15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~   94 (361)
T 4f9c_A           15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH   94 (361)
T ss_dssp             HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred             hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence            33345678999999999999999999863   3578999994322                                   


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~------  146 (268)
                                            .....++.|++.||.|||+.+   |+||||||+|||++.+ ...++ |||.+      
T Consensus        95 ~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~  171 (361)
T 4f9c_A           95 VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT  171 (361)
T ss_dssp             EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred             EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence                                  456789999999999999998   9999999999999876 45544 55432      


Q ss_pred             --------------------------------------------------CCcCccccEeechHHHHHHHhCCCCCCccc
Q 044875          147 --------------------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMF  176 (268)
Q Consensus       147 --------------------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~  176 (268)
                                                                        ..|+.++||||+||+++||++|+.||....
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~  251 (361)
T 4f9c_A          172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS  251 (361)
T ss_dssp             SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCS
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCC
Confidence                                                              136788999999999999999999997543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=1.6e-30  Score=223.84  Aligned_cols=170  Identities=25%  Similarity=0.436  Sum_probs=131.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|.+..+++.||+|.+..                                           
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  192 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME  192 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence            3567777899999999999999988899999995432                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ |||.+         
T Consensus       193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~  269 (377)
T 3cbl_A          193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA  269 (377)
T ss_dssp             CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred             cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence                                345678999999999999988   999999999999998888877 55532         


Q ss_pred             --------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++||||||+++||+++ |..||......  ..............           
T Consensus       270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~-----------  336 (377)
T 3cbl_A          270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEKGGRLPC-----------  336 (377)
T ss_dssp             CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHTTCCCCC-----------
T ss_pred             ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC-----------
Confidence                                235678999999999999998 99999764321  11111111111000           


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                       +                ..++..+.+++..||+.||++|||++++++.|+.+.+..
T Consensus       337 -~----------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~  376 (377)
T 3cbl_A          337 -P----------------ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH  376 (377)
T ss_dssp             -C----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             -C----------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence             0                133456889999999999999999999999999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=1.2e-29  Score=210.89  Aligned_cols=177  Identities=18%  Similarity=0.212  Sum_probs=129.8

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC-------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK-------------------------------------------   95 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-------------------------------------------   95 (268)
                      ..++|...+.||+|+||.||+|....+++.||+|.+.                                           
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~   86 (296)
T 4hgt_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL   86 (296)
T ss_dssp             ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred             cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence            3478888999999999999999998899999999321                                           


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc---CCCCceee-eeccC--------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL---DNDMTTHV-EYGMG--------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill---~~~~~~~i-e~~~~--------  146 (268)
                                       +.....++.+++.||.|||+.+   ++||||||+||++   +.+...++ ||+.+        
T Consensus        87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~  163 (296)
T 4hgt_A           87 LGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART  163 (296)
T ss_dssp             CCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred             cCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence                             1456788999999999999988   9999999999999   56666655 44422        


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc-ch-hhHhhhhCccchhhhc
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL-GL-HNFVKMAVPDQISEVL  198 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~-~~-~~~~~~~~~~~~~~~~  198 (268)
                                                ..++.++||||||+++||+++|+.||........ .. ............... 
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (296)
T 4hgt_A          164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL-  242 (296)
T ss_dssp             CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHH-
T ss_pred             CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhh-
Confidence                                      2356789999999999999999999986433211 11 111111000000000 


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                              ....+..+.+++..||+.||++|||+.++++.|+.+.++..
T Consensus       243 ------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          243 ------------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             ------------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             ------------------------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence                                    00224568899999999999999999999999999988754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.96  E-value=7.9e-30  Score=211.48  Aligned_cols=173  Identities=12%  Similarity=0.106  Sum_probs=131.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  110 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA  110 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence            568888999999999999999988899999995532                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeee-ccCCCcCccccEee
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEY-GMGNQFSTNGDVYS  157 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~-~~~~~~~~~~Dv~s  157 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.++..++.+ +....++.++||||
T Consensus       111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~~~~~~~~~~Di~s  187 (286)
T 3uqc_A          111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPATMPDANPQDDIRG  187 (286)
T ss_dssp             ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCCCCTTCCHHHHHHH
T ss_pred             EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEeccccCCCCchhHHHH
Confidence                              235678999999999999998   99999999999999999888843 45567899999999


Q ss_pred             chHHHHHHHhCCCCCCcccccccchhhHhh-hhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHH
Q 044875          158 YGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVV  236 (268)
Q Consensus       158 ~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  236 (268)
                      ||+++||+++|+.||............... ......... ..                        ...+..+.+++..
T Consensus       188 lG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------------------~~~~~~l~~li~~  242 (286)
T 3uqc_A          188 IGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPAD-ID------------------------RDIPFQISAVAAR  242 (286)
T ss_dssp             HHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHH-HC------------------------TTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhh-cc------------------------cCCCHHHHHHHHH
Confidence            999999999999999864332110000000 000000000 00                        1334568899999


Q ss_pred             cCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          237 CSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       237 C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ||+.||++| |+.++++.|+.+....
T Consensus       243 ~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          243 SVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             HHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             HcccCCccC-CHHHHHHHHHHHhccC
Confidence            999999999 9999999999887543

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=5.9e-30  Score=219.25  Aligned_cols=181  Identities=22%  Similarity=0.291  Sum_probs=134.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCC-----CeEEEEeecC---------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPD-----QTVVSVRDFK---------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~-----~~~vavK~l~---------------------------------------   95 (268)
                      .++|...+.||+|+||.||+|.+..+     ++.||+|.+.                                       
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~  113 (364)
T 3op5_A           34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY  113 (364)
T ss_dssp             CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred             CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence            46788889999999999999998654     4789999421                                       


Q ss_pred             -------------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC--CC
Q 044875           96 -------------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD--ND  136 (268)
Q Consensus        96 -------------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~--~~  136 (268)
                                                           +.....++.+++.||.|||+.+   ++||||||+||+++  .+
T Consensus       114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~~~  190 (364)
T 3op5_A          114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYKNP  190 (364)
T ss_dssp             EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESSCT
T ss_pred             EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecCCC
Confidence                                                 1345789999999999999988   99999999999998  66


Q ss_pred             Cceee-eeccC----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccc
Q 044875          137 MTTHV-EYGMG----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG  181 (268)
Q Consensus       137 ~~~~i-e~~~~----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~  181 (268)
                      ...++ ||+.+                                  ..++.++||||||+++||+++|+.||...... ..
T Consensus       191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~~  269 (364)
T 3op5_A          191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-PK  269 (364)
T ss_dssp             TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HH
T ss_pred             CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-HH
Confidence            66666 55433                                  23677899999999999999999999853322 12


Q ss_pred             hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       182 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ............+.+++++.+...                   .++.++.+++..||+.||++||++.+|++.|+.+.+.
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          270 YVRDSKIRYRENIASLMDKCFPAA-------------------NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHSCTT-------------------CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHhcccc-------------------cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            222222222233444443322111                   3356688999999999999999999999999998876


Q ss_pred             Hh
Q 044875          262 LL  263 (268)
Q Consensus       262 ~~  263 (268)
                      ..
T Consensus       331 ~~  332 (364)
T 3op5_A          331 IG  332 (364)
T ss_dssp             TT
T ss_pred             cC
Confidence            43

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.96  E-value=9.8e-30  Score=215.28  Aligned_cols=191  Identities=20%  Similarity=0.259  Sum_probs=130.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+.  +++.||+|.+..                                            
T Consensus        13 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv   90 (336)
T 3g2f_A           13 DNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV   90 (336)
T ss_dssp             TSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred             HHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence            6777888999999999999987  689999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhc---------CCCCeeecCCCCCccccCCCCceee-eeccC
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHH---------SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~---------~~~~i~h~dlk~~nill~~~~~~~i-e~~~~  146 (268)
                                          .....++.+++.||.|||+.         +   ++||||||+||+++.++..++ ||+.+
T Consensus        91 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL~DFG~a  167 (336)
T 3g2f_A           91 MEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVISDFGLS  167 (336)
T ss_dssp             ECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred             EecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEEeeccce
Confidence                                23467899999999999998         6   999999999999999888777 55543


Q ss_pred             C------------------------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhh
Q 044875          147 N------------------------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN  184 (268)
Q Consensus       147 ~------------------------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~  184 (268)
                      .                                          .++.++||||||+++||+++|+.|+............
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  247 (336)
T 3g2f_A          168 MRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMA  247 (336)
T ss_dssp             EECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCT
T ss_pred             eecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHh
Confidence            1                                          2235789999999999999997776532221111100


Q ss_pred             Hh-hhhCccchhh---hcc-hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          185 FV-KMAVPDQISE---VLD-PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       185 ~~-~~~~~~~~~~---~~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      +. ..........   ... .......+...          ......+..+.+++..||+.||++|||++++++.|+++.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          248 FQTEVGNHPTFEDMQVLVSREKQRPKFPEAW----------KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             THHHHCSSCCHHHHHHHHTTSCCCCCCCTTC----------CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhcccCCCchHHHHHhhhcccccCCCCCccc----------ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence            00 0111110000   000 00000000000          001145677999999999999999999999999999999


Q ss_pred             HHHhhcc
Q 044875          260 STLLRCG  266 (268)
Q Consensus       260 ~~~~~~~  266 (268)
                      +.+.+..
T Consensus       318 ~~~~~~~  324 (336)
T 3g2f_A          318 MIWERNK  324 (336)
T ss_dssp             HCCCC--
T ss_pred             HHHHhcc
Confidence            8887654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=9.9e-30  Score=229.41  Aligned_cols=159  Identities=21%  Similarity=0.332  Sum_probs=123.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...++||+|+||.||+++...+|+.||+|.+.                                             
T Consensus       189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly  268 (689)
T 3v5w_A          189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS  268 (689)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence            67888899999999999999999999999999432                                             


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           96 ----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        96 ----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                            +.....++.+|+.||.|||+.+   |+||||||+|||++.++..++ |||++      
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~  345 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK  345 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence                                  2456788999999999999998   999999999999999998888 55533      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Cccchhhhcchhhhc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPDQISEVLDPLFVA  204 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~  204 (268)
                                          ..|+.++|+||+||++|||++|+.||.......  ........  .+..++.        
T Consensus       346 ~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~~~~~~~p~--------  415 (689)
T 3v5w_A          346 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMAVELPD--------  415 (689)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHHHCCCCCCT--------
T ss_pred             CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhcCCCCCCCc--------
Confidence                                357899999999999999999999997533221  11111111  1111111        


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVV  252 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~  252 (268)
                                          ..+.++.+++..|++.||.+|++     +++|.
T Consensus       416 --------------------~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          416 --------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             --------------------TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             --------------------cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence                                22345778999999999999998     56665

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=2.4e-29  Score=209.06  Aligned_cols=176  Identities=18%  Similarity=0.218  Sum_probs=131.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|+...+++.||+|.+..                                           
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~   87 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL   87 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence            4678888999999999999999988999999993321                                           


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC---CCCceee-eeccC---------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD---NDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~---~~~~~~i-e~~~~---------  146 (268)
                                       .....++.+++.||.|||+.+   ++||||||+||+++   .+...++ +|+.+         
T Consensus        88 ~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  164 (296)
T 3uzp_A           88 GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH  164 (296)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence                             346789999999999999988   99999999999994   5555555 44322         


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccc-cc-hhhHhhhhCccchhhhcc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG-LG-LHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~-~~-~~~~~~~~~~~~~~~~~d  199 (268)
                                               ..++.++||||||+++||+++|+.||....... .. +..............   
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---  241 (296)
T 3uzp_A          165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV---  241 (296)
T ss_dssp             CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHH---
T ss_pred             cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHH---
Confidence                                     235678999999999999999999998643221 11 111111110000000   


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                        +                    ....+..+.+++..||+.||++|||+.++++.|+.+.++..
T Consensus       242 --~--------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          242 --L--------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             --H--------------------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             --H--------------------HhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence              0                    01234568899999999999999999999999999987754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=2.3e-29  Score=209.40  Aligned_cols=175  Identities=17%  Similarity=0.169  Sum_probs=131.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   89 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   89 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEecC
Confidence            56888899999999999999988899999999332                                             


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-----eee-eeccC--------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-----THV-EYGMG--------  146 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-----~~i-e~~~~--------  146 (268)
                                     ......++.+++.||.|||+.+   ++||||||+||+++.+..     .++ +|+.+        
T Consensus        90 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~  166 (298)
T 1csn_A           90 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  166 (298)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence                           1456789999999999999988   999999999999987654     555 44422        


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc-c-hhhHhhhhCccchhhhc
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL-G-LHNFVKMAVPDQISEVL  198 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~-~-~~~~~~~~~~~~~~~~~  198 (268)
                                                ..++.++||||||++++|+++|+.||........ . +.............+. 
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-  245 (298)
T 1csn_A          167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL-  245 (298)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH-
T ss_pred             cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHH-
Confidence                                      2357789999999999999999999986432111 0 1111111000000000 


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                              ....+..+.+++..||+.||++||++++|++.|+++.+...
T Consensus       246 ------------------------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          246 ------------------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             ------------------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             ------------------------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence                                    00234568899999999999999999999999999987654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.3e-28  Score=208.35  Aligned_cols=182  Identities=21%  Similarity=0.322  Sum_probs=129.1

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|+.  .++.||+|.+..                                          
T Consensus        35 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l  112 (337)
T 3mdy_A           35 IAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYL  112 (337)
T ss_dssp             HHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEE
T ss_pred             cccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEE
Confidence            346788899999999999999998  489999993321                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcC-----CCCeeecCCCCCccccCCCCceee-eeccCC--
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHS-----EKPIVHCDSKPSNILLDNDMTTHV-EYGMGN--  147 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~-----~~~i~h~dlk~~nill~~~~~~~i-e~~~~~--  147 (268)
                                           .....++.+++.||.|||+..     ...++||||||+||+++.++..++ ||+.+.  
T Consensus       113 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~  192 (337)
T 3mdy_A          113 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF  192 (337)
T ss_dssp             EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence                                 345678999999999999870     112999999999999998888877 555331  


Q ss_pred             -----------------------------CcCc------cccEeechHHHHHHHhC----------CCCCCcccccccch
Q 044875          148 -----------------------------QFST------NGDVYSYGKLLLEIFTG----------KRSTSDMFTEGLGL  182 (268)
Q Consensus       148 -----------------------------~~~~------~~Dv~s~G~vl~el~tg----------~~p~~~~~~~~~~~  182 (268)
                                                   ..+.      ++||||||+++||+++|          ..||..........
T Consensus       193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~  272 (337)
T 3mdy_A          193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY  272 (337)
T ss_dssp             C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred             ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence                                         1122      38999999999999999          55554433322222


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ...............+....                   ...+++..+.+++..||+.||++|||+.++++.|+.+.+.
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          273 EDMREIVCIKKLRPSFPNRW-------------------SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             HHHHHHHTTSCCCCCCCGGG-------------------GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             hhhHHHHhhhccCccccccc-------------------hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            22222111111111111000                   0126778899999999999999999999999999998764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.95  E-value=5.2e-29  Score=219.08  Aligned_cols=167  Identities=25%  Similarity=0.387  Sum_probs=129.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|.+.  ++.||||.+..                                           
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~  269 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM  269 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence            356777889999999999999984  78999994432                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+          
T Consensus       270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~  346 (450)
T 1k9a_A          270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG  346 (450)
T ss_dssp             TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCC
Confidence                               235678999999999999988   999999999999999888877 45432          


Q ss_pred             --------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ..++.++||||||+++||+++ |+.||......  ........+....            .     
T Consensus       347 ~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~------------~-----  407 (450)
T 1k9a_A          347 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMD------------A-----  407 (450)
T ss_dssp             CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTCCCC------------C-----
T ss_pred             CCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC------------C-----
Confidence                          457889999999999999998 99999864322  1112221111100            0     


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                 +..++..+.+++..||+.||++|||+.++++.|+.+...
T Consensus       408 -----------p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          408 -----------PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             -----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             -----------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence                       013456688999999999999999999999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=1.4e-29  Score=213.81  Aligned_cols=168  Identities=20%  Similarity=0.433  Sum_probs=124.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeE----EEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTV----VSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.    ||+|.+..                                        
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v   94 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence            5677788999999999999998666654    57874321                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.        
T Consensus        95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence                                  345778999999999999988   999999999999999888777 3332        


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           +..++.++||||||+++||+++ |+.||......  .+............         
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~~~---------  240 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQ---------  240 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCC---------
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcCCCCCC---------
Confidence                                 2346789999999999999999 99999753222  12222221111100         


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                         .                ..+...+..++..||+.||++|||+.++++.|+.+.+.
T Consensus       241 ---~----------------~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          241 ---P----------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             ---C----------------TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             ---C----------------ccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence               0                12345688899999999999999999999999988753

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=5.6e-29  Score=209.67  Aligned_cols=176  Identities=21%  Similarity=0.295  Sum_probs=130.1

Q ss_pred             cccccCHHHHHHHhCC----------CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------
Q 044875           47 LLLNISYESLLKATGG----------FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------   96 (268)
Q Consensus        47 ~~~~~~~~~l~~~~~~----------f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------   96 (268)
                      ....+++++++.+++.          |...+.||+|+||.||+|....+|+.||||.+..                    
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~  100 (321)
T 2c30_A           21 QSGVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ  100 (321)
T ss_dssp             ----CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC
T ss_pred             cCCcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC
Confidence            3456899999988865          4556689999999999999988899999994321                    


Q ss_pred             ----------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC
Q 044875           97 ----------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND  136 (268)
Q Consensus        97 ----------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~  136 (268)
                                                              .....++.+++.||.|||+.+   ++||||||+||+++.+
T Consensus       101 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~  177 (321)
T 2c30_A          101 HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLD  177 (321)
T ss_dssp             CTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTT
T ss_pred             CCCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCC
Confidence                                                    446789999999999999988   9999999999999988


Q ss_pred             Cceee-eecc---------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          137 MTTHV-EYGM---------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       137 ~~~~i-e~~~---------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                      +..++ ||+.                           ...++.++||||||++++|+++|+.||......  ........
T Consensus       178 ~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~~  255 (321)
T 2c30_A          178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRD  255 (321)
T ss_dssp             CCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH
T ss_pred             CcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc
Confidence            87777 4442                           234678899999999999999999999753221  11111111


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+.....                          ....+..+.+++..||+.||++|||+.++++
T Consensus       256 ~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          256 SPPPKLKN--------------------------SHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             SSCCCCTT--------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCCCCcCc--------------------------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            11110000                          0022345788999999999999999999985

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.95  E-value=4.6e-29  Score=210.51  Aligned_cols=167  Identities=23%  Similarity=0.410  Sum_probs=126.2

Q ss_pred             CCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~------------------------------------------   96 (268)
                      +|...+.||+|+||.||+|.+..+   +..||+|.+..                                          
T Consensus        50 ~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  129 (325)
T 3kul_A           50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT  129 (325)
T ss_dssp             GEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEE
T ss_pred             HeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEe
Confidence            455568899999999999999644   44599994432                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+        
T Consensus       130 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  206 (325)
T 3kul_A          130 EYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD  206 (325)
T ss_dssp             ECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC----
T ss_pred             eCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccccCcc
Confidence                                 346788999999999999988   999999999999999888777 44432        


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |..||.......  ............          
T Consensus       207 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~~~~~----------  274 (325)
T 3kul_A          207 AAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD--VISSVEEGYRLP----------  274 (325)
T ss_dssp             CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHH--HHHHHHTTCCCC----------
T ss_pred             ceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHH--HHHHHHcCCCCC----------
Confidence                                  235678999999999999999 999997532221  111111111000          


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                        .                +..++..+.+++..||+.||++|||+.+|++.|+.+.+.
T Consensus       275 --~----------------~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          275 --A----------------PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             --C----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             --C----------------CCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence              0                013345688999999999999999999999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.95  E-value=2.8e-29  Score=221.13  Aligned_cols=172  Identities=21%  Similarity=0.394  Sum_probs=131.3

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      ++....++|...+.||+|+||.||+|.+. ++..||||.+..                                      
T Consensus       182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv  260 (454)
T 1qcf_A          182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYII  260 (454)
T ss_dssp             CSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEE
T ss_pred             ceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEE
Confidence            34445567778889999999999999996 578899995432                                      


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+|||++.+...++ ||+.+      
T Consensus       261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~  337 (454)
T 1qcf_A          261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDN  337 (454)
T ss_dssp             ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred             EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence                                   235678999999999999988   999999999999999888877 44432      


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |+.||......  .+...........          
T Consensus       338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~----------  405 (454)
T 1qcf_A          338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERGYRMP----------  405 (454)
T ss_dssp             HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHTCCCC----------
T ss_pred             ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC----------
Confidence                                  346789999999999999999 99999753221  1111111111000          


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                        .                +..++..+.+++..||+.||++|||+.+|+..|+.+..
T Consensus       406 --~----------------~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          406 --R----------------PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             --C----------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             --C----------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence              0                01345668899999999999999999999999988753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.95  E-value=5.2e-29  Score=207.63  Aligned_cols=163  Identities=18%  Similarity=0.320  Sum_probs=123.8

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            3578888999999999999999988999999994321                                           


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.             
T Consensus        99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  175 (297)
T 3fxz_A           99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST  175 (297)
T ss_dssp             CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCC
T ss_pred             CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCC
Confidence                             346788999999999999988   999999999999998887777 4543             


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..++.++||||+|+++||+++|+.||........ .........+. .   ..            
T Consensus       176 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~-~---~~------------  238 (297)
T 3fxz_A          176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPE-L---QN------------  238 (297)
T ss_dssp             CCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHHCSCC-C---SC------------
T ss_pred             ccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhCCCCC-C---CC------------
Confidence                          23467899999999999999999999975322111 11111111110 0   00            


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                 +...+..+.+++..||+.||++|||++++++
T Consensus       239 -----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          239 -----------PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             -----------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----------ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence                       0123445788999999999999999999975

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=9.3e-30  Score=213.48  Aligned_cols=158  Identities=23%  Similarity=0.322  Sum_probs=120.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.+..                                            
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            567788899999999999999988999999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..         
T Consensus       137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~  213 (311)
T 3p1a_A          137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAG  213 (311)
T ss_dssp             ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred             eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccCCCC
Confidence                                345678999999999999988   999999999999998887777 44432         


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      +.++.++||||||+++||+++|..|+.....    .........+        +...       
T Consensus       214 ~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~----~~~~~~~~~~--------~~~~-------  274 (311)
T 3p1a_A          214 EVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG----WQQLRQGYLP--------PEFT-------  274 (311)
T ss_dssp             -CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----HHHHTTTCCC--------HHHH-------
T ss_pred             cccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH----HHHHhccCCC--------cccc-------
Confidence                            2467899999999999999999776653211    1111111001        0000       


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ......+.+++..||+.||++|||++++++
T Consensus       275 -------------~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          275 -------------AGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             -------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -------------cCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                         123456888999999999999999999985

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.95  E-value=3.6e-29  Score=215.05  Aligned_cols=168  Identities=25%  Similarity=0.475  Sum_probs=126.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+..   .++..||+|.+..                                         
T Consensus        45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  124 (373)
T 2qol_A           45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV  124 (373)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred             hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence            46888899999999999999875   4577899995432                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+       
T Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~  201 (373)
T 2qol_A          125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP  201 (373)
T ss_dssp             EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred             EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence                                  345778999999999999988   999999999999999888877 44422       


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             ..++.++||||||+++||+++ |+.||......  .+.........           
T Consensus       202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~--~~~~~i~~~~~-----------  268 (373)
T 2qol_A          202 EAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ--DVIKAVDEGYR-----------  268 (373)
T ss_dssp             ------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH--HHHHHHHTTEE-----------
T ss_pred             ccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC-----------
Confidence                                   346778999999999999998 99999753221  11111111100           


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                       ...                +..++..+.+++..||+.||++||++.+|++.|+.+.+.
T Consensus       269 -~~~----------------~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          269 -LPP----------------PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             -CCC----------------CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             -CCC----------------CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence             000                013455688999999999999999999999999998764

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.95  E-value=1.1e-28  Score=211.75  Aligned_cols=131  Identities=21%  Similarity=0.383  Sum_probs=99.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CCc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQF  149 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~  149 (268)
                      ..++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+                             ..+
T Consensus       206 ~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  282 (370)
T 2psq_A          206 VSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  282 (370)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCC
T ss_pred             HHHHHHHHHHHHHHHhCC---eeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCC
Confidence            457889999999999988   999999999999999888877 44432                             346


Q ss_pred             CccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHH
Q 044875          150 STNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI  228 (268)
Q Consensus       150 ~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (268)
                      +.++||||||+++||+++ |..||......  .+............                            +..++.
T Consensus       283 ~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~~~----------------------------~~~~~~  332 (370)
T 2psq_A          283 THQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFKLLKEGHRMDK----------------------------PANCTN  332 (370)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCCC----------------------------CTTSCH
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhcCCCCCC----------------------------CCCCCH
Confidence            788999999999999999 99999753221  11111111111000                            013345


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       229 ~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      .+.+++..||+.||++||++.++++.|+.+.....
T Consensus       333 ~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~  367 (370)
T 2psq_A          333 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTT  367 (370)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            68899999999999999999999999999886543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=7.7e-29  Score=209.50  Aligned_cols=175  Identities=17%  Similarity=0.213  Sum_probs=128.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELLG   88 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECCC
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeCC
Confidence            67888899999999999999998899999999432                                             


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-----eee-eeccC--------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-----THV-EYGMG--------  146 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-----~~i-e~~~~--------  146 (268)
                                     +.....++.+++.||.|||+.+   ++||||||+||+++.+..     .++ ||+.+        
T Consensus        89 ~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~  165 (330)
T 2izr_A           89 PSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET  165 (330)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence                           1345789999999999999988   999999999999998765     555 44432        


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                                ..++.++||||||+++||+++|+.||.......  ................ ..
T Consensus       166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~~~~~-~~  242 (330)
T 2izr_A          166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDTKRATP-IE  242 (330)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHHHHHSC-HH
T ss_pred             CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhhhccCC-HH
Confidence                                      235678999999999999999999998643221  1111111000000000 00


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      .+                    ....+ ++.+++..||+.||.+||++.+|.+.|+++.+..
T Consensus       243 ~~--------------------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          243 VL--------------------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HH--------------------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HH--------------------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            00                    00123 7899999999999999999999999999887764

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=9.8e-30  Score=211.57  Aligned_cols=184  Identities=23%  Similarity=0.351  Sum_probs=129.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|++    ..+++.||+|.+..                                        
T Consensus        10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   89 (295)
T 3ugc_A           10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK   89 (295)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred             HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence            5567778999999999999984    55789999994332                                        


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+     
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence                                    345678999999999999988   999999999999998887777 44432     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccc-hhhhcch
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQ-ISEVLDP  200 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~  200 (268)
                                               ..++.++||||||+++||+++|..|+......   ............ .......
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred             CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccccchhHHHHHH
Confidence                                     34577899999999999999999988643211   000000000000 0000000


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      .+....            ....+..++..+.+++..||+.||++|||+.++++.|+.+.+.+
T Consensus       244 ~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          244 LLKNNG------------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHTTC------------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHhccC------------cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            000000            00011244567899999999999999999999999999998754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=1.8e-28  Score=216.83  Aligned_cols=175  Identities=19%  Similarity=0.240  Sum_probs=130.5

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||+|....+++.||||.+.                                            
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~   85 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL   85 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence            367888999999999999999998889999999322                                            


Q ss_pred             ----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc---CCCCceee-eeccC---------
Q 044875           96 ----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL---DNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 ----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill---~~~~~~~i-e~~~~---------  146 (268)
                                      +.....++.+++.||.|||+.+   ++||||||+|||+   +.+...++ ||+..         
T Consensus        86 g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~  162 (483)
T 3sv0_A           86 GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH  162 (483)
T ss_dssp             CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred             CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccc
Confidence                            1456789999999999999988   9999999999999   45565655 44432         


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCccchhhhcc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d  199 (268)
                                               ..++.++||||||+++||+++|+.||........  .+..............+  
T Consensus       163 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l--  240 (483)
T 3sv0_A          163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEAL--  240 (483)
T ss_dssp             CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHH--
T ss_pred             cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHH--
Confidence                                     2356789999999999999999999986433211  01111111000000000  


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                             ...++.++.+++..||+.||++||++.+|++.|+.+....
T Consensus       241 -----------------------~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          241 -----------------------CRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             -----------------------HTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             -----------------------hcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence                                   0123456899999999999999999999999999987654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.95  E-value=4.6e-29  Score=209.10  Aligned_cols=173  Identities=27%  Similarity=0.392  Sum_probs=129.0

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------   96 (268)
                      +....++|...+.||+|+||.||+|..  ++..||+|.+..                                       
T Consensus        32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~  109 (309)
T 3p86_A           32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL  109 (309)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred             ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence            333446777888999999999999988  588899994322                                       


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.||.|||+.+ .+++||||||+||+++.++..++ +|+.+  
T Consensus       110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred             EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence                                       345678999999999999875 45999999999999999888777 44432  


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-hhCccchhhhcch
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAVPDQISEVLDP  200 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~  200 (268)
                                               ..++.++||||||+++||+++|+.||.......  ...... .......+     
T Consensus       189 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~~~~~~~~~-----  261 (309)
T 3p86_A          189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGFKCKRLEIP-----  261 (309)
T ss_dssp             -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHHSCCCCCCC-----
T ss_pred             ccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhcCCCCCCC-----
Confidence                                     346789999999999999999999997532221  111110 00000000     


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                             ......+.+++..||+.||++|||+.++++.|+.+.+.
T Consensus       262 -----------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          262 -----------------------RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             -----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             -----------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence                                   12334578899999999999999999999999988754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=7.1e-29  Score=209.33  Aligned_cols=168  Identities=21%  Similarity=0.428  Sum_probs=126.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeE----EEEeecC-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTV----VSVRDFK-----------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~l~-----------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.    +|+|.+.                                         
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v   92 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV   92 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence            4567778899999999999998767665    7777321                                         


Q ss_pred             ---------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           96 ---------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        96 ---------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                           +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+       
T Consensus        93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence                                 1456788999999999999998   999999999999998887777 44432       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |+.||......  ................       
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~-------  240 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKGERLAQPQ-------  240 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTTCBCCCCT-------
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCCCCCC-------
Confidence                                  346778999999999999999 99999753221  1222222111111111       


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                           .+...+.+++..||+.||++|||+.++++.|+.+...
T Consensus       241 ---------------------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          241 ---------------------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             ---------------------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             ---------------------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence                                 1223467889999999999999999999999987643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=5.3e-29  Score=212.64  Aligned_cols=132  Identities=21%  Similarity=0.384  Sum_probs=98.6

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      ...++.+++.||+|||+.+   ++||||||+||+++.++..++ ||+.+                             ..
T Consensus       195 ~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  271 (359)
T 3vhe_A          195 LICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRV  271 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCC
Confidence            3458889999999999988   999999999999998877777 44432                             34


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++||||||+++||+++ |..||....... .+............+.                            ...
T Consensus       272 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~----------------------------~~~  322 (359)
T 3vhe_A          272 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPD----------------------------YTT  322 (359)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCCCCCT----------------------------TCC
T ss_pred             CCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCCCCCC----------------------------CCC
Confidence            6789999999999999998 999997533221 1111111111111110                            223


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ..+.+++..||+.||++|||+.++++.|+++.+..
T Consensus       323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            45788999999999999999999999999998754

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.95  E-value=8.1e-29  Score=212.43  Aligned_cols=169  Identities=23%  Similarity=0.401  Sum_probs=124.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+     ..++..||+|.+..                                       
T Consensus        71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~  150 (367)
T 3l9p_A           71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  150 (367)
T ss_dssp             GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence            5677778899999999999995     34577899995532                                       


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-e
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-E  142 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e  142 (268)
                                                    .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ |
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEECC
Confidence                                          234578999999999999998   99999999999998544   3555 4


Q ss_pred             ecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCcc
Q 044875          143 YGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       143 ~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                      |+.                             +..++.++||||||+++||+++ |..||......  .+..........
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~--~~~~~i~~~~~~  305 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRM  305 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCCC
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC
Confidence            432                             2346789999999999999998 99999753221  111111111110


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ..            .                ..++..+.+++..||+.||++|||+.+|++.|+.+.+..
T Consensus       306 ~~------------~----------------~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~  347 (367)
T 3l9p_A          306 DP------------P----------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  347 (367)
T ss_dssp             CC------------C----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             CC------------C----------------ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence            00            0                133455889999999999999999999999999887643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.95  E-value=3.6e-29  Score=222.52  Aligned_cols=168  Identities=21%  Similarity=0.391  Sum_probs=128.8

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|.+..++..||+|.+..                                          
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~  297 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF  297 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence            34567777899999999999999987799999995432                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+|||++.+...++ ||+.+         
T Consensus       298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  374 (495)
T 1opk_A          298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT  374 (495)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred             cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence                                234678899999999999988   999999999999998877777 44432         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         ..++.++||||||+++||+++ |..||......  .+..........            ..
T Consensus       375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~------------~~  440 (495)
T 1opk_A          375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRM------------ER  440 (495)
T ss_dssp             CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCC------------CC
T ss_pred             ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC------------CC
Confidence                               235678999999999999999 99999754322  111111111110            00


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                      +..++..+.+++..||+.||++|||+.+|++.|+.+.
T Consensus       441 ----------------~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          441 ----------------PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             ----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             ----------------CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence                            1134566889999999999999999999999998763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=1.1e-28  Score=204.40  Aligned_cols=169  Identities=25%  Similarity=0.483  Sum_probs=127.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l   98 (287)
T 4f0f_A           19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM   98 (287)
T ss_dssp             TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred             ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence            677788899999999999999988999999995521                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-----eee-eeccC-
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-----THV-EYGMG-  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-----~~i-e~~~~-  146 (268)
                                             .....++.+++.|+.|||+.+ .+++||||||+||+++.+..     .++ ||+.+ 
T Consensus        99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~  177 (287)
T 4f0f_A           99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ  177 (287)
T ss_dssp             EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred             EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence                                   345678999999999999865 45999999999999987654     444 44322 


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-hhCccchhhhcch
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-MAVPDQISEVLDP  200 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~  200 (268)
                                               ..++.++||||+|+++||+++|+.||............... ........     
T Consensus       178 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----  252 (287)
T 4f0f_A          178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP-----  252 (287)
T ss_dssp             CCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCC-----
T ss_pred             cccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCC-----
Confidence                                     23567899999999999999999999754332221111111 11111111     


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                             ..++..+.+++..||+.||++|||+.++++.|+++
T Consensus       253 -----------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          253 -----------------------EDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             -----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             -----------------------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence                                   13345688999999999999999999999999864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.5e-28  Score=205.76  Aligned_cols=172  Identities=22%  Similarity=0.418  Sum_probs=125.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|..  .++.||+|.+..                                            
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~   85 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS   85 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred             hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence            4566778899999999999998  478899994432                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc-eee-eeccC------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT-THV-EYGMG------------  146 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~-~~i-e~~~~------------  146 (268)
                                      .....++.++++||.|||+.+...++||||||+||+++.+.. .++ +|+.+            
T Consensus        86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~g  165 (307)
T 2eva_A           86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKG  165 (307)
T ss_dssp             HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------C
T ss_pred             HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCC
Confidence                            234678889999999999933233999999999999987765 455 45432            


Q ss_pred             ------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          147 ------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       147 ------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                  ..++.++||||||++++|+++|+.||.......................                   
T Consensus       166 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------  226 (307)
T 2eva_A          166 SAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI-------------------  226 (307)
T ss_dssp             CTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCB-------------------
T ss_pred             CCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcc-------------------
Confidence                        3567899999999999999999999975322211111111111110000                   


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                               ...+..+.+++..||+.||++|||+.++++.|+.+.+.+
T Consensus       227 ---------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          227 ---------KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             ---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             ---------cccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence                     023445788999999999999999999999999887543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.95  E-value=5.6e-29  Score=210.18  Aligned_cols=168  Identities=19%  Similarity=0.428  Sum_probs=127.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeE----EEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTV----VSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~----vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.    +|+|.+..                                        
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v   94 (327)
T 3lzb_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   94 (327)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred             hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence            6788889999999999999998766665    46663321                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+       
T Consensus        95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence                                  345778999999999999988   999999999999998887777 44432       


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |..||......  .+.............        
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~~~~~~~~~~--------  241 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQP--------  241 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCC--------
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCCCCCC--------
Confidence                                  346789999999999999999 99999753322  122222211111000        


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                          ..++..+.+++..||+.||++|||+.++++.|+.+.+.
T Consensus       242 --------------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  279 (327)
T 3lzb_A          242 --------------------PICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             --------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred             --------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence                                02344588899999999999999999999999998754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.95  E-value=2.9e-28  Score=204.07  Aligned_cols=172  Identities=19%  Similarity=0.282  Sum_probs=126.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  111 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL  111 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence            567888999999999999999988899999995431                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.      
T Consensus       112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~  188 (310)
T 2wqm_A          112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS  188 (310)
T ss_dssp             ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred             ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence                                    234578899999999999988   999999999999998877776 3432      


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ...++.++||||||+++||+++|..||.........+.........   ....      
T Consensus       189 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~------  259 (310)
T 2wqm_A          189 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY---PPLP------  259 (310)
T ss_dssp             ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS---CCCC------
T ss_pred             CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC---CCCc------
Confidence                                 2346788999999999999999999987532211111111111100   0000      


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                        .                ...+..+.+++..||+.||++|||+.+|++.|+.+....
T Consensus       260 --~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~  299 (310)
T 2wqm_A          260 --S----------------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT  299 (310)
T ss_dssp             --T----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             --c----------------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence              0                023456888999999999999999999999999998764

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=7.5e-28  Score=204.08  Aligned_cols=181  Identities=22%  Similarity=0.324  Sum_probs=131.8

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||+|..  +++.||+|.+..                                         
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred             cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeE
Confidence            3446788889999999999999998  589999994432                                         


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHh--------hcCCCCeeecCCCCCccccCCCCceee-eecc
Q 044875           97 ----------------------CTRLSIAIDVASALEYLH--------HHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh--------~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~  145 (268)
                                            .....++.+++.||.|||        +.+   ++||||||+||+++.++..++ +|+.
T Consensus       117 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~  193 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIADLGL  193 (342)
T ss_dssp             EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             EEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEEEEECCC
Confidence                                  345788999999999999        666   999999999999998888777 4443


Q ss_pred             CC-------------------------------------CcCccccEeechHHHHHHHhC----------CCCCCccccc
Q 044875          146 GN-------------------------------------QFSTNGDVYSYGKLLLEIFTG----------KRSTSDMFTE  178 (268)
Q Consensus       146 ~~-------------------------------------~~~~~~Dv~s~G~vl~el~tg----------~~p~~~~~~~  178 (268)
                      +.                                     .++.++||||||+++||+++|          ..||......
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          194 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             CEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred             ceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcC
Confidence            20                                     122579999999999999999          5676654333


Q ss_pred             ccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          179 GLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       179 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                      ......+............+....                   ...++...+.+++..||+.||++|||+.+|++.|+.+
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i  334 (342)
T 1b6c_B          274 DPSVEEMRKVVCEQKLRPNIPNRW-------------------QSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL  334 (342)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGG-------------------GTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCCCCcccc-------------------cchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence            222222222211111111110000                   0126677899999999999999999999999999999


Q ss_pred             HHHH
Q 044875          259 KSTL  262 (268)
Q Consensus       259 ~~~~  262 (268)
                      .++.
T Consensus       335 ~~~~  338 (342)
T 1b6c_B          335 SQQE  338 (342)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            8753

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.95  E-value=2.4e-28  Score=201.79  Aligned_cols=172  Identities=20%  Similarity=0.358  Sum_probs=127.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecCc----------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~----------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....   .+..+|+|.+..                                        
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv   93 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII   93 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence            3567778899999999999999853   356799994322                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+       
T Consensus        94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  170 (281)
T 1mp8_A           94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST  170 (281)
T ss_dssp             EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred             EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCccc
Confidence                                  345678899999999999988   999999999999998877776 44422       


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ..++.++||||||+++||+++ |..||......  ...............         
T Consensus       171 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~~~~~---------  239 (281)
T 1mp8_A          171 YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMP---------  239 (281)
T ss_dssp             --------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCC---------
T ss_pred             ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCCCCCC---------
Confidence                                 345778999999999999997 99999753322  111111111100000         


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                         ...+..+.+++..||+.||++|||+.++++.|+.+.+...+
T Consensus       240 -------------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  280 (281)
T 1mp8_A          240 -------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKA  280 (281)
T ss_dssp             -------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhcc
Confidence                               13345688899999999999999999999999999876543

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.95  E-value=1.4e-28  Score=221.63  Aligned_cols=163  Identities=17%  Similarity=0.223  Sum_probs=121.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+|+.||+|.+..                                            
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~  236 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  236 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence            567888899999999999999998999999993321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC--Cceee-eecc----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--MTTHV-EYGM----------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~--~~~~i-e~~~----------  145 (268)
                                        .....++.|++.||.|||+++   ++||||||+|||++.+  ...++ |||+          
T Consensus       237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~  313 (573)
T 3uto_A          237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV  313 (573)
T ss_dssp             CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred             CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence                              345678999999999999998   9999999999999864  44555 4443          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      +..|+.++||||+||++|||++|+.||.+....  .....+...... +..   + ..      
T Consensus       314 ~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~--~~~~~i~~~~~~-~~~---~-~~------  380 (573)
T 3uto_A          314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD--ETLRNVKSCDWN-MDD---S-AF------  380 (573)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCCC-CCS---G-GG------
T ss_pred             eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHhCCCC-CCc---c-cc------
Confidence                            345788999999999999999999999753221  111111111000 000   0 00      


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ......+.+++..||+.||.+|||+.|+++
T Consensus       381 --------------~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          381 --------------SGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             --------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --------------cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                          022345778899999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=2e-28  Score=203.11  Aligned_cols=169  Identities=28%  Similarity=0.481  Sum_probs=125.6

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|...   ..+|+|.+..                                           
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e   99 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   99 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             ccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEE
Confidence            367888899999999999999874   2489884421                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+.          
T Consensus       100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  176 (289)
T 3og7_A          100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS  176 (289)
T ss_dssp             CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred             ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceecccccccccc
Confidence                                345688999999999999988   999999999999998887776 4442          


Q ss_pred             ----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhh
Q 044875          146 ----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLF  202 (268)
Q Consensus       146 ----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~  202 (268)
                                            ...++.++||||+|++++|+++|+.||........ +........ .......     
T Consensus       177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~-----  250 (289)
T 3og7_A          177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIEMVGRGSLSPDLSKV-----  250 (289)
T ss_dssp             -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHH-HHHHHHHTSCCCCTTSS-----
T ss_pred             ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHH-HHHHhcccccCcchhhc-----
Confidence                                  23456689999999999999999999975432211 111111111 1111100     


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                          ...++..+.+++..||+.||++|||+.++++.|+++.+
T Consensus       251 --------------------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          251 --------------------RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             --------------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             --------------------cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence                                01345668899999999999999999999999998753

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=1.6e-28  Score=201.32  Aligned_cols=168  Identities=17%  Similarity=0.264  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|+.  ++..+|+|.+.                                             
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (271)
T 3kmu_A           10 KQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI   87 (271)
T ss_dssp             GGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred             HHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence            5677778999999999999998  48889999432                                             


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           96 ----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        96 ----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                            +.....++.+++.||.|||+.+ .+++||||||+||+++.++..++ +++.+      
T Consensus        88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~  166 (271)
T 3kmu_A           88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP  166 (271)
T ss_dssp             EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT
T ss_pred             ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeeccc
Confidence                                  1356789999999999999865 55999999999999999888777 22211      


Q ss_pred             ----------------C---CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ----------------N---QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ----------------~---~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                      .   .++.++||||||+++||+++|+.||........ .............+            
T Consensus       167 ~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~------------  233 (271)
T 3kmu_A          167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALEGLRPTIP------------  233 (271)
T ss_dssp             TCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHSCCCCCCC------------
T ss_pred             CccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhcCCCCCCC------------
Confidence                            1   122379999999999999999999975322211 11111111111100            


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                      ...+..+.+++..||+.||++|||++++++.|+.+.+
T Consensus       234 ----------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          234 ----------------PGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             ----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence                            0234458889999999999999999999999998864

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=1.2e-28  Score=207.48  Aligned_cols=173  Identities=24%  Similarity=0.430  Sum_probs=124.8

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCe---EEEEeecCc------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQT---VVSVRDFKP------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~---~vavK~l~~------------------------------------   96 (268)
                      +....++|...+.||+|+||.||+|....++.   .||+|.+..                                    
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   97 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS   97 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence            33445778888999999999999999875554   799994321                                    


Q ss_pred             ---------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC
Q 044875           97 ---------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM  137 (268)
Q Consensus        97 ---------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~  137 (268)
                                                             .....++.+++.||.|||+.+   ++||||||+||+++.++
T Consensus        98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~  174 (323)
T 3qup_A           98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDM  174 (323)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTS
T ss_pred             ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCC
Confidence                                                   235678899999999999988   99999999999999988


Q ss_pred             ceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHh
Q 044875          138 TTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFV  186 (268)
Q Consensus       138 ~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~  186 (268)
                      ..++ ||+.+                             ..++.++||||||+++||+++ |..||......  ......
T Consensus       175 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~--~~~~~~  252 (323)
T 3qup_A          175 TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENA--EIYNYL  252 (323)
T ss_dssp             CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHH
T ss_pred             CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChH--HHHHHH
Confidence            7777 45432                             236789999999999999999 89998753222  111111


Q ss_pred             hhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       187 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ........                            +...+..+.+++..||+.||++|||+.++++.|+++.+.
T Consensus       253 ~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          253 IGGNRLKQ----------------------------PPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HTTCCCCC----------------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             hcCCCCCC----------------------------CCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            11110000                            013345688999999999999999999999999998754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.95  E-value=1.3e-28  Score=208.29  Aligned_cols=178  Identities=23%  Similarity=0.335  Sum_probs=131.3

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCC-----eEEEEeecCc---------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQ-----TVVSVRDFKP---------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~-----~~vavK~l~~---------------------------------   96 (268)
                      ++....++|...+.||+|+||.||+|....++     ..||+|.+..                                 
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  119 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC  119 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            34444578888899999999999999986544     3799994322                                 


Q ss_pred             --------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccc
Q 044875           97 --------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNIL  132 (268)
Q Consensus        97 --------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nil  132 (268)
                                                                  .....++.+++.||.|||+.+   ++||||||+||+
T Consensus       120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl  196 (333)
T 2i1m_A          120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVL  196 (333)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCE
T ss_pred             ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEE
Confidence                                                        123567889999999999988   999999999999


Q ss_pred             cCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccc
Q 044875          133 LDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLG  181 (268)
Q Consensus       133 l~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~  181 (268)
                      ++.++..++ ||+.+                             ..++.++||||||+++||+++ |..||....... .
T Consensus       197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~  275 (333)
T 2i1m_A          197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-K  275 (333)
T ss_dssp             EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-H
T ss_pred             ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-H
Confidence            998877666 44322                             346778999999999999998 999987532221 1


Q ss_pred             hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       182 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .............            +                ...+..+.+++..||+.||.+|||+.++++.|+++.++
T Consensus       276 ~~~~~~~~~~~~~------------~----------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          276 FYKLVKDGYQMAQ------------P----------------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             HHHHHHHTCCCCC------------C----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCC------------C----------------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence            1111111111000            0                02245578899999999999999999999999999877


Q ss_pred             Hhh
Q 044875          262 LLR  264 (268)
Q Consensus       262 ~~~  264 (268)
                      ..+
T Consensus       328 ~~~  330 (333)
T 2i1m_A          328 DRR  330 (333)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.95  E-value=2.1e-28  Score=209.09  Aligned_cols=129  Identities=25%  Similarity=0.416  Sum_probs=105.3

Q ss_pred             ccccccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------
Q 044875           44 RKDLLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------   96 (268)
Q Consensus        44 ~~~~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------   96 (268)
                      ..+....+++.+-....++|...+.||+|+||.||+|....+++.||+|.+..                           
T Consensus        18 ~~~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~   97 (360)
T 3llt_A           18 GDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNN   97 (360)
T ss_dssp             --CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGG
T ss_pred             cCccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCC
Confidence            34455567777777777899999999999999999999988899999994431                           


Q ss_pred             ---------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC--
Q 044875           97 ---------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN--  135 (268)
Q Consensus        97 ---------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~--  135 (268)
                                                             .....++.+++.||.|||+.+   ++||||||+||+++.  
T Consensus        98 iv~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~  174 (360)
T 3llt_A           98 IVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPY  174 (360)
T ss_dssp             BCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTT
T ss_pred             eecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEcccc
Confidence                                                   345678999999999999988   999999999999975  


Q ss_pred             -----------------------CCceee-eecc------------------------CCCcCccccEeechHHHHHHHh
Q 044875          136 -----------------------DMTTHV-EYGM------------------------GNQFSTNGDVYSYGKLLLEIFT  167 (268)
Q Consensus       136 -----------------------~~~~~i-e~~~------------------------~~~~~~~~Dv~s~G~vl~el~t  167 (268)
                                             +...++ ||+.                        +..++.++||||+|+++||+++
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  254 (360)
T 3llt_A          175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT  254 (360)
T ss_dssp             CCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH
T ss_pred             ccccccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH
Confidence                                   444444 4443                        3457889999999999999999


Q ss_pred             CCCCCCcc
Q 044875          168 GKRSTSDM  175 (268)
Q Consensus       168 g~~p~~~~  175 (268)
                      |+.||...
T Consensus       255 g~~pf~~~  262 (360)
T 3llt_A          255 GSLLFRTH  262 (360)
T ss_dssp             SSCSCCCS
T ss_pred             CCCCCCCC
Confidence            99999753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=1.5e-28  Score=203.64  Aligned_cols=167  Identities=22%  Similarity=0.334  Sum_probs=124.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....+++.||+|.+..                                           
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            3667788899999999999999988999999994432                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                             .....++.+++.|+.|||+. +   ++||||||+||+++.+...++ ||+.      
T Consensus        86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  162 (290)
T 3fme_A           86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVD  162 (290)
T ss_dssp             ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred             ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence                                   33567899999999999997 8   999999999999999887777 3432      


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              ...++.++||||+|++++|+++|+.||.........+........+....      
T Consensus       163 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------  236 (290)
T 3fme_A          163 DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA------  236 (290)
T ss_dssp             -------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT------
T ss_pred             cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccc------
Confidence                                    23467789999999999999999999975322222222222211111000      


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQT  257 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~  257 (268)
                                            ...+..+.+++..||+.||++|||+.++++  +++.
T Consensus       237 ----------------------~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          237 ----------------------DKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             ----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             ----------------------ccCCHHHHHHHHHHhhcChhhCcCHHHHHhCccccc
Confidence                                  022445788999999999999999999986  5443

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=2.1e-28  Score=200.87  Aligned_cols=167  Identities=22%  Similarity=0.413  Sum_probs=126.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... ++..+|+|.+..                                            
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   88 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   88 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence            45677789999999999999997 577899994432                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.+++.|+.|||+.+   ++||||||+||+++.+...++ ||+.+            
T Consensus        89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  165 (269)
T 4hcu_A           89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  165 (269)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence                             345678999999999999988   999999999999988877766 44422            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..++.++||||+|++++|+++ |+.||......  ..............+              
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~~~~--------------  229 (269)
T 4hcu_A          166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRLYKP--------------  229 (269)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCCCCC--------------
T ss_pred             CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhcCccCCCC--------------
Confidence                            346788999999999999999 99998753221  111111111110000              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                    ......+.+++..||+.||++|||++++++.|+++.+.
T Consensus       230 --------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          230 --------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             --------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             --------------CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence                          02234578899999999999999999999999998763

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=1.2e-28  Score=204.08  Aligned_cols=172  Identities=22%  Similarity=0.388  Sum_probs=131.6

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|....++..+|+|.+..                                          
T Consensus        11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   90 (288)
T 3kfa_A           11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   90 (288)
T ss_dssp             CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence            44677788899999999999999988899999994332                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.+         
T Consensus        91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  167 (288)
T 3kfa_A           91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  167 (288)
T ss_dssp             CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE
T ss_pred             CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc
Confidence                                345678899999999999998   999999999999988877766 44422         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         ..++.++||||+|++++|+++ |..||......  .............            .
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~  233 (288)
T 3kfa_A          168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKDYRME------------R  233 (288)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCC------------C
T ss_pred             cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhccCCCC------------C
Confidence                               345778999999999999999 99998753221  1111111111100            0


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      .                ...+..+.+++..||+.||.+|||+.++++.|+.+.++..
T Consensus       234 ~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~  274 (288)
T 3kfa_A          234 P----------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESS  274 (288)
T ss_dssp             C----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             C----------------CCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence            0                1334568899999999999999999999999999887643

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=7.8e-28  Score=200.10  Aligned_cols=170  Identities=25%  Similarity=0.407  Sum_probs=124.6

Q ss_pred             CCcCCcccCCCcceEEEEEecCCC---eEEEEeecCc-------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQ---TVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~---~~vavK~l~~-------------------------------------------   96 (268)
                      |...+.||+|+||.||+|.+..++   ..+|+|.+..                                           
T Consensus        23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~  102 (298)
T 3pls_A           23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL  102 (298)
T ss_dssp             EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred             EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence            344578999999999999975443   3799994332                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+        
T Consensus       103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  179 (298)
T 3pls_A          103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDREY  179 (298)
T ss_dssp             CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred             ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence                                 345688899999999999988   999999999999999887777 45433        


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                             ..++.++||||||++++|+++|..|+...... ................        
T Consensus       180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~--------  250 (298)
T 3pls_A          180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-FDLTHFLAQGRRLPQP--------  250 (298)
T ss_dssp             GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-GGHHHHHHTTCCCCCC--------
T ss_pred             cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-HHHHHHhhcCCCCCCC--------
Confidence                                   24577899999999999999966554432111 1122222111111000        


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                          ...+..+.+++..||+.||.+|||+.++++.|+++.+.+..
T Consensus       251 --------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          251 --------------------EYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             --------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             --------------------ccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence                                02234588899999999999999999999999999887653

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.95  E-value=2.4e-28  Score=204.77  Aligned_cols=175  Identities=25%  Similarity=0.413  Sum_probs=128.5

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecCc-----------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP-----------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~-----------------------------------   96 (268)
                      ++....++|...+.||+|+||.||+|....   .+..||+|.+..                                   
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            333445667778889999999999998754   456899994321                                   


Q ss_pred             ---------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC
Q 044875           97 ---------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM  137 (268)
Q Consensus        97 ---------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~  137 (268)
                                                             .....++.+++.||.|||+.+   ++||||||+||+++.++
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTS
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCC
Confidence                                                   234678899999999999988   99999999999999988


Q ss_pred             ceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHh
Q 044875          138 TTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFV  186 (268)
Q Consensus       138 ~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~  186 (268)
                      ..++ +|+.+                             ..++.++||||||++++|+++ |..||......  ......
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~  262 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYL  262 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHH
Confidence            7777 44432                             335778999999999999999 88888753221  111111


Q ss_pred             hhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       187 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      .........                            ...+..+.+++..||+.||++|||+.++++.|+.+.+.+
T Consensus       263 ~~~~~~~~~----------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          263 LHGHRLKQP----------------------------EDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HTTCCCCCB----------------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCC----------------------------ccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            111110000                            133456889999999999999999999999999998754

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.95  E-value=1.8e-28  Score=215.82  Aligned_cols=170  Identities=24%  Similarity=0.397  Sum_probs=128.9

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ....++|...+.||+|+||.||+|.+. ++..||+|.+..                                        
T Consensus       180 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e  258 (452)
T 1fmk_A          180 EIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE  258 (452)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred             ccChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEeh
Confidence            334466777889999999999999997 457799995432                                        


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+        
T Consensus       259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence                                 345678999999999999988   999999999999998877777 44432        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++||||||+++||+++ |+.||......  .............            
T Consensus       336 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~------------  401 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYRMP------------  401 (452)
T ss_dssp             -------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCC------------
T ss_pred             ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC------------
Confidence                                346788999999999999999 99999754321  1111111111000            


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      .                +..++..+.+++..||+.||++|||++++++.|+.+..
T Consensus       402 ~----------------~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          402 C----------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             C----------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             C----------------CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            0                01345668899999999999999999999999987753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=3.5e-28  Score=204.97  Aligned_cols=162  Identities=18%  Similarity=0.274  Sum_probs=123.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   86 (323)
T 3tki_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (323)
T ss_dssp             TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence            578888999999999999999988999999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+           
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~  163 (323)
T 3tki_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (323)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence                              346789999999999999988   999999999999999887777 44432           


Q ss_pred             ------------------CC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ------------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        .. ++.++||||+|++++|+++|+.||............+..........            
T Consensus       164 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------  231 (323)
T 3tki_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW------------  231 (323)
T ss_dssp             BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTG------------
T ss_pred             cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCcc------------
Confidence                              12 25679999999999999999999975433322222222111110000            


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ......+.+++..||+.||++|||+.++++
T Consensus       232 ----------------~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          232 ----------------KKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             ----------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence                            022345678999999999999999999874

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=4.7e-28  Score=208.04  Aligned_cols=168  Identities=24%  Similarity=0.420  Sum_probs=123.2

Q ss_pred             CCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-------------------------------------------   96 (268)
                      |...+.||+|+||.||+|.+..+   ...+|+|.+..                                           
T Consensus        91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~  170 (373)
T 3c1x_A           91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  170 (373)
T ss_dssp             EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred             eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence            34457899999999999997422   34689994432                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+        
T Consensus       171 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~  247 (373)
T 3c1x_A          171 PYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEF  247 (373)
T ss_dssp             ECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred             ECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccccc
Confidence                                 235678899999999999988   999999999999999888877 44432        


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             ..++.++||||||+++||+++ |.+||......  ..............+       
T Consensus       248 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~~~p-------  318 (373)
T 3c1x_A          248 DSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQP-------  318 (373)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCCCCC-------
T ss_pred             ccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCCCCC-------
Confidence                                   346788999999999999999 67777653221  111111111110000       


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                           ..++..+.+++..||+.||++|||+.++++.|+.+...+.
T Consensus       319 ---------------------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~  358 (373)
T 3c1x_A          319 ---------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  358 (373)
T ss_dssp             ---------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred             ---------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence                                 0234568899999999999999999999999999987654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.94  E-value=3.5e-28  Score=201.95  Aligned_cols=189  Identities=15%  Similarity=0.195  Sum_probs=124.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.+..                                            
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            457777899999999999999988899999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+          
T Consensus        82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  158 (292)
T 3o0g_A           82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC
T ss_pred             cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCccccc
Confidence                               345678999999999999998   999999999999999887777 44322          


Q ss_pred             -----------------C-CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------N-QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~-~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       . .++.++||||+|++++|+++|..|+.........+..............+-......... 
T Consensus       159 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-  237 (292)
T 3o0g_A          159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYK-  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCC-
T ss_pred             cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccc-
Confidence                             2 268899999999999999998888653322222222222211111000000000000000 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+..................+.+++..|++.||++|||++++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            000000000000011133456788999999999999999999875

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.94  E-value=1.7e-28  Score=201.20  Aligned_cols=167  Identities=24%  Similarity=0.388  Sum_probs=126.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... ++..||+|.+..                                            
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (268)
T 3sxs_A            8 EEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS   86 (268)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred             hheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence            56777789999999999999887 677899994332                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+.+            
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  163 (268)
T 3sxs_A           87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV  163 (268)
T ss_dssp             TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC
T ss_pred             CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhhhccc
Confidence                             456788999999999999988   999999999999998887777 34322            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..++.++||||+|++++|+++ |+.||.......  .............+.             
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~-------------  228 (268)
T 3sxs_A          164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE--VVLKVSQGHRLYRPH-------------  228 (268)
T ss_dssp             SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH--HHHHHHTTCCCCCCT-------------
T ss_pred             CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH--HHHHHHcCCCCCCCC-------------
Confidence                            245779999999999999999 999997532221  111111111000000             


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                     ..+..+.+++..||+.||++|||+.++++.|+.+.++
T Consensus       229 ---------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          229 ---------------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             ---------------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             ---------------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence                           1234578899999999999999999999999988654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.94  E-value=5.2e-28  Score=199.90  Aligned_cols=168  Identities=22%  Similarity=0.367  Sum_probs=125.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|... ++..||+|.+..                                           
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  101 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM  101 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence            456777789999999999999987 677899994432                                           


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.+           
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (283)
T 3gen_A          102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS  178 (283)
T ss_dssp             TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred             CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence                              346788999999999999988   999999999999999887777 44322           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ..++.++||||+|++++|+++ |+.||......  ................            
T Consensus       179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~------------  244 (283)
T 3gen_A          179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYRPH------------  244 (283)
T ss_dssp             TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCCCCCT------------
T ss_pred             cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh--HHHHHHhcccCCCCCC------------
Confidence                             346789999999999999998 99999753321  1111111111000000            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                      .....+.+++..||+.||++|||+.++++.|+++.++
T Consensus       245 ----------------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          245 ----------------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             ----------------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----------------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence                            2234578899999999999999999999999998764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.94  E-value=3.7e-28  Score=199.44  Aligned_cols=167  Identities=25%  Similarity=0.409  Sum_probs=122.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|..  .+..+|+|.+..                                            
T Consensus         7 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (271)
T 3dtc_A            7 AELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV   84 (271)
T ss_dssp             TSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred             hheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence            5677788999999999999998  478899994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC--------CCceee-eeccC-
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN--------DMTTHV-EYGMG-  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~--------~~~~~i-e~~~~-  146 (268)
                                          .....++.+++.|+.|||+.+..+++||||||+||+++.        +...++ +|+.+ 
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~  164 (271)
T 3dtc_A           85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR  164 (271)
T ss_dssp             EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred             EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence                                346788999999999999987556889999999999986        344444 44432 


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++||||||++++|+++|+.||......... ...........         
T Consensus       165 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~---------  234 (271)
T 3dtc_A          165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA-YGVAMNKLALP---------  234 (271)
T ss_dssp             -----------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH-HHHHTSCCCCC---------
T ss_pred             ccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HhhhcCCCCCC---------
Confidence                                    34678899999999999999999999753221110 00000000000         


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                         ..                ..++..+.+++..||+.||++|||+.++++.|+.+
T Consensus       235 ---~~----------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          235 ---IP----------------STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             ---CC----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             ---CC----------------cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence               00                13345688999999999999999999999999754

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=8.6e-28  Score=198.13  Aligned_cols=166  Identities=25%  Similarity=0.394  Sum_probs=127.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|..  .+..+|+|.+..                                            
T Consensus        21 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   98 (278)
T 1byg_A           21 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   98 (278)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             hhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCC
Confidence            5677788999999999999998  488999994432                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.|+.|||+.+   ++|+||||+||+++.+...++ +|+..           
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  175 (278)
T 1byg_A           99 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  175 (278)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeeccccccccccccCCC
Confidence                              235678899999999999988   999999999999998887777 44432           


Q ss_pred             -------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                   ..++.++||||||++++|+++ |+.||......  .............            ..     
T Consensus       176 ~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~-----  236 (278)
T 1byg_A          176 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMD------------AP-----  236 (278)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTTTCCCC------------CC-----
T ss_pred             ccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcCCCCC------------Cc-----
Confidence                         346788999999999999998 99998753221  1111111111000            00     


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                 ...+..+.+++..||+.||++|||+.++++.|+.+...
T Consensus       237 -----------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          237 -----------DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             -----------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----------ccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence                       13345688899999999999999999999999999865

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=6.2e-28  Score=201.94  Aligned_cols=184  Identities=19%  Similarity=0.288  Sum_probs=125.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      +++|...+.||+|+||+||+|....+++.||+|.+.                                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~   87 (308)
T 3g33_A            8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR   87 (308)
T ss_dssp             --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence            578999999999999999999998889999999542                                            


Q ss_pred             -------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee
Q 044875           96 -------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY  143 (268)
Q Consensus        96 -------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~  143 (268)
                                                     +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Df  164 (308)
T 3g33_A           88 TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADF  164 (308)
T ss_dssp             SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECSC
T ss_pred             CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEeeC
Confidence                                           1335678999999999999998   999999999999998887777 44


Q ss_pred             ccC--------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---ch
Q 044875          144 GMG--------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QI  194 (268)
Q Consensus       144 ~~~--------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~  194 (268)
                      +.+                          ..++.++||||+|++++|+++|+.||....... .+..........   ..
T Consensus       165 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~  243 (308)
T 3g33_A          165 GLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDW  243 (308)
T ss_dssp             SCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCTTTS
T ss_pred             ccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhc
Confidence            432                          446889999999999999999999997533221 111111111100   00


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....... ............     .....+....+.+++..||+.||++|||+.++++
T Consensus       244 ~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          244 PRDVSLP-RGAFPPRGPRPV-----QSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             CSSCSSC-GGGSCCCCCCCH-----HHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cchhhcc-ccccCCCCCCcH-----HHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            0000000 000000000000     0001133456788999999999999999999885

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.2e-27  Score=217.64  Aligned_cols=162  Identities=23%  Similarity=0.399  Sum_probs=125.3

Q ss_pred             cccCCCcceEEEEEec--CCCeEEEEeecCc-------------------------------------------------
Q 044875           68 IIGAGSFGSVCKGILD--PDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        68 ~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .||+|+||.||+|.+.  .++..||||.+..                                                 
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L  422 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL  422 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence            6899999999999874  3567899995432                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------------  146 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------------  146 (268)
                                   .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+                
T Consensus       423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  499 (613)
T 2ozo_A          423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG  499 (613)
T ss_dssp             HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred             HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence                         345778999999999999988   999999999999998887777 45432                


Q ss_pred             --------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          147 --------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       147 --------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ..++.++||||||+++||+++ |+.||......  .+......+....            .     
T Consensus       500 ~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~~------------~-----  560 (613)
T 2ozo_A          500 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRME------------C-----  560 (613)
T ss_dssp             --CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHTTCCCC------------C-----
T ss_pred             CCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCCCC------------C-----
Confidence                          346788999999999999998 99999864322  1222222111100            0     


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                 +..++..+.+++..||+.||++||++.+|++.|+.+....
T Consensus       561 -----------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          561 -----------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             -----------CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -----------CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence                       0134567899999999999999999999999999987654

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=8e-28  Score=201.93  Aligned_cols=169  Identities=18%  Similarity=0.229  Sum_probs=126.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||++....+++.||+|.+.                                            
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            356888899999999999999998889999999331                                            


Q ss_pred             -------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           96 -------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        96 -------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                               +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ +|+..   
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence                                     1345678999999999999988   999999999999998877766 44421   


Q ss_pred             ------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          147 ------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       147 ------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                                                          ..++.++||||||+++||+++|+.||..................
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  264 (317)
T 2buj_A          185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL  264 (317)
T ss_dssp             CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC-
T ss_pred             ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC
Confidence                                                11577999999999999999999999753332222222211110


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      ....            .                ...+..+.+++..||+.||.+|||+.++++.|+.+.
T Consensus       265 ~~~~------------~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~  305 (317)
T 2buj_A          265 SIPQ------------S----------------PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ  305 (317)
T ss_dssp             -CCC------------C----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred             CCCc------------c----------------ccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence            0000            0                022446888999999999999999999999998875

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.94  E-value=4.2e-28  Score=206.09  Aligned_cols=160  Identities=21%  Similarity=0.379  Sum_probs=116.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||.||++... +++.||+|.+..                                            
T Consensus         9 ~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             CEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            55778889999999999999986 688999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+ ..++ ||+.+         
T Consensus        88 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~~~-~~kl~DFG~a~~~~~~~~~  163 (343)
T 3dbq_A           88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTS  163 (343)
T ss_dssp             ECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETT-EEEECCCSSSCCC------
T ss_pred             EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEECC-cEEEeecccccccCccccc
Confidence                                346788999999999999988   9999999999999753 3444 45432         


Q ss_pred             -------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchh
Q 044875          147 -------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS  195 (268)
Q Consensus       147 -------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  195 (268)
                                                     ..++.++||||||+++||+++|+.||.........+..           
T Consensus       164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~-----------  232 (343)
T 3dbq_A          164 VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA-----------  232 (343)
T ss_dssp             ------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHH-----------
T ss_pred             ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHH-----------
Confidence                                           33566899999999999999999999753221111111           


Q ss_pred             hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          196 EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       196 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       ..++......+.                .....+.+++..||+.||.+|||+.++++
T Consensus       233 -~~~~~~~~~~~~----------------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          233 -IIDPNHEIEFPD----------------IPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             -HHCTTSCCCCCC----------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -HhcCCcccCCcc----------------cCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence             111111111111                12345788999999999999999999984

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.94  E-value=5.6e-28  Score=208.25  Aligned_cols=133  Identities=24%  Similarity=0.389  Sum_probs=100.3

Q ss_pred             chhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------C
Q 044875           98 TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------N  147 (268)
Q Consensus        98 ~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~  147 (268)
                      ....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+                             .
T Consensus       192 ~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  268 (382)
T 3tt0_A          192 DLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR  268 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCC
Confidence            35678999999999999988   999999999999998888877 55433                             2


Q ss_pred             CcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHH
Q 044875          148 QFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQES  226 (268)
Q Consensus       148 ~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (268)
                      .++.++||||||++++|+++ |..||......  .+............            .                ..+
T Consensus       269 ~~~~~~DiwslG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~~~------------~----------------~~~  318 (382)
T 3tt0_A          269 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDK------------P----------------SNC  318 (382)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCCCCC------------C----------------SSC
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC------------C----------------ccC
Confidence            35678999999999999999 99999753221  11111111111000            0                133


Q ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          227 LITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       227 ~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      +..+.+++..||+.||++|||+.+|++.|+.+.....
T Consensus       319 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  355 (382)
T 3tt0_A          319 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTS  355 (382)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence            4568889999999999999999999999999987643

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.94  E-value=2.1e-28  Score=208.17  Aligned_cols=176  Identities=20%  Similarity=0.263  Sum_probs=120.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecC------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFK------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....   ++..+|+|.+.                                          
T Consensus        37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~  116 (345)
T 2v62_A           37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS  116 (345)
T ss_dssp             CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred             ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence            567888899999999999999976   67889998321                                          


Q ss_pred             ---------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC--cee
Q 044875           96 ---------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM--TTH  140 (268)
Q Consensus        96 ---------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~--~~~  140 (268)
                                                       +.....++.+++.||.|||+.+   ++||||||+||+++.+.  ..+
T Consensus       117 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~k  193 (345)
T 2v62_A          117 GLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPDQVY  193 (345)
T ss_dssp             EEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTTSEE
T ss_pred             cccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCCcEE
Confidence                                             1345789999999999999988   99999999999998776  555


Q ss_pred             e-eeccC----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhH
Q 044875          141 V-EYGMG----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF  185 (268)
Q Consensus       141 i-e~~~~----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~  185 (268)
                      + ||+.+                                  ..++.++||||||+++||+++|+.||.............
T Consensus       194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~  273 (345)
T 2v62_A          194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA  273 (345)
T ss_dssp             ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred             EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence            5 44433                                  236789999999999999999999996432221111111


Q ss_pred             hhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          186 VKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       186 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .. .....+...+......                   ...+.++.+++..||+.||++|||+.+|++.|+.+.
T Consensus       274 ~~-~~~~~~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          274 KT-NLLDELPQSVLKWAPS-------------------GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HH-HHHHTTTHHHHHHSCT-------------------TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HH-hhcccccHHHHhhccc-------------------cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            11 1111111111000000                   023456889999999999999999999999998653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=5.6e-28  Score=210.30  Aligned_cols=164  Identities=14%  Similarity=0.151  Sum_probs=123.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|+...+++.||||.+..                                            
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            346667789999999999999988899999995541                                            


Q ss_pred             -----------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeee
Q 044875           97 -----------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVH  123 (268)
Q Consensus        97 -----------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h  123 (268)
                                                                           ..+..++.+++.||.|||+.+   ++|
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiH  234 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVH  234 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence                                                                 023456689999999999988   999


Q ss_pred             cCCCCCccccCCCCceee-eeccC---------------------------------CCcCccccEeechHHHHHHHhCC
Q 044875          124 CDSKPSNILLDNDMTTHV-EYGMG---------------------------------NQFSTNGDVYSYGKLLLEIFTGK  169 (268)
Q Consensus       124 ~dlk~~nill~~~~~~~i-e~~~~---------------------------------~~~~~~~Dv~s~G~vl~el~tg~  169 (268)
                      |||||+|||++.++..++ |||..                                 ..++.++|||||||++||+++|+
T Consensus       235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~  314 (413)
T 3dzo_A          235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCAD  314 (413)
T ss_dssp             SCCCGGGEEECTTCCEEECCGGGCEETTEEECCCCCTTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSS
T ss_pred             CCcccceEEEecCCeEEEEeccceeecCCccccCCCCceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCC
Confidence            999999999999988877 55542                                 12556999999999999999999


Q ss_pred             CCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH
Q 044875          170 RSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS  249 (268)
Q Consensus       170 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~  249 (268)
                      .||........                 .+..+.. ..                 ..+..+.+++..||+.||++||++.
T Consensus       315 ~Pf~~~~~~~~-----------------~~~~~~~-~~-----------------~~~~~~~~li~~~l~~dP~~Rpt~~  359 (413)
T 3dzo_A          315 LPNTDDAALGG-----------------SEWIFRS-CK-----------------NIPQPVRALLEGFLRYPKEDRLLPL  359 (413)
T ss_dssp             CCCCTTGGGSC-----------------SGGGGSS-CC-----------------CCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             CCCCCcchhhh-----------------HHHHHhh-cc-----------------cCCHHHHHHHHHHccCChhhCcCHH
Confidence            99975332211                 0000000 00                 1234588899999999999999999


Q ss_pred             HHHH--HHHHhHHHH
Q 044875          250 DVVN--NLQTVKSTL  262 (268)
Q Consensus       250 ~v~~--~L~~l~~~~  262 (268)
                      ++++  .++.+.+.+
T Consensus       360 ~~l~~~~~~~~~~~~  374 (413)
T 3dzo_A          360 QAMETPEYEQLRTEL  374 (413)
T ss_dssp             HHTTSHHHHHHHHHH
T ss_pred             HHHhCHHHHHHHHHH
Confidence            8874  355555443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=1e-27  Score=207.06  Aligned_cols=113  Identities=27%  Similarity=0.492  Sum_probs=89.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus         8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            4678888999999999999999988999999994421                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+        
T Consensus        88 lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           88 LVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             EEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred             EEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence                                 234668889999999999988   999999999999999887777 55532        


Q ss_pred             -----------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 -----------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 -----------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                                               ..++.++||||+||+++|+++|+.||.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  234 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS  234 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence                                                     34678899999999999999999999864

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.94  E-value=3.6e-28  Score=206.13  Aligned_cols=175  Identities=26%  Similarity=0.402  Sum_probs=129.4

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc----------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~----------------------------------   96 (268)
                      +....++|...+.||+|+||.||+|...     .+++.||+|.+..                                  
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            3344578888899999999999999986     3458999994432                                  


Q ss_pred             ----------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeec
Q 044875           97 ----------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHC  124 (268)
Q Consensus        97 ----------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~  124 (268)
                                                                          .....++.+++.||.|||+.+   ++||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~  198 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHR  198 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecC
Confidence                                                                113458899999999999988   9999


Q ss_pred             CCCCCccccCCCCceee-eecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCC
Q 044875          125 DSKPSNILLDNDMTTHV-EYGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTS  173 (268)
Q Consensus       125 dlk~~nill~~~~~~~i-e~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~  173 (268)
                      ||||+||+++.++..++ ||+.                             ...++.++||||||+++||+++ |..||.
T Consensus       199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  278 (343)
T 1luf_A          199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYY  278 (343)
T ss_dssp             CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCC
Confidence            99999999998877776 3432                             1346789999999999999999 999997


Q ss_pred             cccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          174 DMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ......  +............            +                ..++..+.+++..||+.||++|||+.++++
T Consensus       279 ~~~~~~--~~~~~~~~~~~~~------------~----------------~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          279 GMAHEE--VIYYVRDGNILAC------------P----------------ENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             TSCHHH--HHHHHHTTCCCCC------------C----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCChHH--HHHHHhCCCcCCC------------C----------------CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            532211  1111111110000            0                133456889999999999999999999999


Q ss_pred             HHHHhHHHHh
Q 044875          254 NLQTVKSTLL  263 (268)
Q Consensus       254 ~L~~l~~~~~  263 (268)
                      .|+++.+.+.
T Consensus       329 ~L~~~~~~~~  338 (343)
T 1luf_A          329 ILQRMCERAE  338 (343)
T ss_dssp             HHHHTTC---
T ss_pred             HHHHHHhhhh
Confidence            9999876554

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.94  E-value=8.4e-28  Score=200.00  Aligned_cols=171  Identities=18%  Similarity=0.338  Sum_probs=127.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+.                                             
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   90 (294)
T 4eqm_A           11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM   90 (294)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence            56778889999999999999998889999999431                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+         
T Consensus        91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  167 (294)
T 4eqm_A           91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT  167 (294)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred             eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence                               1346788999999999999988   999999999999998887777 45432         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                         ..++.++||||+|+++||+++|+.||.......... .......+ .......        
T Consensus       168 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~-~~~~~~~--------  237 (294)
T 4eqm_A          168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI-KHIQDSVP-NVTTDVR--------  237 (294)
T ss_dssp             -------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH-HHHSSCCC-CHHHHSC--------
T ss_pred             ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhhccCC-Ccchhcc--------
Confidence                               235678999999999999999999997532211100 00010000 1111000        


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-ChHHHHHHHHHhHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-DTSDVVNNLQTVKS  260 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~~v~~~L~~l~~  260 (268)
                                      ...+..+.+++..||+.||++|| +++++...|+.+..
T Consensus       238 ----------------~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          238 ----------------KDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             ----------------TTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             ----------------cCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence                            13345688899999999999999 78888888877643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.94  E-value=1.1e-27  Score=209.38  Aligned_cols=112  Identities=29%  Similarity=0.461  Sum_probs=95.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  176 (429)
T 3kvw_A           97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICM  176 (429)
T ss_dssp             TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEE
T ss_pred             CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEE
Confidence            467788899999999999999988899999994422                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc--eee-eeccC----
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--THV-EYGMG----  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~--~~i-e~~~~----  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+|||++.+..  .++ |||.+    
T Consensus       177 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          177 TFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             EECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             EEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence                                   335678999999999999998   999999999999998876  455 55543    


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                          ..++.++|||||||++||+++|+.||...
T Consensus       254 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~  302 (429)
T 3kvw_A          254 QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE  302 (429)
T ss_dssp             CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence                                35788999999999999999999999754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.94  E-value=1.4e-27  Score=200.72  Aligned_cols=190  Identities=14%  Similarity=0.173  Sum_probs=128.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (319)
T 4euu_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (319)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence            45777789999999999999998889999999432                                             


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc----CCCCceee-eecc---
Q 044875           96 ----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL----DNDMTTHV-EYGM---  145 (268)
Q Consensus        96 ----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill----~~~~~~~i-e~~~---  145 (268)
                                            +.....++.+++.||.|||+.+   ++||||||+||++    +.+...++ ||+.   
T Consensus        89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence                                  1345678999999999999988   9999999999998    55555555 3332   


Q ss_pred             -------------------------------CCCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCcc
Q 044875          146 -------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPD  192 (268)
Q Consensus       146 -------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~  192 (268)
                                                     ...++.++||||||+++||+++|+.||........  ..........+.
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~  245 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCT
T ss_pred             cCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCc
Confidence                                           24567899999999999999999999974332211  111111111111


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                      .....+............    +-.............+..++..||+.||++|||++++++...+
T Consensus       246 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          246 GAISGVQKAENGPIDWSG----DMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             TCCEEEECSTTCCEEEES----SCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             ccchhhhcccCCccccCc----cCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence            100000000000000000    0000111224667778999999999999999999999987664

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=6.9e-28  Score=207.32  Aligned_cols=125  Identities=14%  Similarity=0.188  Sum_probs=94.1

Q ss_pred             hHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------C---------
Q 044875          101 SIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------N---------  147 (268)
Q Consensus       101 ~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------~---------  147 (268)
                      .++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+                       .         
T Consensus       210 ~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g~~y~aPE~~~~~~~~~~~~~~  286 (377)
T 3byv_A          210 QLTLQVIRLLASLHHYG---LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDR  286 (377)
T ss_dssp             HHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCGGGCEETTCEEECCCCTTCCCHHHHHHHTSTHHHHCC
T ss_pred             HHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEechhheecCCcccCCCCcCccChhhhcccccccccccc
Confidence            58899999999999998   999999999999999888887 55543                       1         


Q ss_pred             --CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          148 --QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       148 --~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                        .++.++||||||+++||+++|+.||.........  .           ....     ...                 .
T Consensus       287 ~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~--~-----------~~~~-----~~~-----------------~  331 (377)
T 3byv_A          287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGS--E-----------WIFR-----SCK-----------------N  331 (377)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHSSCCC------CCS--G-----------GGGS-----SCC-----------------C
T ss_pred             cccCChhhhHHHHHHHHHHHHHCCCCCcccccccch--h-----------hhhh-----hcc-----------------C
Confidence              5788999999999999999999999753222110  0           0000     000                 2


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhHHHHh
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVKSTLL  263 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~~~~~  263 (268)
                      .+..+.+++..||+.||++|||+.++++  .++++.+...
T Consensus       332 ~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~~~~~  371 (377)
T 3byv_A          332 IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELS  371 (377)
T ss_dssp             CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHHHHHH
Confidence            2345788999999999999999999995  7777776654

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.94  E-value=1e-27  Score=218.73  Aligned_cols=163  Identities=21%  Similarity=0.359  Sum_probs=125.2

Q ss_pred             CcccCCCcceEEEEEe--cCCCeEEEEeecCc------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGIL--DPDQTVVSVRDFKP------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~--~~~~~~vavK~l~~------------------------------------------------   96 (268)
                      +.||+|+||.||+|.+  ...++.||||.+..                                                
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g  454 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG  454 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence            3699999999999965  34568899995432                                                


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------------  146 (268)
                                    .....++.+++.||.|||+.+   ++||||||+|||++.+...++ ||+.+               
T Consensus       455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence                          345789999999999999988   999999999999998888777 44421               


Q ss_pred             ---------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                     ..++.++||||||+++||+++ |+.||......  .+............                
T Consensus       532 ~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~~~~~~~----------------  593 (635)
T 4fl3_A          532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERMGC----------------  593 (635)
T ss_dssp             ---CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCCC----------------
T ss_pred             CCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCC----------------
Confidence                           257789999999999999998 99999764322  11222221111100                


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                  +..++..+.+++..||+.||++||++.+|++.|+.+...+
T Consensus       594 ------------p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          594 ------------PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             ------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             ------------CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence                        0134566889999999999999999999999999987654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.94  E-value=5.9e-28  Score=202.32  Aligned_cols=130  Identities=24%  Similarity=0.439  Sum_probs=98.4

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      ...++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+                             ..
T Consensus       152 ~~~i~~qi~~~l~~lH~~~---ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~  228 (314)
T 2ivs_A          152 LISFAWQISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHI  228 (314)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHCC---CcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCC
Confidence            4578899999999999988   999999999999998887777 44432                             22


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++||||+|++++|+++ |..||......  .+.............                            ...+
T Consensus       229 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~----------------------------~~~~  278 (314)
T 2ivs_A          229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE--RLFNLLKTGHRMERP----------------------------DNCS  278 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTTCCCCCC----------------------------TTCC
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHhhcCCcCCCC----------------------------ccCC
Confidence            5778999999999999999 99999753322  111211111111000                            1334


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ..+.+++..||+.||++|||+.++++.|+++.++
T Consensus       279 ~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          279 EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            5688999999999999999999999999998764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.94  E-value=5.9e-28  Score=205.57  Aligned_cols=161  Identities=24%  Similarity=0.334  Sum_probs=122.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  133 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM  133 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence            447777889999999999999988999999995421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.          
T Consensus       134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~  210 (348)
T 1u5q_A          134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF  210 (348)
T ss_dssp             ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCC
T ss_pred             ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcc
Confidence                                345678999999999999988   999999999999999888777 4443          


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ...++.++||||||++++|+++|+.||....... .+........+.         ...     
T Consensus       211 ~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~---------~~~-----  275 (348)
T 1u5q_A          211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA---------LQS-----  275 (348)
T ss_dssp             CSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC---------CCC-----
T ss_pred             cCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCC---------CCC-----
Confidence                            2457789999999999999999999997532211 111111111100         000     


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ...+..+.+++..||+.||++|||++++++
T Consensus       276 --------------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          276 --------------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             --------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------------CCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                          022345778999999999999999999874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=6.6e-28  Score=203.68  Aligned_cols=160  Identities=22%  Similarity=0.295  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            3678888999999999999999988999999994321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+         
T Consensus        94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  170 (328)
T 3fe3_A           94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL  170 (328)
T ss_dssp             CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG
T ss_pred             ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc
Confidence                                345678999999999999988   999999999999999888877 55533         


Q ss_pred             -----------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ..+ +.++||||+|++++|+++|+.||......  .+......... ..+.            
T Consensus       171 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~-~~p~------------  235 (328)
T 3fe3_A          171 DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLK--ELRERVLRGKY-RIPF------------  235 (328)
T ss_dssp             GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT------------
T ss_pred             ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCCC------------
Confidence                             122 46899999999999999999999753211  11111111100 0000            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ..+..+.+++..||+.||.+|||++++++
T Consensus       236 ----------------~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          236 ----------------YMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             ----------------TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             ----------------CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                            12345778999999999999999999974

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.94  E-value=7.1e-28  Score=201.98  Aligned_cols=182  Identities=20%  Similarity=0.325  Sum_probs=134.5

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc-----------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP-----------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~-----------------------------   96 (268)
                      +...++....++|...+.||+|+||.||+|..     ..+++.||+|.+..                             
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            44555666678899999999999999999985     34678999993321                             


Q ss_pred             ---------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecC
Q 044875           97 ---------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCD  125 (268)
Q Consensus        97 ---------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~d  125 (268)
                                                                         .....++.+++.||.|||+.+   ++|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---ccccc
Confidence                                                               234568889999999999988   99999


Q ss_pred             CCCCccccCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCc
Q 044875          126 SKPSNILLDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSD  174 (268)
Q Consensus       126 lk~~nill~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~  174 (268)
                      |||+||+++.++..++ +|+..                             ..++.++||||||++++|+++ |..||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            9999999998777766 44422                             346778999999999999998 9999975


Q ss_pred             ccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          175 MFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                      ..... .+..............                            .....+.+++..||+.||.+|||+.++++.
T Consensus       254 ~~~~~-~~~~~~~~~~~~~~~~----------------------------~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          254 VKIDE-EFCRRLKEGTRMRAPD----------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             CCCSH-HHHHHHHHTCCCCCCT----------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cchhH-HHHHHhccCccCCCCC----------------------------CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            32221 1111111111100000                            223458889999999999999999999999


Q ss_pred             HHHhHHHHhh
Q 044875          255 LQTVKSTLLR  264 (268)
Q Consensus       255 L~~l~~~~~~  264 (268)
                      |+.+.+....
T Consensus       305 L~~~~~~~~~  314 (316)
T 2xir_A          305 LGNLLQANAQ  314 (316)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHhhhcc
Confidence            9999876543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.94  E-value=6.6e-28  Score=202.21  Aligned_cols=184  Identities=20%  Similarity=0.310  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... +++.+|+|.+..                                            
T Consensus        21 ~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   99 (311)
T 3niz_A           21 EKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE   99 (311)
T ss_dssp             CEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred             hhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence            66778889999999999999996 689999994431                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+.+          
T Consensus       100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~  176 (311)
T 3niz_A          100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY  176 (311)
T ss_dssp             CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred             CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCcccc
Confidence                               345678999999999999988   999999999999998887777 34321          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC---ccchhhhcchhh-hc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV---PDQISEVLDPLF-VA  204 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~-~~  204 (268)
                                        ..++.++||||+|++++|+++|+.||....... .+........   +.......+... ..
T Consensus       177 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~  255 (311)
T 3niz_A          177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPLWKQ  255 (311)
T ss_dssp             -CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHHHHS
T ss_pred             cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccchhhh
Confidence                              346788999999999999999999998643322 1222222111   111111110000 00


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...........    .........++.+++..||+.||++|||++++++
T Consensus       256 ~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          256 RTFQVFEKKPW----SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             CCCCCCCCCCH----HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cccccccCCcH----HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            00000000000    0000123456788999999999999999999985

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=2.4e-27  Score=200.32  Aligned_cols=169  Identities=18%  Similarity=0.245  Sum_probs=125.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      ..+|...+.||+|+||.||+|....+++.||+|.+.                                            
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~  106 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ  106 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence            356778899999999999999998889999999331                                            


Q ss_pred             ----------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC
Q 044875           96 ----------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG  146 (268)
Q Consensus        96 ----------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~  146 (268)
                                                  +.....++.+++.||.|||+.+ .+++||||||+||+++.++..++ ||+..
T Consensus       107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~  185 (337)
T 3ll6_A          107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGSA  185 (337)
T ss_dssp             EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTTC
T ss_pred             ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCccc
Confidence                                        1345778999999999999865 45999999999999998877776 44432


Q ss_pred             ------------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhh
Q 044875          147 ------------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN  184 (268)
Q Consensus       147 ------------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~  184 (268)
                                                                ..++.++||||||+++||+++|+.||.......     
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----  260 (337)
T 3ll6_A          186 TTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-----  260 (337)
T ss_dssp             BCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             eeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----
Confidence                                                      235678999999999999999999997532211     


Q ss_pred             HhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          185 FVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       185 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ..........            ..                .....+.+++..||+.||++|||+.++++.|+.+....
T Consensus       261 ~~~~~~~~~~------------~~----------------~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          261 IVNGKYSIPP------------HD----------------TQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             -----CCCCT------------TC----------------CSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             hhcCcccCCc------------cc----------------ccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            0000000000            00                11223678899999999999999999999999988653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.4e-27  Score=202.00  Aligned_cols=168  Identities=23%  Similarity=0.432  Sum_probs=124.5

Q ss_pred             CCcCCcccCCCcceEEEEEecCC----CeEEEEeecCc------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPD----QTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~----~~~vavK~l~~------------------------------------------   96 (268)
                      |...+.||+|+||.||+|....+    +..||+|.+..                                          
T Consensus        46 ~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  125 (333)
T 1mqb_A           46 VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT  125 (333)
T ss_dssp             EEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             hhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEE
Confidence            34467899999999999988543    34699994432                                          


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.         
T Consensus       126 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  202 (333)
T 1mqb_A          126 EYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE  202 (333)
T ss_dssp             ECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred             eCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence                                 346778999999999999988   999999999999998887777 3332         


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           ...++.++||||||+++||+++ |+.||......  .+...........          
T Consensus       203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~~~----------  270 (333)
T 1mqb_A          203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH--EVMKAINDGFRLP----------  270 (333)
T ss_dssp             --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCCC----------
T ss_pred             cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHHCCCcCC----------
Confidence                                 2346778999999999999999 99999753221  1111111110000          


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                        .                +..++..+.+++..||+.||++||++.++++.|+.+.+...
T Consensus       271 --~----------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  312 (333)
T 1mqb_A          271 --T----------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD  312 (333)
T ss_dssp             --C----------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred             --C----------------cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence              0                01234568889999999999999999999999999886543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=3.9e-28  Score=201.59  Aligned_cols=170  Identities=21%  Similarity=0.347  Sum_probs=127.1

Q ss_pred             CCCCcCC-cccCCCcceEEEEEe--cCCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSAN-IIGAGSFGSVCKGIL--DPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~-~lG~G~fg~Vy~g~~--~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|.... .||+|+||.||+|.+  ...+..+|+|.+..                                         
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv   95 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV   95 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEE
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEE
Confidence            4555556 899999999999954  45678999994432                                         


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+..        
T Consensus        96 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (291)
T 1xbb_A           96 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN  172 (291)
T ss_dssp             EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred             EEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence                                 345789999999999999988   999999999999998877766 44432        


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                            ..++.++||||||+++||+++ |+.||......  .+............         
T Consensus       173 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~---------  241 (291)
T 1xbb_A          173 YYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERMGC---------  241 (291)
T ss_dssp             EEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCCC---------
T ss_pred             cccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCCC---------
Confidence                                  234668999999999999999 99999753221  11111111111000         


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                         +                ...+..+.+++..||+.||++|||+.++++.|+.+.....
T Consensus       242 ---~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  282 (291)
T 1xbb_A          242 ---P----------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV  282 (291)
T ss_dssp             ---C----------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred             ---C----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence               0                1334568899999999999999999999999999886643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.94  E-value=1.8e-27  Score=200.00  Aligned_cols=190  Identities=18%  Similarity=0.327  Sum_probs=111.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            3678888999999999999999988899999994321                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+     
T Consensus        84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  160 (317)
T 2pmi_A           84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGI  160 (317)
T ss_dssp             CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred             ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence                                    224567789999999999988   999999999999998887777 33321     


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-c-hhhhcc-
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-Q-ISEVLD-  199 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~d-  199 (268)
                                             ..++.++||||+|+++||+++|+.||....... .+....... .+. . ...... 
T Consensus       161 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~  239 (317)
T 2pmi_A          161 PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPSVTKL  239 (317)
T ss_dssp             CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGGGGGC
T ss_pred             CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhhhhhh
Confidence                                   246889999999999999999999997543221 111111111 100 0 000000 


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +.............................+.+++..||+.||++|||+.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            000000000000000001111111123456889999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.94  E-value=7.1e-28  Score=205.36  Aligned_cols=180  Identities=18%  Similarity=0.171  Sum_probs=128.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC--------CCeEEEEeecC-------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP--------DQTVVSVRDFK-------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~--------~~~~vavK~l~-------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....        +++.||+|.+.                                     
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~  121 (352)
T 2jii_A           42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT  121 (352)
T ss_dssp             CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred             CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence            578888999999999999999976        47899999331                                     


Q ss_pred             ------------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC--
Q 044875           96 ------------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM--  137 (268)
Q Consensus        96 ------------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~--  137 (268)
                                                          +.....++.+++.||.|||+.+   ++||||||+||+++.+.  
T Consensus       122 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl~~~~~~~  198 (352)
T 2jii_A          122 CMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIFVDPEDQS  198 (352)
T ss_dssp             CCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEEEETTEEE
T ss_pred             hhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEEcCCCCc
Confidence                                                1345678999999999999988   99999999999999886  


Q ss_pred             ceee-eeccC----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccch
Q 044875          138 TTHV-EYGMG----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL  182 (268)
Q Consensus       138 ~~~i-e~~~~----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~  182 (268)
                      ..++ +|+.+                                  ..++.++||||||+++||+++|+.||.........+
T Consensus       199 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~  278 (352)
T 2jii_A          199 QVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDI  278 (352)
T ss_dssp             EEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHH
T ss_pred             eEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHH
Confidence            5555 44432                                  246778999999999999999999998643222222


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ....... ........+.....                   ...+..+.+++..||+.||++|||+.++++.|+++.+..
T Consensus       279 ~~~~~~~-~~~~~~~~~~~~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          279 MKQKQKF-VDKPGPFVGPCGHW-------------------IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             HHHHHHH-HHSCCCEECTTSCE-------------------ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHhc-cCChhhhhhhcccc-------------------CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            1111110 00011111100000                   012456888999999999999999999999999998775


Q ss_pred             h
Q 044875          263 L  263 (268)
Q Consensus       263 ~  263 (268)
                      .
T Consensus       339 ~  339 (352)
T 2jii_A          339 R  339 (352)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.94  E-value=1e-27  Score=198.03  Aligned_cols=170  Identities=21%  Similarity=0.328  Sum_probs=126.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecCc----------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~----------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....   .+..||+|.+..                                        
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v   90 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII   90 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence            3667778899999999999998743   345699994432                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..       
T Consensus        91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred             EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence                                  345678899999999999988   999999999999998877766 34321       


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ..++.++||||||++++|+++ |+.||......  ...............         
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~~~~~~~---------  236 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKGDRLPKP---------  236 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHTCCCCCC---------
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcCCCCCCC---------
Confidence                                 346778999999999999998 99999743222  111111111110000         


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                         ...+..+.+++..||+.||++|||+.++++.|+.+.+..
T Consensus       237 -------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          237 -------------------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             -------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence                               022345888999999999999999999999999987653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.94  E-value=5.3e-28  Score=216.93  Aligned_cols=169  Identities=24%  Similarity=0.396  Sum_probs=128.2

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ....++|...+.||+|+||.||+|.+. ++..||||.+..                                        
T Consensus       263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e  341 (535)
T 2h8h_A          263 EIPRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTE  341 (535)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEC
T ss_pred             ecchhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeee
Confidence            334456777789999999999999997 457799994432                                        


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+|||++.+...++ ||+..        
T Consensus       342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence                                 345678999999999999988   999999999999998877777 45433        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++||||||+++||+++ |+.||......  .+...+.......            
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~------------  484 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVERGYRMP------------  484 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHTTCCCC------------
T ss_pred             ecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCC------------
Confidence                                346778999999999999999 99999754321  1111111111000            


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      .                +..++..+.+++..||+.||++|||+.+|++.|+.+.
T Consensus       485 ~----------------~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          485 C----------------PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             C----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             C----------------CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            0                0134556889999999999999999999999998764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.94  E-value=1.1e-27  Score=202.09  Aligned_cols=190  Identities=17%  Similarity=0.252  Sum_probs=126.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~  115 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  115 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECC
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEecc
Confidence            567788899999999999999988999999995432                                            


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC--------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG--------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~--------------  146 (268)
                                    .....++.+++.||.|||+.+   ++||||||+||+++.+. ..++ ||+.+              
T Consensus       116 ~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  192 (330)
T 3nsz_A          116 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  192 (330)
T ss_dssp             CCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCS
T ss_pred             CchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccc
Confidence                          345678999999999999988   99999999999998665 5555 44432              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC-------
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG-------  206 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-------  206 (268)
                                   ..++.++||||+|++++|+++|+.||.........+.............+.++.......       
T Consensus       193 ~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (330)
T 3nsz_A          193 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  272 (330)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHH
T ss_pred             cccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhh
Confidence                         346789999999999999999999996433322222222222221111111110000000       


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ........+..............+.+++..||+.||++|||++++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          273 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00000000000111111124567889999999999999999999985

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.94  E-value=1.3e-27  Score=204.09  Aligned_cols=196  Identities=19%  Similarity=0.290  Sum_probs=120.5

Q ss_pred             HHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------
Q 044875           54 ESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------   96 (268)
Q Consensus        54 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------   96 (268)
                      .......++|...+.||+|+||.||+|....+++.||+|.+..                                     
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence            4556667899999999999999999999988899999993311                                     


Q ss_pred             ---------------------------------cchhhHHHHHHHHHHHHh--hcCCCCeeecCCCCCccccCC-CCcee
Q 044875           97 ---------------------------------CTRLSIAIDVASALEYLH--HHSEKPIVHCDSKPSNILLDN-DMTTH  140 (268)
Q Consensus        97 ---------------------------------~~~~~i~~~v~~~l~yLh--~~~~~~i~h~dlk~~nill~~-~~~~~  140 (268)
                                                       .....++.+++.|+.|||  +.+   ++||||||+||+++. ++..+
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~k  172 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLK  172 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEE
Confidence                                             123567889999999999  777   999999999999986 77776


Q ss_pred             e-eeccC---------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc
Q 044875          141 V-EYGMG---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       141 i-e~~~~---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                      + ||+.+                           ..++.++||||||+++||+++|+.||....... .+..........
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~  251 (360)
T 3e3p_A          173 LCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLGCP  251 (360)
T ss_dssp             ECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCC
T ss_pred             EeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcCCC
Confidence            6 44432                           236889999999999999999999997643221 122222211111


Q ss_pred             --chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          193 --QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       193 --~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        .....+++..............-..............+.+++..||+.||++|||+.++++
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence              1111111100000000000000000011111134667899999999999999999999984

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.94  E-value=3.3e-28  Score=201.60  Aligned_cols=165  Identities=19%  Similarity=0.332  Sum_probs=120.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCC-------eEEEEeecCc-------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQ-------TVVSVRDFKP-------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-------~~vavK~l~~-------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++       ..+|+|.+..                                     
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   87 (289)
T 4fvq_A            8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN   87 (289)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred             hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence            46677789999999999999986555       5799994422                                     


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc--------eee-e
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--------THV-E  142 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~--------~~i-e  142 (268)
                                               .....++.+++.||.|||+.+   ++||||||+||+++.+..        .++ +
T Consensus        88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D  164 (289)
T 4fvq_A           88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSD  164 (289)
T ss_dssp             EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred             EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeeecc
Confidence                                     345678999999999999988   999999999999988775        444 5


Q ss_pred             eccC------------------------CCcCccccEeechHHHHHHHhCCC-CCCcccccccchhhHhhhhCccchhhh
Q 044875          143 YGMG------------------------NQFSTNGDVYSYGKLLLEIFTGKR-STSDMFTEGLGLHNFVKMAVPDQISEV  197 (268)
Q Consensus       143 ~~~~------------------------~~~~~~~Dv~s~G~vl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (268)
                      |+.+                        ..++.++||||||+++||+++|.. |+...... . .......  ...... 
T Consensus       165 fg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~-~-~~~~~~~--~~~~~~-  239 (289)
T 4fvq_A          165 PGISITVLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ-R-KLQFYED--RHQLPA-  239 (289)
T ss_dssp             CCSCTTTSCHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-H-HHHHHHT--TCCCCC-
T ss_pred             CcccccccCccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH-H-HHHHhhc--cCCCCC-
Confidence            5543                        346889999999999999999554 44432111 1 0000000  000000 


Q ss_pred             cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          198 LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       198 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                                 .....+.+++..||+.||++|||+.++++.|+++..
T Consensus       240 ---------------------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          240 ---------------------------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             ---------------------------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             ---------------------------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence                                       112237788999999999999999999999998754

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=1.6e-28  Score=207.18  Aligned_cols=185  Identities=24%  Similarity=0.314  Sum_probs=126.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||++++    ..+++.||+|.+..                                        
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5667778999999999999994    55789999994322                                        


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ ||+..     
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  179 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLLPL  179 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence                                    346778899999999999988   999999999999998887777 44432     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++||||+|++++|+++|+.|+.........  .+.............+..
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  257 (327)
T 3lxl_A          180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR--MMGCERDVPALSRLLELL  257 (327)
T ss_dssp             TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHH--HCC----CCHHHHHHHHH
T ss_pred             CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhh--hcccccccccHHHHHHHh
Confidence                                     22467899999999999999999998643221000  000000000011111000


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      ....             ....+..++..+.+++..||+.||++|||+.++++.|+.+.....
T Consensus       258 ~~~~-------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          258 EEGQ-------------RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             HTTC-------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             hccc-------------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            0000             000111445678899999999999999999999999999876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.7e-27  Score=200.66  Aligned_cols=164  Identities=23%  Similarity=0.322  Sum_probs=122.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||++....+++.+|+|.+.                                            
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~   83 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI   83 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence            367788889999999999999999899999999332                                            


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC--CCceee-eeccC---------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN--DMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~--~~~~~i-e~~~~---------  146 (268)
                                       +.....++.+++.|+.|||+.+   ++||||||+||+++.  +...++ ||+.+         
T Consensus        84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~  160 (321)
T 1tki_A           84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF  160 (321)
T ss_dssp             CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEE
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCcc
Confidence                             1346789999999999999988   999999999999986  555555 44432         


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++||||+|+++||+++|..||......  .............     +...       
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~-----~~~~-------  226 (321)
T 1tki_A          161 RLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMNAEYTF-----DEEA-------  226 (321)
T ss_dssp             EEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCCC-----CHHH-------
T ss_pred             ccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH--HHHHHHHcCCCCC-----Chhh-------
Confidence                             23578999999999999999999999753221  1111111111000     0000       


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ....+.++.+++..||+.||++|||+.++++
T Consensus       227 -------------~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          227 -------------FKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -------------hccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                         0023456788999999999999999999986

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.94  E-value=1.2e-27  Score=197.36  Aligned_cols=169  Identities=21%  Similarity=0.405  Sum_probs=127.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|... ++..+|+|.+..                                           
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~   90 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYME   90 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCT
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecCC
Confidence            356777889999999999999986 677899994432                                           


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..           
T Consensus        91 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  167 (279)
T 1qpc_A           91 NGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR  167 (279)
T ss_dssp             TCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC
T ss_pred             CCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc
Confidence                              345688999999999999988   999999999999998887776 44322           


Q ss_pred             -----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ..++.++||||||++++|+++ |+.||......  .............            .. 
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~~------------~~-  232 (279)
T 1qpc_A          168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERGYRMV------------RP-  232 (279)
T ss_dssp             TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCC------------CC-
T ss_pred             cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcccCCC------------Cc-
Confidence                             235678999999999999999 89998753221  1111111111000            00 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                     ...+..+.+++..||+.||++|||+.++++.|+++....
T Consensus       233 ---------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          233 ---------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             ---------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             ---------------ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence                           023456888999999999999999999999999987654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=2.4e-27  Score=201.94  Aligned_cols=167  Identities=19%  Similarity=0.296  Sum_probs=123.0

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...+.|...+.||+|+||.||+|....+++.||+|.+..                                         
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~  129 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL  129 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence            345678888999999999999999988899999994322                                         


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eecc---------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGM---------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~---------  145 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.   +...++ ||+.         
T Consensus       130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  206 (349)
T 2w4o_A          130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL  206 (349)
T ss_dssp             CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence                              346788999999999999988   999999999999975   555555 4432         


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++||||||+++||+++|..||................... ...+.    .      
T Consensus       207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~-~~~~~----~------  275 (349)
T 2w4o_A          207 MKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYY-FISPW----W------  275 (349)
T ss_dssp             ------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCC-CCTTT----T------
T ss_pred             cccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCc-cCCch----h------
Confidence                             2357889999999999999999999997533221111111111100 00000    0      


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ...+..+.+++..||+.||++|||+.++++
T Consensus       276 ---------------~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          276 ---------------DEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             ---------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ---------------hhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                           023445788999999999999999999885

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=2.1e-28  Score=205.85  Aligned_cols=182  Identities=23%  Similarity=0.324  Sum_probs=127.7

Q ss_pred             CcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc-------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ...+.||+|+||.||++.+    ..+++.||+|.+..                                           
T Consensus        34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv  113 (318)
T 3lxp_A           34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV  113 (318)
T ss_dssp             EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred             hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence            6678899999999988765    34688999994432                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ ||+..         
T Consensus       114 ~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  190 (318)
T 3lxp_A          114 MEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY  190 (318)
T ss_dssp             ECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE
T ss_pred             EecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccccccc
Confidence                                345778999999999999988   999999999999999887777 44432         


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVA  204 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~  204 (268)
                                           ..++.++||||+|++++|+++|+.|+............+..... ...+...++.....
T Consensus       191 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (318)
T 3lxp_A          191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERL  270 (318)
T ss_dssp             EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCC
T ss_pred             cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCC
Confidence                                 23456889999999999999999998643221100000000000 00011111110000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                      .                .+..++..+.+++..||+.||++|||+.++++.|+.+.+.+..
T Consensus       271 ~----------------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          271 P----------------RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             C----------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             C----------------CCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            0                1114456789999999999999999999999999999988764

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.94  E-value=1e-27  Score=196.30  Aligned_cols=166  Identities=22%  Similarity=0.412  Sum_probs=125.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|... ++..+|+|.+..                                            
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   86 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME   86 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence            45667788999999999999997 678899994332                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..            
T Consensus        87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (267)
T 3t9t_A           87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  163 (267)
T ss_dssp             TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred             CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence                             345778899999999999988   999999999999988777766 33321            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..++.++||||+|++++|+++ |+.||......  ..............+              
T Consensus       164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~i~~~~~~~~~--------------  227 (267)
T 3t9t_A          164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS--EVVEDISTGFRLYKP--------------  227 (267)
T ss_dssp             STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHTTCCCCCC--------------
T ss_pred             cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHH--HHHHHHhcCCcCCCC--------------
Confidence                            346778999999999999999 89998753221  111111111100000              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                    ......+.+++..||+.||++|||+.++++.|+++.+
T Consensus       228 --------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          228 --------------RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             --------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             --------------ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                          0223457889999999999999999999999999876

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.1e-27  Score=200.55  Aligned_cols=187  Identities=20%  Similarity=0.311  Sum_probs=124.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE   82 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence            567778899999999999999988899999994422                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.+          
T Consensus        83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  159 (311)
T 4agu_A           83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYY  159 (311)
T ss_dssp             CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred             eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCccccc
Confidence                               345678899999999999988   999999999999998887776 34321          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Cccchhhhc-chhhhcC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPDQISEVL-DPLFVAG  205 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~-d~~~~~~  205 (268)
                                        ..++.++||||+|++++|+++|+.||........ ........  ..+.....+ .......
T Consensus       160 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (311)
T 4agu_A          160 DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTNQYFSG  238 (311)
T ss_dssp             ------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred             CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhccccccccccccccccccc
Confidence                              3468899999999999999999999975432211 11111100  000000000 0000000


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .....+...  ..........+..+.+++..||+.||++|||++++++
T Consensus       239 ~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          239 VKIPDPEDM--EPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CCCCCCSSC--CCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             CcCCCcccc--chhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000000000  0000000133456889999999999999999999984

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=1.4e-27  Score=202.64  Aligned_cols=176  Identities=21%  Similarity=0.325  Sum_probs=128.2

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc-----------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP-----------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~-----------------------------------   96 (268)
                      ....++|...+.||+|+||.||+|..     ..++..||+|.+..                                   
T Consensus        41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  120 (344)
T 1rjb_A           41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL  120 (344)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence            33457788889999999999999997     23567899994321                                   


Q ss_pred             ---------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecC
Q 044875           97 ---------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCD  125 (268)
Q Consensus        97 ---------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~d  125 (268)
                                                                         .....++.+++.||.|||+.+   ++|||
T Consensus       121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~D  197 (344)
T 1rjb_A          121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRD  197 (344)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETT
T ss_pred             CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCC
Confidence                                                               123568899999999999988   99999


Q ss_pred             CCCCccccCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCc
Q 044875          126 SKPSNILLDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSD  174 (268)
Q Consensus       126 lk~~nill~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~  174 (268)
                      |||+||+++.++..++ +|+.+                             ..++.++||||||+++||+++ |..||..
T Consensus       198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  277 (344)
T 1rjb_A          198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG  277 (344)
T ss_dssp             CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence            9999999998887777 44432                             346788999999999999998 9999975


Q ss_pred             ccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          175 MFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                      ..... ..............+                            ...+..+..++..||+.||++|||+.++++.
T Consensus       278 ~~~~~-~~~~~~~~~~~~~~~----------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          278 IPVDA-NFYKLIQNGFKMDQP----------------------------FYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             CCCSH-HHHHHHHTTCCCCCC----------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCcHH-HHHHHHhcCCCCCCC----------------------------CCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            43221 111111111111000                            0234568889999999999999999999999


Q ss_pred             HHHhHHHHhh
Q 044875          255 LQTVKSTLLR  264 (268)
Q Consensus       255 L~~l~~~~~~  264 (268)
                      |+.+......
T Consensus       329 l~~~~~~~~~  338 (344)
T 1rjb_A          329 LGCQLADAEE  338 (344)
T ss_dssp             HHHHC-----
T ss_pred             HHHHHHHHHH
Confidence            9988766543

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.94  E-value=2.7e-28  Score=203.35  Aligned_cols=180  Identities=19%  Similarity=0.339  Sum_probs=124.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      +.|...+.||+|+||.||+|++    ..+++.||+|.+..                                        
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            3466678899999999999993    55789999994432                                        


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.+    
T Consensus       101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  177 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIE  177 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred             EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECccccccccc
Confidence                                     345678999999999999988   999999999999988887776 44432    


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-chhhhcc
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QISEVLD  199 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  199 (268)
                                                ..++.++||||+|++++|+++|+.|+......   ........... ...... 
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~-  253 (302)
T 4e5w_A          178 TDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL---FLKMIGPTHGQMTVTRLV-  253 (302)
T ss_dssp             TTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCGGGHHHHHH-
T ss_pred             CCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhH---HhhccCCcccccCHHHHH-
Confidence                                      23456899999999999999999886532110   00000000000 000000 


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                      ..+....            ....+...+..+.+++..||+.||++|||+.++++.|+.+.
T Consensus       254 ~~~~~~~------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          254 NTLKEGK------------RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             HHHHTTC------------CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHhccC------------CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            0000000            00011134566889999999999999999999999999875

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.94  E-value=1.3e-27  Score=206.57  Aligned_cols=159  Identities=21%  Similarity=0.377  Sum_probs=115.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...+.||+|+||.||++... +++.||+|.+..                                             
T Consensus        57 ~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           57 IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             ceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            4778889999999999999987 488999994321                                             


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++. ...++ ||+.+          
T Consensus       136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~-~~~kl~DFG~a~~~~~~~~~~  211 (390)
T 2zmd_A          136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV  211 (390)
T ss_dssp             ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEESS-SCEEECCCSSSCCC-------
T ss_pred             ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEEC-CeEEEEecCccccccCCCccc
Confidence                               245678899999999999988   999999999999965 44444 44432          


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                    ..++.++|||||||++||+++|+.||.........+.            .
T Consensus       212 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~------------~  279 (390)
T 2zmd_A          212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLH------------A  279 (390)
T ss_dssp             --CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH------------H
T ss_pred             cCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHH------------H
Confidence                                          1467789999999999999999999975322111111            1


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+++......+.                .....+.+++..||+.||.+|||+.++++
T Consensus       280 ~~~~~~~~~~~~----------------~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          280 IIDPNHEIEFPD----------------IPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHCTTSCCCCCC----------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhCccccCCCCc----------------cchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            111111100110                11345788999999999999999999984

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.94  E-value=1.1e-27  Score=202.88  Aligned_cols=159  Identities=24%  Similarity=0.393  Sum_probs=121.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   88 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI   88 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            57788899999999999999998899999999432                                             


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                        +.....++.+++.|+.|||+.+   ++||||||+||+++.++..++ ||+.+          
T Consensus        89 E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~  165 (336)
T 3h4j_B           89 EYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK  165 (336)
T ss_dssp             CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC
T ss_pred             ECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc
Confidence                              1356788999999999999998   999999999999999988877 55533          


Q ss_pred             ----------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..+ +.++||||+|+++||+++|+.||........  ......... ..++             
T Consensus       166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~~i~~~~~-~~p~-------------  229 (336)
T 3h4j_B          166 TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FKKVNSCVY-VMPD-------------  229 (336)
T ss_dssp             CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BCCCCSSCC-CCCT-------------
T ss_pred             cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HHHHHcCCC-CCcc-------------
Confidence                            122 5789999999999999999999975322110  000000000 0000             


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ..+..+.+++..||+.||.+|||++++++
T Consensus       230 ---------------~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          230 ---------------FLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             ---------------TSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             ---------------cCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                           22345778999999999999999999974

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.94  E-value=2.9e-27  Score=203.00  Aligned_cols=139  Identities=8%  Similarity=0.034  Sum_probs=97.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------------------------CCcCcc
Q 044875          100 LSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------------------------NQFSTN  152 (268)
Q Consensus       100 ~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------------------------~~~~~~  152 (268)
                      ..++.+++.||+|||+.+   ++||||||+|||++.++..++ |||.+                          ..++.+
T Consensus       197 ~~i~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          197 HILTAQLIRLAANLQSKG---LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHHHHHHHHTT---EEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHHHHHHHHCC---CccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCcc
Confidence            456689999999999988   999999999999999988887 44422                          357889


Q ss_pred             ccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHH
Q 044875          153 GDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILK  232 (268)
Q Consensus       153 ~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
                      +||||||+++||+++|+.||............  ....    ............                ....+..+.+
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~----------------~~~~~~~~~~  331 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWK--RPSL----RVPGTDSLAFGS----------------CTPLPDFVKT  331 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCC--BCCT----TSCCCCSCCCTT----------------SSCCCHHHHH
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCcccccchh--hhhh----hhccccccchhh----------------ccCCCHHHHH
Confidence            99999999999999999999864322111000  0000    000000000000                0023456888


Q ss_pred             HHHHcCCCCCCCCCChHHHH--HHHHHhHHHHh
Q 044875          233 IRVVCSIKSPQERMDTSDVV--NNLQTVKSTLL  263 (268)
Q Consensus       233 l~~~C~~~~p~~RPs~~~v~--~~L~~l~~~~~  263 (268)
                      ++..||+.||++|||+.+++  .+++++.....
T Consensus       332 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  364 (371)
T 3q60_A          332 LIGRFLNFDRRRRLLPLEAMETPEFLQLQNEIS  364 (371)
T ss_dssp             HHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHH
T ss_pred             HHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHh
Confidence            99999999999999999998  47777766544

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.4e-27  Score=198.55  Aligned_cols=170  Identities=19%  Similarity=0.316  Sum_probs=126.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  113 (309)
T 2h34_A           34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDM  113 (309)
T ss_dssp             CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEE
Confidence            778888999999999999999988899999995432                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.          
T Consensus       114 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  190 (309)
T 2h34_A          114 RLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT  190 (309)
T ss_dssp             ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC----------
T ss_pred             EecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccccccc
Confidence                                345788999999999999988   999999999999998877766 3332          


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        +..++.++||||||+++||+++|+.||......  .+........+. . ....        
T Consensus       191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~-~-~~~~--------  258 (309)
T 2h34_A          191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPR-P-STVR--------  258 (309)
T ss_dssp             ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCC-G-GGTS--------
T ss_pred             cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCC-c-cccC--------
Confidence                              234677999999999999999999999753221  111111111110 0 0000        


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-ChHHHHHHHHHhHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-DTSDVVNNLQTVKST  261 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~~v~~~L~~l~~~  261 (268)
                                      ...+..+.+++..||+.||++|| +++++++.|+.....
T Consensus       259 ----------------~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~  297 (309)
T 2h34_A          259 ----------------PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT  297 (309)
T ss_dssp             ----------------TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred             ----------------CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence                            02344578899999999999999 899999999876543

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=206.59  Aligned_cols=193  Identities=13%  Similarity=0.169  Sum_probs=130.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~   88 (396)
T 4eut_A            9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM   88 (396)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence            457777899999999999999988899999994321                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc----CCCCceee-eeccC--
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL----DNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill----~~~~~~~i-e~~~~--  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||++    +.+...++ ||+.+  
T Consensus        89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence                                   345778999999999999988   9999999999998    55555555 44433  


Q ss_pred             --------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccch--hhHhhhhCcc
Q 044875          147 --------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL--HNFVKMAVPD  192 (268)
Q Consensus       147 --------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~  192 (268)
                                                      ..++.++||||||+++||+++|+.||..........  ........+.
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~  245 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS  245 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCT
T ss_pred             ccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCc
Confidence                                            124568999999999999999999997533222111  1111111111


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      .....+.........+...    ..............+..++..||+.||++||++.++++.++.+.+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          246 GAISGVQKAENGPIDWSGD----MPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             TCCEEEECSTTCCEEEESS----CCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             ccchhheeccCCCcccCcc----CCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            1100000000000000000    000111223667778899999999999999999999998887754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=2.4e-27  Score=198.51  Aligned_cols=171  Identities=24%  Similarity=0.403  Sum_probs=128.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~--------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|+.     ..+++.||+|.+..                                      
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~  101 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence            46777888999999999999985     34678999994321                                      


Q ss_pred             -------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc
Q 044875           97 -------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 -------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill  133 (268)
                                                                 .....++.+++.||.|||+.+   ++||||||+||++
T Consensus       102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~  178 (313)
T 1t46_A          102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (313)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence                                                       234578899999999999988   9999999999999


Q ss_pred             CCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccch
Q 044875          134 DNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGL  182 (268)
Q Consensus       134 ~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~  182 (268)
                      +.++..++ +|+.+                             ..++.++||||||++++|+++ |..||....... ..
T Consensus       179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~  257 (313)
T 1t46_A          179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KF  257 (313)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HH
T ss_pred             cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HH
Confidence            98887777 44422                             345778999999999999999 999987533221 11


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ...........            ..                ...+..+.+++..||+.||.+|||+.++++.|+++.++.
T Consensus       258 ~~~~~~~~~~~------------~~----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          258 YKMIKEGFRML------------SP----------------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHHHTCCCC------------CC----------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHhccCCCCC------------Cc----------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            11111111100            00                023456888999999999999999999999999987753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.94  E-value=8.5e-27  Score=205.60  Aligned_cols=190  Identities=17%  Similarity=0.233  Sum_probs=127.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            3678888999999999999999988999999994421                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+      
T Consensus       141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  217 (464)
T 3ttj_A          141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS  217 (464)
T ss_dssp             EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred             eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence                                   234568999999999999998   999999999999999888877 45432      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhcchhh--
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVLDPLF--  202 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~--  202 (268)
                                          ..++.++||||+||+++|+++|+.||.+..... .+.........+  .....+.+..  
T Consensus       218 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~~  296 (464)
T 3ttj_A          218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRN  296 (464)
T ss_dssp             CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHHH
T ss_pred             cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhhh
Confidence                                357889999999999999999999997543211 111111111100  0000000000  


Q ss_pred             --hcCCC---ccchhh-hHHhh--hhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 --VAGGE---EEGEKT-AEENI--KKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 --~~~~~---~~~~~~-~~~~~--~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        .....   ...+.. ++..+  ...........+.+++..|++.||++|||++++++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          297 YVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence              00000   000000 00000  00111233567899999999999999999999985

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.94  E-value=2.4e-27  Score=195.61  Aligned_cols=160  Identities=19%  Similarity=0.270  Sum_probs=121.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||+|....++..+|+|.+.                                            
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            366777889999999999999999889999999331                                            


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                          ......++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+.         
T Consensus        88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~  164 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR  164 (279)
T ss_dssp             ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence                                1345678999999999999988   999999999999998887777 4442         


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      +..++.++||||+|++++|+++|..||.......  .......... ..+              
T Consensus       165 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~-~~~--------------  227 (279)
T 3fdn_A          165 TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE--TYKRISRVEF-TFP--------------  227 (279)
T ss_dssp             ---CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTCC-CCC--------------
T ss_pred             cccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH--HHHHHHhCCC-CCC--------------
Confidence                            2346789999999999999999999997532111  0010100000 000              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ......+.+++..||+.||++|||+.++++
T Consensus       228 --------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          228 --------------DFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             --------------TTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             --------------CcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                          022345778999999999999999999995

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=3e-27  Score=200.33  Aligned_cols=159  Identities=21%  Similarity=0.357  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~   84 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence            56778899999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.          
T Consensus        85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  161 (337)
T 1o6l_A           85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence                               1345678899999999999988   999999999999998887777 4442          


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       +..++.++|+||+|+++||+++|+.||......  .+......... .++             
T Consensus       162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-~~p-------------  225 (337)
T 1o6l_A          162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEEI-RFP-------------  225 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCC-------------
T ss_pred             ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC-CCC-------------
Confidence                             245788999999999999999999999753211  11111111000 000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                     .....++.+++..||+.||++||     +++++++
T Consensus       226 ---------------~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          226 ---------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             ---------------TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ---------------CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                           02234578899999999999999     8888874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.94  E-value=6.2e-28  Score=203.02  Aligned_cols=177  Identities=21%  Similarity=0.368  Sum_probs=130.4

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc-----------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP-----------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~-----------------------------   96 (268)
                      +..+++....++|...+.||+|+||.||+|...     .++..||+|.+..                             
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            344455566678888899999999999999875     3468899994432                             


Q ss_pred             -------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc
Q 044875           97 -------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 -------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill  133 (268)
                                                                 .....++.+++.||.|||+.+   ++||||||+||++
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEE
Confidence                                                       123457889999999999988   9999999999999


Q ss_pred             CCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccch
Q 044875          134 DNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGL  182 (268)
Q Consensus       134 ~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~  182 (268)
                      +.++..++ +|+..                             ..++.++||||+|+++||+++ |..||......  ..
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~  249 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE--QV  249 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHH--HH
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHH--HH
Confidence            99887777 44422                             346788999999999999999 88888753221  11


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      ...........            .                +...+..+.+++..||+.||++|||+.++++.|+++.+
T Consensus       250 ~~~~~~~~~~~------------~----------------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          250 LRFVMEGGLLD------------K----------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHTTCCCC------------C----------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHcCCcCC------------C----------------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            11111110000            0                01334558889999999999999999999999987643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=1.6e-27  Score=199.78  Aligned_cols=167  Identities=21%  Similarity=0.350  Sum_probs=123.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.||+|.+..                                            
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~   91 (311)
T 3ork_A           12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   91 (311)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence            678888999999999999999988999999994421                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+...++ ||+..     
T Consensus        92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~  168 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD  168 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred             EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence                                    345788999999999999988   999999999999998887777 45432     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++||||||+++||+++|+.||.......... .........  ....   
T Consensus       169 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~-~~~~~~~~~--~~~~---  242 (311)
T 3ork_A          169 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY-QHVREDPIP--PSAR---  242 (311)
T ss_dssp             -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHCCCCC--HHHH---
T ss_pred             cccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCCCC--cccc---
Confidence                                     346778999999999999999999997532221111 111100000  0000   


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH-HHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV-NNLQT  257 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~-~~L~~  257 (268)
                                           ....+..+.+++..||+.||++||++.+++ ..+..
T Consensus       243 ---------------------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  278 (311)
T 3ork_A          243 ---------------------HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR  278 (311)
T ss_dssp             ---------------------STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             ---------------------cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHH
Confidence                                 002345688899999999999999877765 34433

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.5e-27  Score=196.25  Aligned_cols=171  Identities=23%  Similarity=0.383  Sum_probs=127.1

Q ss_pred             CCCcCC-cccCCCcceEEEEEec--CCCeEEEEeecCc------------------------------------------
Q 044875           62 GFSSAN-IIGAGSFGSVCKGILD--PDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~-~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~------------------------------------------   96 (268)
                      +|.... .||+|+||.||+|...  .++..||+|.+..                                          
T Consensus        10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~e   89 (287)
T 1u59_A           10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME   89 (287)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEEE
Confidence            333444 7999999999999863  4678899994432                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..         
T Consensus        90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~  166 (287)
T 1u59_A           90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  166 (287)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence                                345788999999999999988   999999999999998877766 44322         


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ..++.++||||||++++|+++ |+.||......  ..............          
T Consensus       167 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~~~~~~----------  234 (287)
T 1u59_A          167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRMEC----------  234 (287)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCCCCC----------
T ss_pred             eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcCCcCCC----------
Confidence                                 235678999999999999998 99999753221  11111111111000          


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhhc
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRC  265 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~~  265 (268)
                                        +...+..+.+++..||+.||++||++.++++.|+.+..+....
T Consensus       235 ------------------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          235 ------------------PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             ------------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             ------------------CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence                              0133456889999999999999999999999999998876543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=5.7e-28  Score=203.80  Aligned_cols=181  Identities=22%  Similarity=0.333  Sum_probs=128.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEe----cCCCeEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL----DPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~----~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ++|...+.||+|+||.||++.+    ..+++.||+|.+..                                        
T Consensus        41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  120 (326)
T 2w1i_A           41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK  120 (326)
T ss_dssp             GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred             HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence            4566778899999999999984    45789999994322                                        


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.+     
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~  197 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQ  197 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence                                    345678899999999999988   999999999999998877766 44322     


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-----chhh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-----QISE  196 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~  196 (268)
                                               ..++.++||||||++++|+++|..|+......   ...........     .+.+
T Consensus       198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  274 (326)
T 2w1i_A          198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQGQMIVFHLIE  274 (326)
T ss_dssp             SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHH---HHHHHCTTCCTHHHHHHHHH
T ss_pred             cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHH---HHHhhccccchhhhHHHHHH
Confidence                                     12467899999999999999999887632111   00000000000     0001


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                      .+......                ..+..++..+.+++..||+.||++|||+.++++.|+.+.+.+.
T Consensus       275 ~~~~~~~~----------------~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          275 LLKNNGRL----------------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             HHHTTCCC----------------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HhhcCCCC----------------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence            10000000                0011345678899999999999999999999999999998763

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=6.3e-27  Score=198.27  Aligned_cols=153  Identities=21%  Similarity=0.308  Sum_probs=119.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~  103 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGF  103 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCE
Confidence            567788899999999999999988999999994321                                            


Q ss_pred             --------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           97 --------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        97 --------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                                .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+   
T Consensus       104 ~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          104 FQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL  180 (335)
T ss_dssp             EEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence                                      335678999999999999988   999999999999999887777 44432   


Q ss_pred             -----------------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 -----------------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 -----------------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             ..+ +.++||||||+++||+++|+.||........       ...        .+  
T Consensus       181 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-------~~~--------~~--  243 (335)
T 3dls_A          181 ERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE-------AAI--------HP--  243 (335)
T ss_dssp             CTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT-------TCC--------CC--
T ss_pred             CCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh-------hcc--------CC--
Confidence                                   223 6789999999999999999999975221100       000        00  


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                          +.                .....+.+++..||+.||++|||+.++++
T Consensus       244 ----~~----------------~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          244 ----PY----------------LVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             ----SS----------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ----Cc----------------ccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                00                12345788999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.94  E-value=2.6e-27  Score=197.41  Aligned_cols=165  Identities=18%  Similarity=0.339  Sum_probs=120.0

Q ss_pred             CCCCcC-CcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ++|... +.||+|+||.||++....+++.||+|.+..                                           
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~   96 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC   96 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEee
Confidence            445544 679999999999999988899999993321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eeccC-----C
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGMG-----N  147 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~~-----~  147 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.   +...++ +|+.+     .
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  173 (299)
T 3m2w_A           97 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE  173 (299)
T ss_dssp             CCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTC
T ss_pred             cCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccccccccccc
Confidence                                345789999999999999988   999999999999997   566666 66654     5


Q ss_pred             CcCccccEeechHHHHHHHhCCCCCCcccccccc--hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          148 QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG--LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       148 ~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      .++.++||||+|+++||+++|+.||.........  ...........    ...+                     ....
T Consensus       174 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------------~~~~  228 (299)
T 3m2w_A          174 KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE----FPNP---------------------EWSE  228 (299)
T ss_dssp             GGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCS----SCHH---------------------HHTT
T ss_pred             cCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhcccc----CCch---------------------hccc
Confidence            6889999999999999999999999753221100  00000000000    0000                     0012


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+..+.+++..||+.||++|||+.++++
T Consensus       229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          229 VSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            3456888999999999999999999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.94  E-value=8.3e-28  Score=203.23  Aligned_cols=186  Identities=18%  Similarity=0.334  Sum_probs=124.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  104 (331)
T 4aaa_A           25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE  104 (331)
T ss_dssp             GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence            456777899999999999999988899999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.+          
T Consensus       105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  181 (331)
T 4aaa_A          105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  181 (331)
T ss_dssp             CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred             cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCcccc
Confidence                               345678999999999999988   999999999999998887777 44422          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC--ccchhhhcc--hhhhc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV--PDQISEVLD--PLFVA  204 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~d--~~~~~  204 (268)
                                        ..++.++||||+|+++||+++|+.||........ +........  .+.....++  +....
T Consensus       182 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (331)
T 4aaa_A          182 DDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ-LYHIMMCLGNLIPRHQELFNKNPVFAG  260 (331)
T ss_dssp             --CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHHCGGGTT
T ss_pred             CCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCChhhhhHhhhcccccc
Confidence                              2467889999999999999999999975432211 111111100  000000000  00000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....   ...............+..+.+++..||+.||++|||++++++
T Consensus       261 ~~~~---~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          261 VRLP---EIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             CCCC---CCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ccCc---cccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            0000   000000000001133567889999999999999999999984

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=3.9e-27  Score=193.81  Aligned_cols=162  Identities=19%  Similarity=0.298  Sum_probs=121.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   86 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence            467777899999999999999988899999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+..           
T Consensus        87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  163 (276)
T 2yex_A           87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  163 (276)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhc
Confidence                              346789999999999999988   999999999999998877766 33321           


Q ss_pred             ------------------CC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ------------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        .. ++.++||||+|++++|+++|+.||............+........      +       
T Consensus       164 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------~-------  230 (276)
T 2yex_A          164 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN------P-------  230 (276)
T ss_dssp             BCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTST------T-------
T ss_pred             ccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccC------c-------
Confidence                              12 256899999999999999999999754332222222221110000      0       


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     .......+.+++..||+.||++|||++++++
T Consensus       231 ---------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          231 ---------------WKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             ---------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ---------------hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence                           0022345778999999999999999999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.94  E-value=4.1e-27  Score=195.94  Aligned_cols=170  Identities=24%  Similarity=0.403  Sum_probs=123.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------   96 (268)
                      ..|...+.||+|+||.||+|....+   ...+|+|.+..                                         
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  104 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV  104 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence            3466678899999999999997432   34688884321                                         


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+      
T Consensus       105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECccccccccccc
Confidence                                   345678899999999999988   999999999999999887777 44432      


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                               ..++.++||||+|++++|+++ +.+|+......  ..............+     
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----  254 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQP-----  254 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHHHTTCCCCCC-----
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhcCCCCCCC-----
Confidence                                     245778999999999999999 55555542211  111111111110000     


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                             ...+..+.+++..||+.||++|||+.++++.|+++...+.
T Consensus       255 -----------------------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          255 -----------------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             -----------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             -----------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence                                   0223458889999999999999999999999999987653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.94  E-value=4.6e-27  Score=203.71  Aligned_cols=164  Identities=18%  Similarity=0.345  Sum_probs=120.1

Q ss_pred             CCCcC-CcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           62 GFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        62 ~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +|... +.||+|+||.||++....+++.||+|.+.                                             
T Consensus        62 ~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~  141 (400)
T 1nxk_A           62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL  141 (400)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             cceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeC
Confidence            34443 57999999999999998899999999332                                             


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eecc--------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGM--------  145 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~--------  145 (268)
                                        +.....++.+++.||.|||+.+   ++||||||+||+++.   ++..++ |||.        
T Consensus       142 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~  218 (400)
T 1nxk_A          142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  218 (400)
T ss_dssp             CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred             CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence                              1345779999999999999988   999999999999987   555666 4432        


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCccccccc--chhhHhhhhCccchhhhcchhhhcC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL--GLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                        ...++.++|||||||++||+++|+.||........  ..............    .+..   
T Consensus       219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~----~~~~---  291 (400)
T 1nxk_A          219 SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP----NPEW---  291 (400)
T ss_dssp             --------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC----TTTT---
T ss_pred             ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCC----Cccc---
Confidence                              34578899999999999999999999975432211  11111111110000    0000   


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        .....++.+++..||+.||++|||+.++++
T Consensus       292 ------------------~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          292 ------------------SEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             ------------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ------------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                              023456788999999999999999999985

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.6e-27  Score=201.03  Aligned_cols=186  Identities=16%  Similarity=0.263  Sum_probs=124.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            457777899999999999999988899999994421                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------------  145 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------------  145 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.            
T Consensus        82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~  158 (324)
T 3mtl_A           82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYD  158 (324)
T ss_dssp             CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred             cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCCccccc
Confidence                              335678899999999999988   999999999999998887777 3332            


Q ss_pred             ----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh---CccchhhhcchhhhcCC
Q 044875          146 ----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA---VPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 ----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~  206 (268)
                                      ...++.++||||+|++++|+++|+.||....... .+.......   ....+....+.......
T Consensus       159 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  237 (324)
T 3mtl_A          159 NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEFKTY  237 (324)
T ss_dssp             ----CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred             cccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcchhhccc
Confidence                            1346889999999999999999999997643221 111111111   11111111111000000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...  .... .............+.+++..|++.||++|||++++++
T Consensus       238 ~~~--~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          238 NYP--KYRA-EALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             CCC--CCCC-CCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccc--cccc-hhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            000  0000 0000000123456788999999999999999999985

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=2.6e-27  Score=201.88  Aligned_cols=160  Identities=22%  Similarity=0.310  Sum_probs=122.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||+++...+++.+|+|.+.                                            
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  101 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF  101 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence            378888899999999999999998889999999432                                            


Q ss_pred             ---------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC------
Q 044875           96 ---------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN------  147 (268)
Q Consensus        96 ---------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~------  147 (268)
                                           +.....++.+++.||.|||+.+   ++||||||+|||++.++..++ ||+.+.      
T Consensus       102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence                                 1345678999999999999988   999999999999999888877 666432      


Q ss_pred             ---------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          148 ---------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       148 ---------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                           .++.++|+||+|+++||+++|+.||......  .+......... ..+.          
T Consensus       179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~~~-~~p~----------  245 (353)
T 3txo_A          179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILNDEV-VYPT----------  245 (353)
T ss_dssp             -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT----------
T ss_pred             ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCC-CCCC----------
Confidence                                 2578899999999999999999999753221  11111111100 0000          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh------HHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT------SDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~------~~v~~  253 (268)
                                        .....+..++..|++.||.+||++      .++++
T Consensus       246 ------------------~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          246 ------------------WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ------------------TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ------------------CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence                              123457788999999999999998      66663

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=3e-27  Score=200.02  Aligned_cols=170  Identities=21%  Similarity=0.366  Sum_probs=126.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEec-------CCCeEEEEeecCc------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILD-------PDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~-------~~~~~vavK~l~~------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|...       .++..||+|.+..                                    
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  113 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  113 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence            367778889999999999999974       3567899994432                                    


Q ss_pred             -------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc
Q 044875           97 -------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 -------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill  133 (268)
                                                                 .....++.+++.||.|||+.+   ++|+||||+||++
T Consensus       114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll  190 (334)
T 2pvf_A          114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV  190 (334)
T ss_dssp             SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred             CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence                                                       123568899999999999988   9999999999999


Q ss_pred             CCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccch
Q 044875          134 DNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGL  182 (268)
Q Consensus       134 ~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~  182 (268)
                      +.++..++ +|+.+                             ..++.++||||||+++||+++ |..||......  .+
T Consensus       191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~  268 (334)
T 2pvf_A          191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--EL  268 (334)
T ss_dssp             CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HH
T ss_pred             cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--HH
Confidence            98887777 44422                             235678999999999999999 99999753221  11


Q ss_pred             hhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       183 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ............                            +..++..+.+++..||+.||++|||+.++++.|+++....
T Consensus       269 ~~~~~~~~~~~~----------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          269 FKLLKEGHRMDK----------------------------PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             HHHHHHTCCCCC----------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCC----------------------------CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            111111110000                            0133456888999999999999999999999999997654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=3.3e-27  Score=199.49  Aligned_cols=187  Identities=18%  Similarity=0.268  Sum_probs=123.6

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|....+++.||+|.+..                                          
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  111 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI  111 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence            34678888999999999999999988999999995532                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-----CCceee-eecc-----
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-----DMTTHV-EYGM-----  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-----~~~~~i-e~~~-----  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.     +...++ ||+.     
T Consensus       112 ~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          112 FEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             EECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             EecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence                                345678999999999999988   999999999999953     333555 3321     


Q ss_pred             ----------------------C-CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc--chhhhcc
Q 044875          146 ----------------------G-NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD--QISEVLD  199 (268)
Q Consensus       146 ----------------------~-~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~d  199 (268)
                                            + ..++.++||||+|++++|+++|+.||....... .+...... ..+.  .......
T Consensus       189 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (329)
T 3gbz_A          189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTWPGVTA  267 (329)
T ss_dssp             -----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred             CcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhhhhhhh
Confidence                                  1 347889999999999999999999997543221 11111111 1111  0000000


Q ss_pred             -hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 -PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       +............    .............+.+++..||+.||++|||++++++
T Consensus       268 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          268 LPDWKQSFPKFRGK----TLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             STTCCTTCCCCCCC----CHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhhhccc----cHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence             0000000000000    0000011123456789999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=5.6e-27  Score=194.67  Aligned_cols=162  Identities=20%  Similarity=0.337  Sum_probs=117.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +++.....||+|+||.||+|....+++.||+|.+..                                            
T Consensus        22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~  101 (295)
T 2clq_A           22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV  101 (295)
T ss_dssp             CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence            345556689999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMG--------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~--------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++. +...++ +|+..        
T Consensus       102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~  178 (295)
T 2clq_A          102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP  178 (295)
T ss_dssp             SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred             CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence                                223557889999999999988   999999999999987 666665 34322        


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..++.++||||||+++||+++|+.||.....................+.          
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~----------  248 (295)
T 2clq_A          179 CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP----------  248 (295)
T ss_dssp             --CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC----------
T ss_pred             cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccccccccc----------
Confidence                                 1257789999999999999999999975322111111100000000000          


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        ...+..+.+++..||+.||++|||+.++++
T Consensus       249 ------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          249 ------------------ESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             ------------------TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ------------------ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                              123456788999999999999999999974

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.94  E-value=7.6e-27  Score=201.17  Aligned_cols=118  Identities=31%  Similarity=0.459  Sum_probs=95.6

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ....++|...+.||+|+||.||+|....+++.||+|.+..                                        
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  129 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN  129 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence            3445788888999999999999999988899999994432                                        


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC--CCceee-eeccC
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN--DMTTHV-EYGMG  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~--~~~~~i-e~~~~  146 (268)
                                                 .....++.+++.||.|||... ..++||||||+||+++.  +...++ |||.+
T Consensus       130 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a  208 (382)
T 2vx3_A          130 HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSAIKIVDFGSS  208 (382)
T ss_dssp             EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence                                       335678999999999999531 33999999999999954  455555 45432


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                              ..++.++|||||||++||+++|+.||...
T Consensus       209 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~  261 (382)
T 2vx3_A          209 CQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA  261 (382)
T ss_dssp             EETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             eecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                                    35788999999999999999999999854

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.93  E-value=4.8e-27  Score=198.19  Aligned_cols=168  Identities=23%  Similarity=0.413  Sum_probs=121.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|..     ..++..||+|.+..                                       
T Consensus        30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (327)
T 2yfx_A           30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF  109 (327)
T ss_dssp             GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcE
Confidence            6788889999999999999994     34677899995432                                       


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC---Cceee-e
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---MTTHV-E  142 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~---~~~~i-e  142 (268)
                                                    .....++.+++.||.|||+.+   ++||||||+||+++.+   ...++ +
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEECc
Confidence                                          235678899999999999988   9999999999999843   33444 3


Q ss_pred             ecc-----------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCcc
Q 044875          143 YGM-----------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       143 ~~~-----------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                      |+.                             ...++.++||||||+++||+++ |..||......  ............
T Consensus       187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~~~~  264 (327)
T 2yfx_A          187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ--EVLEFVTSGGRM  264 (327)
T ss_dssp             CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCCC
T ss_pred             cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHH--HHHHHHhcCCCC
Confidence            331                             2346789999999999999998 99998753221  111111111110


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ...                            ..++..+.+++..||+.||.+||++.++++.|+.+...
T Consensus       265 ~~~----------------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~  305 (327)
T 2yfx_A          265 DPP----------------------------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD  305 (327)
T ss_dssp             CCC----------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CCC----------------------------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence            000                            02344588899999999999999999999999988754

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.93  E-value=7.6e-27  Score=196.05  Aligned_cols=176  Identities=21%  Similarity=0.311  Sum_probs=122.8

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC-------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK-------------------------------------   95 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-------------------------------------   95 (268)
                      ..+.....++|...+.||+|+||.||+|....   .+|+|.+.                                     
T Consensus        25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~  101 (319)
T 2y4i_B           25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP  101 (319)
T ss_dssp             GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred             cccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence            34444455788889999999999999999853   37888332                                     


Q ss_pred             ---------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           96 ---------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        96 ---------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                                 ......++.+++.||.|||+.+   ++|+||||+||+++.+ ..++ +|+.. 
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~~~-~~~l~Dfg~~~  177 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFS  177 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC
T ss_pred             CceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEeCC-CEEEeecCCcc
Confidence                                       2456789999999999999988   9999999999999854 4444 55421 


Q ss_pred             ----------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHh
Q 044875          147 ----------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFV  186 (268)
Q Consensus       147 ----------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~  186 (268)
                                                              ..++.++||||||+++||+++|+.||.......  .....
T Consensus       178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~--~~~~~  255 (319)
T 2y4i_B          178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA--IIWQM  255 (319)
T ss_dssp             ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH--HHHHH
T ss_pred             ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHh
Confidence                                                    235778999999999999999999997532221  11111


Q ss_pred             hhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       187 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                      .........   ..                        ..+..+.+++..||+.||++|||+.++++.|+.+.+...+
T Consensus       256 ~~~~~~~~~---~~------------------------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~  306 (319)
T 2y4i_B          256 GTGMKPNLS---QI------------------------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR  306 (319)
T ss_dssp             HTTCCCCCC---CS------------------------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred             ccCCCCCCC---cC------------------------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence            111110000   00                        1223478899999999999999999999999998876543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.93  E-value=4.8e-27  Score=194.75  Aligned_cols=179  Identities=17%  Similarity=0.312  Sum_probs=121.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.. .+++.+|+|.+..                                            
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEE
Confidence            4567778999999999999998 4789999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.           
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  157 (288)
T 1ob3_A           81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY  157 (288)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             ecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcccccc
Confidence                               235678999999999999988   999999999999998887777 3321           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhh-----hcch
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISE-----VLDP  200 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~-----~~d~  200 (268)
                                       ...++.++||||+|++++|+++|+.||....... .+..........   ....     ..++
T Consensus       158 ~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T 1ob3_A          158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDP  236 (288)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             ccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccccc
Confidence                             1347889999999999999999999997543221 111111111100   0000     0111


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ........     ...    .........+.+++..||+.||++|||++++++
T Consensus       237 ~~~~~~~~-----~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          237 NFTVYEPL-----PWE----SFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCCCCCCC-----CGG----GTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCc-----cHH----HHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11000000     000    000123456788999999999999999999874

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.93  E-value=6.1e-27  Score=202.21  Aligned_cols=190  Identities=19%  Similarity=0.219  Sum_probs=125.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~  116 (397)
T 1wak_A           37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN  116 (397)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred             CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence            678888899999999999999988999999994321                                            


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCC---------
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDM---------  137 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~---------  137 (268)
                                                   .....++.+++.||.|||+. +   ++||||||+|||++.+.         
T Consensus       117 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~~~~~  193 (397)
T 1wak_A          117 GTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRRLAAE  193 (397)
T ss_dssp             EEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHHHHHH
T ss_pred             CceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhhhhhh
Confidence                                         23567899999999999997 7   99999999999998664         


Q ss_pred             ----------------------------------------ceee-eeccC------------------------CCcCcc
Q 044875          138 ----------------------------------------TTHV-EYGMG------------------------NQFSTN  152 (268)
Q Consensus       138 ----------------------------------------~~~i-e~~~~------------------------~~~~~~  152 (268)
                                                              ..++ +|+.+                        ..++.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  273 (397)
T 1wak_A          194 ATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP  273 (397)
T ss_dssp             HC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred             hHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCCCCcH
Confidence                                                    3444 44432                        447889


Q ss_pred             ccEeechHHHHHHHhCCCCCCccccccc-----chhhHhhhhCc--cch-------hhhcchh--hhcCCCccchhh-hH
Q 044875          153 GDVYSYGKLLLEIFTGKRSTSDMFTEGL-----GLHNFVKMAVP--DQI-------SEVLDPL--FVAGGEEEGEKT-AE  215 (268)
Q Consensus       153 ~Dv~s~G~vl~el~tg~~p~~~~~~~~~-----~~~~~~~~~~~--~~~-------~~~~d~~--~~~~~~~~~~~~-~~  215 (268)
                      +|||||||++||+++|+.||........     .+.........  ...       .+.+...  +........... ..
T Consensus       274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (397)
T 1wak_A          274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV  353 (397)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred             HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence            9999999999999999999975432211     11111111100  000       0000000  000000000000 00


Q ss_pred             HhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          216 ENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       216 ~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..-......+....+.+++..||+.||++|||++++++
T Consensus       354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            00011123467788999999999999999999999975

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.93  E-value=6.8e-27  Score=201.20  Aligned_cols=160  Identities=24%  Similarity=0.355  Sum_probs=120.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus        15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~   94 (384)
T 4fr4_A           15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV   94 (384)
T ss_dssp             GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            56777889999999999999999899999999332                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+         
T Consensus        95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~  171 (384)
T 4fr4_A           95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI  171 (384)
T ss_dssp             CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCCCce
Confidence                               1345678999999999999998   999999999999999888777 34322         


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCccccccc-chhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL-GLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++|+||+|+++||+++|+.||........ .+......... ..+          
T Consensus       172 ~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~-~~p----------  240 (384)
T 4fr4_A          172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV-TYP----------  240 (384)
T ss_dssp             CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC-CCC----------
T ss_pred             eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc-CCC----------
Confidence                                2367899999999999999999999974322111 11111111000 000          


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-hHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-TSDVV  252 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~~v~  252 (268)
                                        ......+..++..||+.||.+||+ ++++.
T Consensus       241 ------------------~~~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          241 ------------------SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             ------------------TTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             ------------------CcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence                              022455888999999999999999 56655

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.93  E-value=4.5e-27  Score=194.27  Aligned_cols=164  Identities=16%  Similarity=0.286  Sum_probs=121.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.+|+|.+..                                           
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   84 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF   84 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence            3678888999999999999999988899999994321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eecc-------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYGM-------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~~-------  145 (268)
                                          .....++.+++.|+.|||+.+   ++||||||+||+++.+..   .++ +|+.       
T Consensus        85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A           85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence                                345678999999999999988   999999999999976544   444 4432       


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         +..++.++||||+|++++|+++|+.||......  .................    .    
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~----~----  231 (284)
T 3kk8_A          162 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPE----W----  231 (284)
T ss_dssp             CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCCTTT----T----
T ss_pred             ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHhccccCCchh----h----
Confidence                               234678999999999999999999999753221  11111111111000000    0    


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       ...+..+.+++..||+.||++|||+.++++
T Consensus       232 -----------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          232 -----------------DTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             -----------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----------------cccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                             022345788999999999999999999985

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.93  E-value=2.6e-27  Score=201.84  Aligned_cols=162  Identities=19%  Similarity=0.280  Sum_probs=118.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l  103 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM  103 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            45777889999999999999998899999999432                                             


Q ss_pred             -------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eecc-
Q 044875           96 -------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYGM-  145 (268)
Q Consensus        96 -------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~~-  145 (268)
                                               +.....++.+++.||.|||+.+   ++||||||+||+++.+..   .++ +|+. 
T Consensus       104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred             EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcce
Confidence                                     1234568899999999999988   999999999999986543   444 3332 


Q ss_pred             --------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          146 --------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       146 --------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                                ...++.++||||+|+++||+++|+.||.....   .+..........     .+
T Consensus       181 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~i~~~~~~-----~~  252 (351)
T 3c0i_A          181 IQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RLFEGIIKGKYK-----MN  252 (351)
T ss_dssp             EECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HHHHHHHHTCCC-----CC
T ss_pred             eEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HHHHHHHcCCCC-----CC
Confidence                                      23478899999999999999999999975321   111111111000     00


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +...                    ...+..+.+++..||+.||++|||+.++++
T Consensus       253 ~~~~--------------------~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          253 PRQW--------------------SHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHH--------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccc--------------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            0000                    022456788999999999999999999984

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.93  E-value=8.2e-27  Score=198.64  Aligned_cols=185  Identities=18%  Similarity=0.283  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   96 (351)
T 3mi9_A           17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   96 (351)
T ss_dssp             GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred             cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence            567788899999999999999988999999994321                                            


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+  
T Consensus        97 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~  173 (351)
T 3mi9_A           97 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA  173 (351)
T ss_dssp             CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence                                       345678999999999999988   999999999999998887777 44421  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh--hCcc-c
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM--AVPD-Q  193 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~-~  193 (268)
                                                    ..++.++||||||++++|+++|+.||........ +......  ..+. .
T Consensus       174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~  252 (351)
T 3mi9_A          174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQ-LALISQLCGSITPEV  252 (351)
T ss_dssp             CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTT
T ss_pred             ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChhh
Confidence                                          2367899999999999999999999985432211 1111111  1111 1


Q ss_pred             hhhhcchhhhcCCC---ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          194 ISEVLDPLFVAGGE---EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       194 ~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....-+........   ...... ......   ......+.+++..||+.||++|||++++++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          253 WPNVDNYELYEKLELVKGQKRKV-KDRLKA---YVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             STTGGGCGGGTSSCCCSSCCCCH-HHHHHH---HHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhcccccccccccCH-HHHhhh---ccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            11111000000000   000000 000000   011345788999999999999999999885

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.93  E-value=6.1e-27  Score=205.25  Aligned_cols=164  Identities=16%  Similarity=0.226  Sum_probs=119.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....+++.+|+|.+..                                           
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~   89 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF   89 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence            3567788899999999999999988999999993321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eeccC------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGMG------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~~------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.   +...++ |||.+      
T Consensus        90 E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~  166 (444)
T 3soa_A           90 DLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE  166 (444)
T ss_dssp             CCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred             EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence                                345678999999999999998   999999999999984   344555 44432      


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..++.++||||+|+++||+++|..||.+....  .+.............+.    .   
T Consensus       167 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~~~~~~~----~---  237 (444)
T 3soa_A          167 QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH--RLYQQIKAGAYDFPSPE----W---  237 (444)
T ss_dssp             CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCCCCCTTT----T---
T ss_pred             CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHhCCCCCCccc----c---
Confidence                                 35788999999999999999999999753211  11111111111100000    0   


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        ...+..+.+++..||+.||++|||+.++++
T Consensus       238 ------------------~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          238 ------------------DTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             ------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ------------------ccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence                              022345788999999999999999999985

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=9.2e-28  Score=209.87  Aligned_cols=174  Identities=16%  Similarity=0.204  Sum_probs=127.5

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      +.+.++...+++|...+.||+|+||+||+|+...+++.+|+|.+..                                  
T Consensus        64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  143 (437)
T 4aw2_A           64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF  143 (437)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence            3455666677899999999999999999999998899999994321                                  


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||
T Consensus       144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFG  220 (437)
T 4aw2_A          144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFG  220 (437)
T ss_dssp             ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchh
Confidence                                           335668899999999999988   999999999999999888887 444


Q ss_pred             cC---------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc
Q 044875          145 MG---------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP  191 (268)
Q Consensus       145 ~~---------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~  191 (268)
                      .+                                 ..++.++|||||||++|||++|+.||........ ..........
T Consensus       221 la~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~  299 (437)
T 4aw2_A          221 SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET-YGKIMNHKER  299 (437)
T ss_dssp             TCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHHHHTHHHH
T ss_pred             hhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH-HHhhhhcccc
Confidence            32                                 2367789999999999999999999975322110 1111110000


Q ss_pred             cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCC--CCChHHHHH
Q 044875          192 DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE--RMDTSDVVN  253 (268)
Q Consensus       192 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~~v~~  253 (268)
                      ..++...                         ......+.+++..|++.+|++  ||+++++++
T Consensus       300 ~~~p~~~-------------------------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          300 FQFPTQV-------------------------TDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             CCCCSSC-------------------------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             ccCCccc-------------------------ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            0000000                         012345777888888888888  999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.93  E-value=6.8e-27  Score=199.85  Aligned_cols=164  Identities=17%  Similarity=0.259  Sum_probs=121.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .+.|...+.||+|+||.||++....+++.+|+|.+.                                            
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~   90 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV   90 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred             hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence            356788889999999999999998899999999432                                            


Q ss_pred             -----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC----ceee-eeccC-
Q 044875           96 -----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM----TTHV-EYGMG-  146 (268)
Q Consensus        96 -----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~----~~~i-e~~~~-  146 (268)
                                             +.....++.+++.||.|||+.+   ++||||||+||+++.+.    ..++ ||+.+ 
T Consensus        91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG~a~  167 (361)
T 2yab_A           91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH  167 (361)
T ss_dssp             EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence                                   1345789999999999999988   99999999999998765    3444 44432 


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                               ..++.++||||+|+++||+++|..||......  ............     +++.
T Consensus       168 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~--~~~~~i~~~~~~-----~~~~  240 (361)
T 2yab_A          168 EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ--ETLANITAVSYD-----FDEE  240 (361)
T ss_dssp             ECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHTTCCC-----CCHH
T ss_pred             EcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCC-----CCch
Confidence                                     35778999999999999999999999753221  111111111000     0000


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..                    ......+.+++..||+.||++|||+.++++
T Consensus       241 ~~--------------------~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          241 FF--------------------SQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HH--------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hc--------------------cCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00                    022345778999999999999999999984

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.93  E-value=5.6e-27  Score=194.43  Aligned_cols=162  Identities=22%  Similarity=0.355  Sum_probs=118.1

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |.....||+|+||.||+|....++..||+|.+..                                              
T Consensus        28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv  107 (290)
T 1t4h_A           28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV  107 (290)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence            4455679999999999999988999999993321                                              


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC-CCCceee-eeccC-------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-NDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~-~~~~~~i-e~~~~-------  146 (268)
                                           .....++.+++.||.|||+.+ .+++|+||||+||+++ .+...++ +|+.+       
T Consensus       108 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~  186 (290)
T 1t4h_A          108 TELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF  186 (290)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS
T ss_pred             EEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc
Confidence                                 345678999999999999865 4599999999999997 6666666 34322       


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++||||+|++++|+++|+.||..................+.....             
T Consensus       187 ~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------  253 (290)
T 1t4h_A          187 AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDK-------------  253 (290)
T ss_dssp             BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGG-------------
T ss_pred             cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCC-------------
Confidence                             24678999999999999999999999753222111111111101101000             


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ..+..+.+++..||+.||++|||+.++++
T Consensus       254 ---------------~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          254 ---------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             ---------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ---------------CCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence                           12245788999999999999999999985

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.93  E-value=4.4e-27  Score=198.46  Aligned_cols=163  Identities=18%  Similarity=0.276  Sum_probs=120.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||.||++....++..+|+|.+.                                             
T Consensus        11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~   90 (326)
T 2y0a_A           11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   90 (326)
T ss_dssp             HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence            45777789999999999999998889999999432                                             


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC----ceee-eeccC--
Q 044875           96 ----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM----TTHV-EYGMG--  146 (268)
Q Consensus        96 ----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~----~~~i-e~~~~--  146 (268)
                                            +.....++.+++.||.|||+.+   ++||||||+||+++.+.    ..++ ||+.+  
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~  167 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  167 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEECCCCeE
Confidence                                  1345789999999999999988   99999999999998766    4454 44422  


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++||||+|++++|+++|..||....... .+..... .....     ....
T Consensus       168 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~-~~~~~-----~~~~  240 (326)
T 2y0a_A          168 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSA-VNYEF-----EDEY  240 (326)
T ss_dssp             CCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHH-TCCCC-----CHHH
T ss_pred             CCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHh-cCCCc-----Cccc
Confidence                                    356788999999999999999999997532211 0111111 00000     0000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                          ....+..+.+++..||+.||++|||+.++++
T Consensus       241 --------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          241 --------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             --------------------HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             --------------------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                                0022345788999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.93  E-value=4.6e-27  Score=193.71  Aligned_cols=159  Identities=21%  Similarity=0.341  Sum_probs=117.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|+...+++.||+|.+.                                             
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL   90 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc---------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM---------  145 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~---------  145 (268)
                                          +.....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+.         
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~  167 (278)
T 3cok_A           91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE  167 (278)
T ss_dssp             ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred             ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence                                1345778999999999999988   999999999999998887776 3332         


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        +..++.++||||+|++++|+++|+.||........     .......      +...    +
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-----~~~~~~~------~~~~----~  232 (278)
T 3cok_A          168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-----LNKVVLA------DYEM----P  232 (278)
T ss_dssp             ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CCSS------CCCC----C
T ss_pred             cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-----HHHHhhc------ccCC----c
Confidence                              23456799999999999999999999975322110     0000000      0000    0


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ......+.+++..||+.||++|||+.++++
T Consensus       233 ----------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          233 ----------------SFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             ----------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ----------------cccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence                            022345788999999999999999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.93  E-value=1.2e-26  Score=198.47  Aligned_cols=164  Identities=18%  Similarity=0.249  Sum_probs=119.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....+++.||+|.+..                                           
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   98 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA   98 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence            3678888999999999999999998999999994321                                           


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc--eee-eeccC----------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--THV-EYGMG----------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~--~~i-e~~~~----------  146 (268)
                                       .....++.+++.||.|||+.+   ++||||||+||+++.+..  .++ +|+.+          
T Consensus        99 ~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~  175 (361)
T 3uc3_A           99 SGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPK  175 (361)
T ss_dssp             CSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC----------
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCC
Confidence                             456788999999999999988   999999999999987665  444 55533          


Q ss_pred             ----------------CCcCcc-ccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhcchhhhcCCC
Q 044875          147 ----------------NQFSTN-GDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ----------------~~~~~~-~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~  207 (268)
                                      ..++.+ +||||+|+++||+++|+.||........ ...........  ..+.          .
T Consensus       176 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~----------~  244 (361)
T 3uc3_A          176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVKYSIPD----------D  244 (361)
T ss_dssp             -----CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTCCCCCT----------T
T ss_pred             CCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCCCCCCC----------c
Confidence                            223334 8999999999999999999975432211 11111110000  0000          0


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ......+.+++..||+.||++|||+.++++
T Consensus       245 ----------------~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          245 ----------------IRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             ----------------SCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             ----------------CCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence                            012345788999999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.93  E-value=1.6e-26  Score=193.83  Aligned_cols=178  Identities=19%  Similarity=0.286  Sum_probs=119.1

Q ss_pred             CCCCc-CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           61 GGFSS-ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~-~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      +.|.. .+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e   91 (316)
T 2ac3_A           12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE   91 (316)
T ss_dssp             TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence            34554 3679999999999999988899999994421                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eeccC-------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYGMG-------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~~~-------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+..   .++ +|+.+       
T Consensus        92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~  168 (316)
T 2ac3_A           92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG  168 (316)
T ss_dssp             CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred             cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence                               345678999999999999988   999999999999987654   444 44432       


Q ss_pred             --------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch
Q 044875          147 --------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI  194 (268)
Q Consensus       147 --------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  194 (268)
                                                      ..++.++||||+|+++||+++|+.||.............  ...+...
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~~~~  246 (316)
T 2ac3_A          169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRG--EACPACQ  246 (316)
T ss_dssp             -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC------CCHHHH
T ss_pred             ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccc--ccchhHH
Confidence                                            125678999999999999999999997543221110000  0000000


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .................          ........+.+++..||+.||++|||+.++++
T Consensus       247 ~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          247 NMLFESIQEGKYEFPDK----------DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHHHHHHCCCCCCHH----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHhccCcccCch----------hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            00000000000000000          00023456889999999999999999999986

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.93  E-value=9.7e-27  Score=193.77  Aligned_cols=161  Identities=22%  Similarity=0.318  Sum_probs=118.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------c-----------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------P-----------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------~-----------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                 .           
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            67888899999999999999998899999999641                                 0           


Q ss_pred             --------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccc
Q 044875           97 --------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNIL  132 (268)
Q Consensus        97 --------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nil  132 (268)
                                                                  .....++.+++.||.|||+.+   ++||||||+||+
T Consensus        93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil  169 (298)
T 2zv2_A           93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPSNLL  169 (298)
T ss_dssp             CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEE
T ss_pred             CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEE
Confidence                                                        235678999999999999988   999999999999


Q ss_pred             cCCCCceee-eeccC---------------------------CC---cCccccEeechHHHHHHHhCCCCCCcccccccc
Q 044875          133 LDNDMTTHV-EYGMG---------------------------NQ---FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG  181 (268)
Q Consensus       133 l~~~~~~~i-e~~~~---------------------------~~---~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~  181 (268)
                      ++.++..++ ||+.+                           ..   ++.++||||||+++||+++|+.||......  .
T Consensus       170 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~  247 (298)
T 2zv2_A          170 VGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM--C  247 (298)
T ss_dssp             ECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHH--H
T ss_pred             ECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHH--H
Confidence            998887777 44432                           11   256789999999999999999999753211  1


Q ss_pred             hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       182 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +.......... .+.          .                ...+..+.+++..||+.||++|||+.++++
T Consensus       248 ~~~~~~~~~~~-~~~----------~----------------~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          248 LHSKIKSQALE-FPD----------Q----------------PDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHCCCC-CCS----------S----------------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHhcccCC-CCC----------c----------------cccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            11111100000 000          0                022345888999999999999999999874

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.93  E-value=8.9e-27  Score=201.18  Aligned_cols=111  Identities=26%  Similarity=0.435  Sum_probs=96.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+..                                            
T Consensus        52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV  131 (396)
T 4dc2_A           52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV  131 (396)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEE
Confidence            578888999999999999999998999999994321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+        
T Consensus       132 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~  208 (396)
T 4dc2_A          132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  208 (396)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeecccCCC
Confidence                                 345678899999999999998   999999999999999888877 55432        


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                         ..++.++|+||+|+++|||++|+.||..
T Consensus       209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence                               3467899999999999999999999964

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.93  E-value=5e-27  Score=194.41  Aligned_cols=162  Identities=19%  Similarity=0.290  Sum_probs=117.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~  101 (285)
T 3is5_A           22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET  101 (285)
T ss_dssp             HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred             hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence            457777899999999999999988899999993321                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eeccC----
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGMG----  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~~----  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.   +...++ ||+.+    
T Consensus       102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence                                  345678999999999999988   999999999999953   344555 55433    


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..++.++||||+|++++|+++|+.||.......  .........+..         ...
T Consensus       179 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~~~---------~~~  247 (285)
T 3is5_A          179 SDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYKEPNY---------AVE  247 (285)
T ss_dssp             --------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCC---------CC-
T ss_pred             CcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccCCccc---------ccc
Confidence                                 235678999999999999999999997532211  111111111000         000


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..                 .....+.+++..||+.||++|||+.++++
T Consensus       248 ~~-----------------~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          248 CR-----------------PLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             -C-----------------CCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cC-----------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            00                 12345778999999999999999999974

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.93  E-value=5.8e-27  Score=202.34  Aligned_cols=112  Identities=28%  Similarity=0.391  Sum_probs=95.2

Q ss_pred             CCCCcCCcccCC--CcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           61 GGFSSANIIGAG--SFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G--~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ++|...+.||+|  +||.||+|....+++.||+|.+..                                          
T Consensus        25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv  104 (389)
T 3gni_B           25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVV  104 (389)
T ss_dssp             GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEE
Confidence            567788899999  999999999998999999994421                                          


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------  145 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------  145 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.       
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~  181 (389)
T 3gni_B          105 TSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMISH  181 (389)
T ss_dssp             EECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred             EEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence                                   345678899999999999988   999999999999998877766 3321       


Q ss_pred             ---------------------------C--CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          146 ---------------------------G--NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       146 ---------------------------~--~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                                 .  ..++.++||||+||++||+++|+.||.+.
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  240 (389)
T 3gni_B          182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM  240 (389)
T ss_dssp             TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence                                       1  35788999999999999999999999754

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.93  E-value=4.8e-27  Score=198.15  Aligned_cols=169  Identities=24%  Similarity=0.411  Sum_probs=126.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEE--EEeecCc------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVV--SVRDFKP------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~v--avK~l~~------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+  |+|.+..                                          
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            56777889999999999999997777755  8883221                                          


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence                                                 223578899999999999988   9999999999999988777


Q ss_pred             ee-eeccC--------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCc
Q 044875          140 HV-EYGMG--------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVP  191 (268)
Q Consensus       140 ~i-e~~~~--------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~  191 (268)
                      ++ +|+..                          ..++.++||||+|++++|+++ |+.||......  .+.........
T Consensus       182 kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~--~~~~~~~~~~~  259 (327)
T 1fvr_A          182 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGYR  259 (327)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHGGGTCC
T ss_pred             EEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH--HHHHHhhcCCC
Confidence            66 44422                          235788999999999999998 99999753221  11111111100


Q ss_pred             cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          192 DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       192 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                      ..            ..                ...+..+.+++..||+.||++|||+.++++.|+.+.+..
T Consensus       260 ~~------------~~----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          260 LE------------KP----------------LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             CC------------CC----------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             CC------------CC----------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            00            00                023455888999999999999999999999999987653

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.93  E-value=1.8e-26  Score=201.18  Aligned_cols=167  Identities=22%  Similarity=0.331  Sum_probs=123.2

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||+|....+++.||+|.+..                                         
T Consensus       132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~  211 (419)
T 3i6u_A          132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA  211 (419)
T ss_dssp             HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred             hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            345788888999999999999999998999999994321                                         


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eecc
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGM  145 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~  145 (268)
                                                 .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ ||+.
T Consensus       212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~DFG~  288 (419)
T 3i6u_A          212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGH  288 (419)
T ss_dssp             SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred             CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEeeccc
Confidence                                       345678999999999999988   99999999999997543   3555 4442


Q ss_pred             C-----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          146 G-----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       146 ~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                      +                             ..++.++||||||+++||+++|..||...... ..+.............+
T Consensus       289 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~-~~~~~~i~~~~~~~~~~  367 (419)
T 3i6u_A          289 SKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITSGKYNFIPE  367 (419)
T ss_dssp             TTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS-CCHHHHHHTTCCCCCHH
T ss_pred             ceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch-HHHHHHHhcCCCCCCch
Confidence            2                             34567899999999999999999999753222 12222222211111111


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..                         ...+..+.+++..||+.||++|||++++++
T Consensus       368 ~~-------------------------~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          368 VW-------------------------AEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HH-------------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hh-------------------------cccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            00                         023456888999999999999999999985

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.93  E-value=6.3e-27  Score=195.28  Aligned_cols=161  Identities=23%  Similarity=0.412  Sum_probs=122.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~  101 (303)
T 3a7i_A           22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY  101 (303)
T ss_dssp             GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence            457778899999999999999988899999994421                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.             
T Consensus       102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  178 (303)
T 3a7i_A          102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  178 (303)
T ss_dssp             CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCC
T ss_pred             CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccccccCc
Confidence                             345789999999999999988   999999999999998887776 3332             


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    ...++.++||||||++++|+++|+.||.......  .........+...        ..       
T Consensus       179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~--------~~-------  241 (303)
T 3a7i_A          179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMK--VLFLIPKNNPPTL--------EG-------  241 (303)
T ss_dssp             CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCC--------CS-------
T ss_pred             cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHH--HHHHhhcCCCCCC--------cc-------
Confidence                          2346788999999999999999999997532211  1111111111000        00       


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNN  254 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~  254 (268)
                                   ..+..+.+++..||+.||++|||+.++++.
T Consensus       242 -------------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          242 -------------NYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             -------------SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             -------------ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence                         223458889999999999999999999863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.93  E-value=2.8e-27  Score=195.33  Aligned_cols=165  Identities=21%  Similarity=0.352  Sum_probs=124.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS   90 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence            457778899999999999999988899999992211                                            


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+
T Consensus        91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg  167 (284)
T 2a19_B           91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFG  167 (284)
T ss_dssp             EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCT
T ss_pred             CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCCCEEECcch
Confidence                                           234678899999999999988   999999999999998877776 443


Q ss_pred             c--------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhc
Q 044875          145 M--------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVL  198 (268)
Q Consensus       145 ~--------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (268)
                      .                          +..++.++||||||++++|+++|..|+.....    .......   ..+..  
T Consensus       168 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~----~~~~~~~---~~~~~--  238 (284)
T 2a19_B          168 LVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSK----FFTDLRD---GIISD--  238 (284)
T ss_dssp             TCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHH----HHHHHHT---TCCCT--
T ss_pred             hheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHH----HHHHhhc---ccccc--
Confidence            2                          23467889999999999999999988753110    0000000   00000  


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                                .....+.+++..||+.||++|||+.++++.|+.+.+...
T Consensus       239 --------------------------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          239 --------------------------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             --------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             --------------------------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence                                      123346788999999999999999999999998876543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=2.7e-27  Score=201.19  Aligned_cols=161  Identities=24%  Similarity=0.385  Sum_probs=121.8

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC------------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK------------------------------------------   95 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~------------------------------------------   95 (268)
                      ...++|...+.||+|+||.||+|+...+++.||+|.+.                                          
T Consensus        14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~   93 (345)
T 1xjd_A           14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL   93 (345)
T ss_dssp             --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence            34578888999999999999999998899999999432                                          


Q ss_pred             -----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           96 -----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        96 -----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                             +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+     
T Consensus        94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A           94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence                                   1345678899999999999988   999999999999999887777 44432     


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                            ..++.++|+||+|+++||+++|+.||......  .+........+ ..+.        
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-~~p~--------  239 (345)
T 1xjd_A          171 GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDNP-FYPR--------  239 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT--------
T ss_pred             CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhCCC-CCCc--------
Confidence                                  34678899999999999999999999753221  11111111110 0000        


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH-HHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS-DVV  252 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-~v~  252 (268)
                                          .....+.+++..||+.||++||++. ++.
T Consensus       240 --------------------~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          240 --------------------WLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             --------------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             --------------------ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                                1234578899999999999999997 664

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.93  E-value=5.4e-27  Score=206.08  Aligned_cols=160  Identities=21%  Similarity=0.335  Sum_probs=122.5

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....+++.||+|.+..                                           
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            3568888899999999999999988999999994321                                           


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                           .....++.+++.||.|||+ .+   ++||||||+|||++.++..++ |||.+       
T Consensus       227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  303 (446)
T 4ejn_A          227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG  303 (446)
T ss_dssp             ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--
T ss_pred             EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccCCC
Confidence                                 3456788999999999998 77   999999999999999888877 55532       


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++||||||++++|+++|+.||......  .+......... .++.          
T Consensus       304 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-~~p~----------  370 (446)
T 4ejn_A          304 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--KLFELILMEEI-RFPR----------  370 (446)
T ss_dssp             ---CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT----------
T ss_pred             cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHHhCCC-CCCc----------
Confidence                                34678999999999999999999999753221  11111111000 0000          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                        .....+.+++..||+.||.+||     +++++++
T Consensus       371 ------------------~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          371 ------------------TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             ------------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ------------------cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                              2234578899999999999999     9999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=5e-27  Score=198.03  Aligned_cols=165  Identities=26%  Similarity=0.394  Sum_probs=119.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e  101 (327)
T 3aln_A           22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME  101 (327)
T ss_dssp             CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence            677778999999999999999988899999994321                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                             .....++.+++.||.|||+. +   ++||||||+||+++.++..++ +|+.      
T Consensus       102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  178 (327)
T 3aln_A          102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLVD  178 (327)
T ss_dssp             CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred             ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence                                   23457889999999999997 8   999999999999998887777 3332      


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              ...++.++||||||+++||+++|+.||.........+...... .+..        
T Consensus       179 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~--------  249 (327)
T 3aln_A          179 SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKG-DPPQ--------  249 (327)
T ss_dssp             ---------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCS-CCCC--------
T ss_pred             ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcC-CCCC--------
Confidence                                    2336789999999999999999999997532211111110000 0000        


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +.....                ......+.+++..||+.||++|||+.++++
T Consensus       250 ~~~~~~----------------~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          250 LSNSEE----------------REFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCCSS----------------CCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCCccc----------------ccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            000000                023456889999999999999999999985

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.93  E-value=1e-26  Score=193.75  Aligned_cols=163  Identities=18%  Similarity=0.321  Sum_probs=122.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .+.|...+.||+|+||.||+|....++..+|+|.+..                                           
T Consensus        18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   97 (302)
T 2j7t_A           18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF   97 (302)
T ss_dssp             GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred             ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence            3667788899999999999999988899999994322                                           


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+.           
T Consensus        98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  174 (302)
T 2j7t_A           98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKR  174 (302)
T ss_dssp             CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-
T ss_pred             CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccccccc
Confidence                               345678999999999999988   999999999999998887777 3331           


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ...++.++||||||++++|+++|..||........ .........+.    ...     
T Consensus       175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~----~~~-----  244 (302)
T 2j7t_A          175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRV-LLKIAKSDPPT----LLT-----  244 (302)
T ss_dssp             ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCC----CSS-----
T ss_pred             ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHH-HHHHhccCCcc----cCC-----
Confidence                                 34567899999999999999999999975322111 11111110000    000     


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        +...+..+.+++..||+.||++|||+.++++
T Consensus       245 ------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          245 ------------------PSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             ------------------GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             ------------------ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence                              0123445788999999999999999999974

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.93  E-value=5e-27  Score=200.91  Aligned_cols=164  Identities=16%  Similarity=0.291  Sum_probs=121.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.+|+|.+..                                           
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            4568888999999999999999988899999994321                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eeccC------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGMG------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~~------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ ||+.+      
T Consensus       108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~  184 (362)
T 2bdw_A          108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  184 (362)
T ss_dssp             CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence                                345678999999999999988   99999999999998653   2444 44432      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++||||+|+++||+++|..||......  .+...............    .    
T Consensus       185 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~--~~~~~i~~~~~~~~~~~----~----  254 (362)
T 2bdw_A          185 EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKAGAYDYPSPE----W----  254 (362)
T ss_dssp             CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCCTTG----G----
T ss_pred             cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCCCCccc----c----
Confidence                                35788999999999999999999999753211  11111111111000000    0    


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       ...+..+.+++..||+.||++|||+.++++
T Consensus       255 -----------------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          255 -----------------DTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             -----------------GGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----------------cCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                             022345788999999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.4e-26  Score=198.44  Aligned_cols=184  Identities=17%  Similarity=0.343  Sum_probs=119.5

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            3678888899999999999999988999999995421                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+     
T Consensus       104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  180 (367)
T 1cm8_A          104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS  180 (367)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence                                    234568899999999999998   999999999999999888777 44422     


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-chhhhcchh---
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-QISEVLDPL---  201 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d~~---  201 (268)
                                          ..++.++||||+||+++|+++|+.||....... .+....... .+. .....+...   
T Consensus       181 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~~~  259 (367)
T 1cm8_A          181 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAK  259 (367)
T ss_dssp             SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence                                357889999999999999999999997533211 111111111 110 110000000   


Q ss_pred             --hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 --FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        +...... ...    .+ ..........+.+++..|++.||++|||++++++
T Consensus       260 ~~~~~~~~~-~~~----~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          260 NYMKGLPEL-EKK----DF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHHHSCCC-CCC----CG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhCCCC-CCC----CH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence              0000000 000    00 0001123456888999999999999999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.93  E-value=1.4e-26  Score=194.14  Aligned_cols=164  Identities=23%  Similarity=0.371  Sum_probs=117.4

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|....+++.||+|.+..                                          
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~  106 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC  106 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence            34678888999999999999999988899999994321                                          


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+..           
T Consensus       107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~  183 (314)
T 3com_A          107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRN  183 (314)
T ss_dssp             TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBC
T ss_pred             CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccC
Confidence                              345778999999999999988   999999999999998887776 33322           


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++||||||++++|+++|..||........  ........+....   .           
T Consensus       184 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~~~~~~~~---~-----------  247 (314)
T 3com_A          184 TVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA--IFMIPTNPPPTFR---K-----------  247 (314)
T ss_dssp             CCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH--HHHHHHSCCCCCS---S-----------
T ss_pred             ccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH--HHHHhcCCCcccC---C-----------
Confidence                            3467889999999999999999999975322110  0000001000000   0           


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  +......+.+++..||+.||++|||+.++++
T Consensus       248 ------------~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          248 ------------PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             ------------GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             ------------cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence                        0022345788999999999999999999985

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.3e-26  Score=197.11  Aligned_cols=185  Identities=18%  Similarity=0.284  Sum_probs=123.0

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC-----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK-----------------------------------------   95 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-----------------------------------------   95 (268)
                      ....++|...+.||+|+||.||+|....+++.||+|.+.                                         
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   85 (346)
T 1ua2_A            6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS   85 (346)
T ss_dssp             -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred             HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence            334578888899999999999999998889999999443                                         


Q ss_pred             -------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---
Q 044875           96 -------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---  146 (268)
Q Consensus        96 -------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---  146 (268)
                                               +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+   
T Consensus        86 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A           86 NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF  162 (346)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred             ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceec
Confidence                                     1446789999999999999998   999999999999999888777 44422   


Q ss_pred             -------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhhc
Q 044875          147 -------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEVL  198 (268)
Q Consensus       147 -------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~  198 (268)
                                               ..++.++||||+|+++||+++|.+||....... .+..........   ......
T Consensus       163 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  241 (346)
T 1ua2_A          163 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMC  241 (346)
T ss_dssp             TSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTT
T ss_pred             cCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhc
Confidence                                     236778999999999999999999987532211 111111111110   111000


Q ss_pred             ---chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          199 ---DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       199 ---d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         +.........    .+-    ..........+.+++..||+.||++|||+.++++
T Consensus       242 ~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          242 SLPDYVTFKSFPG----IPL----HHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             SSTTCCCCCCCCC----CCH----HHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCcccccccccCC----CCh----HHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence               0000000000    000    0000133466889999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=1e-26  Score=198.04  Aligned_cols=185  Identities=18%  Similarity=0.331  Sum_probs=124.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   89 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV   89 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence            4678888999999999999999988899999995432                                           


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.        
T Consensus        90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~  166 (353)
T 2b9h_A           90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA  166 (353)
T ss_dssp             EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred             EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence                                  345678999999999999988   999999999999998877776 3332        


Q ss_pred             ------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc--
Q 044875          146 ------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD--  192 (268)
Q Consensus       146 ------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--  192 (268)
                                                    ...++.++||||||++++|+++|+.||........ +...... +.+.  
T Consensus       167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~  245 (353)
T 2b9h_A          167 ADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQ-LLLIFGIIGTPHSD  245 (353)
T ss_dssp             -------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCST
T ss_pred             ccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCchh
Confidence                                          13467789999999999999999999975432111 1111111 1110  


Q ss_pred             c-hhhhcchhhh---cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          193 Q-ISEVLDPLFV---AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       193 ~-~~~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      . .....++...   ..........     ...........+.+++..||+.||++|||+.++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          246 NDLRCIESPRAREYIKSLPMYPAAP-----LEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TTTTTCCCHHHHHHHHTSCCCCCCC-----HHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccccchhhHHhhcccCCCCcc-----hhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0 0000000000   0000000000     00001133556789999999999999999999985

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=4.4e-27  Score=198.52  Aligned_cols=176  Identities=19%  Similarity=0.251  Sum_probs=125.3

Q ss_pred             ccccCHHHHHHHhCCCCcC-CcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------
Q 044875           48 LLNISYESLLKATGGFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------   96 (268)
Q Consensus        48 ~~~~~~~~l~~~~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------   96 (268)
                      ...+.+.....-.+.|... +.||+|+||.||+|....+++.||+|.+..                              
T Consensus        15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~   94 (327)
T 3lm5_A           15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL   94 (327)
T ss_dssp             -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred             chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence            3344444444445556555 789999999999999988899999993321                              


Q ss_pred             ------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CC
Q 044875           97 ------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DM  137 (268)
Q Consensus        97 ------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~  137 (268)
                                                          .....++.+++.||.|||+.+   ++||||||+||+++.   +.
T Consensus        95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~  171 (327)
T 3lm5_A           95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLG  171 (327)
T ss_dssp             EEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBC
T ss_pred             EEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCC
Confidence                                                345789999999999999988   999999999999987   45


Q ss_pred             ceee-eecc--------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC
Q 044875          138 TTHV-EYGM--------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV  190 (268)
Q Consensus       138 ~~~i-e~~~--------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~  190 (268)
                      ..++ +|+.                          ...++.++||||+|++++|+++|+.||........ ...... ..
T Consensus       172 ~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~-~~  249 (327)
T 3lm5_A          172 DIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET-YLNISQ-VN  249 (327)
T ss_dssp             CEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHH-TC
T ss_pred             cEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHH-HHHHHh-cc
Confidence            5555 4432                          24567899999999999999999999975322111 001111 00


Q ss_pred             ccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          191 PDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       191 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .....+                         ........+.+++..||+.||++|||++++++
T Consensus       250 ~~~~~~-------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          250 VDYSEE-------------------------TFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             CCCCTT-------------------------TTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccCch-------------------------hhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            000000                         00123455788999999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=3.8e-26  Score=192.96  Aligned_cols=194  Identities=18%  Similarity=0.267  Sum_probs=125.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEe-cCCCeEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL-DPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~-~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.. ..+++.||+|.+..                                           
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~   93 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC   93 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence            5778889999999999999998 55789999994432                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC----------------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----------------  136 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~----------------  136 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+                
T Consensus        94 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~  170 (339)
T 1z57_A           94 IVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERT  170 (339)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----CEEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccccccc
Confidence                                    235678999999999999988   9999999999999873                


Q ss_pred             ---Cceee-eecc------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhh-
Q 044875          137 ---MTTHV-EYGM------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK-  187 (268)
Q Consensus       137 ---~~~~i-e~~~------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~-  187 (268)
                         ...++ +|+.                        +..++.++||||||+++||+++|..||....... ....... 
T Consensus       171 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~  249 (339)
T 1z57_A          171 LINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-HLAMMERI  249 (339)
T ss_dssp             ESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-HHHHHHHH
T ss_pred             ccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH
Confidence               33444 4432                        2457889999999999999999999997543221 1111111 


Q ss_pred             -hhCccchhhhcc-hhh-----hcCCC-ccchhhhHH-----hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH-
Q 044875          188 -MAVPDQISEVLD-PLF-----VAGGE-EEGEKTAEE-----NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN-  253 (268)
Q Consensus       188 -~~~~~~~~~~~d-~~~-----~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~-  253 (268)
                       ...+..+..... ...     ..... .........     .............+.+++..||+.||++|||+.++++ 
T Consensus       250 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h  329 (339)
T 1z57_A          250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH  329 (339)
T ss_dssp             HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence             111111100000 000     00000 000000000     0000011255678999999999999999999999984 


Q ss_pred             -HHHHh
Q 044875          254 -NLQTV  258 (268)
Q Consensus       254 -~L~~l  258 (268)
                       +++.+
T Consensus       330 p~f~~~  335 (339)
T 1z57_A          330 PFFDLL  335 (339)
T ss_dssp             GGGGGG
T ss_pred             HHHHHH
Confidence             44443

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.93  E-value=3e-26  Score=196.20  Aligned_cols=187  Identities=16%  Similarity=0.323  Sum_probs=126.5

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||+|....+++.||+|.+..                                         
T Consensus        24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  103 (364)
T 3qyz_A           24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK  103 (364)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred             cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence            334678888999999999999999988999999995432                                         


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+     
T Consensus       104 ~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             CEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             eEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence                                    345678999999999999988   999999999999999887777 33321     


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhh
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEV  197 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~  197 (268)
                                                ..++.++||||+|++++|+++|+.||....... .+..........   .+...
T Consensus       181 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~  259 (364)
T 3qyz_A          181 DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCI  259 (364)
T ss_dssp             GGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHh
Confidence                                      236788999999999999999999997543221 111111111111   11111


Q ss_pred             cchhh---hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          198 LDPLF---VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       198 ~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .+...   ............     ..........+.+++..||+.||++|||+.++++
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          260 INLKARNYLLSLPHKNKVPW-----NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCHHHHHHHHTSCCCCCCCH-----HHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhHHHHHHhcCCccCCCH-----HHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            00000   000000000000     0000123456789999999999999999999985

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.93  E-value=5.5e-27  Score=196.76  Aligned_cols=163  Identities=22%  Similarity=0.343  Sum_probs=114.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e  104 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAME  104 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEe
Confidence            567777899999999999999988899999994421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         .....++.+++.||.|||+. +   ++|+||||+||+++.++..++ +|+..         
T Consensus       105 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~  181 (318)
T 2dyl_A          105 LMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAK  181 (318)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred             ccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCCccc
Confidence                               34567899999999999985 7   999999999999998887777 44322         


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                            ..++.++||||||+++||+++|+.||.........+...... .+.....        
T Consensus       182 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~--------  252 (318)
T 2dyl_A          182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE-EPPLLPG--------  252 (318)
T ss_dssp             -----CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHS-CCCCCCS--------
T ss_pred             cccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhcc-CCCCCCc--------
Confidence                                  345678999999999999999999997532221111111111 1100000        


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .                  ...+..+.+++..||+.||.+||++.++++
T Consensus       253 ~------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          253 H------------------MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             S------------------SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             c------------------CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            0                  022345788999999999999999999985

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.93  E-value=7.8e-27  Score=203.52  Aligned_cols=183  Identities=21%  Similarity=0.299  Sum_probs=121.9

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      .|...+.||+|+||.||+|....+++.||+|.+..                                             
T Consensus        55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~  134 (420)
T 1j1b_A           55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDY  134 (420)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred             eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhc
Confidence            46777889999999999999988899999993321                                             


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC-------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG-------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~-------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+|||++.+ ...++ |||.+       
T Consensus       135 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~  211 (420)
T 1j1b_A          135 VPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE  211 (420)
T ss_dssp             CCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred             ccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhhhcccCC
Confidence                                 124567889999999999988   9999999999999965 44455 44432       


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhhcchhhh
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEVLDPLFV  203 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~  203 (268)
                                          ..++.++|||||||++||+++|+.||...... ..+..........   .+... ++...
T Consensus       212 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~~~~-~~~~~  289 (420)
T 1j1b_A          212 PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREM-NPNYT  289 (420)
T ss_dssp             CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHHHHH-CSCCC
T ss_pred             CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhh-Chhhh
Confidence                                24788999999999999999999999864321 1222222211111   11110 11000


Q ss_pred             cC-CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AG-GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .. .........    ..........++.+++..||+.||.+||++.++++
T Consensus       290 ~~~~p~~~~~~~----~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          290 EFKFPQIKAHPW----TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             CCCCCCCCCCCH----HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhccCccCCCCH----HHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence            00 000000000    00001123456889999999999999999999984

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.93  E-value=2.1e-27  Score=199.14  Aligned_cols=174  Identities=21%  Similarity=0.347  Sum_probs=122.1

Q ss_pred             cccccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------
Q 044875           47 LLLNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------   96 (268)
Q Consensus        47 ~~~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------   96 (268)
                      ....+.+..+....++|...+.||+|+||.||++... +++.+|+|.+..                              
T Consensus        14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~   92 (313)
T 3cek_A           14 GTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR   92 (313)
T ss_dssp             ------CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred             CCCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence            3444555555555677888899999999999999986 588999994321                              


Q ss_pred             ----------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-
Q 044875           97 ----------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-  141 (268)
Q Consensus        97 ----------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-  141 (268)
                                                        .....++.+++.||.|||+.+   ++||||||+||+++. ...++ 
T Consensus        93 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~  168 (313)
T 3cek_A           93 LYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLI  168 (313)
T ss_dssp             EEEEEECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEEC
T ss_pred             EEEEeecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEe
Confidence                                              345778999999999999988   999999999999965 44444 


Q ss_pred             eeccC----------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccc
Q 044875          142 EYGMG----------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG  181 (268)
Q Consensus       142 e~~~~----------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~  181 (268)
                      +|+..                                        ..++.++||||||++++|+++|+.||.........
T Consensus       169 Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  248 (313)
T 3cek_A          169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISK  248 (313)
T ss_dssp             CCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHH
T ss_pred             eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHH
Confidence            44322                                        24667899999999999999999999753222111


Q ss_pred             hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       182 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      +..            ..++........                .....+.+++..||+.||++|||+.++++
T Consensus       249 ~~~------------~~~~~~~~~~~~----------------~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          249 LHA------------IIDPNHEIEFPD----------------IPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHH------------HHCTTSCCCCCC----------------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHH------------HHhcccccCCcc----------------cchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            111            111111100110                12345788999999999999999999985

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=6.5e-27  Score=197.38  Aligned_cols=162  Identities=19%  Similarity=0.273  Sum_probs=113.6

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .+.||+|+||.||+|....+++.||+|.+..                                                 
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            4789999999999999988899999994322                                                 


Q ss_pred             ----------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eecc-----------------
Q 044875           97 ----------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGM-----------------  145 (268)
Q Consensus        97 ----------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~-----------------  145 (268)
                                .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ ||+.                 
T Consensus        96 ~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t  172 (325)
T 3kn6_A           96 RIKKKKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFT  172 (325)
T ss_dssp             HHHHCSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred             HHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCC
Confidence                      446789999999999999988   99999999999997654   4444 3432                 


Q ss_pred             ----------CCCcCccccEeechHHHHHHHhCCCCCCcccccc--cchhhHhhhhCccchhhhcchhhhcCCCccchhh
Q 044875          146 ----------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG--LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKT  213 (268)
Q Consensus       146 ----------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~  213 (268)
                                ...++.++||||+|++++|+++|+.||.......  ....+........            .......  
T Consensus       173 ~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~------------~~~~~~~--  238 (325)
T 3kn6_A          173 LHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG------------DFSFEGE--  238 (325)
T ss_dssp             -----------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT------------CCCCCSH--
T ss_pred             cCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC------------CCCCCcc--
Confidence                      2346788999999999999999999997533211  1111111111100            0000000  


Q ss_pred             hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          214 AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                              .....+..+.+++..||+.||++|||+++++
T Consensus       239 --------~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          239 --------AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             --------HHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             --------cccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence                    0012345688899999999999999999887

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.93  E-value=3.8e-26  Score=196.04  Aligned_cols=189  Identities=17%  Similarity=0.250  Sum_probs=126.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~  104 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD  104 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence            678888999999999999999988899999994421                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.        
T Consensus       105 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~  181 (371)
T 2xrw_A          105 VYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  181 (371)
T ss_dssp             EEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred             eEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence                                  234568899999999999988   999999999999999887777 4442        


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhcchhh---
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVLDPLF---  202 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~---  202 (268)
                                        +..++.++||||+|++++|+++|+.||....... .+..........  .....+.+..   
T Consensus       182 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~  260 (371)
T 2xrw_A          182 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVRTY  260 (371)
T ss_dssp             --------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC-CCCCCHHHHTTSCHHHHHH
T ss_pred             ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHHHH
Confidence                              2347889999999999999999999997532211 111111110000  0000000000   


Q ss_pred             -hcCCCc---cchhh-hHH--hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 -VAGGEE---EGEKT-AEE--NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 -~~~~~~---~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       ......   ..... .+.  .............+.+++..||+.||++|||++++++
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          261 VENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence             000000   00000 000  0000111234667899999999999999999999985

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=2.4e-26  Score=195.78  Aligned_cols=159  Identities=18%  Similarity=0.236  Sum_probs=121.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+.                                             
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~  120 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.          
T Consensus       121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~  197 (350)
T 1rdq_E          121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCCccc
Confidence                               1345678999999999999988   999999999999998887777 4443          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..++.++|+||+|+++||+++|+.||......  ........... .++.               
T Consensus       198 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~i~~~~~-~~p~---------------  259 (350)
T 1rdq_E          198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEKIVSGKV-RFPS---------------  259 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT---------------
T ss_pred             ccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH--HHHHHHHcCCC-CCCC---------------
Confidence                          245788999999999999999999999753211  11111111100 0000               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                                   .....+.+++..||+.||.+||+     ++++.+
T Consensus       260 -------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          260 -------------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -------------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                         22345788999999999999998     777763

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=6.7e-27  Score=201.59  Aligned_cols=197  Identities=16%  Similarity=0.257  Sum_probs=127.8

Q ss_pred             HHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------
Q 044875           57 LKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        57 ~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------   96 (268)
                      ....++|...+.||+|+||.||+|....+++.||+|.+..                                        
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~   82 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP   82 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred             ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence            4456788889999999999999999988999999993211                                        


Q ss_pred             ----------------------------------------------------------cchhhHHHHHHHHHHHHhhcCC
Q 044875           97 ----------------------------------------------------------CTRLSIAIDVASALEYLHHHSE  118 (268)
Q Consensus        97 ----------------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~  118 (268)
                                                                                .....++.+++.||.|||+.+ 
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g-  161 (383)
T 3eb0_A           83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLG-  161 (383)
T ss_dssp             ---------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT-
T ss_pred             ccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCc-
Confidence                                                                      123457889999999999988 


Q ss_pred             CCeeecCCCCCccccC-CCCceee-eeccC---------------------------CCcCccccEeechHHHHHHHhCC
Q 044875          119 KPIVHCDSKPSNILLD-NDMTTHV-EYGMG---------------------------NQFSTNGDVYSYGKLLLEIFTGK  169 (268)
Q Consensus       119 ~~i~h~dlk~~nill~-~~~~~~i-e~~~~---------------------------~~~~~~~Dv~s~G~vl~el~tg~  169 (268)
                        ++||||||+||+++ .+...++ ||+.+                           ..++.++||||+|++++|+++|+
T Consensus       162 --i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~  239 (383)
T 3eb0_A          162 --ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK  239 (383)
T ss_dssp             --EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred             --CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCC
Confidence              99999999999997 4666666 33322                           23788999999999999999999


Q ss_pred             CCCCcccccccchhhHhhhhCccchhhh--cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC
Q 044875          170 RSTSDMFTEGLGLHNFVKMAVPDQISEV--LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD  247 (268)
Q Consensus       170 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs  247 (268)
                      .||....... .+.........+....+  .++......   .+...........+...+..+.+++..||+.||++|||
T Consensus       240 ~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  315 (383)
T 3eb0_A          240 PLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVR---FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRIN  315 (383)
T ss_dssp             CSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CC---CCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred             CCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCccccccc---CCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            9998643221 12222221111111100  000000000   00000000111111234556889999999999999999


Q ss_pred             hHHHH--HHHHHhHH
Q 044875          248 TSDVV--NNLQTVKS  260 (268)
Q Consensus       248 ~~~v~--~~L~~l~~  260 (268)
                      +.+++  ..++.++.
T Consensus       316 ~~e~l~hp~f~~~~~  330 (383)
T 3eb0_A          316 PYEAMAHPFFDHLRN  330 (383)
T ss_dssp             HHHHHTSGGGHHHHH
T ss_pred             HHHHhcCHHHHHHHh
Confidence            99998  36666554

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.93  E-value=4.3e-26  Score=200.99  Aligned_cols=105  Identities=25%  Similarity=0.548  Sum_probs=81.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~  132 (458)
T 3rp9_A           53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL  132 (458)
T ss_dssp             TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred             CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence            678889999999999999999988999999994321                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+      
T Consensus       133 ~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~  209 (458)
T 3rp9_A          133 YVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYP  209 (458)
T ss_dssp             EEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSC
T ss_pred             EEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchhccCc
Confidence                                   345678999999999999988   999999999999999887777 44422      


Q ss_pred             -------------------------------------------------CCcCccccEeechHHHHHHHhC
Q 044875          147 -------------------------------------------------NQFSTNGDVYSYGKLLLEIFTG  168 (268)
Q Consensus       147 -------------------------------------------------~~~~~~~Dv~s~G~vl~el~tg  168 (268)
                                                                       ..++.++|||||||++|||++|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          210 ENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             TTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence                                                             3367889999999999999994

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=4.5e-27  Score=194.84  Aligned_cols=173  Identities=24%  Similarity=0.382  Sum_probs=118.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC-CC--eEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP-DQ--TVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~-~~--~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+.. ++  ..||+|.+..                                         
T Consensus        18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (291)
T 1u46_A           18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   97 (291)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence            567778899999999999998632 22  3689994431                                         


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..      
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  174 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  174 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEcccccccccccc
Confidence                                   345678899999999999988   999999999999988877766 44422      


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              ..++.++||||||++++|+++ |+.||.......  ........... .       
T Consensus       175 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~~~-~-------  244 (291)
T 1u46_A          175 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ--ILHKIDKEGER-L-------  244 (291)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH--HHHHHHTSCCC-C-------
T ss_pred             ccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHH--HHHHHHccCCC-C-------
Confidence                                    235678999999999999999 999997532211  11111000000 0       


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhhc
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLRC  265 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~~  265 (268)
                         ...                ...+..+.+++..||+.||++|||+.++++.|+++...-.+.
T Consensus       245 ---~~~----------------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  289 (291)
T 1u46_A          245 ---PRP----------------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRA  289 (291)
T ss_dssp             ---CCC----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC------
T ss_pred             ---CCC----------------cCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccchhh
Confidence               000                133456889999999999999999999999999887654443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.93  E-value=3.7e-26  Score=192.36  Aligned_cols=164  Identities=21%  Similarity=0.322  Sum_probs=121.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   89 (322)
T 2ycf_A           10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY   89 (322)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred             hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence            567778899999999999999988899999995421                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eecc---
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYGM---  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~~---  145 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.+..   .++ +|+.   
T Consensus        90 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A           90 YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             EEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             EEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence                                    235678899999999999988   999999999999986543   444 3432   


Q ss_pred             --------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          146 --------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       146 --------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                                                ...++.++||||||+++||+++|..||....... .+.............+.  
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~--  243 (322)
T 2ycf_A          167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKYNFIPEV--  243 (322)
T ss_dssp             CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCCCCCHHH--
T ss_pred             cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCccccCchh--
Confidence                                      2346789999999999999999999997533221 12222211111100000  


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         .                    ...+..+.+++..||+.||++|||+.++++
T Consensus       244 ---~--------------------~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          244 ---W--------------------AEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             ---H--------------------TTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---h--------------------hhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence               0                    023456889999999999999999999984

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.93  E-value=1.7e-26  Score=194.16  Aligned_cols=159  Identities=25%  Similarity=0.309  Sum_probs=120.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+..                                            
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~   85 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   85 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence            567778899999999999999988999999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.          
T Consensus        86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~  162 (318)
T 1fot_A           86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  162 (318)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCCcccc
Confidence                                345678899999999999988   999999999999999888777 4443          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..++.++|+||+|+++||+++|+.||......  ........... .++.               
T Consensus       163 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~-~~p~---------------  224 (318)
T 1fot_A          163 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYEKILNAEL-RFPP---------------  224 (318)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHCCC-CCCT---------------
T ss_pred             ccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC-CCCC---------------
Confidence                          245788999999999999999999999753211  11111110000 0000               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                   ....++.+++..|++.||++||     +++++.+
T Consensus       225 -------------~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          225 -------------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             -------------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                         1234578899999999999999     8888873

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.93  E-value=3.3e-26  Score=196.06  Aligned_cols=166  Identities=19%  Similarity=0.315  Sum_probs=122.9

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||+|....+|+.||||.+..                                         
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  170 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE  170 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence            344668888999999999999999987899999994321                                         


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG  146 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~  146 (268)
                                                   .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ |||..
T Consensus       171 ~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG~~  247 (365)
T 2y7j_A          171 SSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS  247 (365)
T ss_dssp             BSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             eCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecCcc
Confidence                                         345678999999999999988   999999999999998887776 44422


Q ss_pred             --------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch
Q 044875          147 --------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI  194 (268)
Q Consensus       147 --------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  194 (268)
                                                      ..++.++||||||+++||+++|+.||......  ..............
T Consensus       248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~--~~~~~i~~~~~~~~  325 (365)
T 2y7j_A          248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI--LMLRMIMEGQYQFS  325 (365)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCC
T ss_pred             cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHhCCCCCC
Confidence                                            13677899999999999999999999753211  11111111110000


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .    +..                     ...+..+.+++..||+.||++|||+.++++
T Consensus       326 ~----~~~---------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          326 S----PEW---------------------DDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             H----HHH---------------------SSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             C----ccc---------------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            0    000                     022345788999999999999999999985

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.93  E-value=1.2e-26  Score=198.85  Aligned_cols=185  Identities=16%  Similarity=0.323  Sum_probs=120.3

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            3678888999999999999999988999999995421                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+     
T Consensus       108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  184 (367)
T 2fst_X          108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTAD  184 (367)
T ss_dssp             CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---------
T ss_pred             eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence                                    234678899999999999988   999999999999999888777 34322     


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-c-hhhhcchhh-
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-Q-ISEVLDPLF-  202 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~d~~~-  202 (268)
                                          ..++.++||||+||+++|+++|+.||.+..... .+....... .+. . +........ 
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~~~~  263 (367)
T 2fst_X          185 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESAR  263 (367)
T ss_dssp             ------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCCCHHHH
T ss_pred             cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhhhHHHH
Confidence                                357889999999999999999999997543211 111111111 110 0 000000000 


Q ss_pred             --hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 --VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ..............     ........+.+++..||+.||++|||+.++++
T Consensus       264 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          264 NYIQSLTQMPKMNFAN-----VFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHHHTSCCCCCCCHHH-----HTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhccCCCCCCCHHH-----HCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence              00000000000000     00122455788999999999999999999974

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=1.3e-26  Score=200.60  Aligned_cols=184  Identities=19%  Similarity=0.290  Sum_probs=120.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      .+|...+.||+|+||.||+|....++. +|+|.+..                                            
T Consensus        40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e  118 (394)
T 4e7w_A           40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE  118 (394)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred             ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence            357778899999999999999975555 77772211                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC-CCCceee-eeccC------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-NDMTTHV-EYGMG------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~-~~~~~~i-e~~~~------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++ .++..++ |||.+      
T Consensus       119 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          119 YVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             CCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             ccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence                                  224567889999999999988   99999999999998 6776666 44432      


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch--hhhcchhhh
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI--SEVLDPLFV  203 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~  203 (268)
                                           ..++.++||||+||++||+++|+.||.+..... .+............  ....++...
T Consensus       196 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~~~~~  274 (394)
T 4e7w_A          196 EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIKTMNPNYM  274 (394)
T ss_dssp             CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCGGGS
T ss_pred             CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhhChhhh
Confidence                                 247889999999999999999999998643221 12222221111100  000111110


Q ss_pred             c-CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 A-GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      . ..+......    ............+.+++..||+.||++|||+.++++
T Consensus       275 ~~~~~~~~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          275 EHKFPQIRPHP----FSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             SSCCCCCCCCC----HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhccccccCCc----HHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            0 000000000    000111123457889999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=3.8e-26  Score=194.27  Aligned_cols=194  Identities=18%  Similarity=0.271  Sum_probs=124.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCC-eEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQ-TVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~-~~vavK~l~~-------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++ ..||+|.+..                                           
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~   98 (355)
T 2eu9_A           19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC   98 (355)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred             ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence            67888899999999999999986555 7999994432                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC------------------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD------------------  134 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~------------------  134 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++                  
T Consensus        99 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           99 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccccccc
Confidence                                    345678999999999999988   99999999999993                  


Q ss_pred             -CCCceee-eecc------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          135 -NDMTTHV-EYGM------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       135 -~~~~~~i-e~~~------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                       .+...++ +|+.                        +..++.++||||+|+++||+++|+.||....... .+......
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~  254 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE-HLVMMEKI  254 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHH
T ss_pred             cCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHH
Confidence             3444554 4432                        3457889999999999999999999997533221 11111111


Q ss_pred             --hCccchhhhc-chhhhc----CCC--ccchhhhHH-----hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH-
Q 044875          189 --AVPDQISEVL-DPLFVA----GGE--EEGEKTAEE-----NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN-  253 (268)
Q Consensus       189 --~~~~~~~~~~-d~~~~~----~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~-  253 (268)
                        ..+..+.... ......    ...  .........     .............+.+++..||+.||++|||+.++++ 
T Consensus       255 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h  334 (355)
T 2eu9_A          255 LGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLH  334 (355)
T ss_dssp             HCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred             cCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence              1111100000 000000    000  000000000     0000011244567899999999999999999999983 


Q ss_pred             -HHHHh
Q 044875          254 -NLQTV  258 (268)
Q Consensus       254 -~L~~l  258 (268)
                       +++++
T Consensus       335 p~f~~~  340 (355)
T 2eu9_A          335 PFFAGL  340 (355)
T ss_dssp             GGGGGC
T ss_pred             hhhcCC
Confidence             44443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=1.4e-26  Score=199.65  Aligned_cols=163  Identities=18%  Similarity=0.281  Sum_probs=120.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+.                                             
T Consensus        51 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~  130 (387)
T 1kob_A           51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  130 (387)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcC
Confidence            56788889999999999999998889999999332                                             


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC--Cceee-eeccC---------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--MTTHV-EYGMG---------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~--~~~~i-e~~~~---------  146 (268)
                                       +.....++.+++.||.|||+.+   ++||||||+||+++.+  ...++ ||+.+         
T Consensus       131 ~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  207 (387)
T 1kob_A          131 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  207 (387)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecCCCcce
Confidence                             1346788999999999999988   9999999999999743  34554 44432         


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++||||+|+++||+++|..||...... ..+.........      +++..       
T Consensus       208 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~------~~~~~-------  273 (387)
T 1kob_A          208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWE------FDEDA-------  273 (387)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCC------CCSST-------
T ss_pred             eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC------CCccc-------
Confidence                             34678899999999999999999999753211 111111111000      00000       


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   .......+.+++..||+.||++|||+.++++
T Consensus       274 -------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          274 -------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             -------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence                         0022445788999999999999999999985

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.93  E-value=4e-26  Score=195.89  Aligned_cols=184  Identities=18%  Similarity=0.325  Sum_probs=126.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  120 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  120 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence            3678888899999999999999988999999994432                                           


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+      
T Consensus       121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~  197 (371)
T 4exu_A          121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE  197 (371)
T ss_dssp             CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred             eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence                                   335678999999999999988   999999999999999887777 44322      


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-chhhhcchhh---
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-QISEVLDPLF---  202 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d~~~---  202 (268)
                                         ..++.++||||+|++++|+++|+.||....... .+....... .+. .....++...   
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~  276 (371)
T 4exu_A          198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAAKS  276 (371)
T ss_dssp             --CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred             cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence                               457889999999999999999999997532211 111111111 110 1111000000   


Q ss_pred             --hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 --VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ...........      ..........+.+++..||+.||++|||+.++++
T Consensus       277 ~~~~~~~~~~~~~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          277 YIQSLPQTPRKDF------TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHHSCCCCCCCH------HHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhhccCCCcchhH------HHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence              00000000000      0000123566889999999999999999999984

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.93  E-value=1.5e-26  Score=190.57  Aligned_cols=163  Identities=19%  Similarity=0.261  Sum_probs=120.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (277)
T 3f3z_A            9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC   88 (277)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence            567778899999999999999988899999994321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc---CCCCceee-eeccC---------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL---DNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill---~~~~~~~i-e~~~~---------  146 (268)
                                       .....++.+++.|+.|||+.+   ++|+||||+||++   +.+...++ +|+..         
T Consensus        89 ~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~  165 (277)
T 3f3z_A           89 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMM  165 (277)
T ss_dssp             CSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCB
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccch
Confidence                             456789999999999999988   9999999999999   66666665 44432         


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      +.++.++||||+|++++|+++|+.||.......  ................             
T Consensus       166 ~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~-------------  230 (277)
T 3f3z_A          166 RTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSE--VMLKIREGTFTFPEKD-------------  230 (277)
T ss_dssp             CCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCCCCCHHH-------------
T ss_pred             hccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHH--HHHHHHhCCCCCCchh-------------
Confidence                            235789999999999999999999997532211  1111111100000000             


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ....+..+.+++..||+.||++|||+.++++
T Consensus       231 ------------~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          231 ------------WLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             ------------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ------------hhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                        0022456788999999999999999999984

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.93  E-value=9.5e-27  Score=191.84  Aligned_cols=165  Identities=19%  Similarity=0.279  Sum_probs=121.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv   85 (279)
T 2w5a_A            6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   85 (279)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred             hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             ------------------------ccchhhHHHHHHHHHHHHhhcC--CCCeeecCCCCCccccCCCCceee-eecc---
Q 044875           96 ------------------------PCTRLSIAIDVASALEYLHHHS--EKPIVHCDSKPSNILLDNDMTTHV-EYGM---  145 (268)
Q Consensus        96 ------------------------~~~~~~i~~~v~~~l~yLh~~~--~~~i~h~dlk~~nill~~~~~~~i-e~~~---  145 (268)
                                              +.....++.+++.||.|||+.+  ..+++|+||||+||+++.++..++ +|+.   
T Consensus        86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~  165 (279)
T 2w5a_A           86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  165 (279)
T ss_dssp             EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHH
T ss_pred             EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhee
Confidence                                    2345788999999999999865  234999999999999998887777 3332   


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              +..++.++||||||+++||+++|+.||......  .+...........+.      
T Consensus       166 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~~~~~------  237 (279)
T 2w5a_A          166 LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKFRRIP------  237 (279)
T ss_dssp             C---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCCC------
T ss_pred             eccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHH--HHHHHHhhcccccCC------
Confidence                                    234678899999999999999999999753221  111111111110000      


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNL  255 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L  255 (268)
                                            ...+..+.+++..||+.||++|||+.++++.+
T Consensus       238 ----------------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          238 ----------------------YRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             ----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             ----------------------cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence                                  02345688899999999999999999998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.93  E-value=9.9e-27  Score=198.28  Aligned_cols=155  Identities=21%  Similarity=0.303  Sum_probs=118.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||+++...+++.+|+|.+.                                            
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l   98 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   98 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence            367888899999999999999998889999999432                                            


Q ss_pred             ---------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           96 ---------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        96 ---------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                           +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+       
T Consensus        99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence                                 1345678999999999999988   999999999999999888777 45432       


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++|+||+|+++||+++|+.||......  .+......... .++           
T Consensus       176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~~~-~~p-----------  241 (353)
T 2i0e_A          176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEHNV-AYP-----------  241 (353)
T ss_dssp             CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCC-----------
T ss_pred             cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH--HHHHHHHhCCC-CCC-----------
Confidence                                34678899999999999999999999753221  11111111000 000           


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                       .....++.+++..||+.||++||++
T Consensus       242 -----------------~~~s~~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          242 -----------------KSMSKEAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             -----------------TTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred             -----------------CCCCHHHHHHHHHHhhcCHHHcCCC
Confidence                             0223457889999999999999964

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=1.4e-26  Score=192.82  Aligned_cols=170  Identities=22%  Similarity=0.390  Sum_probs=116.8

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|....+++.||+|.+..                                          
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (303)
T 2vwi_A           13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM   92 (303)
T ss_dssp             CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred             chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence            34788888999999999999999887899999994321                                          


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                                  .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.. 
T Consensus        93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  169 (303)
T 2vwi_A           93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA  169 (303)
T ss_dssp             ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred             hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence                                        234678899999999999988   999999999999998887777 33311 


Q ss_pred             --------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch
Q 044875          147 --------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI  194 (268)
Q Consensus       147 --------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~  194 (268)
                                                      ..++.++||||||++++|+++|+.||........ . .......+...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~~~  247 (303)
T 2vwi_A          170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-L-MLTLQNDPPSL  247 (303)
T ss_dssp             HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H-HHHHTSSCCCT
T ss_pred             eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-H-HHHhccCCCcc
Confidence                                            2367899999999999999999999975432211 1 11111111111


Q ss_pred             hhh-cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEV-LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ... .++...                    ...+..+.+++..||+.||++|||+.++++
T Consensus       248 ~~~~~~~~~~--------------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          248 ETGVQDKEML--------------------KKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             TC-----CCC--------------------CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             ccccccchhh--------------------hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            100 000000                    022345788999999999999999999985

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.93  E-value=4e-26  Score=201.49  Aligned_cols=159  Identities=22%  Similarity=0.370  Sum_probs=121.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+         
T Consensus        96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~  172 (476)
T 2y94_A           96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  172 (476)
T ss_dssp             ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCB
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccccc
Confidence                               1346789999999999999988   999999999999999888777 44432         


Q ss_pred             -----------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       ..+ +.++||||+|+++||+++|+.||.+....  .+.......... .+             
T Consensus       173 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~--~~~~~i~~~~~~-~p-------------  236 (476)
T 2y94_A          173 RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP--TLFKKICDGIFY-TP-------------  236 (476)
T ss_dssp             CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH--HHHHHHHTTCCC-CC-------------
T ss_pred             cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcCCcC-CC-------------
Confidence                             122 57899999999999999999999753211  111111111000 00             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ......+.+++..||+.||++|||+.++++
T Consensus       237 ---------------~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          237 ---------------QYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             ---------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ---------------ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                           012345788999999999999999999985

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=2.2e-26  Score=195.64  Aligned_cols=111  Identities=25%  Similarity=0.429  Sum_probs=95.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+..                                            
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            567778899999999999999988999999994321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+.+        
T Consensus        89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~  165 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD  165 (345)
T ss_dssp             ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence                                 345678899999999999988   999999999999999888777 44432        


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCc
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSD  174 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~  174 (268)
                                         ..++.++|+||+|+++||+++|+.||..
T Consensus       166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence                               3467889999999999999999999964

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=4.7e-27  Score=197.95  Aligned_cols=173  Identities=20%  Similarity=0.355  Sum_probs=126.0

Q ss_pred             cccCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------
Q 044875           49 LNISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------   96 (268)
Q Consensus        49 ~~~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------   96 (268)
                      ..+++.++....++|...+.||+|+||.||+|....+++.||+|.+..                                
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   91 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI   91 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence            344555666677889999999999999999999988899999993321                                


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           .....++.+++.||.|||+.+   ++|+||||+||+++.++..
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~  168 (326)
T 2x7f_A           92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEV  168 (326)
T ss_dssp             ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCE
T ss_pred             eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCE
Confidence                                                 234668899999999999988   9999999999999988877


Q ss_pred             ee-eecc--------------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHh
Q 044875          140 HV-EYGM--------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFV  186 (268)
Q Consensus       140 ~i-e~~~--------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~  186 (268)
                      ++ +|+.                                ...++.++||||||+++||+++|..||........ .....
T Consensus       169 kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~  247 (326)
T 2x7f_A          169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIP  247 (326)
T ss_dssp             EECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHH
T ss_pred             EEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhh
Confidence            76 3332                                23467789999999999999999999975322110 00000


Q ss_pred             hhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          187 KMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       187 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....+.         ...                   ...+..+.+++..||+.||++||++.++++
T Consensus       248 ~~~~~~---------~~~-------------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          248 RNPAPR---------LKS-------------------KKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HSCCCC---------CSC-------------------SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             cCcccc---------CCc-------------------cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            000000         000                   022345788999999999999999999985

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.93  E-value=1.8e-26  Score=190.81  Aligned_cols=159  Identities=18%  Similarity=0.266  Sum_probs=121.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....++..+|+|.+.                                             
T Consensus        14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   93 (284)
T 2vgo_A           14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML   93 (284)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                         +.....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+.          
T Consensus        94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  170 (284)
T 2vgo_A           94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR  170 (284)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBC
T ss_pred             EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCcccccc
Confidence                               1345678999999999999988   999999999999998887776 4442          


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                     +..++.++||||+|++++|+++|..||.......  .......... ..+               
T Consensus       171 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~-~~~---------------  232 (284)
T 2vgo_A          171 TMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE--THRRIVNVDL-KFP---------------  232 (284)
T ss_dssp             CCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHTTCC-CCC---------------
T ss_pred             cccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH--HHHHHhcccc-CCC---------------
Confidence                           2346789999999999999999999997532111  0000000000 000               


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ......+.+++..||+.||++|||+.++++
T Consensus       233 -------------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          233 -------------PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             -------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -------------CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                         022345788999999999999999999985

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=2.4e-26  Score=195.16  Aligned_cols=173  Identities=20%  Similarity=0.310  Sum_probs=124.6

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      ++....++|...+.||+|+||.||+|....++..+|+|.+..                                      
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            345566778888999999999999999988999999994321                                      


Q ss_pred             --------------------------------------------------------------------cchhhHHHHHHH
Q 044875           97 --------------------------------------------------------------------CTRLSIAIDVAS  108 (268)
Q Consensus        97 --------------------------------------------------------------------~~~~~i~~~v~~  108 (268)
                                                                                          .....++.+++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence                                                                                012348899999


Q ss_pred             HHHHHhhcCCCCeeecCCCCCccccCCCC--ceee-eeccC---------------------------------CCcCcc
Q 044875          109 ALEYLHHHSEKPIVHCDSKPSNILLDNDM--TTHV-EYGMG---------------------------------NQFSTN  152 (268)
Q Consensus       109 ~l~yLh~~~~~~i~h~dlk~~nill~~~~--~~~i-e~~~~---------------------------------~~~~~~  152 (268)
                      ||.|||+.+   ++||||||+||+++.+.  ..++ ||+.+                                 ..++.+
T Consensus       180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            999999988   99999999999998665  4554 44321                                 346779


Q ss_pred             ccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHH
Q 044875          153 GDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILK  232 (268)
Q Consensus       153 ~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
                      +||||||+++||+++|+.||....... .............     .+.                     .......+.+
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~-----~~~---------------------~~~~~~~~~~  309 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDAD-TISQVLNKKLCFE-----NPN---------------------YNVLSPLARD  309 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHCCCCTT-----SGG---------------------GGGSCHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcccccC-----Ccc---------------------cccCCHHHHH
Confidence            999999999999999999997533221 1111111110000     000                     0022445788


Q ss_pred             HHHHcCCCCCCCCCChHHHHH--HHHH
Q 044875          233 IRVVCSIKSPQERMDTSDVVN--NLQT  257 (268)
Q Consensus       233 l~~~C~~~~p~~RPs~~~v~~--~L~~  257 (268)
                      ++..||+.||.+||++.++++  +++.
T Consensus       310 li~~~l~~~p~~Rps~~~~l~hp~~~~  336 (345)
T 3hko_A          310 LLSNLLNRNVDERFDAMRALQHPWISQ  336 (345)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHHSHHHHT
T ss_pred             HHHHHcCCChhHCCCHHHHhcChhhcc
Confidence            999999999999999999985  4443

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.93  E-value=1.2e-26  Score=196.62  Aligned_cols=166  Identities=17%  Similarity=0.326  Sum_probs=115.5

Q ss_pred             hCCCCcC-CcccCCCcceEEEEEecCCCeEEEEeecC-------------------------------------------
Q 044875           60 TGGFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDFK-------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l~-------------------------------------------   95 (268)
                      .++|... +.||+|+||.||+|....+++.||+|.+.                                           
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e  106 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME  106 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence            3667763 46999999999999998889999999332                                           


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eeccC-----
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGMG-----  146 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~~-----  146 (268)
                                          +.....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ +|+..     
T Consensus       107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~  183 (336)
T 3fhr_A          107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ  183 (336)
T ss_dssp             CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence                                1345789999999999999988   99999999999997633   3444 44432     


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccch--hhHhhhhCccchhhhcchhhhc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL--HNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                          ..++.++||||||+++||+++|..||..........  .........    ....+.   
T Consensus       184 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~---  256 (336)
T 3fhr_A          184 NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY----GFPNPE---  256 (336)
T ss_dssp             --------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCCTTT---
T ss_pred             cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccc----ccCchh---
Confidence                                335678999999999999999999997543221100  000000000    000000   


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        ....+..+.+++..||+.||++|||+.++++
T Consensus       257 ------------------~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          257 ------------------WSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ------------------STTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ------------------hccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                              0023455788999999999999999999986

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.93  E-value=2.2e-26  Score=193.70  Aligned_cols=163  Identities=18%  Similarity=0.277  Sum_probs=120.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus        12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (321)
T 2a2a_A           12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV   91 (321)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence            457778899999999999999988899999994321                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC----ceee-eeccC--
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM----TTHV-EYGMG--  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~----~~~i-e~~~~--  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+||+++.+.    ..++ +|+..  
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~  168 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE  168 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence                                   345788999999999999988   99999999999998776    4444 44422  


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++||||+|++++|+++|..||....... .+... ......     .++..
T Consensus       169 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i-~~~~~~-----~~~~~  241 (321)
T 2a2a_A          169 IEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANI-TSVSYD-----FDEEF  241 (321)
T ss_dssp             CCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHH-HTTCCC-----CCHHH
T ss_pred             cCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHH-HHHHH-Hhcccc-----cChhh
Confidence                                    356789999999999999999999997532211 01111 100000     00100


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .                    ...+..+.+++..||+.||++|||+.++++
T Consensus       242 ~--------------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          242 F--------------------SHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             H--------------------TTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             h--------------------cccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            0                    022345788999999999999999999985

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.93  E-value=2.3e-26  Score=211.21  Aligned_cols=155  Identities=21%  Similarity=0.302  Sum_probs=119.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+.                                            
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l  419 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF  419 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence            367888889999999999999999899999999432                                            


Q ss_pred             ---------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           96 ---------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        96 ---------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                           +.....++.+++.||.|||+.+   |+||||||+|||++.++..++ |||.+       
T Consensus       420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred             EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence                                 1345678999999999999988   999999999999999988877 45432       


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++|+||||+++|||++|+.||......  .+...+..... .++.          
T Consensus       497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~-~~p~----------  563 (674)
T 3pfq_A          497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIMEHNV-AYPK----------  563 (674)
T ss_dssp             CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHSSCC-CCCT----------
T ss_pred             cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH--HHHHHHHhCCC-CCCc----------
Confidence                                45788999999999999999999999753221  11111111100 0000          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                                        ....++.+++..||+.||++||++
T Consensus       564 ------------------~~s~~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          564 ------------------SMSKEAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             ------------------TSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred             ------------------cCCHHHHHHHHHHccCCHHHCCCC
Confidence                              223457889999999999999998

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.93  E-value=6.7e-27  Score=198.58  Aligned_cols=166  Identities=20%  Similarity=0.297  Sum_probs=119.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||++....+++.+|+|.+..                                           
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g  100 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG  100 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence            3567788899999999999999988999999994322                                           


Q ss_pred             ---------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-C---ceee-eeccCC---------
Q 044875           97 ---------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-M---TTHV-EYGMGN---------  147 (268)
Q Consensus        97 ---------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~---~~~i-e~~~~~---------  147 (268)
                                     .....++.+++.||.|||+.+   ++||||||+||++..+ .   ..++ ||+.+.         
T Consensus       101 g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~  177 (342)
T 2qr7_A          101 GELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL  177 (342)
T ss_dssp             CBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce
Confidence                           345678999999999999998   9999999999997543 2   2344 555331         


Q ss_pred             ------------------CcCccccEeechHHHHHHHhCCCCCCcccccc-cchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          148 ------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG-LGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       148 ------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        .++.++||||+|+++||+++|..||....... ..+..............         .  
T Consensus       178 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~---------~--  246 (342)
T 2qr7_A          178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGG---------Y--  246 (342)
T ss_dssp             CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCST---------T--
T ss_pred             eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcc---------c--
Confidence                              25678999999999999999999997532111 11111111110000000         0  


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ....+..+.+++..||+.||++|||+.++++
T Consensus       247 --------------~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          247 --------------WNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             --------------TTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             --------------cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                          0023455788999999999999999999884

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.93  E-value=1.3e-26  Score=197.97  Aligned_cols=112  Identities=28%  Similarity=0.443  Sum_probs=95.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....++..+|+|.+..                                            
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  112 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH  112 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence            567778899999999999999988899999994321                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                        .....++.+++.|+.|||+. +   ++|+||||+||+++.++..++ ||+.+          
T Consensus       113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~  189 (360)
T 3eqc_A          113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANS  189 (360)
T ss_dssp             CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccccccC
Confidence                              33567899999999999985 7   999999999999998888777 44432          


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                     ..++.++||||||++++|+++|+.||...
T Consensus       190 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  233 (360)
T 3eqc_A          190 FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  233 (360)
T ss_dssp             -CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred             CCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                           45788999999999999999999999753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=1.1e-25  Score=187.86  Aligned_cols=159  Identities=22%  Similarity=0.270  Sum_probs=120.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~   84 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY   84 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEE
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEE
Confidence            678889999999999999999988899999994321                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+..     
T Consensus        85 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             EEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccccCc
Confidence                                    345678899999999999988   999999999999998887776 33322     


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                                ..++.++||||+|++++|+++|+.||......  ........... .       
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~i~~~~~-~-------  231 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIY--KLFENIGKGSY-A-------  231 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHCCC-C-------
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHHhcCCC-C-------
Confidence                                      11256899999999999999999999753211  11111111000 0       


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                           ..                ..+...+.+++..||+.||++|||+.++++
T Consensus       232 -----~~----------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          232 -----IP----------------GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             -----CC----------------SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----CC----------------CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                 00                023445788999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.93  E-value=1.7e-26  Score=211.50  Aligned_cols=169  Identities=20%  Similarity=0.371  Sum_probs=126.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC---CCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP---DQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~---~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+..   .+..+|+|.+..                                         
T Consensus       390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv~  469 (656)
T 2j0j_A          390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM  469 (656)
T ss_dssp             GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEE
T ss_pred             ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEEE
Confidence            445566789999999999999853   356799994432                                         


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+        
T Consensus       470 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~  546 (656)
T 2j0j_A          470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  546 (656)
T ss_dssp             ECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred             EcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence                                 234678899999999999988   999999999999998887777 45433        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++||||||+++||+++ |..||......  ..............+          
T Consensus       547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~~~~~~~~----------  614 (656)
T 2j0j_A          547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMP----------  614 (656)
T ss_dssp             -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHHTCCCCCC----------
T ss_pred             eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCCCCCC----------
Confidence                                236778999999999999997 99999753221  111111111110000          


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                        ..++..+.+++..||+.||++|||+.++++.|+.+.+..
T Consensus       615 ------------------~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~  653 (656)
T 2j0j_A          615 ------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  653 (656)
T ss_dssp             ------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ------------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence                              133456889999999999999999999999999987653

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=2.8e-26  Score=189.41  Aligned_cols=171  Identities=18%  Similarity=0.285  Sum_probs=124.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV   84 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence            45677789999999999999998889999999432                                             


Q ss_pred             ----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC----ceee-eecc---
Q 044875           96 ----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM----TTHV-EYGM---  145 (268)
Q Consensus        96 ----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~----~~~i-e~~~---  145 (268)
                                            +.....++.+++.||.|||+.+   ++|+||||+||+++.+.    ..++ +|+.   
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~  161 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK  161 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence                                  1346789999999999999988   99999999999998765    4444 3332   


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             ...++.++||||||++++|+++|..||....... ..... ......     .++..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~-~~~~~~-----~~~~~  234 (283)
T 3bhy_A          162 IEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE-TLTNI-SAVNYD-----FDEEY  234 (283)
T ss_dssp             CC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHH-HTTCCC-----CCHHH
T ss_pred             ccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHH-HHHHh-HhcccC-----Ccchh
Confidence                                   2456789999999999999999999997532211 01111 000000     00000


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVKST  261 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~~~  261 (268)
                      .                    ...+..+.+++..||+.||++|||+.++++  .++.++..
T Consensus       235 ~--------------------~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          235 F--------------------SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             H--------------------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred             c--------------------ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence            0                    022445788999999999999999999996  66666543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.93  E-value=1.2e-26  Score=198.33  Aligned_cols=197  Identities=18%  Similarity=0.257  Sum_probs=131.8

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      ....++....++|...+.||+|+||.||+|... ++..||+|.+..                                  
T Consensus        12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~   90 (362)
T 3pg1_A           12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPN   90 (362)
T ss_dssp             HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTT
T ss_pred             HHHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcC
Confidence            446678888999999999999999999999987 589999994411                                  


Q ss_pred             -------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc
Q 044875           97 -------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 -------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill  133 (268)
                                                                 .....++.+++.||.|||+.+   ++||||||+||++
T Consensus        91 iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~  167 (362)
T 3pg1_A           91 ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILL  167 (362)
T ss_dssp             BCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEE
T ss_pred             ccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEE
Confidence                                                       335678999999999999988   9999999999999


Q ss_pred             CCCCceee-eeccC---------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhH
Q 044875          134 DNDMTTHV-EYGMG---------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF  185 (268)
Q Consensus       134 ~~~~~~~i-e~~~~---------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~  185 (268)
                      +.+...++ +|+.+                           ..++.++||||+|++++|+++|+.||....... .+...
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i  246 (362)
T 3pg1_A          168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNKI  246 (362)
T ss_dssp             CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHH
T ss_pred             cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence            98887777 33322                           357788999999999999999999997532211 11111


Q ss_pred             hhhhCccchhh---hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          186 VKMAVPDQISE---VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       186 ~~~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...........   ...+............... .............+.+++..||+.||++|||+.++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          247 VEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPA-RAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCC-CCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHcCCCChHHhhhccchhhhHHHHhhcccCCh-hhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            11111111110   0000000000000000000 0000001123456889999999999999999999984

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.93  E-value=8.9e-26  Score=197.54  Aligned_cols=111  Identities=23%  Similarity=0.434  Sum_probs=93.5

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            3678888999999999999999998999999994421                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                              .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.      
T Consensus       105 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             EEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             EEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence                                    345688999999999999998   999999999999999887777 3332      


Q ss_pred             --------------------------------------------CCCcCccccEeechHHHHHHHhCCCCCC
Q 044875          146 --------------------------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTS  173 (268)
Q Consensus       146 --------------------------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~  173 (268)
                                                                  ...++.++||||+||+++|+++|..|+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~  253 (432)
T 3n9x_A          182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI  253 (432)
T ss_dssp             -----------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred             cccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence                                                        2347788999999999999998766654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.92  E-value=1.5e-26  Score=198.47  Aligned_cols=156  Identities=24%  Similarity=0.311  Sum_probs=118.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++...+++.+|+|.+..                                            
T Consensus        38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv  117 (373)
T 2r5t_A           38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV  117 (373)
T ss_dssp             GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence            578888999999999999999998899999994321                                            


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+        
T Consensus       118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~  194 (373)
T 2r5t_A          118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS  194 (373)
T ss_dssp             EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence                                 334568899999999999988   999999999999999888777 44432        


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                         ..++.++|+||+|+++|||++|..||......  .......... ..+..           
T Consensus       195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~--~~~~~i~~~~-~~~~~-----------  260 (373)
T 2r5t_A          195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILNKP-LQLKP-----------  260 (373)
T ss_dssp             CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH--HHHHHHHHSC-CCCCS-----------
T ss_pred             ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHhcc-cCCCC-----------
Confidence                               34678999999999999999999999753221  1111111000 00000           


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSD  250 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~  250 (268)
                                       .....+.+++..||+.||.+||++.+
T Consensus       261 -----------------~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          261 -----------------NITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             -----------------SSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             -----------------CCCHHHHHHHHHHcccCHHhCCCCCC
Confidence                             22345788899999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.92  E-value=2.6e-26  Score=193.20  Aligned_cols=156  Identities=22%  Similarity=0.357  Sum_probs=119.7

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ...++|...+.||+|+||.||+|....+++.||+|.+..                                         
T Consensus        40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~  119 (320)
T 3a99_A           40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER  119 (320)
T ss_dssp             CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred             CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence            345678888999999999999999988999999994311                                         


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC-CCCceee-eecc
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-NDMTTHV-EYGM  145 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~-~~~~~~i-e~~~  145 (268)
                                                   .....++.+++.||.|||+.+   ++||||||+||+++ .+...++ ||+.
T Consensus       120 ~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~  196 (320)
T 3a99_A          120 PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGS  196 (320)
T ss_dssp             SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence                                         234668899999999999988   99999999999998 5666666 4543


Q ss_pred             C-------------------------CC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcc
Q 044875          146 G-------------------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLD  199 (268)
Q Consensus       146 ~-------------------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d  199 (268)
                      +                         .. ++.++||||||+++||+++|+.||.....       ......  .    + 
T Consensus       197 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-------~~~~~~--~----~-  262 (320)
T 3a99_A          197 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQV--F----F-  262 (320)
T ss_dssp             CEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCC--C----C-
T ss_pred             ccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh-------hhcccc--c----c-
Confidence            2                         12 25678999999999999999999974211       000000  0    0 


Q ss_pred             hhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                             ..                ..+..+.+++..||+.||++|||++++++
T Consensus       263 -------~~----------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          263 -------RQ----------------RVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             -------SS----------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -------cc----------------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                   00                22345788999999999999999999985

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.92  E-value=3e-26  Score=196.20  Aligned_cols=169  Identities=15%  Similarity=0.142  Sum_probs=122.5

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEE-----ecCCCeEEEEeecCc----------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGI-----LDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~-----~~~~~~~vavK~l~~----------------------------------   96 (268)
                      +....++|...+.||+|+||.||+|.     ...+++.||+|.+..                                  
T Consensus        60 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~  139 (365)
T 3e7e_A           60 FQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ  139 (365)
T ss_dssp             EECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred             EEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence            33445667778899999999999994     455788999994332                                  


Q ss_pred             --------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---------
Q 044875           97 --------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---------  135 (268)
Q Consensus        97 --------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---------  135 (268)
                                                      .....++.+++.||.|||+.+   ++||||||+|||++.         
T Consensus       140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~  216 (365)
T 3e7e_A          140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED  216 (365)
T ss_dssp             SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred             CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence                                            336789999999999999988   999999999999988         


Q ss_pred             --CCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchh
Q 044875          136 --DMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH  183 (268)
Q Consensus       136 --~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~  183 (268)
                        +...++ |||.+                             ..++.++||||||+++||+++|+.||.........+ 
T Consensus       217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~-  295 (365)
T 3e7e_A          217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKP-  295 (365)
T ss_dssp             --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEE-
T ss_pred             cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceee-
Confidence              666666 55533                             346889999999999999999999986432211100 


Q ss_pred             hHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCC-CChHHHHHHHHHhHHHH
Q 044875          184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQER-MDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       184 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R-Ps~~~v~~~L~~l~~~~  262 (268)
                                 ...+.    ..                   ...+.+.+++..|++.+|.+| |+++++.+.|+++.+..
T Consensus       296 -----------~~~~~----~~-------------------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~  341 (365)
T 3e7e_A          296 -----------EGLFR----RL-------------------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH  341 (365)
T ss_dssp             -----------CSCCT----TC-------------------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             -----------chhcc----cc-------------------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence                       00000    00                   012235567777999999999 56888888888877654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.92  E-value=1.2e-26  Score=192.73  Aligned_cols=159  Identities=16%  Similarity=0.256  Sum_probs=120.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus        15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   94 (294)
T 2rku_A           15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL   94 (294)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence            45677789999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.|+.|||+.+   ++|+||||+||+++.++..++ +|+..         
T Consensus        95 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~  171 (294)
T 2rku_A           95 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER  171 (294)
T ss_dssp             ECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccCccc
Confidence                               1346778999999999999988   999999999999998887777 33322         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++||||+|++++|+++|+.||........ ... ...... ..+.            
T Consensus       172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~-~~~~~~-~~~~------------  236 (294)
T 2rku_A          172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET-YLR-IKKNEY-SIPK------------  236 (294)
T ss_dssp             BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH-HHH-HHTTCC-CCCT------------
T ss_pred             cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH-HhhccC-CCcc------------
Confidence                              3367789999999999999999999975322110 000 000000 0000            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      .....+.+++..||+.||++|||+.++++
T Consensus       237 ----------------~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          237 ----------------HINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             ----------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ----------------ccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                            22345778999999999999999999885

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.92  E-value=4.9e-26  Score=194.00  Aligned_cols=184  Identities=18%  Similarity=0.360  Sum_probs=124.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  103 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD  103 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence            567778899999999999999988999999994421                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..       
T Consensus       104 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~  180 (353)
T 3coi_A          104 FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEM  180 (353)
T ss_dssp             CEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred             EEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccCCCCCc
Confidence                                  234678999999999999988   999999999999999887777 34322       


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-chhhhcchh----h
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-QISEVLDPL----F  202 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~d~~----~  202 (268)
                                        ..++.++||||+|++++|+++|+.||....... .+....... .+. .....+...    .
T Consensus       181 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~  259 (353)
T 3coi_A          181 TGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAAKSY  259 (353)
T ss_dssp             ---CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSCHHHHHH
T ss_pred             cccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhhHHHHHH
Confidence                              356789999999999999999999997533211 111111111 110 000000000    0


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..........    .+ ..........+.+++..||+.||++|||++++++
T Consensus       260 ~~~~~~~~~~----~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          260 IQSLPQTPRK----DF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHTSCBCSSC----CT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhCcCCCCc----cH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0000000000    00 0001133566889999999999999999999974

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.92  E-value=1.8e-26  Score=190.71  Aligned_cols=157  Identities=20%  Similarity=0.294  Sum_probs=114.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+.                                             
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~   90 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQN   90 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            56777889999999999999998889999999432                                             


Q ss_pred             -----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---------------
Q 044875           96 -----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---------------  137 (268)
Q Consensus        96 -----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---------------  137 (268)
                                             +.....++.+++.||.|||+.+   ++||||||+||+++.+.               
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~  167 (289)
T 1x8b_A           91 EYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDEDDWA  167 (289)
T ss_dssp             ECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC------------------
T ss_pred             EecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCccccccccccccc
Confidence                                   1345678999999999999988   99999999999998543               


Q ss_pred             ----ceee-eeccC------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh
Q 044875          138 ----TTHV-EYGMG------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM  188 (268)
Q Consensus       138 ----~~~i-e~~~~------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~  188 (268)
                          ..++ +|+..                        ..++.++||||||++++|+++|.+++....    ....... 
T Consensus       168 ~~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----~~~~~~~-  242 (289)
T 1x8b_A          168 SNKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD----QWHEIRQ-  242 (289)
T ss_dssp             --CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH----HHHHHHT-
T ss_pred             CCceEEEEcccccccccCCccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh----HHHHHHc-
Confidence                3344 44422                        134578999999999999999987764321    1111111 


Q ss_pred             hCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       189 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ......+.                            .....+.+++..||+.||++|||+.++++
T Consensus       243 ~~~~~~~~----------------------------~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          243 GRLPRIPQ----------------------------VLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             TCCCCCSS----------------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCCCCCc----------------------------ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            10000000                            22345788999999999999999999974

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.92  E-value=1.3e-26  Score=201.20  Aligned_cols=171  Identities=17%  Similarity=0.241  Sum_probs=126.2

Q ss_pred             HHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------
Q 044875           53 YESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------   96 (268)
Q Consensus        53 ~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------   96 (268)
                      +.++....++|...+.||+|+||.||+|+...+++.+|+|.+..                                    
T Consensus        61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD  140 (410)
T ss_dssp             HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence            34555567889999999999999999999998899999994321                                    


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+  
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~  217 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMK  217 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEe
Confidence                                       345678899999999999988   999999999999999888877 55432  


Q ss_pred             --------------------------CC----cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 --------------------------NQ----FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 --------------------------~~----~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                ..    ++.++|+||||+++|||++|+.||....... ..............+.
T Consensus       218 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~~p~  296 (410)
T 3v8s_A          218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG-TYSKIMNHKNSLTFPD  296 (410)
T ss_dssp             CCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHHHHCCCCT
T ss_pred             eccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh-HHHHHHhccccccCCC
Confidence                                      11    6678999999999999999999997532211 0111111000000000


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCC--CCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE--RMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~--RPs~~~v~~  253 (268)
                      .                          ......+.+++..|++.+|.+  ||++++|.+
T Consensus       297 ~--------------------------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          297 D--------------------------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             T--------------------------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             c--------------------------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            0                          022345778889999999988  999999874

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.92  E-value=5.6e-26  Score=195.10  Aligned_cols=164  Identities=20%  Similarity=0.262  Sum_probs=114.1

Q ss_pred             CCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------------   96 (268)
                      .+.||+|+||.||+|....+++.||+|.+..                                                 
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            4579999999999999988899999994321                                                 


Q ss_pred             -------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc--CCCCceee-eeccC--------------
Q 044875           97 -------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL--DNDMTTHV-EYGMG--------------  146 (268)
Q Consensus        97 -------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill--~~~~~~~i-e~~~~--------------  146 (268)
                                   .....++.+++.||.|||+.+   ++||||||+||++  +.+...++ ||+..              
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~g  250 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFG  250 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCS
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccC
Confidence                         345678899999999999988   9999999999999  45555555 44432              


Q ss_pred             ------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhh
Q 044875          147 ------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTA  214 (268)
Q Consensus       147 ------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~  214 (268)
                                  ..++.++||||||+++||+++|+.||...... ..+.......+...     +..             
T Consensus       251 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~~~~~~-----~~~-------------  311 (373)
T 2x4f_A          251 TPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILACRWDLE-----DEE-------------  311 (373)
T ss_dssp             SCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCSC-----SGG-------------
T ss_pred             CCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhccCCCC-----hhh-------------
Confidence                        34577899999999999999999999753221 11111111111000     000             


Q ss_pred             HHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          215 EENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                              .......+.+++..||+.||++|||+.++++  ++....
T Consensus       312 --------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          312 --------FQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             --------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred             --------hccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence                    0022456788999999999999999999985  655443

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.92  E-value=4.7e-26  Score=195.24  Aligned_cols=190  Identities=18%  Similarity=0.252  Sum_probs=121.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~   98 (373)
T 1q8y_A           19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK   98 (373)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred             CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence            578888999999999999999988999999994431                                            


Q ss_pred             --------------------------------cchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCC------CC
Q 044875           97 --------------------------------CTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDN------DM  137 (268)
Q Consensus        97 --------------------------------~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~------~~  137 (268)
                                                      .....++.+++.||.|||+. +   ++||||||+||+++.      ..
T Consensus        99 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~~~~  175 (373)
T 1q8y_A           99 GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLI  175 (373)
T ss_dssp             ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEE
T ss_pred             CCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCcCcc
Confidence                                            23467889999999999997 8   999999999999953      22


Q ss_pred             ceee-eecc------------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccc-----cchhhHhh
Q 044875          138 TTHV-EYGM------------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG-----LGLHNFVK  187 (268)
Q Consensus       138 ~~~i-e~~~------------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~-----~~~~~~~~  187 (268)
                      ..++ +|+.                        +..++.++||||||+++||+++|+.||.......     ..+.....
T Consensus       176 ~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  255 (373)
T 1q8y_A          176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE  255 (373)
T ss_dssp             EEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHH
T ss_pred             eEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHH
Confidence            3444 4443                        2457889999999999999999999997543211     11111111


Q ss_pred             hhC--ccch-------hhhcchh-hhcCCCccchhhhHH--hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          188 MAV--PDQI-------SEVLDPL-FVAGGEEEGEKTAEE--NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       188 ~~~--~~~~-------~~~~d~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...  +..+       ...++.. .............+.  .............+.+++..||+.||++|||++++++
T Consensus       256 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          256 LLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            110  0000       0000000 000000000000000  0011223467888999999999999999999999985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.92  E-value=5.1e-26  Score=201.92  Aligned_cols=162  Identities=22%  Similarity=0.340  Sum_probs=120.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.||+|.+.                                             
T Consensus        22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  101 (486)
T 3mwu_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (486)
T ss_dssp             HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence            45777889999999999999998889999999432                                             


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eeccC-------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGMG-------  146 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~~-------  146 (268)
                                        +.....++.+++.||.|||+.+   ++||||||+||+++.   +...++ +|+.+       
T Consensus       102 ~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~  178 (486)
T 3mwu_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (486)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred             cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC
Confidence                              1345789999999999999998   999999999999954   334555 45433       


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhcCCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~  207 (268)
                                        +.++.++||||+|+++||+++|..||......  .+........ ....+.     .     
T Consensus       179 ~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~-----~-----  246 (486)
T 3mwu_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAFDLPQ-----W-----  246 (486)
T ss_dssp             ---CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCSCSGG-----G-----
T ss_pred             ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCCCcc-----c-----
Confidence                              23678899999999999999999999753221  1111111111 000000     0     


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ...+..+.+++..||+.||.+|||+.++++
T Consensus       247 ----------------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          247 ----------------RTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             ----------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ----------------CCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence                            022345788999999999999999999985

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.92  E-value=1.4e-26  Score=196.11  Aligned_cols=159  Identities=16%  Similarity=0.242  Sum_probs=120.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+.                                             
T Consensus        41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  120 (335)
T 2owb_A           41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL  120 (335)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            56777889999999999999999889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+..         
T Consensus       121 e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~  197 (335)
T 2owb_A          121 ELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER  197 (335)
T ss_dssp             CCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCC
T ss_pred             ecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccCccc
Confidence                               1346778999999999999988   999999999999998887777 44432         


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++||||||+++||+++|+.||.......  .......... .+..            
T Consensus       198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~-~~~~------------  262 (335)
T 2owb_A          198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE--TYLRIKKNEY-SIPK------------  262 (335)
T ss_dssp             BCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH--HHHHHHHTCC-CCCT------------
T ss_pred             ccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHhcCCC-CCCc------------
Confidence                              235678999999999999999999997532111  0000000000 0000            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      .....+.+++..||+.||++|||+.++++
T Consensus       263 ----------------~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          263 ----------------HINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             ----------------TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ----------------cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                            22345778999999999999999999985

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.92  E-value=4.2e-26  Score=187.67  Aligned_cols=159  Identities=23%  Similarity=0.381  Sum_probs=119.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.+|+|.+..                                            
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   90 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM   90 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence            567788899999999999999988899999994321                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.+++.||.|||+.+   ++|+||||+||+++.+...++ +|+..         
T Consensus        91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~  167 (276)
T 2h6d_A           91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFL  167 (276)
T ss_dssp             ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred             eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCcce
Confidence                                345678999999999999998   999999999999998877776 33321         


Q ss_pred             -----------------CC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 -----------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 -----------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                       .. .+.++||||+|++++|+++|..||......  ........... ..+             
T Consensus       168 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~-~~~-------------  231 (276)
T 2h6d_A          168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVP--TLFKKIRGGVF-YIP-------------  231 (276)
T ss_dssp             ---------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCC-------------
T ss_pred             ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHH--HHHHHhhcCcc-cCc-------------
Confidence                             12 257899999999999999999999753211  11111111000 000             


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ......+.+++..||+.||++|||+.++++
T Consensus       232 ---------------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          232 ---------------EYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             ---------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------hhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence                           022345788999999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.92  E-value=4.8e-26  Score=190.06  Aligned_cols=163  Identities=21%  Similarity=0.296  Sum_probs=120.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.+|+|.+..                                            
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (304)
T 2jam_A            9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV   88 (304)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred             ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence            467777899999999999999988899999994321                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc---CCCCceee-eecc----------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL---DNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill---~~~~~~~i-e~~~----------  145 (268)
                                       .....++.+++.||.|||+.+   ++|+||||+||++   +.+...++ +|+.          
T Consensus        89 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~  165 (304)
T 2jam_A           89 SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS  165 (304)
T ss_dssp             CSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTH
T ss_pred             CCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccc
Confidence                             345678899999999999988   9999999999999   55555555 4442          


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                     +..++.++||||+|++++|+++|+.||......  .+..............     .        
T Consensus       166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~-----~--------  230 (304)
T 2jam_A          166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKEGYYEFESP-----F--------  230 (304)
T ss_dssp             HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHCCCCCCTT-----T--------
T ss_pred             cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCCCcc-----c--------
Confidence                           234678999999999999999999999753221  1111111111000000     0        


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ....+..+.+++..||+.||++|||+.++++
T Consensus       231 ------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          231 ------------WDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             ------------TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                        0023456888999999999999999999985

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.92  E-value=1.3e-26  Score=201.26  Aligned_cols=173  Identities=18%  Similarity=0.246  Sum_probs=126.0

Q ss_pred             cCHHHHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------
Q 044875           51 ISYESLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------   96 (268)
Q Consensus        51 ~~~~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------   96 (268)
                      +.+.+.....++|...+.||+|+||.||+++...+++.||+|.+..                                  
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            4455666667899999999999999999999988999999994421                                  


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG  144 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~  144 (268)
                                                     .....++.+++.||.|||+.+   ++||||||+|||++.++..++ ||+
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFG  207 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFG  207 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCT
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeech
Confidence                                           335668889999999999988   999999999999999888877 444


Q ss_pred             cC-----------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh
Q 044875          145 MG-----------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA  189 (268)
Q Consensus       145 ~~-----------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~  189 (268)
                      .+                                   ..++.++|+|||||++||+++|+.||....... .........
T Consensus       208 la~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~  286 (412)
T 2vd5_A          208 SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHYK  286 (412)
T ss_dssp             TCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHH
T ss_pred             hheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhcc
Confidence            22                                   236788999999999999999999997532211 011111100


Q ss_pred             CccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCC---CChHHHHH
Q 044875          190 VPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQER---MDTSDVVN  253 (268)
Q Consensus       190 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~R---Ps~~~v~~  253 (268)
                      .....     +...                    ...+.++.+++..||+ +|.+|   |+++++.+
T Consensus       287 ~~~~~-----p~~~--------------------~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          287 EHLSL-----PLVD--------------------EGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             HHCCC-----C------------------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             cCcCC-----Cccc--------------------cCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            00000     0000                    0234557889999999 99998   58888763

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=5.8e-26  Score=191.19  Aligned_cols=184  Identities=19%  Similarity=0.320  Sum_probs=124.8

Q ss_pred             HHhCCCCcCCcccCCCcceEEEEEec-CCCeEEEEeecC-----------------------------------------
Q 044875           58 KATGGFSSANIIGAGSFGSVCKGILD-PDQTVVSVRDFK-----------------------------------------   95 (268)
Q Consensus        58 ~~~~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~l~-----------------------------------------   95 (268)
                      .+.++|...+.||+|+||.||+|... .+++.||+|.+.                                         
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            34577888899999999999999984 678999999331                                         


Q ss_pred             -------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-ee
Q 044875           96 -------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EY  143 (268)
Q Consensus        96 -------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~  143 (268)
                                                     +.....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|
T Consensus        88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Df  164 (326)
T 1blx_A           88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF  164 (326)
T ss_dssp             CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSC
T ss_pred             cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecC
Confidence                                           1335678899999999999988   999999999999998887777 44


Q ss_pred             ccC--------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-c--cch
Q 044875          144 GMG--------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-P--DQI  194 (268)
Q Consensus       144 ~~~--------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~  194 (268)
                      +..                          ..++.++||||||+++||+++|+.||....... .+........ +  ...
T Consensus       165 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          165 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGS
T ss_pred             cccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCcccC
Confidence            422                          346788999999999999999999997533211 1111111110 0  000


Q ss_pred             hhhcc-hh-hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLD-PL-FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..... +. .......   .     ............+.+++..||+.||++|||+.++++
T Consensus       244 ~~~~~~~~~~~~~~~~---~-----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          244 PRDVALPRQAFHSKSA---Q-----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             CTTCSSCGGGSCCCCC---C-----CGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccccchhhhcccCc---c-----hhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            00000 00 0000000   0     000001133456788999999999999999999984

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.92  E-value=2.7e-26  Score=203.56  Aligned_cols=166  Identities=21%  Similarity=0.348  Sum_probs=122.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||++....+++.||+|.+..                                            
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  105 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG  105 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence            457777899999999999999988999999995421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC---CCCceee-eeccC------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD---NDMTTHV-EYGMG------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~---~~~~~~i-e~~~~------  146 (268)
                                          .....++.+++.||.|||+.+   ++||||||+||+++   .+...++ +|+.+      
T Consensus       106 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  182 (484)
T 3nyv_A          106 EVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS  182 (484)
T ss_dssp             CCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCC
T ss_pred             ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccc
Confidence                                345679999999999999998   99999999999994   4455555 44321      


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhcCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~  206 (268)
                                         +.++.++||||+|+++||+++|+.||......  .+........ ....+.     .    
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~-----~----  251 (484)
T 3nyv_A          183 KKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY--DILKKVEKGKYTFELPQ-----W----  251 (484)
T ss_dssp             CSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCCSGG-----G----
T ss_pred             cccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHcCCCCCCCcc-----c----
Confidence                               35788999999999999999999999753221  1111111111 000000     0    


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQT  257 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~  257 (268)
                                       ...+..+.+++..||+.||.+|||+.++++  +++.
T Consensus       252 -----------------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~  287 (484)
T 3nyv_A          252 -----------------KKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT  287 (484)
T ss_dssp             -----------------GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHH
T ss_pred             -----------------ccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcc
Confidence                             022445788999999999999999999984  4443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.92  E-value=7.2e-26  Score=201.33  Aligned_cols=169  Identities=18%  Similarity=0.295  Sum_probs=120.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||.||+|....++..+|+|.+..                                            
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e  116 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME  116 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence            457778899999999999999988899999994321                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eeccC-------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGMG-------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~~-------  146 (268)
                                         .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++ +||.+       
T Consensus       117 ~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~  193 (494)
T 3lij_A          117 CYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK  193 (494)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc
Confidence                               345678999999999999988   99999999999997643   3444 44432       


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++||||+|+++||+++|..||......  .+............    .+.+      
T Consensus       194 ~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~----~~~~------  261 (494)
T 3lij_A          194 KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ--EILRKVEKGKYTFD----SPEW------  261 (494)
T ss_dssp             CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCC----SGGG------
T ss_pred             cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCCCC----chhc------
Confidence                              34678999999999999999999999753221  11111111111000    0000      


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHhH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTVK  259 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l~  259 (268)
                                     ...+..+.+++..||+.||.+|||+.++++  ++.+..
T Consensus       262 ---------------~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~  299 (494)
T 3lij_A          262 ---------------KNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC  299 (494)
T ss_dssp             ---------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred             ---------------ccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence                           022345788999999999999999999984  565543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.92  E-value=1.9e-26  Score=194.46  Aligned_cols=120  Identities=26%  Similarity=0.385  Sum_probs=87.2

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------------------------
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------------------------  146 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------------------------  146 (268)
                      ...++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+..                               
T Consensus       166 ~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          166 CLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             HHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            3568899999999999988   999999999999998887777 44432                               


Q ss_pred             --------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhh
Q 044875          147 --------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENI  218 (268)
Q Consensus       147 --------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~  218 (268)
                              ..++.++||||+|++++|+++|..|+.....    ..........+   .                      
T Consensus       243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~----~~~~~~~~~~~---~----------------------  293 (332)
T 3qd2_B          243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR----IITDVRNLKFP---L----------------------  293 (332)
T ss_dssp             SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHH----HHHHHHTTCCC---H----------------------
T ss_pred             cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHH----HHHHhhccCCC---c----------------------
Confidence                    3467899999999999999998766532110    00000000000   0                      


Q ss_pred             hhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          219 KKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       219 ~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         ........+.+++..||+.||++|||+.++++
T Consensus       294 ---~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          294 ---LFTQKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             ---HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             ---ccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence               01133445688999999999999999999985

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=6e-26  Score=193.72  Aligned_cols=163  Identities=21%  Similarity=0.284  Sum_probs=118.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+++..   .+++.||+|.+..                                         
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  133 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  133 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence            57888899999999999999983   4789999995431                                         


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.+++.||.|||+.+   ++||||||+||+++.++..++ ||+.+    
T Consensus       134 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          134 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             EEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence                                     345678889999999999988   999999999999999888777 44321    


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                                ..++.++||||||+++||+++|+.||....... ............      .+
T Consensus       211 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~------~~  283 (355)
T 1vzo_A          211 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS------EP  283 (355)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC------CC
T ss_pred             cCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc------CC
Confidence                                      235678999999999999999999997432211 111111110000      00


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                          ..                +......+.+++..||+.||.+||     ++.++++
T Consensus       284 ----~~----------------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          284 ----PY----------------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             ----CC----------------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----CC----------------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence                00                012334578899999999999999     8888875

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.92  E-value=7.9e-26  Score=190.86  Aligned_cols=159  Identities=18%  Similarity=0.282  Sum_probs=118.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEec---CCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD---PDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~---~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||++...   .+++.+|+|.+..                                         
T Consensus        17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   96 (327)
T 3a62_A           17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred             HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence            56778899999999999999984   5789999995431                                         


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.+++.||.|||+.+   ++||||||+||+++.++..++ +|+..     
T Consensus        97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~  173 (327)
T 3a62_A           97 YLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIH  173 (327)
T ss_dssp             EEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC-----
T ss_pred             EEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCccccccc
Confidence                                    235668899999999999988   999999999999998887777 44422     


Q ss_pred             ----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                            ..++.++||||+|+++||+++|+.||....... ........ .. .++         
T Consensus       174 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~-~~-~~p---------  241 (327)
T 3a62_A          174 DGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKK-TIDKILKC-KL-NLP---------  241 (327)
T ss_dssp             -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHT-CC-CCC---------
T ss_pred             CCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhC-CC-CCC---------
Confidence                                  346788999999999999999999997532211 01111110 00 000         


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                         ......+.+++..||+.||++||     ++.++++
T Consensus       242 -------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          242 -------------------PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             -------------------TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             -------------------CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence                               02234578899999999999999     5667654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.92  E-value=1.2e-25  Score=187.05  Aligned_cols=164  Identities=20%  Similarity=0.282  Sum_probs=122.8

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+..                                           
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   95 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence            4678888999999999999999988999999995420                                           


Q ss_pred             ----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-
Q 044875           97 ----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-  146 (268)
Q Consensus        97 ----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-  146 (268)
                                                  .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.. 
T Consensus        96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~  172 (298)
T 1phk_A           96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSC  172 (298)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecccchh
Confidence                                        345778999999999999988   999999999999998887777 34322 


Q ss_pred             -------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchh
Q 044875          147 -------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS  195 (268)
Q Consensus       147 -------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  195 (268)
                                                     ..++.++||||||++++|+++|..||......  .............. 
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~-  249 (298)
T 1phk_A          173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM--LMLRMIMSGNYQFG-  249 (298)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHTCCCCC-
T ss_pred             hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH--HHHHHHhcCCcccC-
Confidence                                           23567899999999999999999999753211  11111111100000 


Q ss_pred             hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          196 EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       196 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         .+.                     ....+..+.+++..||+.||++|||+.++++
T Consensus       250 ---~~~---------------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          250 ---SPE---------------------WDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             ---TTT---------------------GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ---ccc---------------------ccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence               000                     0123456889999999999999999999974

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.92  E-value=2.1e-25  Score=193.62  Aligned_cols=107  Identities=21%  Similarity=0.400  Sum_probs=82.0

Q ss_pred             CCcccCCCcceEEEEEec--CCCeEEEEeecCc-----------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILD--PDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      .++||+|+||.||+|...  .+++.||+|.+..                                               
T Consensus        26 g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~~  105 (405)
T 3rgf_A           26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHD  105 (405)
T ss_dssp             SCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSEE
T ss_pred             CcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCCC
Confidence            457999999999999975  4678999994432                                               


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc----CCCCceee-eeccC---
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL----DNDMTTHV-EYGMG---  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill----~~~~~~~i-e~~~~---  146 (268)
                                            .....++.+++.||.|||+.+   ++||||||+|||+    +.++..++ ||+.+   
T Consensus       106 l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          106 LWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLF  182 (405)
T ss_dssp             HHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCEEECCTTCCC--
T ss_pred             HHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcEEEEECCCceec
Confidence                                  224678899999999999998   9999999999999    55556666 34322   


Q ss_pred             ----------------------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                                  ..++.++|||||||++||+++|+.||...
T Consensus       183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~  239 (405)
T 3rgf_A          183 NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  239 (405)
T ss_dssp             --------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             CCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence                                        23778899999999999999999999743

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.92  E-value=2.2e-25  Score=198.74  Aligned_cols=164  Identities=20%  Similarity=0.341  Sum_probs=120.3

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||.||+|....+++.+|+|.+..                                          
T Consensus        34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            34678888999999999999999988899999995420                                          


Q ss_pred             --------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee
Q 044875           97 --------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV  141 (268)
Q Consensus        97 --------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i  141 (268)
                                                      .....++.+++.||.|||+.+   ++||||||+||+++.+.   ..++
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl  190 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKI  190 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSSEEE
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCccEEE
Confidence                                            345778999999999999988   99999999999998764   3444


Q ss_pred             -eeccC-------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-ch
Q 044875          142 -EYGMG-------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QI  194 (268)
Q Consensus       142 -e~~~~-------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~  194 (268)
                       +|+.+                         ..++.++||||+|+++|++++|..||......  .+.......... ..
T Consensus       191 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~--~~~~~i~~~~~~~~~  268 (504)
T 3q5i_A          191 VDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ--DIIKKVEKGKYYFDF  268 (504)
T ss_dssp             CCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCCH
T ss_pred             EECCCCEEcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCCCc
Confidence             44432                         34678999999999999999999999753221  111111111100 00


Q ss_pred             hhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 SEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+                          ...+..+.+++..||+.||.+|||++++++
T Consensus       269 ~~~--------------------------~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          269 NDW--------------------------KNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHH--------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccc--------------------------CCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            000                          022455788999999999999999999984

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=7.2e-26  Score=203.06  Aligned_cols=162  Identities=25%  Similarity=0.409  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec---------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF---------------------------------------------   94 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l---------------------------------------------   94 (268)
                      .++|...+.||+|+||.||+|....+++.||+|.+                                             
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            35678888999999999999999889999999933                                             


Q ss_pred             ---------------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           95 ---------------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        95 ---------------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                           ++.....++.+++.||.|||+.+   ++||||||+||+++.++..++ |||.+      
T Consensus       263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence                                 22345678899999999999988   999999999999999888877 44432      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccc--cchhhHhhhhCccchhhhcchhhhc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG--LGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                          ..++.++|+||+|+++||+++|+.||.......  ..+...... .+.....        
T Consensus       340 ~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p~--------  410 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-VPEEYSE--------  410 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCCT--------
T ss_pred             ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhc-ccccCCc--------
Confidence                                346788999999999999999999997532211  111111111 0111100        


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                          .....+.+++..||+.||.+||     +++++++
T Consensus       411 --------------------~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          411 --------------------RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             --------------------TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             --------------------cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                                2234578899999999999999     6777763

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.92  E-value=1.2e-25  Score=200.88  Aligned_cols=158  Identities=18%  Similarity=0.302  Sum_probs=116.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+++...+++.||+|.+.                                             
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            56777788999999999999998889999999332                                             


Q ss_pred             -----------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc------
Q 044875           96 -----------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM------  145 (268)
Q Consensus        96 -----------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~------  145 (268)
                                             +.....++.+++.||.|||+.+   ++||||||+||+++.++..++ +||.      
T Consensus       265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~  341 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA  341 (543)
T ss_dssp             CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence                                   1234567899999999999988   999999999999999888877 3432      


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           +..++.++|+||+||++|||++|+.||....... ..............          
T Consensus       342 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~-~~~~~~~~i~~~~~----------  410 (543)
T 3c4z_A          342 GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRVLEQAV----------  410 (543)
T ss_dssp             TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCC-CHHHHHHHHHHCCC----------
T ss_pred             CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccch-hHHHHHHHHhhccc----------
Confidence                                 2347889999999999999999999997532211 11111111000000          


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCCh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT  248 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~  248 (268)
                      ..+                ...+..+.+++..||+.||++||++
T Consensus       411 ~~p----------------~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          411 TYP----------------DKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             CCC----------------TTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CCC----------------cccCHHHHHHHHHhccCCHhHCCCC
Confidence            000                0224457788999999999999976

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=188.81  Aligned_cols=182  Identities=15%  Similarity=0.300  Sum_probs=116.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~   90 (320)
T 2i6l_A           11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS   90 (320)
T ss_dssp             TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred             CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence            567778899999999999999988899999993211                                            


Q ss_pred             -----------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC-CCCceee-eecc
Q 044875           97 -----------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-NDMTTHV-EYGM  145 (268)
Q Consensus        97 -----------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~-~~~~~~i-e~~~  145 (268)
                                                   .....++.+++.||.|||+.+   ++||||||+||+++ .+...++ +|+.
T Consensus        91 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~Dfg~  167 (320)
T 2i6l_A           91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGL  167 (320)
T ss_dssp             CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred             ccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEEEccCcc
Confidence                                         234678899999999999988   99999999999997 4555555 3432


Q ss_pred             C-------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--
Q 044875          146 G-------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--  192 (268)
Q Consensus       146 ~-------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--  192 (268)
                      .                               ..++.++||||||++++|+++|+.||....... ....... ..+.  
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~-~~~~~~  245 (320)
T 2i6l_A          168 ARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILE-SIPVVH  245 (320)
T ss_dssp             CBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-HSCCCC
T ss_pred             ccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hcCCCc
Confidence            2                               346778999999999999999999997543211 1111111 1110  


Q ss_pred             --chhhh---cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          193 --QISEV---LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       193 --~~~~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                        ...+.   +..............      ........+..+.+++..||+.||++|||++++++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          246 EEDRQELLSVIPVYIRNDMTEPHKP------LTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHHHTTSCHHHHHHTTSCCCC------HHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhhhhcCcccccccccCCCCC------hhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence              00000   000000000000000      00001123566889999999999999999999985

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.91  E-value=1.8e-25  Score=187.14  Aligned_cols=158  Identities=20%  Similarity=0.313  Sum_probs=117.3

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------   96 (268)
                      .....++|...+.||+|+||.||+|....+++.||+|.+..                                       
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~  105 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD  105 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence            33445789999999999999999999988899999995421                                       


Q ss_pred             ---------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC-CCCceee-
Q 044875           97 ---------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD-NDMTTHV-  141 (268)
Q Consensus        97 ---------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~-~~~~~~i-  141 (268)
                                                       .....++.+++.||.|||+.+   ++|+||||+||+++ .+...++ 
T Consensus       106 ~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~  182 (312)
T 2iwi_A          106 WFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLI  182 (312)
T ss_dssp             EC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred             EEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEE
Confidence                                             234678999999999999998   99999999999998 6666666 


Q ss_pred             eeccC-------------------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchh
Q 044875          142 EYGMG-------------------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQIS  195 (268)
Q Consensus       142 e~~~~-------------------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~  195 (268)
                      +|+.+                         ..+ +.++||||+|+++||+++|+.||.....       ......  .. 
T Consensus       183 dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~--~~-  252 (312)
T 2iwi_A          183 DFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE-------ILEAEL--HF-  252 (312)
T ss_dssp             CCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHTCC--CC-
T ss_pred             EcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH-------Hhhhcc--CC-
Confidence            45432                         112 3489999999999999999999974211       000000  00 


Q ss_pred             hhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          196 EVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       196 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                 .                ......+.+++..||+.||++|||+.++++
T Consensus       253 -----------~----------------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          253 -----------P----------------AHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             -----------C----------------TTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             -----------c----------------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                       0                022345788999999999999999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.91  E-value=6.4e-25  Score=192.17  Aligned_cols=159  Identities=22%  Similarity=0.346  Sum_probs=112.3

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ...+.||+|+||+||.+... +|+.||||.+..                                               
T Consensus        18 ~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~gsL~   96 (434)
T 2rio_A           18 VSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ   96 (434)
T ss_dssp             EEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSEEHH
T ss_pred             eccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCCCHH
Confidence            34577999999999765444 789999994321                                               


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-------------Cceee-eec
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-------------MTTHV-EYG  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-------------~~~~i-e~~  144 (268)
                                        .....++.+++.||.|||+.+   ++||||||+||+++.+             ...++ ||+
T Consensus        97 ~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG  173 (434)
T 2rio_A           97 DLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG  173 (434)
T ss_dssp             HHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCT
T ss_pred             HHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceEEEEcccc
Confidence                              122468999999999999988   9999999999999653             23444 333


Q ss_pred             cC--------------------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhH
Q 044875          145 MG--------------------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNF  185 (268)
Q Consensus       145 ~~--------------------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~  185 (268)
                      .+                                      ..++.++|||||||+++|+++ |+.||.......   ...
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~i  250 (434)
T 2rio_A          174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SNI  250 (434)
T ss_dssp             TCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HHH
T ss_pred             cceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HHH
Confidence            11                                      346788999999999999999 999997432211   111


Q ss_pred             hhhhCc-cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          186 VKMAVP-DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       186 ~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...... ......                        .....+.++.+++..||+.||.+|||+.++++
T Consensus       251 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          251 IRGIFSLDEMKCL------------------------HDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHTCCCCCCCTTC------------------------CCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hcCCCCccccccc------------------------ccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence            111100 000000                        01255677899999999999999999999985

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.91  E-value=2.6e-25  Score=184.19  Aligned_cols=162  Identities=22%  Similarity=0.318  Sum_probs=119.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus        22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  101 (287)
T 2wei_A           22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE  101 (287)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEE
Confidence            568888999999999999999988899999994321                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC---ceee-eeccC-------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---TTHV-EYGMG-------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~---~~~i-e~~~~-------  146 (268)
                                         .....++.+++.||.|||+.+   ++|+||||+||+++.+.   ..++ +|+..       
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~  178 (287)
T 2wei_A          102 LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT  178 (287)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS
T ss_pred             ccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC
Confidence                               345788999999999999988   99999999999997543   3444 44422       


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhhhcCCC
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~  207 (268)
                                        +.++.++||||+|++++|+++|..||......  .......... ......           
T Consensus       179 ~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~-----------  245 (287)
T 2wei_A          179 KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVETGKYAFDLPQ-----------  245 (287)
T ss_dssp             SCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCCSGG-----------
T ss_pred             ccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCCCCCchh-----------
Confidence                              23677899999999999999999999753221  1111111110 000000           


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ....+..+.+++..||+.||++|||+.++++
T Consensus       246 ---------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          246 ---------------WRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             ---------------GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---------------hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence                           0022445788999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.91  E-value=3e-25  Score=184.61  Aligned_cols=161  Identities=20%  Similarity=0.384  Sum_probs=115.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|....+++.||+|.+..                                            
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~   85 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVK   85 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccc
Confidence            567778899999999999999988899999993211                                            


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM  145 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~  145 (268)
                                                    .....++.+++.||.|||+.+   ++|+||||+||+++.++..++ +|+.
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~  162 (303)
T 1zy4_A           86 KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGL  162 (303)
T ss_dssp             CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred             cCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEEeeCcc
Confidence                                          223568899999999999988   999999999999998877766 4432


Q ss_pred             C------------------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchh
Q 044875          146 G------------------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH  183 (268)
Q Consensus       146 ~------------------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~  183 (268)
                      .                                          ..++.++||||+|+++||+++   |+....... ...
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~-~~~  238 (303)
T 1zy4_A          163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV-NIL  238 (303)
T ss_dssp             CSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHH-HHH
T ss_pred             hhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHH-HHH
Confidence            1                                          246788999999999999998   444211111 111


Q ss_pred             hHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       184 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ........ ..+..+        .                ...+..+.+++..||+.||++|||+.++++
T Consensus       239 ~~~~~~~~-~~~~~~--------~----------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          239 KKLRSVSI-EFPPDF--------D----------------DNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHSTTC-CCCTTC--------C----------------TTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             Hhcccccc-ccCccc--------c----------------ccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            11111000 000000        0                133455788999999999999999999985

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.91  E-value=3.6e-25  Score=193.55  Aligned_cols=162  Identities=22%  Similarity=0.364  Sum_probs=110.7

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      ..+|...+.||+|+||+||..... +++.||||.+..                                           
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~-~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~  101 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA  101 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEES-SSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             cEEEecCCeeecCcCEEEEEEEEe-CCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence            346778889999999995543333 688999995432                                           


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-----Cceee-eecc---------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-----MTTHV-EYGM---------  145 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-----~~~~i-e~~~---------  145 (268)
                                      .....++.+++.||.|||+.+   ++||||||+||+++.+     ...++ |||.         
T Consensus       102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~  178 (432)
T 3p23_A          102 ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH  178 (432)
T ss_dssp             EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred             CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence                            245689999999999999988   9999999999999532     22223 3332         


Q ss_pred             ------------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          146 ------------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       146 ------------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                              ...++.++||||+||+++|+++ |..||........   ........  . ....+
T Consensus       179 ~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~---~~~~~~~~--~-~~~~~  252 (432)
T 3p23_A          179 SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA---NILLGACS--L-DCLHP  252 (432)
T ss_dssp             -------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH---HHHTTCCC--C-TTSCT
T ss_pred             ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH---HHHhccCC--c-cccCc
Confidence                                    1234568999999999999999 8888854221110   00000000  0 00000


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                            .                ......+.+++..||+.||++|||+.++++
T Consensus       253 ------~----------------~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          253 ------E----------------KHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             ------T----------------CHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ------c----------------ccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence                  0                033445778999999999999999999983

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.90  E-value=1e-24  Score=185.30  Aligned_cols=177  Identities=18%  Similarity=0.261  Sum_probs=120.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC------------------------c--------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK------------------------P--------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~------------------------~--------------------   96 (268)
                      ++|...+.||+|+||.||+|..  +++.||+|.+.                        .                    
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~  108 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC  108 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred             CceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence            6788889999999999999999  78999999331                        1                    


Q ss_pred             ------------------------------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCcccc
Q 044875           97 ------------------------------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 ------------------------------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill  133 (268)
                                                                .....++.+++.||.|||+ .+   ++|+||||+||++
T Consensus       109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~  185 (348)
T 2pml_X          109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM  185 (348)
T ss_dssp             SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred             EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence                                                      1245689999999999999 87   9999999999999


Q ss_pred             CCCCceee-eeccC-------------------------C-CcCc-cccEeechHHHHHHHhCCCCCCcccccccchhhH
Q 044875          134 DNDMTTHV-EYGMG-------------------------N-QFST-NGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNF  185 (268)
Q Consensus       134 ~~~~~~~i-e~~~~-------------------------~-~~~~-~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~  185 (268)
                      +.++..++ +|+..                         . .++. ++||||||++++|+++|+.||...... ......
T Consensus       186 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~  264 (348)
T 2pml_X          186 DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNN  264 (348)
T ss_dssp             CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHH
T ss_pred             cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHH
Confidence            98887777 33322                         1 3445 899999999999999999999753321 111111


Q ss_pred             hhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          186 VKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       186 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ....... .+............         .............+.+++..||+.||++|||+.++++
T Consensus       265 i~~~~~~-~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          265 IRTKNIE-YPLDRNHFLYPLTN---------KKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HTSCCCC-CCCSSSSSTTTTCC-----------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhccCcC-Cccchhhhhccccc---------cccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            1111110 00000000000000         0000000133456889999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.89  E-value=7.2e-24  Score=192.31  Aligned_cols=181  Identities=19%  Similarity=0.235  Sum_probs=115.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....++..||+|.+.                                             
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~   93 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP   93 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence            67999999999999999999998889999999332                                             


Q ss_pred             --------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc---eee-eec-
Q 044875           96 --------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT---THV-EYG-  144 (268)
Q Consensus        96 --------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~---~~i-e~~-  144 (268)
                                                +.....++.+++.||.|||+.+   ++||||||+||+++.+..   .++ +|+ 
T Consensus        94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DFG~  170 (676)
T 3qa8_A           94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGY  170 (676)
T ss_dssp             CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred             EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccccc
Confidence                                      1345678999999999999988   999999999999986543   333 333 


Q ss_pred             -------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccch-hhhc
Q 044875          145 -------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQI-SEVL  198 (268)
Q Consensus       145 -------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~  198 (268)
                                               .+..++.++||||||+++||+++|..||......    ..|......... ....
T Consensus       171 a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~----~~~~~~i~~~~~~~~~~  246 (676)
T 3qa8_A          171 AKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP----VQWHGKVREKSNEHIVV  246 (676)
T ss_dssp             CCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH----HHSSTTCC------CCS
T ss_pred             ccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch----hhhhhhhhcccchhhhh
Confidence                                     2345788999999999999999999999642111    111110000000 0000


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV  252 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~  252 (268)
                      .....+....... .   ..........+..+.+++..||+.||++|||+++++
T Consensus       247 ~~~l~g~~~~~~~-l---p~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL  296 (676)
T 3qa8_A          247 YDDLTGAVKFSSV-L---PTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP  296 (676)
T ss_dssp             CCCCSSSCCCCSS-S---CCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred             hhhhccccccccc-c---CCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence            0000000000000 0   000001113567789999999999999999998855

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.88  E-value=3.1e-23  Score=191.11  Aligned_cols=161  Identities=19%  Similarity=0.377  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecC-CCeEEEEeecCc-------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDP-DQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~-~~~~vavK~l~~-------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.... +++.||+|.+..                                           
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~  159 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG  159 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence            678888999999999999999865 689999994421                                           


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCC------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN------  147 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~------  147 (268)
                                            .....++.+++.||.|||+.+   ++||||||+||+++.+ ..++ ||+...      
T Consensus       160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~~  235 (681)
T 2pzi_A          160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG  235 (681)
T ss_dssp             EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEETTCCS
T ss_pred             EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchhcccCC
Confidence                                  345778999999999999988   9999999999999987 4444 666431      


Q ss_pred             ----------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          148 ----------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       148 ----------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                      .++.++||||||++++|+++|..|+........          +..     .+           
T Consensus       236 ~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~----------~~~-----~~-----------  289 (681)
T 2pzi_A          236 YLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGL----------PED-----DP-----------  289 (681)
T ss_dssp             CCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSC----------CTT-----CH-----------
T ss_pred             ccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCcccccccc----------ccc-----cc-----------
Confidence                            236689999999999999999888764211110          000     00           


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-hHHHHHHHHHhHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-TSDVVNNLQTVKSTL  262 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-~~~v~~~L~~l~~~~  262 (268)
                                 .......+.+++..||+.||++||+ ++++...|.++..+.
T Consensus       290 -----------~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          290 -----------VLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             -----------HHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             -----------ccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence                       0123356788999999999999996 555667777665443

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.75  E-value=1.3e-19  Score=153.14  Aligned_cols=73  Identities=18%  Similarity=0.166  Sum_probs=58.3

Q ss_pred             hhhHHHHHHHHHHHHh-hcCCCCeeecCCCCCccccCCCC--------------------ceee-eeccC----------
Q 044875           99 RLSIAIDVASALEYLH-HHSEKPIVHCDSKPSNILLDNDM--------------------TTHV-EYGMG----------  146 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh-~~~~~~i~h~dlk~~nill~~~~--------------------~~~i-e~~~~----------  146 (268)
                      ...++.|++.||.||| +.+   ++||||||+|||++.+.                    ..++ |||.+          
T Consensus       163 ~~~i~~qi~~aL~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~g  239 (336)
T 2vuw_A          163 AKSILHQLTASLAVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVF  239 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEE
Confidence            4678899999999999 888   99999999999999875                    5555 55543          


Q ss_pred             -----------CCcCccccEeechHH-HHHHHhCCCCCCc
Q 044875          147 -----------NQFSTNGDVYSYGKL-LLEIFTGKRSTSD  174 (268)
Q Consensus       147 -----------~~~~~~~Dv~s~G~v-l~el~tg~~p~~~  174 (268)
                                 +..+.++||||++++ .+++++|..||..
T Consensus       240 t~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~  279 (336)
T 2vuw_A          240 CDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSN  279 (336)
T ss_dssp             CCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHH
T ss_pred             eecccChhhhcCCCccceehhhhhCCCCcccccccCCCcc
Confidence                       123678999998776 6677889888853

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.34  E-value=2e-12  Score=115.84  Aligned_cols=80  Identities=20%  Similarity=0.370  Sum_probs=56.9

Q ss_pred             CcCCcccCCCcceEEEEEecCCCeEEEEeecCc-----------------------------------------------
Q 044875           64 SSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-----------------------------------------------   96 (268)
Q Consensus        64 ~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-----------------------------------------------   96 (268)
                      ...+.||+|+||.||+|..  .+..+++|....                                               
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l  416 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI  416 (540)
T ss_dssp             ---------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred             CCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence            3456899999999999966  467788873211                                               


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCCcC
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFS  150 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~~  150 (268)
                                    .....++.+++.||.|||+.+   ++||||||+||+++.  ..++ ||+.+...+
T Consensus       417 VmE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          417 MMSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             EEECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECC
Confidence                          124688999999999999988   999999999999998  5555 888776544

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.32  E-value=3.7e-12  Score=104.81  Aligned_cols=88  Identities=15%  Similarity=0.144  Sum_probs=72.4

Q ss_pred             HHHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------
Q 044875           55 SLLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        55 ~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------   96 (268)
                      .+......|+..+.||+|+||.||+|.. .+++.+|+|.+..                                      
T Consensus        84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~  162 (282)
T 1zar_A           84 RLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ  162 (282)
T ss_dssp             HHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence            4444455566678999999999999999 6899999997630                                      


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM  145 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~  145 (268)
                                                    .....++.+++.|+.|||+.+   ++||||||+||+++ ++..++ |||.
T Consensus       163 ~~~v~~~~~~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~DFG~  238 (282)
T 1zar_A          163 GLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWIIDFPQ  238 (282)
T ss_dssp             TSSSCCEEEEETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEECCCTT
T ss_pred             CCCcCeEEeccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEEECCC
Confidence                                          224578999999999999988   99999999999999 777776 8887


Q ss_pred             CC
Q 044875          146 GN  147 (268)
Q Consensus       146 ~~  147 (268)
                      +.
T Consensus       239 a~  240 (282)
T 1zar_A          239 SV  240 (282)
T ss_dssp             CE
T ss_pred             Ce
Confidence            64

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.31  E-value=4e-13  Score=120.98  Aligned_cols=71  Identities=21%  Similarity=0.264  Sum_probs=52.8

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccCCCc-----CccccEeechHHHHHHHhCCCCC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQF-----STNGDVYSYGKLLLEIFTGKRST  172 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~~~-----~~~~Dv~s~G~vl~el~tg~~p~  172 (268)
                      ..+|+.||+.||.|+|+.+   |+||||||+|||++.++..|+ |||.+...     ...+++++.+.+..|++.|+.++
T Consensus       341 ~~~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~  417 (569)
T 4azs_A          341 REKILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAENKSW  417 (569)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------
T ss_pred             HHHHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCCCCC
Confidence            3568999999999999999   999999999999999998888 88876432     23345666676777776665443

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.18  E-value=2.6e-11  Score=103.26  Aligned_cols=78  Identities=17%  Similarity=0.174  Sum_probs=63.8

Q ss_pred             HHHHhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------
Q 044875           56 LLKATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        56 l~~~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------   96 (268)
                      +..-..-|+....||.|+||.||+|..+ +|+.||+|.+..                                       
T Consensus        90 L~~rg~iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~  168 (397)
T 4gyi_A           90 HAARKDVYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMK  168 (397)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHH
Confidence            3333344778889999999999999986 789999994321                                       


Q ss_pred             ------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC
Q 044875           97 ------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM  137 (268)
Q Consensus        97 ------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~  137 (268)
                                                          .....+..+++.++.|||..+   ++||||||.|||++.++
T Consensus       169 rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dg  242 (397)
T 4gyi_A          169 ALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEK  242 (397)
T ss_dssp             HHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEE
T ss_pred             HHHhcCCCCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCC
Confidence                                                234578889999999999988   99999999999998765

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.13  E-value=7.2e-11  Score=95.83  Aligned_cols=46  Identities=22%  Similarity=0.244  Sum_probs=37.6

Q ss_pred             hhhHHHHHHHHHHHHh-hcCCCCeeecCCCCCccccCCCCceeeeeccCCC
Q 044875           99 RLSIAIDVASALEYLH-HHSEKPIVHCDSKPSNILLDNDMTTHVEYGMGNQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh-~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~~~  148 (268)
                      ...++.+++.++.||| ..+   ++||||||.|||++. ....+|||.+..
T Consensus       172 ~~~i~~qi~~~l~~lH~~~g---ivHrDlkp~NILl~~-~~~liDFG~a~~  218 (258)
T 1zth_A          172 VEGIFNDVVENVKRLYQEAE---LVHADLSEYNIMYID-KVYFIDMGQAVT  218 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTSC---EECSSCSTTSEEESS-SEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEEcC-cEEEEECccccc
Confidence            4567889999999999 888   999999999999988 333338887643

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.92  E-value=0.0011  Score=53.09  Aligned_cols=34  Identities=9%  Similarity=-0.059  Sum_probs=24.9

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeec
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF   94 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l   94 (268)
                      .-++|.....++.|+++.||+....  +..+++|..
T Consensus        12 ~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~   45 (263)
T 3tm0_A           12 LIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMT   45 (263)
T ss_dssp             HHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEE
T ss_pred             HhccceeEeeccCCCCCeEEEEECC--CCcEEEEeC
Confidence            3356766667788888999998763  577888853

>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}

Probab=96.45  E-value=0.006  Score=34.12  Aligned_cols=34  Identities=12%  Similarity=0.053  Sum_probs=21.1

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 044875            2 SEGLKFMILLLSGLVGLVLVMSRLVINRLRKKRT   35 (268)
Q Consensus         2 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   35 (268)
                      ++.-.|+.+++.|+++++++.+.++++++||+.+
T Consensus         8 s~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~   41 (44)
T 2ks1_B            8 PKIPSIATGMVGALLLLLVVALGIGLFMRRRHIV   41 (44)
T ss_dssp             SCSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence            4556677777777776666666555555554443

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.45  E-value=0.0015  Score=51.88  Aligned_cols=34  Identities=21%  Similarity=0.293  Sum_probs=24.6

Q ss_pred             eeecCCCCCccccCCCCce-eeeeccCCCcCcccc
Q 044875          121 IVHCDSKPSNILLDNDMTT-HVEYGMGNQFSTNGD  154 (268)
Q Consensus       121 i~h~dlk~~nill~~~~~~-~ie~~~~~~~~~~~D  154 (268)
                      ++|+|++|.||+++.+... .+|++.........|
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a~~g~~~~D  220 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRLGVADRYQD  220 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTCEEEETHHH
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhcccCChHHH
Confidence            8999999999999876544 457777654444444

>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}

Probab=96.23  E-value=0.0081  Score=33.52  Aligned_cols=34  Identities=21%  Similarity=0.153  Sum_probs=19.5

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 044875            2 SEGLKFMILLLSGLVGLVLVMSRLVINRLRKKRT   35 (268)
Q Consensus         2 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   35 (268)
                      ++.-.|+.+++.|+++++++.+.++++++||+.+
T Consensus         7 s~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~   40 (44)
T 2l2t_A            7 ARTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK   40 (44)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred             CCcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence            3444566667666666666655555555554443

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.07  E-value=0.0043  Score=52.11  Aligned_cols=37  Identities=19%  Similarity=0.335  Sum_probs=26.0

Q ss_pred             CCeeecCCCCCccccCCCCc---eeeeeccCCCcCccccE
Q 044875          119 KPIVHCDSKPSNILLDNDMT---THVEYGMGNQFSTNGDV  155 (268)
Q Consensus       119 ~~i~h~dlk~~nill~~~~~---~~ie~~~~~~~~~~~Dv  155 (268)
                      ..++|+|+++.||+++.+..   ..+||.....-....|+
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~p~~DL  255 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGHPMGDF  255 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEEECHHHHH
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECccccccCCHHHHH
Confidence            45899999999999987643   34577766544444453

>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A

Probab=95.04  E-value=0.046  Score=30.40  Aligned_cols=26  Identities=19%  Similarity=0.222  Sum_probs=10.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhhc
Q 044875            8 MILLLSGLVGLVLVMSRLVINRLRKK   33 (268)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (268)
                      +.+.++|+++++++.+.++++.+||+
T Consensus        14 Ia~~vVGvll~vi~~l~~~~~~RRR~   39 (44)
T 2jwa_A           14 IISAVVGILLVVVLGVVFGILIKRRQ   39 (44)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHHHHHHHhheehhh
Confidence            44444554433333333333444433

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=92.18  E-value=0.17  Score=40.80  Aligned_cols=29  Identities=17%  Similarity=0.080  Sum_probs=23.7

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEe
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVR   92 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK   92 (268)
                      ......+|.|..+.||+.++. +|+.+.+|
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK   45 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELA-DGTPLFVK   45 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEET-TSCEEEEE
T ss_pred             eEEEEecCCCCCeEEEEEEEC-CCCEEEEE
Confidence            333456899999999999997 78888999

>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}

Probab=90.86  E-value=0.088  Score=28.93  Aligned_cols=15  Identities=27%  Similarity=0.226  Sum_probs=8.3

Q ss_pred             cchhhHHHHHHHHHH
Q 044875            5 LKFMILLLSGLVGLV   19 (268)
Q Consensus         5 ~~i~~~~~~~~~~~~   19 (268)
                      ..|+.+++.|+++++
T Consensus        13 ~~I~~~vv~Gv~ll~   27 (41)
T 2k9y_A           13 LAVIGGVAVGVVLLL   27 (41)
T ss_dssp             THHHHHHHHHHHHHH
T ss_pred             EEEEeehhHHHHHHH
Confidence            345556666666544

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=88.96  E-value=0.86  Score=26.52  Aligned_cols=22  Identities=18%  Similarity=0.294  Sum_probs=11.7

Q ss_pred             cchhhHHHHHHHHHHHHHHHHH
Q 044875            5 LKFMILLLSGLVGLVLVMSRLV   26 (268)
Q Consensus         5 ~~i~~~~~~~~~~~~~~~~~~~   26 (268)
                      +.|+++++.|++++.+++.+++
T Consensus        13 wiIi~svl~GLllL~li~~~Lw   34 (54)
T 2knc_A           13 WWVLVGVLGGLLLLTILVLAMW   34 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            4455555665555555544444

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=88.15  E-value=1.1  Score=25.97  Aligned_cols=23  Identities=22%  Similarity=0.294  Sum_probs=12.5

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHH
Q 044875            4 GLKFMILLLSGLVGLVLVMSRLV   26 (268)
Q Consensus         4 ~~~i~~~~~~~~~~~~~~~~~~~   26 (268)
                      .+.|+++++.|++++.+++.+++
T Consensus         9 ~WiIi~svl~GLLLL~Lii~~Lw   31 (54)
T 2l8s_A            9 LWVILLSAFAGLLLLMLLILALW   31 (54)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH
Confidence            34555666666555555554444

>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}

Probab=88.14  E-value=0.44  Score=28.70  Aligned_cols=30  Identities=10%  Similarity=0.146  Sum_probs=14.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 044875            7 FMILLLSGLVGLVLVMSRLVINRLRKKRTL   36 (268)
Q Consensus         7 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   36 (268)
                      |+++..++++++..++++++..+++|+++.
T Consensus        12 ivlGg~~~lll~~glcI~ccvkcrhRrrqA   41 (70)
T 2klu_A           12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQA   41 (70)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSSCCSSSC
T ss_pred             HHHhHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence            344444544444444444455445444443

>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A

Probab=87.80  E-value=0.73  Score=24.73  Aligned_cols=11  Identities=18%  Similarity=0.096  Sum_probs=4.4

Q ss_pred             HHHHHHHHHHH
Q 044875           10 LLLSGLVGLVL   20 (268)
Q Consensus        10 ~~~~~~~~~~~   20 (268)
                      ++++++++.++
T Consensus        15 GiVvG~v~gv~   25 (38)
T 2k1k_A           15 AVIFGLLLGAA   25 (38)
T ss_dssp             HHHHHHHHHHH
T ss_pred             eeehHHHHHHH
Confidence            34444443333

>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}

Probab=87.76  E-value=0.87  Score=23.46  Aligned_cols=29  Identities=14%  Similarity=0.383  Sum_probs=16.4

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 044875            5 LKFMILLLSGLVGLVLVMSRLVINRLRKK   33 (268)
Q Consensus         5 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   33 (268)
                      +..++.+++|+++++.++..-+.+|+-|+
T Consensus         6 l~malt~i~gl~vif~~lg~tflywrgrr   34 (40)
T 2l9u_A            6 LTMALTVIAGLVVIFMMLGGTFLYWRGRR   34 (40)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCceeEEEcccc
Confidence            45556666666656555555555555433

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=84.23  E-value=0.46  Score=38.50  Aligned_cols=36  Identities=19%  Similarity=0.388  Sum_probs=23.3

Q ss_pred             CCeeecCCCCCccccCCC--Cc-eeeeeccCCCcCcccc
Q 044875          119 KPIVHCDSKPSNILLDND--MT-THVEYGMGNQFSTNGD  154 (268)
Q Consensus       119 ~~i~h~dlk~~nill~~~--~~-~~ie~~~~~~~~~~~D  154 (268)
                      ..++|+|+++.|++++.+  .. ..+|++.....+...|
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~D  229 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDND  229 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHH
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHH
Confidence            347999999999999874  22 2346665543333333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	268
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-16
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	8e-14
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-13
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-12
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-12
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-11
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	4e-11
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-11
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-10
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-10
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	5e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	6e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	7e-10
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-10
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	7e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	8e-10
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-09
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-09
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-09
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	5e-09
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-09
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	8e-09
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	8e-09
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	3e-08
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	6e-08
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	9e-08
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-07
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-07
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-07
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-07
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	1e-06
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-06
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	1e-06
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-06
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	2e-06
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-05
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-05
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	5e-05
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	5e-04
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	0.001
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	0.001
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	0.002

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 2e-16
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 61/202 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F+    + IA   A  ++YLH      I+H D K +NI L  D+T  +            
Sbjct: 101 FEMIKLIDIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRW 157

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL 180
                                     N +S   DVY++G +L E+ TG+   S++     
Sbjct: 158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217

Query: 181 GLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIK 240
            +    +  +   +S+V                           +++  ++     C  K
Sbjct: 218 IIFMVGRGYLSPDLSKVRS----------------------NCPKAMKRLMA---ECLKK 252

Query: 241 SPQERMDTSDVVNNLQTVKSTL 262
              ER     ++ +++ +  +L
Sbjct: 253 KRDERPLFPQILASIELLARSL 274

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 8e-14
 Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 28/103 (27%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---------------- 137
                   ++I V   L YL    +  I+H D KPSNIL+++                  
Sbjct: 101 IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 158

Query: 138 --TTHV--------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
              + V        E   G  +S   D++S G  L+E+  G+ 
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 3e-13
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 35/142 (24%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
                   L +A  +A  + ++        +H D + +NIL+ + ++  +          
Sbjct: 104 IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIE 160

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL 182
                              E      F+   DV+S+G LL EI T  R      T    +
Sbjct: 161 DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220

Query: 183 HNFVK---MAVPDQISEVLDPL 201
            N  +   M  PD   E L  L
Sbjct: 221 QNLERGYRMVRPDNCPEELYQL 242

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.2 bits (156), Expect = 1e-12
 Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 30/137 (21%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
             F      +   ++A+AL Y H    K ++H D KP N+LL +     +          
Sbjct: 101 SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 157

Query: 142 ----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR-STSDMFTEGLGLHN 184
                           E   G       D++S G L  E   GK    ++ + E     +
Sbjct: 158 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 217

Query: 185 FVKMAVPDQISEVLDPL 201
            V+   PD ++E    L
Sbjct: 218 RVEFTFPDFVTEGARDL 234

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 5e-12
 Identities = 35/188 (18%), Positives = 58/188 (30%), Gaps = 57/188 (30%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------------- 138
             L  ++DV  A+EYL  +     VH D    N+L+  D                     
Sbjct: 104 CLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 160

Query: 139 ------THVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD 192
                 T  E     +FST  DV+S+G LL EI++  R    +    + L + V      
Sbjct: 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR----VPYPRIPLKDVVPRVEKG 216

Query: 193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVV 252
              +  D                          ++  ++K    C       R     + 
Sbjct: 217 YKMDAPD----------------------GCPPAVYEVMKN---CWHLDAAMRPSFLQLR 251

Query: 253 NNLQTVKS 260
             L+ +K+
Sbjct: 252 EQLEHIKT 259

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.3 bits (151), Expect = 5e-12
 Identities = 24/133 (18%), Positives = 40/133 (30%), Gaps = 27/133 (20%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM---------------- 137
            K     S    +   L++LH  +  PI+H D K  NI +                    
Sbjct: 109 MKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 167

Query: 138 -TTHVEYG---------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK 187
                  G            ++  + DVY++G  +LE+ T +   S+             
Sbjct: 168 SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 227

Query: 188 MAVPDQISEVLDP 200
              P    +V  P
Sbjct: 228 GVKPASFDKVAIP 240

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.6 bits (151), Expect = 5e-12
 Identities = 40/193 (20%), Positives = 62/193 (32%), Gaps = 62/193 (32%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                +L IA  VA+ + YL        VH D    N L+  +M   +            
Sbjct: 137 LSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 193

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH 183
                             E    N+++T  DV++YG +L EIF+             GL 
Sbjct: 194 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY------------GLQ 241

Query: 184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQ 243
            +  MA  + I  V D   +A  E                   L  ++++   C  K P 
Sbjct: 242 PYYGMAHEEVIYYVRDGNILACPEN--------------CPLELYNLMRL---CWSKLPA 284

Query: 244 ERMDTSDVVNNLQ 256
           +R     +   LQ
Sbjct: 285 DRPSFCSIHRILQ 297

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 37/209 (17%), Positives = 64/209 (30%), Gaps = 61/209 (29%)

Query: 77  VCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
           + KG L       + +  +    + +A  +AS + Y+        VH D + +NIL+  +
Sbjct: 93  MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGEN 149

Query: 137 MTTHV-----------------------------EYGMGNQFSTNGDVYSYGKLLLEIFT 167
           +   V                             E  +  +F+   DV+S+G LL E+ T
Sbjct: 150 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 209

Query: 168 GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL 227
             R                   V DQ+                           +  ESL
Sbjct: 210 KGRVPYPGMVN---------REVLDQVERGYRMPCPP-----------------ECPESL 243

Query: 228 ITILKIRVVCSIKSPQERMDTSDVVNNLQ 256
             ++     C  K P+ER     +   L+
Sbjct: 244 HDLMC---QCWRKEPEERPTFEYLQAFLE 269

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 2e-11
 Identities = 22/137 (16%), Positives = 36/137 (26%), Gaps = 33/137 (24%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 L  A  VA  +E+L        VH D    N+L+ +     +            
Sbjct: 161 LTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSD 217

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH 183
                             E      ++   DV+SYG LL EIF+   +           +
Sbjct: 218 SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFY 277

Query: 184 NFVKMAVPDQISEVLDP 200
             ++             
Sbjct: 278 KLIQNGFKMDQPFYATE 294

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (144), Expect = 3e-11
 Identities = 19/107 (17%), Positives = 33/107 (30%), Gaps = 30/107 (28%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSE--KPIVHCDSKPSNILLDNDMTTHV---------- 141
                 L +   +  AL+  H  S+    ++H D KP+N+ LD      +          
Sbjct: 106 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN 165

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                             E      ++   D++S G LL E+     
Sbjct: 166 HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 212

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.0 bits (145), Expect = 4e-11
 Identities = 24/138 (17%), Positives = 40/138 (28%), Gaps = 31/138 (22%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------- 138
           +  +     ++       L YLH H+   ++H D K  NILL                  
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166

Query: 139 --------------THVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN 184
                           +      Q+    DV+S G   +E+   K    +M      L++
Sbjct: 167 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYH 225

Query: 185 FVKMAVPDQISEVLDPLF 202
             +   P   S      F
Sbjct: 226 IAQNESPALQSGHWSEYF 243

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (142), Expect = 8e-11
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 35/136 (25%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND--------------------M 137
              ++  +   ALE+LH +    ++H D K  NILL  D                     
Sbjct: 117 QIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR 173

Query: 138 TTHV--------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR----STSDMFTEGLGLHNF 185
           +T V        E      +    D++S G + +E+  G+              +  +  
Sbjct: 174 STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233

Query: 186 VKMAVPDQISEVLDPL 201
            ++  P+++S +    
Sbjct: 234 PELQNPEKLSAIFRDF 249

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.5 bits (141), Expect = 9e-11
 Identities = 21/138 (15%), Positives = 36/138 (26%), Gaps = 34/138 (24%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----------------- 136
                       + + + YLH      I H D KP N+LLD                   
Sbjct: 100 MPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156

Query: 137 -----MTTHV--------EYGMGNQFSTNG-DVYSYGKLLLEIFTGKRSTSDMFTEGLGL 182
                +            E     +F     DV+S G +L  +  G+             
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216

Query: 183 HNFVKMAVPDQISEVLDP 200
            ++ +        + +D 
Sbjct: 217 SDWKEKKTYLNPWKKIDS 234

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 1e-10
 Identities = 30/193 (15%), Positives = 49/193 (25%), Gaps = 61/193 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 LS +  VA  + +L        +H D    NILL +   T +            
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKND 198

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH 183
                             E      ++   DV+SYG  L E+F+   S           +
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258

Query: 184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQ 243
             +K        E                              +  I+K    C    P 
Sbjct: 259 KMIKEGFRMLSPEHAPA-------------------------EMYDIMK---TCWDADPL 290

Query: 244 ERMDTSDVVNNLQ 256
           +R     +V  ++
Sbjct: 291 KRPTFKQIVQLIE 303

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (140), Expect = 2e-10
 Identities = 31/205 (15%), Positives = 59/205 (28%), Gaps = 64/205 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +      +   + VA  +++L        VH D    N +LD   T  V          
Sbjct: 125 HNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 181

Query: 142 ----------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG 179
                                 E     +F+T  DV+S+G LL E+ T            
Sbjct: 182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA----PPYPD 237

Query: 180 LGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSI 239
           +   +     +  +   +L P +                      + L  ++     C  
Sbjct: 238 VNTFDITVYLLQGR--RLLQPEYCP--------------------DPLYEVMLK---CWH 272

Query: 240 KSPQERMDTSDVVNNLQTVKSTLLR 264
              + R   S++V+ +  + ST + 
Sbjct: 273 PKAEMRPSFSELVSRISAIFSTFIG 297

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 61/193 (31%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------- 141
           T L + +DV   +    +  E  ++H D    N L+  +    V                
Sbjct: 102 TLLGMCLDVCEGM---AYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 158

Query: 142 -------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM 188
                        E    +++S+  DV+S+G L+ E+F+  +   +  +           
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN---------S 209

Query: 189 AVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDT 248
            V + IS                    + +                  C  + P++R   
Sbjct: 210 EVVEDISTGFRLYK----PRLASTHVYQIMNH----------------CWKERPEDRPAF 249

Query: 249 SDVVNNLQTVKST 261
           S ++  L  +  +
Sbjct: 250 SRLLRQLAEIAES 262

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 17/106 (16%), Positives = 29/106 (27%), Gaps = 32/106 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 +     V   L ++H ++    VH D KP NI+     +  +            
Sbjct: 121 MSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 177

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                            E   G       D++S G L   + +G  
Sbjct: 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS 223

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (136), Expect = 5e-10
 Identities = 22/112 (19%), Positives = 30/112 (26%), Gaps = 36/112 (32%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------- 138
           R         +      AL YLH   +  I+H D K  NIL   D               
Sbjct: 105 RPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT 161

Query: 139 ---------------THVEYGMGNQ-----FSTNGDVYSYGKLLLEIFTGKR 170
                             E  M        +    DV+S G  L+E+   + 
Sbjct: 162 RTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 213

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 6e-10
 Identities = 29/189 (15%), Positives = 55/189 (29%), Gaps = 34/189 (17%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
                 T   +   +   L++LH H    +VH D KP NIL+ +     +          
Sbjct: 111 PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 167

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN 184
                            E  + + ++T  D++S G +  E+F  K               
Sbjct: 168 FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKI 227

Query: 185 FVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE 244
              + +P +     D                E       +     +LK    C   +P +
Sbjct: 228 LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK----CLTFNPAK 283

Query: 245 RMDTSDVVN 253
           R+     ++
Sbjct: 284 RISAYSALS 292

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 7e-10
 Identities = 27/135 (20%), Positives = 44/135 (32%), Gaps = 30/135 (22%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 L  A DVA  ++YL    +K  +H D    NIL+  +    +            
Sbjct: 124 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY 180

Query: 142 ---------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFV 186
                          E    + ++TN DV+SYG LL EI +   +     T         
Sbjct: 181 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 240

Query: 187 KMAVPDQISEVLDPL 201
           +    ++     D +
Sbjct: 241 QGYRLEKPLNCDDEV 255

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 7e-10
 Identities = 29/211 (13%), Positives = 52/211 (24%), Gaps = 52/211 (24%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHH-----SEKPIVHCDSKPSNILLDNDMTTHV----- 141
                   + +A+  AS L +LH        +  I H D K  NIL+  + T  +     
Sbjct: 95  YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154

Query: 142 ---------------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTG 168
                                                  +     D+Y+ G +  EI   
Sbjct: 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR 214

Query: 169 KRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLI 228
                           +  +   D   E +  +                  + Q  E+L 
Sbjct: 215 CSIGGIHEDYQ---LPYYDLVPSDPSVEEMRKVVCEQKLR------PNIPNRWQSCEALR 265

Query: 229 TILKIRVVCSIKSPQERMDTSDVVNNLQTVK 259
            + KI   C   +   R+    +   L  + 
Sbjct: 266 VMAKIMRECWYANGAARLTALRIKKTLSQLS 296

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.0 bits (134), Expect = 7e-10
 Identities = 27/138 (19%), Positives = 40/138 (28%), Gaps = 33/138 (23%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 +S A  VA  +EYL        +H D    N+L+  D    +            
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH 183
                             E      ++   DV+S+G LL EIFT   S            
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248

Query: 184 NFVKMAVPDQISEVLDPL 201
              +    D+ S   + L
Sbjct: 249 LLKEGHRMDKPSNCTNEL 266

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.9 bits (134), Expect = 8e-10
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 71/195 (36%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------- 141
             + +   +A+ ++YL        VH D    NIL+++++   V                
Sbjct: 129 QLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP 185

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGL--G 181
                            E     +F++  DV+SYG ++ E+ + G+R   DM  + +   
Sbjct: 186 TYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINA 245

Query: 182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKS 241
           +    ++  P      L  L                            +L     C  K 
Sbjct: 246 IEQDYRLPPPMDCPSALHQL----------------------------MLD----CWQKD 273

Query: 242 PQERMDTSDVVNNLQ 256
              R     +VN L 
Sbjct: 274 RNHRPKFGQIVNTLD 288

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 15/97 (15%)

Query: 52  SYESLLKATGGFSSA---------NIIGAGSFGSVCKGILDPD---QTVVSVRDFKPCTR 99
           ++E   +A   F+            +IGAG FG VC G L      +  V+++  K    
Sbjct: 8   TFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT 67

Query: 100 LSIAIDV---ASALEYLHHHSEKPIVHCDSKPSNILL 133
                D    AS +    H +   +    +K + +++
Sbjct: 68  EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMI 104

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.1 bits (132), Expect = 2e-09
 Identities = 31/135 (22%), Positives = 47/135 (34%), Gaps = 31/135 (22%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F        A +V  ALEYLH    K I++ D KP NILLD +    +            
Sbjct: 101 FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV 157

Query: 142 -------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM 188
                        E      ++ + D +S+G L+ E+  G     D  T        +  
Sbjct: 158 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT-YEKILNA 216

Query: 189 AV--PDQISEVLDPL 201
            +  P   +E +  L
Sbjct: 217 ELRFPPFFNEDVKDL 231

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.1 bits (132), Expect = 2e-09
 Identities = 30/201 (14%), Positives = 53/201 (26%), Gaps = 69/201 (34%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVE--------------- 142
               +   V+  ++YL        VH D    N+LL N     +                
Sbjct: 110 NVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 166

Query: 143 ----------------YGMGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGL--GLH 183
                                +FS+  DV+SYG  + E  + G++    M    +   + 
Sbjct: 167 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE 226

Query: 184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQ 243
              +M  P +    L  L                            +      C I   +
Sbjct: 227 QGKRMECPPECPPELYAL----------------------------MSD----CWIYKWE 254

Query: 244 ERMDTSDVVNNLQTVKSTLLR 264
           +R D   V   ++    +L  
Sbjct: 255 DRPDFLTVEQRMRACYYSLAS 275

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 54.3 bits (130), Expect = 2e-09
 Identities = 33/196 (16%), Positives = 61/196 (31%), Gaps = 61/196 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           ++      L +A  ++SA+EYL        +H D    N L+  +    V          
Sbjct: 110 QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMT 166

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL 182
                              E    N+FS   DV+++G LL EI T           G+ L
Sbjct: 167 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM----SPYPGIDL 222

Query: 183 HNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSP 242
               ++   D   E  +                         E +  +++    C   +P
Sbjct: 223 SQVYELLEKDYRMERPE----------------------GCPEKVYELMR---ACWQWNP 257

Query: 243 QERMDTSDVVNNLQTV 258
            +R   +++    +T+
Sbjct: 258 SDRPSFAEIHQAFETM 273

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 3e-09
 Identities = 31/215 (14%), Positives = 65/215 (30%), Gaps = 62/215 (28%)

Query: 72  GSFGSVCKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNI 131
           G   S  + +         +        + +A ++A  + YL+ +     VH D    N 
Sbjct: 108 GDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNC 164

Query: 132 LLDNDMTTHV------------------------------EYGMGNQFSTNGDVYSYGKL 161
           ++  D T  +                              E      F+T  DV+S+G +
Sbjct: 165 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 224

Query: 162 LLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKG 221
           L EI T         +    L   ++  + D+     D LF                   
Sbjct: 225 LWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLF------------------- 265

Query: 222 QIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQ 256
                     ++  +C   +P+ R    +++++++
Sbjct: 266 ----------ELMRMCWQYNPKMRPSFLEIISSIK 290

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 5e-09
 Identities = 24/196 (12%), Positives = 56/196 (28%), Gaps = 63/196 (32%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +F     + +   +A+ ++YL +      VH D    NIL+++++   V          
Sbjct: 105 GEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 161

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGL 180
                                E     +F++  DV+S+G ++ E+ T         +   
Sbjct: 162 DDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE 221

Query: 181 GLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIK 240
            +             +    +                              ++ + C  +
Sbjct: 222 VMKAINDGFRLPTPMDCPSAI-----------------------------YQLMMQCWQQ 252

Query: 241 SPQERMDTSDVVNNLQ 256
               R   +D+V+ L 
Sbjct: 253 ERARRPKFADIVSILD 268

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 53.5 bits (128), Expect = 5e-09
 Identities = 18/106 (16%), Positives = 31/106 (29%), Gaps = 32/106 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                 ++        L+++H HS   IVH D KP NI+ +    + V            
Sbjct: 124 MSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLN 180

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                            E           D+++ G L   + +G  
Sbjct: 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 226

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 5e-09
 Identities = 32/192 (16%), Positives = 61/192 (31%), Gaps = 61/192 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F+    L +  DV  A+EYL        +H D    N L+++     V            
Sbjct: 97  FQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN 184
                            E  M ++FS+  D++++G L+ EI++  +   + FT       
Sbjct: 154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN------ 207

Query: 185 FVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQE 244
                  + I++ L         E+                    +  I   C  +   E
Sbjct: 208 ---SETAEHIAQGLRLYRPHLASEK--------------------VYTIMYSCWHEKADE 244

Query: 245 RMDTSDVVNNLQ 256
           R     +++N+ 
Sbjct: 245 RPTFKILLSNIL 256

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.2 bits (127), Expect = 6e-09
 Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 34/110 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           R  K    + +   V+  ++YL        VH D    N+LL       +          
Sbjct: 102 RHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALR 158

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                                E     +FS+  DV+S+G L+ E F+  +
Sbjct: 159 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 208

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.0 bits (126), Expect = 8e-09
 Identities = 32/189 (16%), Positives = 51/189 (26%), Gaps = 61/189 (32%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------- 141
             +  +  VA  +E+L        +H D    NILL       +                
Sbjct: 135 HLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 191

Query: 142 --------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVK 187
                         E      ++   DV+S+G LL EIF+   S              +K
Sbjct: 192 RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK 251

Query: 188 MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD 247
                +  +   P                        E   T+L     C    P +R  
Sbjct: 252 EGTRMRAPDYTTP------------------------EMYQTMLD----CWHGEPSQRPT 283

Query: 248 TSDVVNNLQ 256
            S++V +L 
Sbjct: 284 FSELVEHLG 292

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 8e-09
 Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 33/103 (32%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------- 141
             L+  + +A  + YL       +VH D    N+L+       +                
Sbjct: 112 YLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 168

Query: 142 --------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                         E  +   ++   DV+SYG  + E+ T   
Sbjct: 169 HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.3 bits (122), Expect = 3e-08
 Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 29/134 (21%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F        A  +    EYLH      +++ D KP N+L+D      V            
Sbjct: 138 FSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194

Query: 142 -------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRS-TSDMFTEGLGLHNFVK 187
                        E  +   ++   D ++ G L+ E+  G     +D   +        K
Sbjct: 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254

Query: 188 MAVPDQISEVLDPL 201
           +  P   S  L  L
Sbjct: 255 VRFPSHFSSDLKDL 268

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 4e-08
 Identities = 19/110 (17%), Positives = 33/110 (30%), Gaps = 30/110 (27%)

Query: 91  VRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV--------- 141
           +R              A  +  L +   K I+H D KP NILL+ DM   +         
Sbjct: 99  IRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                                E         + D+++ G ++ ++  G  
Sbjct: 159 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 208

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (120), Expect = 6e-08
 Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 32/108 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +      +S    V  AL++LH H    I H D +P NI+     ++ +          
Sbjct: 97  FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQ 153

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                              E    +  ST  D++S G L+  + +G  
Sbjct: 154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 50.1 bits (119), Expect = 9e-08
 Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 30/130 (23%)

Query: 98  TRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT------------------- 138
                A ++   LE++H+     +V+ D KP+NILLD                       
Sbjct: 108 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 164

Query: 139 --------THVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV 190
                          G  + ++ D +S G +L ++  G        T+     + + + +
Sbjct: 165 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM 224

Query: 191 PDQISEVLDP 200
             ++ +   P
Sbjct: 225 AVELPDSFSP 234

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 1e-07
 Identities = 27/197 (13%), Positives = 50/197 (25%), Gaps = 67/197 (34%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT--------------- 138
               + +  A  +++AL YL     K  VH D    N+L+ ++                 
Sbjct: 105 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 161

Query: 139 --------------THVEYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHN 184
                            E     +F++  DV+ +G  + EI                +  
Sbjct: 162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR 221

Query: 185 FVK---MAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKS 241
                 + +P      L  L                + K                C    
Sbjct: 222 IENGERLPMPPNCPPTLYSL----------------MTK----------------CWAYD 249

Query: 242 PQERMDTSDVVNNLQTV 258
           P  R   +++   L T+
Sbjct: 250 PSRRPRFTELKAQLSTI 266

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 20/109 (18%), Positives = 30/109 (27%), Gaps = 36/109 (33%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
                   I   +   +  LH      IVH D KP NILLD+DM   +            
Sbjct: 107 LSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 163

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                       +    D++S G ++  +  G 
Sbjct: 164 EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 31/107 (28%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
             F        A ++   L++LH      IV+ D K  NILLD D    +          
Sbjct: 98  HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENM 154

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                             E  +G +++ + D +S+G LL E+  G+ 
Sbjct: 155 LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 201

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 17/124 (13%), Positives = 35/124 (28%), Gaps = 43/124 (34%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH----------- 140
           R F   T    A  + + ++ +H  S   +V+ D KP N L+    + +           
Sbjct: 96  RKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGM 152

Query: 141 -----------------------------VEYGMGNQFSTNGDVYSYGKLLLEIFTGKRS 171
                                        +   +G + S   D+ + G + +    G   
Sbjct: 153 VKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 212

Query: 172 TSDM 175
              +
Sbjct: 213 WQGL 216

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.2 bits (114), Expect = 3e-07
 Identities = 27/190 (14%), Positives = 53/190 (27%), Gaps = 36/190 (18%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTH------------- 140
                       +  +L Y+H      I H D KP N+LLD D                 
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 175

Query: 141 ----------------VEYGMGNQFSTNGDVYSYGKLLLEIFTGKRS-TSDMFTEGLGLH 183
                                   ++++ DV+S G +L E+  G+     D   + L   
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235

Query: 184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQ 243
             V      +    ++P +      + +      + + +     I +          +P 
Sbjct: 236 IKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCS---RLLEYTPT 292

Query: 244 ERMDTSDVVN 253
            R+   +   
Sbjct: 293 ARLTPLEACA 302

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 6e-07
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 33/107 (30%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
           F       I   +  A++YLH  +   I H D KP N+L  +     +            
Sbjct: 108 FTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKET 164

Query: 142 ------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                             E     ++  + D++S G ++  +  G  
Sbjct: 165 TSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP 211

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 32/108 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT-HVEYGMGNQFS 150
                    S    +   L + H H    ++H D KP N+L++ +      ++G+   F 
Sbjct: 97  TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFG 153

Query: 151 TNG----------------------------DVYSYGKLLLEIFTGKR 170
                                          D++S G +  E+ T + 
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 201

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.1 bits (108), Expect = 1e-06
 Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 32/108 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            D  P    S    +   L + H      ++H D KP N+L++ +    +          
Sbjct: 96  GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFG 152

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                                     +ST+ D++S G +  E+    R
Sbjct: 153 IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 20/107 (18%), Positives = 33/107 (30%), Gaps = 32/107 (29%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
               P    +  +     LEYLH H    I+H D KP+N+LLD +    +          
Sbjct: 95  LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSFG 151

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                     +    D+++ G +L E+    
Sbjct: 152 SPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRV 198

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 45.9 bits (108), Expect = 1e-06
 Identities = 24/108 (22%), Positives = 36/108 (33%), Gaps = 34/108 (31%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------ 141
             P   + +  D   AL + H +    I+H D KP+NI++       V            
Sbjct: 108 MTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 164

Query: 142 -------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                              E   G+      DVYS G +L E+ TG+ 
Sbjct: 165 GNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEP 212

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 27/143 (18%), Positives = 40/143 (27%), Gaps = 38/143 (26%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----------------- 136
           F   T    A+ VA  + YL        +H D    N+LL                    
Sbjct: 108 FLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 164

Query: 137 -----MTTHV---------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGL 182
                M  H          E      FS   D + +G  L E+FT  +           L
Sbjct: 165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224

Query: 183 HNFVK----MAVPDQISEVLDPL 201
           H   K    +  P+   + +  +
Sbjct: 225 HKIDKEGERLPRPEDCPQDIYNV 247

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.6 bits (107), Expect = 2e-06
 Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 41/125 (32%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           R F   T L +A  + S +EY+H  +    +H D KP N L+      ++          
Sbjct: 98  RKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154

Query: 142 ----------------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTS 173
                                          +G + S   D+ S G +L+    G     
Sbjct: 155 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214

Query: 174 DMFTE 178
            +   
Sbjct: 215 GLKAA 219

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.1 bits (106), Expect = 3e-06
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 31/121 (25%)

Query: 78  CKGILDPDQTVVSVRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND- 136
            + + D    +      +     S    V  A+ + H      ++H D K  NIL+D + 
Sbjct: 91  PEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNR 147

Query: 137 ------------------MTTHV--------EYGMGNQFSTNG-DVYSYGKLLLEIFTGK 169
                              T           E+   +++      V+S G LL ++  G 
Sbjct: 148 GELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD 207

Query: 170 R 170
            
Sbjct: 208 I 208

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 31/111 (27%)

Query: 91  VRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-------------- 136
           +   +  T   + I V   +  L H  +  I++ D K  NILLD++              
Sbjct: 120 LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 179

Query: 137 -----------------MTTHVEYGMGNQFSTNGDVYSYGKLLLEIFTGKR 170
                            M   +  G  +      D +S G L+ E+ TG  
Sbjct: 180 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGAS 230

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 1e-05
 Identities = 16/110 (14%), Positives = 34/110 (30%), Gaps = 35/110 (31%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           +             +   L+Y+H      ++H D KPSN+LL+      +          
Sbjct: 104 QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 160

Query: 142 ----------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                        ++ + D++S G +L E+ + +
Sbjct: 161 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 210

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.5 bits (101), Expect = 1e-05
 Identities = 20/109 (18%), Positives = 35/109 (32%), Gaps = 33/109 (30%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           R         I+  +   L+Y+H      I+H D KP N+L++   +             
Sbjct: 120 RGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLIQIKIADLG 177

Query: 142 ---------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                E  +G  +    D++S   L+ E+ TG 
Sbjct: 178 NACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGD 226

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 20/102 (19%), Positives = 36/102 (35%), Gaps = 29/102 (28%)

Query: 94  FKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND----------------- 136
                   +   +   L Y+H      I+H D KP N+ ++ D                 
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174

Query: 137 MTTHV---------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
           MT +V               +++   D++S G ++ E+ TGK
Sbjct: 175 MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 216

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 5e-05
 Identities = 17/108 (15%), Positives = 32/108 (29%), Gaps = 28/108 (25%)

Query: 91  VRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM------------- 137
           +   +  T        A  +  L +   + +V+ D K  N++LD D              
Sbjct: 96  LSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 155

Query: 138 -----TTHVEYG----------MGNQFSTNGDVYSYGKLLLEIFTGKR 170
                T     G            N +    D +  G ++ E+  G+ 
Sbjct: 156 ISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 40.1 bits (93), Expect = 8e-05
 Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 3/46 (6%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM 137
              +      +   +   +   +H     IVH D    N+L+  + 
Sbjct: 98  YRVRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVSEEG 140

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 40.3 bits (93), Expect = 1e-04
 Identities = 14/104 (13%), Positives = 34/104 (32%), Gaps = 29/104 (27%)

Query: 95  KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV------------- 141
                ++    +   L  + +  ++ ++H D KP N+L++ +    +             
Sbjct: 95  GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154

Query: 142 ----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                 ++ST  D++S G +  E+  G 
Sbjct: 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGT 198

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.1 bits (90), Expect = 3e-04
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 91  VRDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND 136
            +            ++  AL+Y H      I+H D KP N+++D++
Sbjct: 123 YQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHE 165

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 5e-04
 Identities = 18/109 (16%), Positives = 35/109 (32%), Gaps = 33/109 (30%)

Query: 95  KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMGNQFSTNG 153
              T   I   +   L  L++     I+H D K +N+L+  D    + ++G+   FS   
Sbjct: 112 VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 171

Query: 154 --------------------------------DVYSYGKLLLEIFTGKR 170
                                           D++  G ++ E++T   
Sbjct: 172 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSP 220

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 14/91 (15%), Positives = 24/91 (26%), Gaps = 31/91 (34%)

Query: 110 LEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------------------------- 141
           L  +++     I H D KP NI+L +                                  
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182

Query: 142 ---EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
              E           D++S G +   + +G 
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGA 213

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (86), Expect = 0.001
 Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 29/104 (27%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
           +         +   +   L+Y+H      I+H D KPSN+ ++ D    +          
Sbjct: 116 QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTD 172

Query: 142 ----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                                  ++   D++S G ++ E+ TG+
Sbjct: 173 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 30/105 (28%)

Query: 92  RDFKPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV---------- 141
            +        +   +   +++LH      I+H D KPSNI++ +D T  +          
Sbjct: 114 MELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170

Query: 142 -----------------EYGMGNQFSTNGDVYSYGKLLLEIFTGK 169
                            E  +G  +  N D++S G ++ E+   K
Sbjct: 171 TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	268
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.98
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.98
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.98
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.98
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.98
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.96
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.96
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.96
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.94
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.67
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	87.27
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	81.89
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	81.0

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-37  Score=254.16  Aligned_cols=170  Identities=28%  Similarity=0.480  Sum_probs=131.0

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||+||+|++.   ..||||.+..                                           
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEeccEEEEEEe
Confidence            467888899999999999999874   2599994432                                           


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.|+++||+|||+.+   ++||||||+|||++.++..|+ |||.+         
T Consensus        84 y~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~  160 (276)
T d1uwha_          84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS  160 (276)
T ss_dssp             CCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC-------
T ss_pred             cCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccCCc
Confidence                                456889999999999999988   999999999999999998888 55532         


Q ss_pred             -----------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-ccchhhhcchhh
Q 044875          147 -----------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PDQISEVLDPLF  202 (268)
Q Consensus       147 -----------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~  202 (268)
                                             ..|+.++|||||||++||++||+.||.+...... +........ ++...+.     
T Consensus       161 ~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~-~~~~~~~~~~~p~~~~~-----  234 (276)
T d1uwha_         161 HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ-IIFMVGRGYLSPDLSKV-----  234 (276)
T ss_dssp             -----CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTSCCCCGGGS-----
T ss_pred             ccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH-HHHHHhcCCCCCcchhc-----
Confidence                                   2367899999999999999999999986432211 112222111 1111110     


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                          ..+++..+.+++..||+.||++||||++|++.|+.+.+.
T Consensus       235 --------------------~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         235 --------------------RSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             --------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             --------------------cccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence                                014456788999999999999999999999999988764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.8e-37  Score=254.14  Aligned_cols=177  Identities=25%  Similarity=0.468  Sum_probs=132.1

Q ss_pred             cCHHHHHHHhCCCC---------cCCcccCCCcceEEEEEecCCCe---EEEEeecC-----------------------
Q 044875           51 ISYESLLKATGGFS---------SANIIGAGSFGSVCKGILDPDQT---VVSVRDFK-----------------------   95 (268)
Q Consensus        51 ~~~~~l~~~~~~f~---------~~~~lG~G~fg~Vy~g~~~~~~~---~vavK~l~-----------------------   95 (268)
                      ++|+++..++.+|+         ..+.||+|+||+||+|.+..++.   .||||.+.                       
T Consensus         7 ~t~~d~~~a~~~f~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H   86 (299)
T d1jpaa_           7 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDH   86 (299)
T ss_dssp             GGSSSHHHHHHHHSCBCCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCC
T ss_pred             CCHHHHHHHHhhhchhhChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCC
Confidence            46667777765554         34689999999999999865543   68898432                       


Q ss_pred             ----------------------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC
Q 044875           96 ----------------------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN  135 (268)
Q Consensus        96 ----------------------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~  135 (268)
                                                              +.....++.|++.||.|||+.+   ++||||||+|||++.
T Consensus        87 pnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~  163 (299)
T d1jpaa_          87 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNS  163 (299)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECT
T ss_pred             CCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECC
Confidence                                                    2457889999999999999988   999999999999999


Q ss_pred             CCceee-eeccC--------------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccc
Q 044875          136 DMTTHV-EYGMG--------------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLG  181 (268)
Q Consensus       136 ~~~~~i-e~~~~--------------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~  181 (268)
                      ++.+|+ |||.+                                ..++.++|||||||++||++| |+.||.+....  .
T Consensus       164 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~  241 (299)
T d1jpaa_         164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--D  241 (299)
T ss_dssp             TCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--H
T ss_pred             CCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--H
Confidence            999888 55532                                346788999999999999998 89999764322  1


Q ss_pred             hhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          182 LHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       182 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      +...+.......            .                +.+++..+.+++.+||+.||++||||.+|++.|+++.+
T Consensus       242 ~~~~i~~~~~~~------------~----------------~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         242 VINAIEQDYRLP------------P----------------PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHTTCCCC------------C----------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCC------------C----------------CccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            222221111100            0                01345668899999999999999999999999998765

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.1e-37  Score=252.12  Aligned_cols=169  Identities=22%  Similarity=0.372  Sum_probs=130.7

Q ss_pred             HhCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------
Q 044875           59 ATGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        59 ~~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------   96 (268)
                      ..++|...+.||+|+||+||+|.+..+++.||||.+..                                          
T Consensus        15 ~~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~   94 (287)
T d1opja_          15 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF   94 (287)
T ss_dssp             CGGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             cHHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeec
Confidence            34567777899999999999999988899999995533                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          ..+..++.|++.||.|||+.+   ++||||||+|||++.++..|+ |||.+         
T Consensus        95 ~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~  171 (287)
T d1opja_          95 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT  171 (287)
T ss_dssp             CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE
T ss_pred             ccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCCCce
Confidence                                356789999999999999988   999999999999999998888 56543         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                         ..|+.++|||||||++||+++|..|+...... ..+.+..........+            
T Consensus       172 ~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~-~~~~~~i~~~~~~~~~------------  238 (287)
T d1opja_         172 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-SQVYELLEKDYRMERP------------  238 (287)
T ss_dssp             EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCC------------
T ss_pred             eeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchH-HHHHHHHhcCCCCCCC------------
Confidence                               45788999999999999999976665432111 1122222221111100            


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                      ..++.++.+++..||+.||++|||+++|++.|+.+.
T Consensus       239 ----------------~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         239 ----------------EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             ----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ----------------ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence                            133456889999999999999999999999998764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-36  Score=244.11  Aligned_cols=167  Identities=22%  Similarity=0.387  Sum_probs=127.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||+||+|.+. ++..||||.+..                                            
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~   83 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME   83 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCT
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecC
Confidence            46777788999999999999997 678899995443                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-------------  145 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-------------  145 (268)
                                       ..+..++.|++.||.|||+.+   ++||||||+||+++.++..|+ |||.             
T Consensus        84 ~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~  160 (263)
T d1sm2a_          84 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST  160 (263)
T ss_dssp             TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC--------------
T ss_pred             CCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCCceeec
Confidence                             456789999999999999988   999999999999999988888 3443             


Q ss_pred             ---------------CCCcCccccEeechHHHHHHHhC-CCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          146 ---------------GNQFSTNGDVYSYGKLLLEIFTG-KRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       146 ---------------~~~~~~~~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                     ...++.++|||||||++||++|+ .+|+.... . ..+............+              
T Consensus       161 ~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-~-~~~~~~i~~~~~~~~p--------------  224 (263)
T d1sm2a_         161 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-N-SEVVEDISTGFRLYKP--------------  224 (263)
T ss_dssp             ----CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-H-HHHHHHHHHTCCCCCC--------------
T ss_pred             ceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-H-HHHHHHHHhcCCCCCc--------------
Confidence                           24578899999999999999995 55554321 1 1111222211111100              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                    ..++.++.+++..||+.||++||||++|++.|+++.+.
T Consensus       225 --------------~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         225 --------------RLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             --------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------------cccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence                          13345688999999999999999999999999998763

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-35  Score=243.33  Aligned_cols=168  Identities=21%  Similarity=0.399  Sum_probs=126.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCC----eEEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQ----TVVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~----~~vavK~l~~----------------------------------------   96 (268)
                      +.|+..+.||+|+||.||+|.+..++    ..||||.+..                                        
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~   86 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI   86 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEE
Confidence            45677789999999999999986444    4799995432                                        


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             ..+..++.+++.|+.|||+.+   ++||||||+|||++.++.+|+ |||.+      
T Consensus        87 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          87 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             EEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhcccCC
Confidence                                   456789999999999999988   999999999999999999988 55543      


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                              ..++.++|||||||++||++++..|+....... .+...+..+...          
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~-~~~~~i~~~~~~----------  232 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRL----------  232 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTTCCC----------
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHH-HHHHHHhccCCC----------
Confidence                                    346789999999999999999665554322111 111111111110          


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                        ..                +.+++.++.+++.+||+.||++||||.+|++.|+.+.+
T Consensus       233 --~~----------------~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         233 --PT----------------PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             --CC----------------CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             --CC----------------chhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence              00                01344568899999999999999999999999998875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-36  Score=245.22  Aligned_cols=167  Identities=22%  Similarity=0.390  Sum_probs=127.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+. ++..||||.+..                                            
T Consensus        13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~iv~Ey~~~   91 (272)
T d1qpca_          13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMEN   91 (272)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECCTT
T ss_pred             HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCCCCCEeEEEeeeccCCeEEEEEeCCC
Confidence            56677788999999999999986 678899994432                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       ..++.++.++++||.|||+.+   ++||||||+|||++.++.+++ |||.+            
T Consensus        92 g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~  168 (272)
T d1qpca_          92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE  168 (272)
T ss_dssp             CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT
T ss_pred             CcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCCcccccc
Confidence                             457889999999999999988   999999999999999999988 55543            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++|||||||++||++||..|+....... .+............+               
T Consensus       169 ~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~-~~~~~i~~~~~~~~p---------------  232 (272)
T d1qpca_         169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRP---------------  232 (272)
T ss_dssp             TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCC---------------
T ss_pred             ccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCCCCCc---------------
Confidence                            346789999999999999999665554322111 111111111111000               


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                   ..++.++.+++..||+.||++||||++|++.|+.+..
T Consensus       233 -------------~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         233 -------------DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             -------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -------------ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence                         1334568899999999999999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.9e-36  Score=248.52  Aligned_cols=173  Identities=26%  Similarity=0.404  Sum_probs=132.6

Q ss_pred             HHHHHHhCCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc--------------------------------
Q 044875           54 ESLLKATGGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP--------------------------------   96 (268)
Q Consensus        54 ~~l~~~~~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~--------------------------------   96 (268)
                      .+++...++|...+.||+|+||+||+|++.     .+++.||||.+..                                
T Consensus         6 ~~~e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~   85 (301)
T d1lufa_           6 LSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC   85 (301)
T ss_dssp             HHTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred             hhccCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee
Confidence            345556688999999999999999999974     2467899995432                                


Q ss_pred             ------------------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCee
Q 044875           97 ------------------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIV  122 (268)
Q Consensus        97 ------------------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~  122 (268)
                                                                            ...+.++.|++.||+|||+.+   ++
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---iv  162 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FV  162 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eE
Confidence                                                                  246788999999999999988   99


Q ss_pred             ecCCCCCccccCCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHhCC-CC
Q 044875          123 HCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGK-RS  171 (268)
Q Consensus       123 h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~-~p  171 (268)
                      ||||||+|||++.++.+|+ |||.+                             ..++.++|||||||++||+++|. +|
T Consensus       163 HrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p  242 (301)
T d1lufa_         163 HRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP  242 (301)
T ss_dssp             CSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCC
Confidence            9999999999999999888 55532                             35788999999999999999975 56


Q ss_pred             CCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHH
Q 044875          172 TSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDV  251 (268)
Q Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v  251 (268)
                      |......  .+...+..+.....+                            ..++.++.+++..||+.||++||||.+|
T Consensus       243 ~~~~~~~--e~~~~v~~~~~~~~p----------------------------~~~~~~~~~li~~cl~~~P~~RPt~~ev  292 (301)
T d1lufa_         243 YYGMAHE--EVIYYVRDGNILACP----------------------------ENCPLELYNLMRLCWSKLPADRPSFCSI  292 (301)
T ss_dssp             TTTSCHH--HHHHHHHTTCCCCCC----------------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred             CCCCCHH--HHHHHHHcCCCCCCC----------------------------ccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence            6643222  111222111111000                            1334568899999999999999999999


Q ss_pred             HHHHHHhH
Q 044875          252 VNNLQTVK  259 (268)
Q Consensus       252 ~~~L~~l~  259 (268)
                      +++|+++.
T Consensus       293 ~~~L~~i~  300 (301)
T d1lufa_         293 HRILQRMC  300 (301)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHhc
Confidence            99999874

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-35  Score=239.36  Aligned_cols=163  Identities=22%  Similarity=0.374  Sum_probs=128.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|++. ++..||||.++.                                            
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~   82 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA   82 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCT
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccC
Confidence            68888999999999999999996 788999994432                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       ..+.+++.|+++||.|||+.+   ++||||||+||+++.+...++ |||.+            
T Consensus        83 ~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  159 (258)
T d1k2pa_          83 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSV  159 (258)
T ss_dssp             TEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCC
T ss_pred             CCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCCCceeec
Confidence                             457789999999999999988   999999999999999988887 44432            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                      ..++.++||||||+++||++| |+.||......  .+...+........+              
T Consensus       160 ~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~--~~~~~i~~~~~~~~p--------------  223 (258)
T d1k2pa_         160 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS--ETAEHIAQGLRLYRP--------------  223 (258)
T ss_dssp             CSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH--HHHHHHHTTCCCCCC--------------
T ss_pred             ccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH--HHHHHHHhCCCCCCc--------------
Confidence                            357889999999999999998 89999764322  122222211111100              


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQT  257 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~  257 (268)
                                    ..++.++.+++..||+.||++|||++++++.|.+
T Consensus       224 --------------~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         224 --------------HLASEKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             --------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             --------------ccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence                          1334568899999999999999999999998854

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-35  Score=241.77  Aligned_cols=170  Identities=24%  Similarity=0.397  Sum_probs=129.3

Q ss_pred             CCCcCC-cccCCCcceEEEEEec--CCCeEEEEeecCc------------------------------------------
Q 044875           62 GFSSAN-IIGAGSFGSVCKGILD--PDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~-~lG~G~fg~Vy~g~~~--~~~~~vavK~l~~------------------------------------------   96 (268)
                      ++...+ +||+|+||+||+|.+.  +++..||||.+..                                          
T Consensus         9 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~~~~~lvmE   88 (285)
T d1u59a_           9 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVME   88 (285)
T ss_dssp             GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEE
T ss_pred             CeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeeccCeEEEEEE
Confidence            444445 4999999999999874  3456899995432                                          


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.|++.||.|||+.+   ++||||||+||+++.++.+++ |||.+         
T Consensus        89 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~  165 (285)
T d1u59a_          89 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY  165 (285)
T ss_dssp             CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred             eCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccccccc
Confidence                                456889999999999999988   999999999999999988888 55533         


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhc
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVA  204 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  204 (268)
                                           ..++.++|||||||++||++| |+.||.+....  .+...+..+.....+         
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~~i~~~~~~~~p---------  234 (285)
T d1u59a_         166 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQGKRMECP---------  234 (285)
T ss_dssp             ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTTCCCCCC---------
T ss_pred             cccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCC---------
Confidence                                 346789999999999999998 99999864321  222222222111111         


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                         ..++.++.+++..||+.||++||||.+|++.|+.+...+.+
T Consensus       235 -------------------~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~  275 (285)
T d1u59a_         235 -------------------PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  275 (285)
T ss_dssp             -------------------TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             -------------------CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhh
Confidence                               13455688999999999999999999999999988766544

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-35  Score=236.12  Aligned_cols=165  Identities=25%  Similarity=0.385  Sum_probs=128.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+  .|..||||.++.                                            
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~   84 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA   84 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCT
T ss_pred             HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccC
Confidence            4556678899999999999999  478899994433                                            


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-------------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-------------  144 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-------------  144 (268)
                                        ..+++++.|++.||.|||+.+   ++||||||+||+++.++..++ +|+             
T Consensus        85 ~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~  161 (262)
T d1byga_          85 KGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK  161 (262)
T ss_dssp             TEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC------------
T ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCCCcccc
Confidence                              457889999999999999988   999999999999999998877 333             


Q ss_pred             -----------cCCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchh
Q 044875          145 -----------MGNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEK  212 (268)
Q Consensus       145 -----------~~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~  212 (268)
                                 ....++.++||||||+++||++| |+.|+.....  ..+...+........++                
T Consensus       162 ~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~--~~~~~~i~~~~~~~~~~----------------  223 (262)
T d1byga_         162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDAPD----------------  223 (262)
T ss_dssp             CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCCCCCCT----------------
T ss_pred             ccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCCCCCc----------------
Confidence                       23568899999999999999998 6777764322  22222222221111111                


Q ss_pred             hhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          213 TAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                                  ..+.++.+++.+||+.||.+||||.+++++|+.++.
T Consensus       224 ------------~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         224 ------------GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             ------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ------------cCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence                        234567889999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-35  Score=243.45  Aligned_cols=168  Identities=20%  Similarity=0.435  Sum_probs=128.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe----EEEEeecCc----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT----VVSVRDFKP----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~----~vavK~l~~----------------------------------------   96 (268)
                      ++|+..+.||+|+||+||+|.+..+|+    .||+|.+..                                        
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~v   88 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI   88 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeeEE
Confidence            457888899999999999999876665    588884432                                        


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------  145 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------  145 (268)
                                            ....+++.|++.||.|||+.+   ++||||||+||+++.++..++ |||.        
T Consensus        89 ~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceeccccc
Confidence                                  456789999999999999988   999999999999999998888 3432        


Q ss_pred             ---------------------CCCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhh
Q 044875          146 ---------------------GNQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFV  203 (268)
Q Consensus       146 ---------------------~~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~  203 (268)
                                           +..++.++|||||||++||++| |..||......  .+......+.....+        
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~~i~~~~~~~~p--------  235 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQP--------  235 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHHHHHHTCCCCCC--------
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHcCCCCCCC--------
Confidence                                 2457899999999999999998 78888754322  222222222111110        


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                          ..++.++.+++.+||+.||++|||+.+|++.|+.+.+.
T Consensus       236 --------------------~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         236 --------------------PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             --------------------TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             --------------------cccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence                                13345688999999999999999999999999887653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-35  Score=242.47  Aligned_cols=170  Identities=21%  Similarity=0.332  Sum_probs=126.2

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecC-----CCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDP-----DQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~-----~~~~vavK~l~~--------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|+...     +++.||+|.+..                                      
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~   91 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG   91 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCC
Confidence            3677888999999999999999742     357899994432                                      


Q ss_pred             ------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC
Q 044875           97 ------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD  134 (268)
Q Consensus        97 ------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~  134 (268)
                                                                .....++.|++.||.|||+.+   ++||||||+|||++
T Consensus        92 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl~  168 (299)
T d1ywna1          92 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS  168 (299)
T ss_dssp             CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEC
T ss_pred             eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeEC
Confidence                                                      235678999999999999988   99999999999999


Q ss_pred             CCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHhC-CCCCCcccccccchh
Q 044875          135 NDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTG-KRSTSDMFTEGLGLH  183 (268)
Q Consensus       135 ~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg-~~p~~~~~~~~~~~~  183 (268)
                      .++..|+ |||.+                             ..++.++|||||||++|||++| .+||...... ..+.
T Consensus       169 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~-~~~~  247 (299)
T d1ywna1         169 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFC  247 (299)
T ss_dssp             GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-HHHH
T ss_pred             CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHH-HHHH
Confidence            9988888 55543                             3468899999999999999996 4567643221 1222


Q ss_pred             hHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       184 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .....+.....++                            .++.++.+++.+||+.||++|||+++|++.|+.+.+.
T Consensus       248 ~~~~~~~~~~~~~----------------------------~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         248 RRLKEGTRMRAPD----------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             HHHHHTCCCCCCT----------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCCc----------------------------cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            2222222111111                            2344688999999999999999999999999998653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-35  Score=237.75  Aligned_cols=163  Identities=21%  Similarity=0.362  Sum_probs=125.0

Q ss_pred             CcccCCCcceEEEEEecC--CCeEEEEeecCc------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDP--DQTVVSVRDFKP------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~--~~~~vavK~l~~------------------------------------------------   96 (268)
                      +.||+|+||+||+|.+..  .++.||||.+..                                                
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~~~~~lvmE~~~~g   92 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG   92 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEeccCCEEEEEEcCCCC
Confidence            469999999999998743  457899995432                                                


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------------  146 (268)
                                    .....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+               
T Consensus        93 ~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          93 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             cHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence                          457889999999999999988   999999999999999888877 45433               


Q ss_pred             ---------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                     ..++.++|||||||++||+++ |+.||.+....  .+...+..+.....+               
T Consensus       170 ~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~~i~~~~~~~~p---------------  232 (277)
T d1xbba_         170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKGERMGCP---------------  232 (277)
T ss_dssp             -CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTTCCCCCC---------------
T ss_pred             cCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHHHHHcCCCCCCC---------------
Confidence                           336789999999999999998 89999864322  222222221111110               


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                   ..++.++.+++.+||+.||++||||++|+++|+......
T Consensus       233 -------------~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         233 -------------AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             -------------TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             -------------cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence                         133456889999999999999999999999998876544

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=241.11  Aligned_cols=171  Identities=24%  Similarity=0.368  Sum_probs=128.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEe-----cCCCeEEEEeecCc--------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGIL-----DPDQTVVSVRDFKP--------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~-----~~~~~~vavK~l~~--------------------------------------   96 (268)
                      .++|...+.||+|+||.||+|++     ..+++.||||.+..                                      
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~  101 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP  101 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCE
Confidence            36677778999999999999986     24567999994432                                      


Q ss_pred             -------------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCcccc
Q 044875           97 -------------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILL  133 (268)
Q Consensus        97 -------------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill  133 (268)
                                                                 .....++.|++.|++|||+.+   ++||||||+||++
T Consensus       102 ~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl~  178 (311)
T d1t46a_         102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL  178 (311)
T ss_dssp             CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred             EEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccccccccc
Confidence                                                       245678999999999999988   9999999999999


Q ss_pred             CCCCceee-eeccC-----------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchh
Q 044875          134 DNDMTTHV-EYGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLH  183 (268)
Q Consensus       134 ~~~~~~~i-e~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~  183 (268)
                      +.++..++ +||.+                             ..++.++||||||+++|||+|+..|+.........+.
T Consensus       179 ~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~  258 (311)
T d1t46a_         179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (311)
T ss_dssp             ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             cccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            98888877 33322                             4578899999999999999995544443222222233


Q ss_pred             hHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          184 NFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       184 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .....+.....++                            ..+.++.+++.+||+.||.+||||++|+++|+++..+
T Consensus       259 ~~i~~~~~~~~~~----------------------------~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         259 KMIKEGFRMLSPE----------------------------HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHTCCCCCCT----------------------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHhcCCCCCCcc----------------------------cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            3333322211111                            3345688999999999999999999999999987654

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-34  Score=236.09  Aligned_cols=167  Identities=22%  Similarity=0.403  Sum_probs=124.5

Q ss_pred             CCcccCCCcceEEEEEecCCC---eEEEEeecCc----------------------------------------------
Q 044875           66 ANIIGAGSFGSVCKGILDPDQ---TVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        66 ~~~lG~G~fg~Vy~g~~~~~~---~~vavK~l~~----------------------------------------------   96 (268)
                      .++||+|+||+||+|++..++   ..||||.++.                                              
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~  111 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYM  111 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEe
Confidence            367999999999999986433   3689995542                                              


Q ss_pred             ------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           97 ------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        97 ------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                        ..++.++.|++.||.|||+.+   ++||||||+|||+++++.+++ |||.+           
T Consensus       112 ~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~  188 (311)
T d1r0pa_         112 KHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV  188 (311)
T ss_dssp             TTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT
T ss_pred             ecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccccccc
Confidence                              346789999999999999988   999999999999999998888 55533           


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++||||||+++||+++|..|+...... ..+......+.....+           
T Consensus       189 ~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-~~~~~~i~~g~~~~~p-----------  256 (311)
T d1r0pa_         189 HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLLQGRRLLQP-----------  256 (311)
T ss_dssp             TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHHTTCCCCCC-----------
T ss_pred             eecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-HHHHHHHHcCCCCCCc-----------
Confidence                                34678999999999999999987777643222 1222222221111100           


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHhh
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLLR  264 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~~  264 (268)
                                       ..++.++.+++..||+.||++||||.||++.|+.+.+.+.+
T Consensus       257 -----------------~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~  297 (311)
T d1r0pa_         257 -----------------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIG  297 (311)
T ss_dssp             -----------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred             -----------------ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhh
Confidence                             02345688999999999999999999999999999876443

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-34  Score=233.60  Aligned_cols=170  Identities=20%  Similarity=0.363  Sum_probs=129.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|++..+   +..||+|.+..                                         
T Consensus         7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~iv~   86 (273)
T d1mp8a_           7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM   86 (273)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEEE
T ss_pred             HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCeEEEEE
Confidence            5677778999999999999998533   35688984432                                         


Q ss_pred             ---------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--------
Q 044875           97 ---------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--------  146 (268)
Q Consensus        97 ---------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--------  146 (268)
                                           .....++.|++.||.|||+.+   ++||||||+||+++.++..++ |||.+        
T Consensus        87 E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~  163 (273)
T d1mp8a_          87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY  163 (273)
T ss_dssp             ECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC------------
T ss_pred             EeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheeccCCcc
Confidence                                 457889999999999999988   999999999999999988888 44432        


Q ss_pred             --------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                          ..++.++|||||||++||+++ |.+||......  .+...+..+.....+          
T Consensus       164 ~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~~~~~i~~~~~~~~~----------  231 (273)
T d1mp8a_         164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMP----------  231 (273)
T ss_dssp             -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCC----------
T ss_pred             eeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCCCCCC----------
Confidence                                457889999999999999998 88898754322  222222221111110          


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHHh
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTLL  263 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~~  263 (268)
                                        ..++.++.+++..||+.||++|||+.+|++.|+.+.++-.
T Consensus       232 ------------------~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~k  271 (273)
T d1mp8a_         232 ------------------PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK  271 (273)
T ss_dssp             ------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             ------------------CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence                              1334568899999999999999999999999999876643

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-34  Score=235.10  Aligned_cols=184  Identities=22%  Similarity=0.282  Sum_probs=127.9

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      +...+.||+|+||.||+|++  +|+.||||.++.                                              
T Consensus         5 ~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey   82 (303)
T d1vjya_           5 IVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY   82 (303)
T ss_dssp             EEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred             EEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEec
Confidence            34457799999999999998  688999994432                                              


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhc-----CCCCeeecCCCCCccccCCCCceee-eeccCC------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHH-----SEKPIVHCDSKPSNILLDNDMTTHV-EYGMGN------  147 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~-----~~~~i~h~dlk~~nill~~~~~~~i-e~~~~~------  147 (268)
                                       ..+.+++.+++.|++|||+.     ...+++||||||+|||++.++.+|+ |||.+.      
T Consensus        83 ~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~  162 (303)
T d1vjya_          83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT  162 (303)
T ss_dssp             CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred             ccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCC
Confidence                             45678999999999999974     1234999999999999999999988 555320      


Q ss_pred             -------------------------------CcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          148 -------------------------------QFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       148 -------------------------------~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                     .++.++|||||||++||++||..|+................  ......
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~--~~~~~~  240 (303)
T d1vjya_         163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS--DPSVEE  240 (303)
T ss_dssp             TEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS--SCCHHH
T ss_pred             cceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccc--cchHHH
Confidence                                           14568999999999999999988875432221111111000  001111


Q ss_pred             h----cchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          197 V----LDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       197 ~----~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      .    .+..+....+.           .....+....+.+++..||+.||++||||.||++.|+++.+.
T Consensus       241 ~~~~~~~~~~~p~~~~-----------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         241 MRKVVCEQKLRPNIPN-----------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHTTSCCCCCCCG-----------GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHhccccCCCCCc-----------ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            1    11111000000           001125667799999999999999999999999999988754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=232.99  Aligned_cols=161  Identities=19%  Similarity=0.327  Sum_probs=124.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|....+|+.||+|.+.                                             
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~   99 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL   99 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEec
Confidence            46888899999999999999998899999999432                                             


Q ss_pred             ---------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc--------------
Q 044875           96 ---------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM--------------  145 (268)
Q Consensus        96 ---------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~--------------  145 (268)
                                     +.....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.              
T Consensus       100 ~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~  176 (293)
T d1yhwa1         100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM  176 (293)
T ss_dssp             TTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCC
T ss_pred             CCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeecccccccccc
Confidence                           2457789999999999999998   999999999999999888877 4443              


Q ss_pred             -------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc-chhhhcchhhhcCCCccch
Q 044875          146 -------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD-QISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 -------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~  211 (268)
                                   +..++.++||||+||++|||++|+.||.+..... .+........+. ..+                
T Consensus       177 ~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~~~~~~~~~~~~~----------------  239 (293)
T d1yhwa1         177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPELQNP----------------  239 (293)
T ss_dssp             CSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCCCSSG----------------
T ss_pred             ccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHH-HHHHHHhCCCCCCCCc----------------
Confidence                         2457899999999999999999999997532211 111111111111 000                


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                  ...+..+.+++..||+.||++|||+.|+++
T Consensus       240 ------------~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         240 ------------EKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             ------------GGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ------------ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                        023445788999999999999999999874

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-34  Score=240.86  Aligned_cols=126  Identities=23%  Similarity=0.376  Sum_probs=97.7

Q ss_pred             hhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------------------------CC
Q 044875           99 RLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------------------------NQ  148 (268)
Q Consensus        99 ~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------------------------~~  148 (268)
                      ...++.|++.||+|||+.+   |+||||||+||+++.++..++ |||.+                             ..
T Consensus       166 ~~~i~~qi~~gl~yLH~~~---IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  242 (325)
T d1rjba_         166 LLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI  242 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHTT---EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHHhCC---eeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCC
Confidence            5568999999999999988   999999999999999998888 55543                             45


Q ss_pred             cCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHHHH
Q 044875          149 FSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESL  227 (268)
Q Consensus       149 ~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (268)
                      ++.++|||||||++|||+| |+.||.+.... ..+............+                            ..++
T Consensus       243 ~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~-~~~~~~~~~~~~~~~p----------------------------~~~~  293 (325)
T d1rjba_         243 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVD-ANFYKLIQNGFKMDQP----------------------------FYAT  293 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHTTCCCCCC----------------------------TTCC
T ss_pred             CCcceeccchhHHHHHHHhCCCCCCCCCCHH-HHHHHHHhcCCCCCCC----------------------------CcCC
Confidence            7889999999999999998 89999754322 1222222222111110                            1334


Q ss_pred             HHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q 044875          228 ITILKIRVVCSIKSPQERMDTSDVVNNLQ  256 (268)
Q Consensus       228 ~~~~~l~~~C~~~~p~~RPs~~~v~~~L~  256 (268)
                      .++.+++..||+.||++|||+++|++.|.
T Consensus       294 ~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         294 EEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            56889999999999999999999999985

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-34  Score=237.21  Aligned_cols=131  Identities=24%  Similarity=0.398  Sum_probs=99.8

Q ss_pred             cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------------------------cC
Q 044875           97 CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------------------------MG  146 (268)
Q Consensus        97 ~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------------------------~~  146 (268)
                      ...+.++.|++.||+|||+.+   ++||||||+|||++.++..++ +|+                             ..
T Consensus       135 ~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~  211 (299)
T d1fgka_         135 KDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD  211 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhhCC---EEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcC
Confidence            346789999999999999988   999999999999999988887 222                             22


Q ss_pred             CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccchhhhHHhhhhhchHH
Q 044875          147 NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQE  225 (268)
Q Consensus       147 ~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (268)
                      ..|+.++||||||+++|||++ |.+||.+....  .+...+..+.....+                            ..
T Consensus       212 ~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~~~~~i~~~~~~~~p----------------------------~~  261 (299)
T d1fgka_         212 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--ELFKLLKEGHRMDKP----------------------------SN  261 (299)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHTTCCCCCC----------------------------SS
T ss_pred             CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--HHHHHHHcCCCCCCC----------------------------cc
Confidence            568899999999999999998 68888653222  122222221111110                            02


Q ss_pred             HHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          226 SLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       226 ~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      .+.++.+++.+||+.||++|||+.+|++.|+++..
T Consensus       262 ~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         262 CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            34568899999999999999999999999998854

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-34  Score=233.26  Aligned_cols=162  Identities=21%  Similarity=0.319  Sum_probs=124.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      +.|...+.||+|+||+||+|+...+++.||+|.+.                                             
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~   91 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   91 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecC
Confidence            45677788999999999999998899999999432                                             


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                       +.....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+           
T Consensus        92 ~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~  168 (288)
T d2jfla1          92 AGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRD  168 (288)
T ss_dssp             TTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHT
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccCCCccccc
Confidence                             2456789999999999999998   999999999999999988887 44432           


Q ss_pred             ---------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcC
Q 044875          147 ---------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAG  205 (268)
Q Consensus       147 ---------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  205 (268)
                                           ..|+.++|||||||++|||++|+.||.+..... .+..... ..+..+.   .      
T Consensus       169 ~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~-~~~~i~~-~~~~~~~---~------  237 (288)
T d2jfla1         169 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR-VLLKIAK-SEPPTLA---Q------  237 (288)
T ss_dssp             CCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-HHHHHHH-SCCCCCS---S------
T ss_pred             ccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH-HHHHHHc-CCCCCCC---c------
Confidence                                 346789999999999999999999997543221 1111111 1111000   0      


Q ss_pred             CCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          206 GEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                       +...+.++.+++..||+.||++|||++|+++
T Consensus       238 -----------------~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         238 -----------------PSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             -----------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -----------------cccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                             0123455788999999999999999999975

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-34  Score=234.74  Aligned_cols=166  Identities=24%  Similarity=0.388  Sum_probs=127.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+. ++..||||.+..                                            
T Consensus        17 ~~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~lv~Ey~~~   95 (285)
T d1fmka3          17 ESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSK   95 (285)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCTT
T ss_pred             HHEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECcccCCHHHHHHHHHHHHhcccCCEeEEEEEEecCCeEEEEEecCC
Confidence            56777889999999999999997 556799995433                                            


Q ss_pred             -----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------------
Q 044875           97 -----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------------  146 (268)
Q Consensus        97 -----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------------  146 (268)
                                       ..++.++.+++.||+|||+.+   ++||||||+|||++.++..++ |||.+            
T Consensus        96 g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  172 (285)
T d1fmka3          96 GSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ  172 (285)
T ss_dssp             CBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-----------
T ss_pred             CchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCCCceeec
Confidence                             567889999999999999988   999999999999999988888 55543            


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++||||||+++||+++|..|+........ +...+.........               
T Consensus       173 ~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~-~~~~i~~~~~~~~~---------------  236 (285)
T d1fmka3         173 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-VLDQVERGYRMPCP---------------  236 (285)
T ss_dssp             ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-HHHHHHTTCCCCCC---------------
T ss_pred             cccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHH-HHHHHHhcCCCCCC---------------
Confidence                            3578899999999999999997666654222211 11111111111000               


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVK  259 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~  259 (268)
                                   ..+++++.+++.+||+.||++||||.+|+++|+...
T Consensus       237 -------------~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         237 -------------PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             -------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             -------------cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence                         133456889999999999999999999999888643

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-34  Score=232.16  Aligned_cols=162  Identities=19%  Similarity=0.293  Sum_probs=122.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+.                                             
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy   84 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY   84 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEec
Confidence            56777889999999999999998899999999432                                             


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----------  146 (268)
                                       +.....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+           
T Consensus        85 ~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~  161 (271)
T d1nvra_          85 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL  161 (271)
T ss_dssp             CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred             cCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCCcccc
Confidence                             1456789999999999999988   999999999999999888887 55533           


Q ss_pred             ------------------CCc-CccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          147 ------------------NQF-STNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       147 ------------------~~~-~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        ..+ +.++||||+||++|||++|+.||.......................            
T Consensus       162 ~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~------------  229 (271)
T d1nvra_         162 LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPW------------  229 (271)
T ss_dssp             BCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTG------------
T ss_pred             ccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCcc------------
Confidence                              233 5679999999999999999999975332222221111111110000            


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                      ...+.++.+++..||+.||++|||++|+++
T Consensus       230 ----------------~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         230 ----------------KKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             ----------------GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ----------------ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                            022345678899999999999999999864

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.2e-34  Score=232.87  Aligned_cols=163  Identities=18%  Similarity=0.264  Sum_probs=118.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+|+.||+|.+..                                            
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~iv   83 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV   83 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEE
Confidence            567888999999999999999988999999994322                                            


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcC--CCCeeecCCCCCccccCCCCceee-eec----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHS--EKPIVHCDSKPSNILLDNDMTTHV-EYG----  144 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~--~~~i~h~dlk~~nill~~~~~~~i-e~~----  144 (268)
                                               .....++.|++.||.|||+.+  ..+++||||||+|||++.++..++ |||    
T Consensus        84 mEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~  163 (269)
T d2java1          84 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARI  163 (269)
T ss_dssp             EECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHH
T ss_pred             EecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceee
Confidence                                     346789999999999999864  234999999999999999988887 222    


Q ss_pred             -----------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          145 -----------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       145 -----------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                             .+..++.++|||||||++|||++|+.||......  .+...........++      
T Consensus       164 ~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~--~~~~~i~~~~~~~~~------  235 (269)
T d2java1         164 LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQK--ELAGKIREGKFRRIP------  235 (269)
T ss_dssp             C-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHTCCCCCC------
T ss_pred             cccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHH--HHHHHHHcCCCCCCC------
Confidence                                   3356889999999999999999999999753221  111111111111110      


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                            ...+.++.+++..||+.||.+|||++|+++
T Consensus       236 ----------------------~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         236 ----------------------YRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             ----------------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----------------------cccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence                                  023445788999999999999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.98  E-value=6.6e-34  Score=235.99  Aligned_cols=160  Identities=24%  Similarity=0.336  Sum_probs=123.7

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecC----------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK----------------------------------------------   95 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~----------------------------------------------   95 (268)
                      .|+..+.||+|+||+||+|+...+++.||||.+.                                              
T Consensus        16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E   95 (309)
T d1u5ra_          16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME   95 (309)
T ss_dssp             HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEE
Confidence            4777889999999999999998899999999432                                              


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                        +.....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+          
T Consensus        96 ~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~  172 (309)
T d1u5ra_          96 YCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFV  172 (309)
T ss_dssp             CCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCC
T ss_pred             ecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccCCCCccc
Confidence                              2456889999999999999998   999999999999999988888 45432          


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..|+.++|||||||++||+++|+.||.+..... .+........+..    .+.          
T Consensus       173 GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~-~~~~i~~~~~~~~----~~~----------  237 (309)
T d1u5ra_         173 GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPAL----QSG----------  237 (309)
T ss_dssp             SCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCC----SCT----------
T ss_pred             cCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCCC----CCC----------
Confidence                            347889999999999999999999997532211 1111111111110    000          


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ..+..+.+++..||+.||++|||++++++
T Consensus       238 --------------~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         238 --------------HWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             --------------TSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             --------------CCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence                          22345788999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=9.4e-34  Score=230.81  Aligned_cols=159  Identities=23%  Similarity=0.368  Sum_probs=118.3

Q ss_pred             cCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------------   96 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------------   96 (268)
                      ....||+|+||+||+|....+++.||+|.+..                                                
T Consensus        13 ~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE   92 (270)
T d1t4ha_          13 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE   92 (270)
T ss_dssp             EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEE
T ss_pred             eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEe
Confidence            34579999999999999988899999993321                                                


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC-CCceee-eeccC---------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN-DMTTHV-EYGMG---------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~-~~~~~i-e~~~~---------  146 (268)
                                         .....++.|++.||.|||+++ .+++||||||+|||++. ++..++ |||.+         
T Consensus        93 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~  171 (270)
T d1t4ha_          93 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK  171 (270)
T ss_dssp             CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE
T ss_pred             CCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccC
Confidence                               345789999999999999875 56999999999999974 667776 44432         


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc-cchhhhcchhhhcCCCccc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP-DQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~  210 (268)
                                     +.++.++|||||||++|||++|+.||.+...... +......... ..+..              
T Consensus       172 ~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~-~~~~i~~~~~~~~~~~--------------  236 (270)
T d1t4ha_         172 AVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ-IYRRVTSGVKPASFDK--------------  236 (270)
T ss_dssp             ESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH-HHHHHTTTCCCGGGGG--------------
T ss_pred             CcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH-HHHHHHcCCCCcccCc--------------
Confidence                           3578999999999999999999999975322211 1111111111 11111              


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ....++.+++..||+.||++|||++|+++
T Consensus       237 --------------~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         237 --------------VAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             --------------CCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             --------------cCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence                          12334778999999999999999999875

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.9e-34  Score=230.75  Aligned_cols=159  Identities=18%  Similarity=0.265  Sum_probs=123.9

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|+...+++.||+|.+.                                             
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivm   85 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL   85 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEE
Confidence            45777789999999999999998899999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.|++.||+|||+.+   ++||||||+|||++.++..++ |||.+         
T Consensus        86 Ey~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~  162 (263)
T d2j4za1          86 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT  162 (263)
T ss_dssp             ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE
T ss_pred             eecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCCccc
Confidence                               2456789999999999999988   999999999999999888887 45433         


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++|||||||++||+++|+.||......  ........... .+++              
T Consensus       163 ~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~--~~~~~i~~~~~-~~p~--------------  225 (263)
T d2j4za1         163 TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRISRVEF-TFPD--------------  225 (263)
T ss_dssp             ETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHTTCC-CCCT--------------
T ss_pred             ccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC-CCCc--------------
Confidence                            45789999999999999999999999753221  11111111100 0000              


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                    ..+.++.+++..||+.||++|||++|+++
T Consensus       226 --------------~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         226 --------------FVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             --------------TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------------cCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence                          22345778999999999999999999985

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=2.5e-34  Score=234.80  Aligned_cols=166  Identities=25%  Similarity=0.381  Sum_probs=119.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCC---CeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPD---QTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~---~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|++..+   ...||||.+..                                         
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~~~~~l   87 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM   87 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeecchhe
Confidence            4577778899999999999987422   34789994432                                         


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.|++.||.|||+.+   ++||||||+||+++.++..++ +||.+      
T Consensus        88 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          88 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             eeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhcccC
Confidence                                   456789999999999999988   999999999999999988877 44432      


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHh-CCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFT-GKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                              ..++.++||||||+++||++| |+.||.+..... ...............      
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~------  237 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQ-ILHKIDKEGERLPRP------  237 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH-HHHHHHTSCCCCCCC------
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHH-HHHHHHhCCCCCCCc------
Confidence                                    245678999999999999998 899997532221 111111111110000      


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHh
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTV  258 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l  258 (268)
                                            ...+..+.+++..||+.||++||||.+|.+.|++.
T Consensus       238 ----------------------~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         238 ----------------------EDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             ----------------------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ----------------------ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence                                  02345688999999999999999999999988864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=1.5e-33  Score=230.79  Aligned_cols=169  Identities=21%  Similarity=0.311  Sum_probs=128.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...+++.||+|.+..                                            
T Consensus         7 drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~   86 (277)
T d1o6ya_           7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP   86 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred             ceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceE
Confidence            668888999999999999999988999999995432                                            


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-----------
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-----------  141 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-----------  141 (268)
                                              .....++.|++.||.|||+.+   ++||||||+||+++.+...++           
T Consensus        87 ~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~  163 (277)
T d1o6ya_          87 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD  163 (277)
T ss_dssp             EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCEECC-
T ss_pred             EEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhhhhcc
Confidence                                    456789999999999999988   999999999999988777666           


Q ss_pred             --------------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchh
Q 044875          142 --------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPL  201 (268)
Q Consensus       142 --------------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  201 (268)
                                          |...+..++.++||||+||++|||++|+.||........ +.........  ......  
T Consensus       164 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~-~~~~~~~~~~--~~~~~~--  238 (277)
T d1o6ya_         164 SGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPI--PPSARH--  238 (277)
T ss_dssp             ---------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCC--CGGGTS--
T ss_pred             ccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHH-HHHHHhcCCC--CCchhc--
Confidence                                222335688999999999999999999999975322111 1111111000  000000  


Q ss_pred             hhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-ChHHHHHHHHHhH
Q 044875          202 FVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-DTSDVVNNLQTVK  259 (268)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-s~~~v~~~L~~l~  259 (268)
                                            .+.+.++.+++.+||+.||++|| |++++...|.++.
T Consensus       239 ----------------------~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         239 ----------------------EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             ----------------------SSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             ----------------------cCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence                                  02345688899999999999999 7899988887764

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-33  Score=232.73  Aligned_cols=167  Identities=22%  Similarity=0.385  Sum_probs=126.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEec-----CCCeEEEEeecCc---------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILD-----PDQTVVSVRDFKP---------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~-----~~~~~vavK~l~~---------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|.+.     .+++.||||.+..                                       
T Consensus        20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~   99 (308)
T d1p4oa_          20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTL   99 (308)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCE
T ss_pred             HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCcee
Confidence            56677789999999999999874     2357899995543                                       


Q ss_pred             ---------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-e
Q 044875           97 ---------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-E  142 (268)
Q Consensus        97 ---------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e  142 (268)
                                                       ..+..++.++++||.|||+.+   ++||||||+|||++.++.+++ |
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl~D  176 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGD  176 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEECC
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEEee
Confidence                                             235779999999999999988   999999999999999999988 5


Q ss_pred             eccC-----------------------------CCcCccccEeechHHHHHHHhCC-CCCCcccccccchhhHhhhhCcc
Q 044875          143 YGMG-----------------------------NQFSTNGDVYSYGKLLLEIFTGK-RSTSDMFTEGLGLHNFVKMAVPD  192 (268)
Q Consensus       143 ~~~~-----------------------------~~~~~~~Dv~s~G~vl~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~  192 (268)
                      ||.+                             ..++.++||||||+++||++||. +|+.+.....  ....+..+...
T Consensus       177 FGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~--~~~~i~~~~~~  254 (308)
T d1p4oa_         177 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ--VLRFVMEGGLL  254 (308)
T ss_dssp             TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHH--HHHHHHTTCCC
T ss_pred             cccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHhCCCC
Confidence            5543                             34678999999999999999974 6665432211  11111111100


Q ss_pred             chhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHH
Q 044875          193 QISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKS  260 (268)
Q Consensus       193 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~  260 (268)
                      ..                            +..++..+.+++..||+.||++||||++|+++|++..+
T Consensus       255 ~~----------------------------p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         255 DK----------------------------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             CC----------------------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             CC----------------------------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            00                            01334568999999999999999999999999987643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-33  Score=231.99  Aligned_cols=168  Identities=24%  Similarity=0.383  Sum_probs=126.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCe--EEEEeecCc------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQT--VVSVRDFKP------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~--~vavK~l~~------------------------------------------   96 (268)
                      ++|+..+.||+|+||.||+|++..++.  .||||.+..                                          
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV   89 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   89 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEE
Confidence            567778899999999999999976765  467773321                                          


Q ss_pred             -------------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCce
Q 044875           97 -------------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTT  139 (268)
Q Consensus        97 -------------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~  139 (268)
                                                           ..+..++.|++.|+.|||+.+   ++||||||+|||++.++..
T Consensus        90 ~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~~~  166 (309)
T d1fvra_          90 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA  166 (309)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred             EEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCCce
Confidence                                                 235778999999999999988   9999999999999998888


Q ss_pred             ee-eeccC--------------------------CCcCccccEeechHHHHHHHhCCC-CCCcccccccchhhHhhhhCc
Q 044875          140 HV-EYGMG--------------------------NQFSTNGDVYSYGKLLLEIFTGKR-STSDMFTEGLGLHNFVKMAVP  191 (268)
Q Consensus       140 ~i-e~~~~--------------------------~~~~~~~Dv~s~G~vl~el~tg~~-p~~~~~~~~~~~~~~~~~~~~  191 (268)
                      ++ |||.+                          ..++.++|||||||++|||++|.. |+......  .+...+..+..
T Consensus       167 kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~--~~~~~i~~~~~  244 (309)
T d1fvra_         167 KIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKLPQGYR  244 (309)
T ss_dssp             EECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHGGGTCC
T ss_pred             EEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHH--HHHHHHHhcCC
Confidence            77 44432                          347889999999999999999765 56542211  11111111111


Q ss_pred             cchhhhcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          192 DQISEVLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       192 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                      ...                            +..++.++.+++.+||+.||++||||++|++.|+.+.++
T Consensus       245 ~~~----------------------------~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         245 LEK----------------------------PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             CCC----------------------------CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCC----------------------------CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            000                            013345688999999999999999999999999998764

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=229.70  Aligned_cols=113  Identities=27%  Similarity=0.444  Sum_probs=98.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .++|+..+.||+|+||+||+|....+++.||+|.+.                                            
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmE   84 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   84 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEE
Confidence            467888899999999999999998899999999432                                            


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhc-CCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHH-SEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~-~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                        +.....++.|++.||.|||+. +   |+||||||+|||++.++..++ |||.+         
T Consensus        85 y~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~  161 (322)
T d1s9ja_          85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  161 (322)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-
T ss_pred             cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCCCccc
Confidence                              144678999999999999974 7   999999999999999988888 55543         


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDM  175 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~  175 (268)
                                      ..|+.++||||+||+++||++|+.||...
T Consensus       162 ~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~  206 (322)
T d1s9ja_         162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP  206 (322)
T ss_dssp             --CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCC
T ss_pred             cccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence                            56899999999999999999999999753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=2.8e-32  Score=231.03  Aligned_cols=160  Identities=21%  Similarity=0.332  Sum_probs=123.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...+|+.||+|.+..                                            
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEE
Confidence            678888999999999999999988999999994421                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC------
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG------  146 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~------  146 (268)
                                             .....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||.+      
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKK  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEECSSS
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeeecCCC
Confidence                                   356778999999999999998   999999999999999988887 55532      


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc--chhhhcchhhhc
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD--QISEVLDPLFVA  204 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~  204 (268)
                                          ..|+.++||||+||++|||++|+.||......  ............  ..+.        
T Consensus       161 ~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~--------  230 (364)
T d1omwa3         161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMAVELPD--------  230 (364)
T ss_dssp             CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS--CHHHHHHHSSSCCCCCCS--------
T ss_pred             cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcccCCCCCCC--------
Confidence                                34788999999999999999999999753222  111111111111  1110        


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                                          ..+.++.+++..||+.||++|||     ++++++
T Consensus       231 --------------------~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         231 --------------------SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             --------------------SSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             --------------------CCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence                                22345788999999999999999     477763

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.5e-32  Score=225.98  Aligned_cols=173  Identities=18%  Similarity=0.232  Sum_probs=126.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      ++|...+.||+|+||.||+|+...+++.||||.+                                              
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~   86 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG   86 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC
Confidence            4688889999999999999999888999999932                                              


Q ss_pred             --------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC---CCceee-eeccC----------
Q 044875           95 --------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN---DMTTHV-EYGMG----------  146 (268)
Q Consensus        95 --------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~---~~~~~i-e~~~~----------  146 (268)
                                    +......++.+++.||.|||+.+   ++||||||+||+++.   +...++ |||.+          
T Consensus        87 ~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~  163 (299)
T d1ckia_          87 PSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ  163 (299)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCC
T ss_pred             CchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceecccccccc
Confidence                          22567889999999999999998   999999999998753   233443 44432          


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccc--hhhHhhhhCccchhhhcch
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG--LHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~  200 (268)
                                              ..++.++||||||+++||+++|+.||.........  ................   
T Consensus       164 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  240 (299)
T d1ckia_         164 HIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL---  240 (299)
T ss_dssp             BCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHH---
T ss_pred             ceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHh---
Confidence                                    34788999999999999999999999764332211  1111111000000000   


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKST  261 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~  261 (268)
                                            ...++.++.+++..||+.||++||+++++.+.|+.+...
T Consensus       241 ----------------------~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         241 ----------------------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             ----------------------TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ----------------------ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence                                  013346688999999999999999999999998887543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-32  Score=225.58  Aligned_cols=184  Identities=18%  Similarity=0.224  Sum_probs=124.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEec-CCCeEEEEeecCc------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILD-PDQTVVSVRDFKP------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~-~~~~~vavK~l~~------------------------------------------   96 (268)
                      .++|...+.||+|+||+||+|... .+++.||+|.+..                                          
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            367888899999999999999984 4578899994321                                          


Q ss_pred             ------------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-----
Q 044875           97 ------------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-----  141 (268)
Q Consensus        97 ------------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-----  141 (268)
                                                    .....++.|++.||+|||+.+   ++||||||+|||++.++..++     
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~dfg~  162 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL  162 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred             cCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecchhh
Confidence                                          345679999999999999988   999999999999999888877     


Q ss_pred             ----------------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhh
Q 044875          142 ----------------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISE  196 (268)
Q Consensus       142 ----------------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~  196 (268)
                                            |...+..|+.++||||+||++|||++|+.||...... ..+..........   ....
T Consensus       163 ~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~  241 (305)
T d1blxa_         163 ARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDWPR  241 (305)
T ss_dssp             CCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGSCT
T ss_pred             hhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCchhcccc
Confidence                                  2223456899999999999999999999999754321 1122222111111   0000


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ............ ....     ...........+.+++..||+.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~-~~~~-----~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         242 DVALPRQAFHSK-SAQP-----IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             TCSSCGGGSCCC-CCCC-----GGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccchhhhhccc-cccc-----hhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            000000000000 0000     00000122345778899999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.9e-32  Score=223.83  Aligned_cols=159  Identities=19%  Similarity=0.307  Sum_probs=122.6

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.+.                                             
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivm   87 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL   87 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEE
Confidence            46788899999999999999998889999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                         +.....++.|++.||.|||+.+   ++||||||+||+++.++..++ |||.+         
T Consensus        88 Ey~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~  164 (288)
T d1uu3a_          88 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ  164 (288)
T ss_dssp             CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred             EccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccCCcc
Confidence                               2456789999999999999998   999999999999999888777 44432         


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                          ..++.++||||+||++|||++|+.||......  .+......... .+++          
T Consensus       165 ~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~~~~-~~p~----------  231 (288)
T d1uu3a_         165 ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY--LIFQKIIKLEY-DFPE----------  231 (288)
T ss_dssp             -----CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHTTCC-CCCT----------
T ss_pred             cccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHH--HHHHHHHcCCC-CCCc----------
Confidence                                45788999999999999999999999753211  11111111100 0000          


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                        ..+.++.+++..||+.||++|||++|+.+
T Consensus       232 ------------------~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         232 ------------------KFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             ------------------TCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             ------------------cCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence                              22345778999999999999999999754

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.97  E-value=3.5e-32  Score=223.70  Aligned_cols=183  Identities=15%  Similarity=0.264  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+.. +++.||+|.+..                                            
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e   80 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFE   80 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEE
Confidence            56777889999999999999997 789999995432                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc-----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM-----------  145 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~-----------  145 (268)
                                         .....++.|++.||.|||+.+   |+||||||+|||++.++..++ |||.           
T Consensus        81 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~  157 (286)
T d1ob3a_          81 HLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY  157 (286)
T ss_dssp             CCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred             eehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccCcccc
Confidence                               456789999999999999988   999999999999999988887 3331           


Q ss_pred             -----------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch----hhhc
Q 044875          146 -----------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP----LFVA  204 (268)
Q Consensus       146 -----------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~~~  204 (268)
                                       ...++.++|+||+||+++|+++|+.||.+..... .+................+.    ....
T Consensus       158 ~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T d1ob3a_         158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDP  236 (286)
T ss_dssp             ----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred             ceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhhccc
Confidence                             1346899999999999999999999997543221 11111111111100000000    0000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .........     ...........+.+++.+|++.||++|||++|+++
T Consensus       237 ~~~~~~~~~-----~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         237 NFTVYEPLP-----WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCCCCCCCC-----GGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccccccCcc-----hhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000000000     00011123456788999999999999999999874

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.5e-32  Score=223.61  Aligned_cols=189  Identities=15%  Similarity=0.207  Sum_probs=125.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+++.||||.+..                                            
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            467778899999999999999988999999995421                                            


Q ss_pred             -------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----------
Q 044875           97 -------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----------  146 (268)
Q Consensus        97 -------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----------  146 (268)
                                         .....++.|++.||+|||+.+   |+||||||+|||++.+...++ +||.+          
T Consensus        82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~  158 (292)
T d1unla_          82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY  158 (292)
T ss_dssp             CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCC
T ss_pred             eccccccccccccccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCCCccc
Confidence                               456789999999999999988   999999999999998887777 44422          


Q ss_pred             ------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          147 ------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                        ..++.++||||+||+++||++|+.|+.........+............ .............
T Consensus       159 ~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  237 (292)
T d1unla_         159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE-EQWPSMTKLPDYK  237 (292)
T ss_dssp             CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCT-TTCTTGGGSTTCC
T ss_pred             eeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCCh-hhhhhhhhccccc
Confidence                              235789999999999999999999976433222222222111111100 0000000000000


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      .....................+.+++.+|++.||.+|||++|+++
T Consensus       238 ~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         238 PYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             CCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000000000001111123345778899999999999999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=9.7e-32  Score=222.73  Aligned_cols=164  Identities=20%  Similarity=0.275  Sum_probs=122.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      .+.|...+.||+|+||+||+|+...+++.||+|.+.                                            
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE   87 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQ   87 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            356788889999999999999998889999999432                                            


Q ss_pred             ------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC---CCCceee-eecc--------
Q 044875           96 ------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD---NDMTTHV-EYGM--------  145 (268)
Q Consensus        96 ------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~---~~~~~~i-e~~~--------  145 (268)
                                        +.....++.|++.||.|||+.+   ++||||||+||++.   .++..++ |||.        
T Consensus        88 ~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~  164 (307)
T d1a06a_          88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS  164 (307)
T ss_dssp             CCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC----------
T ss_pred             ccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeEEccCCC
Confidence                              2456789999999999999988   99999999999995   3555665 4443        


Q ss_pred             ------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          146 ------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       146 ------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                        +..|+.++||||+||++|||++|+.||.+....  .+.............+.          
T Consensus       165 ~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~~~~i~~~~~~~~~~~----------  232 (307)
T d1a06a_         165 VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KLFEQILKAEYEFDSPY----------  232 (307)
T ss_dssp             --------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHTTCCCCCTTT----------
T ss_pred             eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHhccCCCCCCcc----------
Confidence                              345889999999999999999999999753221  11111111111000000          


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                     ....+.++.+++..||+.||++|||++|+++
T Consensus       233 ---------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         233 ---------------WDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             ---------------TTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ---------------ccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                           0023445788999999999999999999986

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=9.4e-32  Score=222.31  Aligned_cols=184  Identities=18%  Similarity=0.274  Sum_probs=125.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.+..                                            
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            578888999999999999999988999999995421                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC---------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG---------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~---------  146 (268)
                                          .....++.|++.||.|||+.+   ++||||||+|||++.+...++ |||.+         
T Consensus        82 ~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~  158 (298)
T d1gz8a_          82 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  158 (298)
T ss_dssp             CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred             ecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCCccc
Confidence                                456789999999999999988   999999999999998888777 33321         


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh-Ccc-c-hhhhc-chhhh
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA-VPD-Q-ISEVL-DPLFV  203 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~-~-~~~~~-d~~~~  203 (268)
                                         ..++.++|+||+||++||+++|+.||....... .+....... .+. . ..... .+...
T Consensus       159 ~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~  237 (298)
T d1gz8a_         159 YTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPDYK  237 (298)
T ss_dssp             TTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred             ceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccccccccc
Confidence                               235789999999999999999999997532221 111111111 111 0 00000 00000


Q ss_pred             cCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          204 AGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ............     ........++.+++..|++.||++|||+.|+++
T Consensus       238 ~~~~~~~~~~~~-----~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         238 PSFPKWARQDFS-----KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             TTSCCCCCCCHH-----HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccchh-----hhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            000000000000     000123456788999999999999999999985

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=9.2e-32  Score=219.74  Aligned_cols=163  Identities=20%  Similarity=0.316  Sum_probs=124.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|+...+++.+|+|.+.                                             
T Consensus         3 ~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~   82 (277)
T d1phka_           3 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETN   82 (277)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             ccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccC
Confidence            56778899999999999999998899999999542                                             


Q ss_pred             --------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           96 --------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        96 --------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                +.....++.|++.||+|||+.+   ++||||||+||+++.++..++ |||.+  
T Consensus        83 ~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~  159 (277)
T d1phka_          83 TFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGFSCQ  159 (277)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred             cceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchheeE
Confidence                                      1456889999999999999988   999999999999999988887 55433  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhh
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISE  196 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  196 (268)
                                                    ..++.++||||+||+++||++|+.||.+.....  ........... ...
T Consensus       160 ~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~--~~~~i~~~~~~-~~~  236 (277)
T d1phka_         160 LDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML--MLRMIMSGNYQ-FGS  236 (277)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHTCCC-CCT
T ss_pred             ccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHH--HHHHHHhCCCC-CCC
Confidence                                          235778999999999999999999998543211  11111111100 000


Q ss_pred             hcchhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          197 VLDPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       197 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                         +                     .....+.++.+++..||+.||++|||+.+|++
T Consensus       237 ---~---------------------~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         237 ---P---------------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             ---T---------------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ---c---------------------ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence               0                     00123456888999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.2e-32  Score=222.14  Aligned_cols=163  Identities=17%  Similarity=0.261  Sum_probs=121.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      +.|...+.||+|+||+||+|....+|+.||+|.+..                                            
T Consensus        10 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~   89 (293)
T d1jksa_          10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI   89 (293)
T ss_dssp             GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred             cCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            567888999999999999999988999999995421                                            


Q ss_pred             -----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCc----eee-eecc---
Q 044875           97 -----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMT----THV-EYGM---  145 (268)
Q Consensus        97 -----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~----~~i-e~~~---  145 (268)
                                             .....++.|++.||.|||+.+   ++||||||+||+++.+..    .++ |||.   
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~  166 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK  166 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecchhhhhh
Confidence                                   456789999999999999988   999999999999987653    333 3432   


Q ss_pred             -----------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          146 -----------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       146 -----------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             +..++.++||||+||++|||++|+.||.+.....  ........... ....    .
T Consensus       167 ~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~--~~~~i~~~~~~-~~~~----~  239 (293)
T d1jksa_         167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE--TLANVSAVNYE-FEDE----Y  239 (293)
T ss_dssp             CTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHTTCCC-CCHH----H
T ss_pred             cCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHH--HHHHHHhcCCC-CCch----h
Confidence                                   2457899999999999999999999997532211  11111111000 0000    0


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                          ....+..+.+++..||+.||++|||++++++
T Consensus       240 --------------------~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         240 --------------------FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             --------------------HTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             --------------------cCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                                0023445778999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=222.35  Aligned_cols=186  Identities=18%  Similarity=0.296  Sum_probs=123.5

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|+..+.||+|+||+||+|+...+|+.||||.+..                                            
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~   89 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK   89 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC---------
T ss_pred             CCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccC
Confidence            678888999999999999999988999999994421                                            


Q ss_pred             ---------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC--
Q 044875           97 ---------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG--  146 (268)
Q Consensus        97 ---------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~--  146 (268)
                                                 .....++.|++.||.|||+.+   ++||||||+|||++.++..++ +|+.+  
T Consensus        90 ~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg~~~~  166 (318)
T d3blha1          90 GSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARA  166 (318)
T ss_dssp             -CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred             ceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecceeee
Confidence                                       345678999999999999988   999999999999999888777 23321  


Q ss_pred             ------------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhh--Cccch
Q 044875          147 ------------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMA--VPDQI  194 (268)
Q Consensus       147 ------------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~  194 (268)
                                                    ..++.++||||+||+++|+++|+.||.+..... .+.......  .+...
T Consensus       167 ~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~  245 (318)
T d3blha1         167 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEV  245 (318)
T ss_dssp             CCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred             cccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHH-HHHHHHHhcCCCChhh
Confidence                                          247889999999999999999999997532211 111111111  11111


Q ss_pred             -hhhcchhhhcCCC--ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          195 -SEVLDPLFVAGGE--EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       195 -~~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       .............  ..........+.   .......+.+++.+|++.||++|||++|+++
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         246 WPNVDNYELYEKLELVKGQKRKVKDRLK---AYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             STTCCCC-------CCSSCCBCHHHHHH---HHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccchhhhhhhhcccccccccchhhhc---cccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence             0000000000000  000000000000   0122345677899999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=220.45  Aligned_cols=178  Identities=19%  Similarity=0.262  Sum_probs=120.4

Q ss_pred             CcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------------
Q 044875           67 NIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------------   96 (268)
Q Consensus        67 ~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------------   96 (268)
                      ++||+|+||+||+|....+++.||+|.+..                                                  
T Consensus         4 ~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~   83 (299)
T d1ua2a_           4 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME   83 (299)
T ss_dssp             EEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS
T ss_pred             eEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhc
Confidence            579999999999999988999999995421                                                  


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------------  146 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------------  146 (268)
                                      .....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.+             
T Consensus        84 ~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~  160 (299)
T d1ua2a_          84 TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ  160 (299)
T ss_dssp             EEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred             chHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCcccccce
Confidence                            456789999999999999998   999999999999999988887 44432             


Q ss_pred             ---------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhhcchhhhcCCCc
Q 044875          147 ---------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEVLDPLFVAGGEE  208 (268)
Q Consensus       147 ---------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~  208 (268)
                                     ..++.++||||+||++|||++|..||....... .+..........   ............... 
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~-  238 (299)
T d1ua2a_         161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFK-  238 (299)
T ss_dssp             CCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCC-
T ss_pred             ecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchhhhhc-
Confidence                           236889999999999999999999987532211 111111111111   000000000000000 


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+.......    .......+.+++..|++.||++|||++|+++
T Consensus       239 ~~~~~~~~~~----~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         239 SFPGIPLHHI----FSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             CCCCCCHHHH----CTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             cCCCCChHHh----cccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            0000000000    0122356888999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=219.22  Aligned_cols=153  Identities=22%  Similarity=0.351  Sum_probs=118.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+.                                             
T Consensus         4 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~   83 (273)
T d1xwsa_           4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS   83 (273)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred             CeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCe
Confidence            56788889999999999999998899999999432                                             


Q ss_pred             -------------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-Cceee-eeccC--
Q 044875           96 -------------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-MTTHV-EYGMG--  146 (268)
Q Consensus        96 -------------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-~~~~i-e~~~~--  146 (268)
                                               +.....++.|++.||.|||+.+   ++||||||+||+++.+ ...++ |||.+  
T Consensus        84 ~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~a~~  160 (273)
T d1xwsa_          84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL  160 (273)
T ss_dssp             EEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred             EEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccccee
Confidence                                     1446789999999999999988   9999999999999854 55555 55543  


Q ss_pred             -----------------------CC-cCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhh
Q 044875          147 -----------------------NQ-FSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLF  202 (268)
Q Consensus       147 -----------------------~~-~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  202 (268)
                                             .. ++.++||||+||++||+++|+.||.....       ......  .+    .+  
T Consensus       161 ~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-------i~~~~~--~~----~~--  225 (273)
T d1xwsa_         161 LKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQV--FF----RQ--  225 (273)
T ss_dssp             CCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCC--CC----SS--
T ss_pred             cccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCchH-------Hhhccc--CC----CC--
Confidence                                   22 35678999999999999999999974211       000000  00    00  


Q ss_pred             hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                            ..+.++.+++.+||+.||++|||++|+++
T Consensus       226 ----------------------~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         226 ----------------------RVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             ----------------------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ----------------------CCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                                  12345788999999999999999999985

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=1.5e-31  Score=225.41  Aligned_cols=163  Identities=18%  Similarity=0.262  Sum_probs=122.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeec----------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDF----------------------------------------------   94 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l----------------------------------------------   94 (268)
                      ++|...+.||+|+||.||+|....+|+.||+|.+                                              
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  108 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFL  108 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            5688889999999999999999888999999933                                              


Q ss_pred             ----------------CccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccC--CCCceee-eeccC---------
Q 044875           95 ----------------KPCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLD--NDMTTHV-EYGMG---------  146 (268)
Q Consensus        95 ----------------~~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~--~~~~~~i-e~~~~---------  146 (268)
                                      ++.....++.+++.||.|||+.+   ++||||||+|||++  .++..++ |||.+         
T Consensus       109 ~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~  185 (352)
T d1koba_         109 SGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV  185 (352)
T ss_dssp             CCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCE
T ss_pred             CCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeecccceecCCCCce
Confidence                            22456789999999999999988   99999999999998  4455555 55533         


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++||||+||++|||++|+.||.+....  ............ ....    .       
T Consensus       186 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~~i~~~~~~-~~~~----~-------  251 (352)
T d1koba_         186 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQNVKRCDWE-FDED----A-------  251 (352)
T ss_dssp             EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHHHHHHCCCC-CCSS----T-------
T ss_pred             eeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-CCcc----c-------
Confidence                             45789999999999999999999999753221  111111111110 0000    0       


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ....+.++.+++..||+.||.+|||+.|+++
T Consensus       252 -------------~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         252 -------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             -------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                         0022345788999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-31  Score=226.66  Aligned_cols=188  Identities=20%  Similarity=0.261  Sum_probs=124.0

Q ss_pred             CCcCCcccCCCcceEEEEEecCCCeEEEEeecCc----------------------------------------------
Q 044875           63 FSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP----------------------------------------------   96 (268)
Q Consensus        63 f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~----------------------------------------------   96 (268)
                      |+..++||+|+||+||+|+...+++.||||.+..                                              
T Consensus        22 Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~  101 (350)
T d1q5ka_          22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV  101 (350)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSSCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECC
T ss_pred             cEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchHHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEecc
Confidence            5556789999999999999988999999993321                                              


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC--------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG--------  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~--------  146 (268)
                                          .....++.|++.||.|||+.+   |+||||||+|||++.+. ..++ |||.+        
T Consensus       102 ~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~  178 (350)
T d1q5ka_         102 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP  178 (350)
T ss_dssp             SEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSC
T ss_pred             CCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchhhccCCcc
Confidence                                345678999999999999988   99999999999998764 6666 55532        


Q ss_pred             -------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCcc---chhhhcchhhhc
Q 044875          147 -------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPD---QISEVLDPLFVA  204 (268)
Q Consensus       147 -------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~  204 (268)
                                         ..++.++||||+||+++|+++|+.||...... ..+..........   .+..........
T Consensus       179 ~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~  257 (350)
T d1q5ka_         179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNPNYTEF  257 (350)
T ss_dssp             CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCC---CC
T ss_pred             cccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhhccchhhc
Confidence                               34789999999999999999999999753221 1112221111110   111100000000


Q ss_pred             CCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          205 GGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                      ........    ............++.+++.+|++.||++|||+.|+++  +++++
T Consensus       258 ~~~~~~~~----~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~  309 (350)
T d1q5ka_         258 KFPQIKAH----PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  309 (350)
T ss_dssp             CCCCCCCC----CGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             cccccccC----chhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccc
Confidence            00000000    0000001123445788999999999999999999985  45444

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.7e-32  Score=224.96  Aligned_cols=159  Identities=25%  Similarity=0.413  Sum_probs=123.3

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.+.                                             
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            56778899999999999999999899999999442                                             


Q ss_pred             --------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec----------
Q 044875           96 --------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG----------  144 (268)
Q Consensus        96 --------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~----------  144 (268)
                                          +.....++.+++.||.|||+.+   ++||||||+|||++.++..++ +||          
T Consensus        82 mEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~  158 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA  158 (320)
T ss_dssp             EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC
T ss_pred             EeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhcccccc
Confidence                                1456789999999999999998   999999999999999888877 333          


Q ss_pred             -----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCC
Q 044875          145 -----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGE  207 (268)
Q Consensus       145 -----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  207 (268)
                                       .+..++.++||||+||++|||++|+.||.+....  .+........+ ..+.           
T Consensus       159 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~--~~~~~i~~~~~-~~p~-----------  224 (320)
T d1xjda_         159 KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE--ELFHSIRMDNP-FYPR-----------  224 (320)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT-----------
T ss_pred             cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHcCCC-CCCc-----------
Confidence                             2356889999999999999999999999753221  11111111111 1110           


Q ss_pred             ccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChH-HHHH
Q 044875          208 EEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTS-DVVN  253 (268)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~-~v~~  253 (268)
                                       ..+.++.+++..||+.||++|||+. ++.+
T Consensus       225 -----------------~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         225 -----------------WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             -----------------TSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             -----------------cCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence                             2234578899999999999999985 6753

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=2.2e-31  Score=224.24  Aligned_cols=163  Identities=16%  Similarity=0.206  Sum_probs=121.8

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|....+|+.||+|.+.                                             
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~  105 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM  105 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence            57888899999999999999998899999999432                                             


Q ss_pred             -----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCC--CCceee-eeccC---------
Q 044875           96 -----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDN--DMTTHV-EYGMG---------  146 (268)
Q Consensus        96 -----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~--~~~~~i-e~~~~---------  146 (268)
                                       +.....++.|++.||.|||+.+   ++||||||+|||++.  +...++ |||.+         
T Consensus       106 ~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~  182 (350)
T d1koaa2         106 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV  182 (350)
T ss_dssp             CSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCE
T ss_pred             CCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchheeccccccc
Confidence                             2456789999999999999998   999999999999964  345555 55533         


Q ss_pred             -----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCcc
Q 044875          147 -----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEE  209 (268)
Q Consensus       147 -----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~  209 (268)
                                       ..++.++||||+||++|||++|+.||.+.... ..+.........  ..    ...       
T Consensus       183 ~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~~--~~----~~~-------  248 (350)
T d1koaa2         183 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDWN--MD----DSA-------  248 (350)
T ss_dssp             EEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--SC----CGG-------
T ss_pred             ceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCC--CC----ccc-------
Confidence                             45788999999999999999999999753221 111111111110  00    000       


Q ss_pred             chhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          210 GEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ....+.++.+++..||+.||++|||++|+++
T Consensus       249 -------------~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         249 -------------FSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             -------------GGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             -------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                         0022345788999999999999999999976

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=4.3e-31  Score=222.55  Aligned_cols=159  Identities=18%  Similarity=0.233  Sum_probs=123.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|+...+|+.||+|.+.                                             
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~  120 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM  120 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccccccccccc
Confidence            46778889999999999999998899999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                         +.....++.|++.||.|||+.+   ++||||||+|||++.++..++ |||.          
T Consensus       121 e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~  197 (350)
T d1rdqe_         121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT  197 (350)
T ss_dssp             ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCC
T ss_pred             ccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeeccccccc
Confidence                               1456789999999999999998   999999999999999988877 5553          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..++.++||||+||++|||++|+.||.+....  .+.......... .+.               
T Consensus       198 ~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~~-~p~---------------  259 (350)
T d1rdqe_         198 LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI--QIYEKIVSGKVR-FPS---------------  259 (350)
T ss_dssp             CEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCC-CCT---------------
T ss_pred             ccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHH--HHHHHHhcCCCC-CCc---------------
Confidence                          345789999999999999999999999753211  111111111110 000               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                   ..+.++.+++..||+.||.+|+     |++++++
T Consensus       260 -------------~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         260 -------------HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             -------------TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------cCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence                         2234578899999999999994     8898875

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-31  Score=221.43  Aligned_cols=163  Identities=23%  Similarity=0.331  Sum_probs=121.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||+||+|....+++.||+|.++                                             
T Consensus         5 ~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~   84 (321)
T d1tkia_           5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS   84 (321)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCC
Confidence            56777889999999999999998899999999332                                             


Q ss_pred             ----------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC--ceee-eeccC----------
Q 044875           96 ----------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM--TTHV-EYGMG----------  146 (268)
Q Consensus        96 ----------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~--~~~i-e~~~~----------  146 (268)
                                      +.....++.|++.||.|||+.+   ++||||||+|||++.+.  ..++ |||.+          
T Consensus        85 gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~  161 (321)
T d1tkia_          85 GLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR  161 (321)
T ss_dssp             CCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE
T ss_pred             CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhccccCCccc
Confidence                            2456789999999999999988   99999999999998654  3333 44433          


Q ss_pred             ----------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccc
Q 044875          147 ----------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEG  210 (268)
Q Consensus       147 ----------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~  210 (268)
                                      ..++.++||||+||++|||++|..||......  .+.......... +..    ...       
T Consensus       162 ~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~--~~~~~i~~~~~~-~~~----~~~-------  227 (321)
T d1tkia_         162 LLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ--QIIENIMNAEYT-FDE----EAF-------  227 (321)
T ss_dssp             EEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHTCCC-CCH----HHH-------
T ss_pred             ccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCCC-CCh----hhc-------
Confidence                            34788999999999999999999999753221  111111111000 000    000       


Q ss_pred             hhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          211 EKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                                   ...+.++.+++..|++.||.+|||+.|+++
T Consensus       228 -------------~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         228 -------------KEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -------------TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -------------cCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                         022345788999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.6e-31  Score=225.22  Aligned_cols=185  Identities=16%  Similarity=0.350  Sum_probs=121.4

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      +++|...+.||+|+||+||+|....+++.||||.+..                                           
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~   86 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV   86 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceE
Confidence            3567778899999999999999988999999995432                                           


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-------  146 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-------  146 (268)
                                            .....++.|++.||.|||+++   ++||||||+|||++.++..++ +||.+       
T Consensus        87 ~l~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~  163 (345)
T d1pmea_          87 YLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH  163 (345)
T ss_dssp             EEEEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred             EEEEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeeccCCC
Confidence                                  456789999999999999998   999999999999999888877 44322       


Q ss_pred             ------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhh-hCcc--chhhhcc
Q 044875          147 ------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKM-AVPD--QISEVLD  199 (268)
Q Consensus       147 ------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~d  199 (268)
                                              ..++.++||||+||+++|+++|+.||........ ....... ..+.  .......
T Consensus       164 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  242 (345)
T d1pmea_         164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ-LNHILGILGSPSQEDLNCIIN  242 (345)
T ss_dssp             CBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHTCCC
T ss_pred             ccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHH-HHHHhhhccCCChhhhhhhhh
Confidence                                    2367889999999999999999999975332111 1111110 1110  0000000


Q ss_pred             hhh---hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          200 PLF---VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       200 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ...   ..............     .......++.+++..|++.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         243 LKARNYLLSLPHKNKVPWNR-----LFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHHHHHHTSCCCCCCCHHH-----HCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhcccccCCccCCCCHHH-----hCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            000   00000000000000     00012235788999999999999999999985

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.3e-31  Score=220.70  Aligned_cols=159  Identities=21%  Similarity=0.335  Sum_probs=122.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecC---------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFK---------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~---------------------------------------------   95 (268)
                      ++|...+.||+|+||.||+|+...+++.||+|.+.                                             
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~   84 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM   84 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccce
Confidence            56888899999999999999998899999999432                                             


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eec-----------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYG-----------  144 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~-----------  144 (268)
                                         +.....++.+++.||.|||+.+   ++||||||+|||++.++..++ |||           
T Consensus        85 ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~  161 (337)
T d1o6la_          85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT  161 (337)
T ss_dssp             ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred             eccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeecccccccccCCcc
Confidence                               2456778899999999999998   999999999999999988887 333           


Q ss_pred             ----------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCc
Q 044875          145 ----------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEE  208 (268)
Q Consensus       145 ----------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  208 (268)
                                      .+..|+.++|+||+||++|||++|+.||......  .+......... .++.            
T Consensus       162 ~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~--~~~~~i~~~~~-~~p~------------  226 (337)
T d1o6la_         162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE--RLFELILMEEI-RFPR------------  226 (337)
T ss_dssp             BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCC-CCCT------------
T ss_pred             cccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH--HHHHHHhcCCC-CCCc------------
Confidence                            3356889999999999999999999999853221  11111111111 1110            


Q ss_pred             cchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          209 EGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                                      ..+.++.+++..||+.||.+||+     ++++++
T Consensus       227 ----------------~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         227 ----------------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             ----------------TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ----------------cCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence                            22344678899999999999996     666664

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.1e-31  Score=220.47  Aligned_cols=167  Identities=17%  Similarity=0.262  Sum_probs=119.5

Q ss_pred             CCCCcC-CcccCCCcceEEEEEecCCCeEEEEeecC--------------------------------------------
Q 044875           61 GGFSSA-NIIGAGSFGSVCKGILDPDQTVVSVRDFK--------------------------------------------   95 (268)
Q Consensus        61 ~~f~~~-~~lG~G~fg~Vy~g~~~~~~~~vavK~l~--------------------------------------------   95 (268)
                      ++|... +.||+|+||+||+|....+++.||+|.+.                                            
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy   90 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC   90 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred             cCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCcHHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEEC
Confidence            567654 46999999999999998889999999332                                            


Q ss_pred             -------------------ccchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC---Cceee-eecc-------
Q 044875           96 -------------------PCTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND---MTTHV-EYGM-------  145 (268)
Q Consensus        96 -------------------~~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~---~~~~i-e~~~-------  145 (268)
                                         +.....++.|++.||+|||+.+   ++||||||+|||++.+   +..++ |||.       
T Consensus        91 ~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~  167 (335)
T d2ozaa1          91 LDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSH  167 (335)
T ss_dssp             CCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCC
T ss_pred             CCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC---CccccccccccccccccccccccccccceeeeccCC
Confidence                               2456789999999999999998   9999999999999863   33455 4443       


Q ss_pred             -------------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCC
Q 044875          146 -------------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGG  206 (268)
Q Consensus       146 -------------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~  206 (268)
                                         +..|+.++||||+||++||+++|+.||.+...... ...........            ..
T Consensus       168 ~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~-~~~~~~~i~~~------------~~  234 (335)
T d2ozaa1         168 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKTRIRMG------------QY  234 (335)
T ss_dssp             CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC---------CCCSC------------SS
T ss_pred             CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHH-HHHHHHHHhcC------------CC
Confidence                               23578999999999999999999999975322111 00000000000            00


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..+.+          .....+.++.+++..|++.||++|||+.++++
T Consensus       235 ~~~~~----------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         235 EFPNP----------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             SCCTT----------HHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCCCc----------ccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            00000          00133556888999999999999999999975

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=7.8e-31  Score=218.09  Aligned_cols=159  Identities=25%  Similarity=0.309  Sum_probs=122.0

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+|+.||+|.+..                                            
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   83 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM   83 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEe
Confidence            457778899999999999999988999999995431                                            


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eecc----------
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGM----------  145 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~----------  145 (268)
                                          .....++.|++.|+.|||+.+   ++||||||+|||++.++..++ |||.          
T Consensus        84 E~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~  160 (316)
T d1fota_          84 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYT  160 (316)
T ss_dssp             CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCC
T ss_pred             eecCCccccccccccccccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEecccccc
Confidence                                344678899999999999988   999999999999999988887 4443          


Q ss_pred             --------------CCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcchhhhcCCCccch
Q 044875          146 --------------GNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDPLFVAGGEEEGE  211 (268)
Q Consensus       146 --------------~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~  211 (268)
                                    +..|+.++||||+||++|||++|+.||......  .+......... ..+.               
T Consensus       161 ~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~i~~~~~-~~p~---------------  222 (316)
T d1fota_         161 LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM--KTYEKILNAEL-RFPP---------------  222 (316)
T ss_dssp             CCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHHHHCCC-CCCT---------------
T ss_pred             ccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHH--HHHHHHHcCCC-CCCC---------------
Confidence                          346889999999999999999999999753221  11111111100 0111               


Q ss_pred             hhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCC-----ChHHHHH
Q 044875          212 KTAEENIKKGQIQESLITILKIRVVCSIKSPQERM-----DTSDVVN  253 (268)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RP-----s~~~v~~  253 (268)
                                   ..+.++.+++..||+.||.+||     |++++++
T Consensus       223 -------------~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         223 -------------FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             -------------TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             -------------CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence                         2234577889999999999996     8888874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.6e-30  Score=217.13  Aligned_cols=189  Identities=16%  Similarity=0.310  Sum_probs=121.9

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      .++|...+.||+|+||+||+|....+|+.||+|.+..                                           
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~   96 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT   96 (346)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             CCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccc
Confidence            3677788899999999999999988899999995432                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.|++.||.|||+.+   ++||||||+|||++.++..++ +|+.+     
T Consensus        97 ~~~lv~e~~~~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_          97 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             eEEEEEecccccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccceeccCC
Confidence                                    456789999999999999998   999999999999999888877 33322     


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc--cchhhhcchhh--
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP--DQISEVLDPLF--  202 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~--  202 (268)
                                          ..++.++||||+||+++|+++|+.||....... .+.........  ...........  
T Consensus       174 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         174 EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             ccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHH-HHHHHHhccCCCcHHHHhhhcchhhh
Confidence                                346789999999999999999999997542211 11111111110  01100000000  


Q ss_pred             ---hcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH--HHHHh
Q 044875          203 ---VAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN--NLQTV  258 (268)
Q Consensus       203 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~--~L~~l  258 (268)
                         ........ ...     ..........+.+++..|++.||++|||+.|+++  +++.+
T Consensus       253 ~~~~~~~~~~~-~~~-----~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~  307 (346)
T d1cm8a_         253 NYMKGLPELEK-KDF-----ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESL  307 (346)
T ss_dssp             HHHHHSCCCCC-CCG-----GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred             hhhccCCcccc-cch-----HHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcC
Confidence               00000000 000     0000122345678999999999999999999986  34443

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=1.3e-30  Score=214.80  Aligned_cols=174  Identities=17%  Similarity=0.166  Sum_probs=128.1

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||.||+|+...+++.||+|.++.                                            
T Consensus         5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~   84 (293)
T d1csna_           5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG   84 (293)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC
T ss_pred             CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC
Confidence            578888999999999999999988999999994322                                            


Q ss_pred             ----------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCC-----Cceee-eeccC--------
Q 044875           97 ----------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDND-----MTTHV-EYGMG--------  146 (268)
Q Consensus        97 ----------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~-----~~~~i-e~~~~--------  146 (268)
                                      .....++.+++.||.|||+.+   ++||||||+||+++.+     ...++ |||.+        
T Consensus        85 ~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~  161 (293)
T d1csna_          85 PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT  161 (293)
T ss_dssp             CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred             CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeEEcccCcc
Confidence                            456789999999999999988   9999999999999752     23343 44432        


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccc-hhh-HhhhhCccchhhhc
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLG-LHN-FVKMAVPDQISEVL  198 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~-~~~-~~~~~~~~~~~~~~  198 (268)
                                                ..++.++||||||+++||+++|+.||......... ... ...........+. 
T Consensus       162 ~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l-  240 (293)
T d1csna_         162 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLREL-  240 (293)
T ss_dssp             CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHH-
T ss_pred             ccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHh-
Confidence                                      34778899999999999999999999753322111 000 1010000001110 


Q ss_pred             chhhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHHHhHHHH
Q 044875          199 DPLFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVNNLQTVKSTL  262 (268)
Q Consensus       199 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~~L~~l~~~~  262 (268)
                                              ....+.++.+++..||+.+|++||+.+.+.+.|+++.+..
T Consensus       241 ------------------------~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         241 ------------------------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             ------------------------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ------------------------cCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence                                    0123456888999999999999999999999988876543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.96  E-value=1.8e-30  Score=217.48  Aligned_cols=190  Identities=19%  Similarity=0.265  Sum_probs=125.4

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|+...+++.||+|.++.                                            
T Consensus        35 d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~  114 (328)
T d3bqca1          35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHV  114 (328)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeec
Confidence            568888899999999999999988999999994433                                            


Q ss_pred             --------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCC-ceee-eeccC--------------
Q 044875           97 --------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDM-TTHV-EYGMG--------------  146 (268)
Q Consensus        97 --------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~-~~~i-e~~~~--------------  146 (268)
                                    .....++.|++.||.|||+.+   |+||||||+|||++.+. ..++ |||.+              
T Consensus       115 ~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  191 (328)
T d3bqca1         115 NNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVA  191 (328)
T ss_dssp             CSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCS
T ss_pred             CCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceeccCCCccccccc
Confidence                          456789999999999999998   99999999999998654 3444 55533              


Q ss_pred             -------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhh-------cchhhhcCC
Q 044875          147 -------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEV-------LDPLFVAGG  206 (268)
Q Consensus       147 -------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~~~~~  206 (268)
                                   ..++.++|+||+||+++|+++|+.||...................+.....       .++......
T Consensus       192 t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~  271 (328)
T d3bqca1         192 SRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDIL  271 (328)
T ss_dssp             CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTC
T ss_pred             CccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhc
Confidence                         236889999999999999999999997543321111111111110000000       000000000


Q ss_pred             CccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          207 EEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ........+.............++.+++..|++.||++|||++|+++
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         272 GRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000000001111111123456788999999999999999999975

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-30  Score=215.35  Aligned_cols=163  Identities=20%  Similarity=0.260  Sum_probs=119.2

Q ss_pred             CCCCcCCcccCCCcceEEEEEe---cCCCeEEEEeecCc-----------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGIL---DPDQTVVSVRDFKP-----------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~---~~~~~~vavK~l~~-----------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|..   ..+|+.||+|.+..                                         
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~  103 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK  103 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCc
Confidence            5688889999999999999986   34689999995431                                         


Q ss_pred             -------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC----
Q 044875           97 -------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG----  146 (268)
Q Consensus        97 -------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~----  146 (268)
                                               .....++.|++.|+.|+|+.+   ++||||||+||+++.++..++ |||.+    
T Consensus       104 ~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~  180 (322)
T d1vzoa_         104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKEFV  180 (322)
T ss_dssp             EEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             eeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchhhhc
Confidence                                     345678899999999999988   999999999999999988877 44422    


Q ss_pred             --------------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCccchhhhcch
Q 044875          147 --------------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVPDQISEVLDP  200 (268)
Q Consensus       147 --------------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  200 (268)
                                                ..++.++||||+||++|||++|+.||........ .............      
T Consensus       181 ~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~~~~~------  253 (322)
T d1vzoa_         181 ADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSEP------  253 (322)
T ss_dssp             GGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHCCC------
T ss_pred             ccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcccCCC------
Confidence                                      2357789999999999999999999975432221 1111111100000      


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMD-----TSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs-----~~~v~~  253 (268)
                          .                .+...+.++.+++..||+.||++|||     ++|+++
T Consensus       254 ----~----------------~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         254 ----P----------------YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             ----C----------------CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             ----C----------------CcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                0                00133456888999999999999995     677764

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-30  Score=219.28  Aligned_cols=185  Identities=16%  Similarity=0.325  Sum_probs=124.1

Q ss_pred             hCCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc-------------------------------------------
Q 044875           60 TGGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP-------------------------------------------   96 (268)
Q Consensus        60 ~~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~-------------------------------------------   96 (268)
                      +++|...+.||+|+||+||+|....+|+.||||.+..                                           
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~   96 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN   96 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCC
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCc
Confidence            4678888999999999999999988999999995432                                           


Q ss_pred             ------------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-eeccC-----
Q 044875           97 ------------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-EYGMG-----  146 (268)
Q Consensus        97 ------------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-e~~~~-----  146 (268)
                                              .....++.|++.||.|||+.+   ++||||||+|||++.++..++ +++.+     
T Consensus        97 ~~~i~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~  173 (348)
T d2gfsa1          97 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDD  173 (348)
T ss_dssp             CCEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----CCTG
T ss_pred             eEEEEEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhcccCc
Confidence                                    456789999999999999998   999999999999999888777 23221     


Q ss_pred             --------------------CCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhC-cc-chhhhcch----
Q 044875          147 --------------------NQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAV-PD-QISEVLDP----  200 (268)
Q Consensus       147 --------------------~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~~~d~----  200 (268)
                                          ..++.++||||+||+++|+++|+.||........ ......... +. ........    
T Consensus       174 ~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~  252 (348)
T d2gfsa1         174 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKKISSESAR  252 (348)
T ss_dssp             GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTTCCCHHHH
T ss_pred             ccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHhhhccchhhh
Confidence                                3467899999999999999999999975322111 111111111 00 00000000    


Q ss_pred             hhhcCCCccchhhhHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          201 LFVAGGEEEGEKTAEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ................     ........+.+++..|++.||.+|||++|+++
T Consensus       253 ~~~~~~~~~~~~~~~~-----~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         253 NYIQSLTQMPKMNFAN-----VFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHTTSCCCCCCCHHH-----HSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhcccCCCcchhh-----hcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000000000000000     00122345778999999999999999999985

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.5e-29  Score=212.56  Aligned_cols=189  Identities=17%  Similarity=0.212  Sum_probs=125.7

Q ss_pred             CCCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc--------------------------------------------
Q 044875           61 GGFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP--------------------------------------------   96 (268)
Q Consensus        61 ~~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~--------------------------------------------   96 (268)
                      ++|...+.||+|+||+||+|....+|+.||||.+..                                            
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~   96 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQD   96 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCE
T ss_pred             CCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCce
Confidence            568888899999999999999988899999994431                                            


Q ss_pred             ----------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceee-------------
Q 044875           97 ----------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHV-------------  141 (268)
Q Consensus        97 ----------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~i-------------  141 (268)
                                            .....++.+++.||.|||+.+   ++||||||+|||++.+...++             
T Consensus        97 ~~iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~  173 (355)
T d2b1pa1          97 VYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF  173 (355)
T ss_dssp             EEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred             eEEEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhhcccccc
Confidence                                  456789999999999999998   999999999999998877766             


Q ss_pred             --------------eeccCCCcCccccEeechHHHHHHHhCCCCCCcccccccchhhHhhhhCc--cchhhhcchhh---
Q 044875          142 --------------EYGMGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEGLGLHNFVKMAVP--DQISEVLDPLF---  202 (268)
Q Consensus       142 --------------e~~~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~---  202 (268)
                                    |...+..++.++||||+||+++|+++|+.||...... ............  ...........   
T Consensus       174 ~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~  252 (355)
T d2b1pa1         174 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYI-DQWNKVIEQLGTPCPEFMKKLQPTVRNY  252 (355)
T ss_dssp             -------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHTTSCHHHHHH
T ss_pred             ccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHH-HHHHHHHHhccCCCHHHHHHhhhhHHHH
Confidence                          2233456889999999999999999999999743211 111111111100  00000000000   


Q ss_pred             -hcCCCc---cchhh-hHH--hhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          203 -VAGGEE---EGEKT-AEE--NIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       203 -~~~~~~---~~~~~-~~~--~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                       ......   ..+.. .+.  .............+.+++.+|++.||++|||++|+++
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         253 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence             000000   00000 000  0011112345667889999999999999999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.94  E-value=4.3e-28  Score=205.45  Aligned_cols=189  Identities=17%  Similarity=0.211  Sum_probs=121.6

Q ss_pred             CCCcCCcccCCCcceEEEEEecCCCeEEEEeecCc---------------------------------------------
Q 044875           62 GFSSANIIGAGSFGSVCKGILDPDQTVVSVRDFKP---------------------------------------------   96 (268)
Q Consensus        62 ~f~~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~---------------------------------------------   96 (268)
                      +|...++||+|+||+||+|+...+|+.||||.+..                                             
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~   93 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG   93 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeecc
Confidence            47778999999999999999988999999995432                                             


Q ss_pred             -------------------------------cchhhHHHHHHHHHHHHhh-cCCCCeeecCCCCCccccCCCCc------
Q 044875           97 -------------------------------CTRLSIAIDVASALEYLHH-HSEKPIVHCDSKPSNILLDNDMT------  138 (268)
Q Consensus        97 -------------------------------~~~~~i~~~v~~~l~yLh~-~~~~~i~h~dlk~~nill~~~~~------  138 (268)
                                                     .....++.+++.|+.|||+ .+   |+||||||+|||++.+..      
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~~~~  170 (362)
T d1q8ya_          94 PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPENLIQ  170 (362)
T ss_dssp             TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTTEEE
T ss_pred             ccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCcccccce
Confidence                                           2356789999999999998 66   999999999999975432      


Q ss_pred             eee-eec------------------------cCCCcCccccEeechHHHHHHHhCCCCCCcccccc-----cchhhHhhh
Q 044875          139 THV-EYG------------------------MGNQFSTNGDVYSYGKLLLEIFTGKRSTSDMFTEG-----LGLHNFVKM  188 (268)
Q Consensus       139 ~~i-e~~------------------------~~~~~~~~~Dv~s~G~vl~el~tg~~p~~~~~~~~-----~~~~~~~~~  188 (268)
                      .++ +|+                        ....++.++|+||+||+++|+++|+.||.......     ..+......
T Consensus       171 ~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~  250 (362)
T d1q8ya_         171 IKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIEL  250 (362)
T ss_dssp             EEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHH
T ss_pred             eeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHH
Confidence            122 222                        23457899999999999999999999987432211     011111111


Q ss_pred             hC--ccc-------hhhhcchhhh-cCCCcc-chhh-hHHhhhhhchHHHHHHHHHHHHHcCCCCCCCCCChHHHHH
Q 044875          189 AV--PDQ-------ISEVLDPLFV-AGGEEE-GEKT-AEENIKKGQIQESLITILKIRVVCSIKSPQERMDTSDVVN  253 (268)
Q Consensus       189 ~~--~~~-------~~~~~d~~~~-~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~RPs~~~v~~  253 (268)
                      ..  +..       .....+.... ...... .... ...............++.+++..|++.||.+|||++|+++
T Consensus       251 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         251 LGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            10  000       0111110000 000000 0000 0001122233567788999999999999999999999875

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.67  E-value=1.3e-17  Score=127.93  Aligned_cols=78  Identities=15%  Similarity=0.164  Sum_probs=66.4

Q ss_pred             cCCcccCCCcceEEEEEecCCCeEEEEeecCc------------------------------------------------
Q 044875           65 SANIIGAGSFGSVCKGILDPDQTVVSVRDFKP------------------------------------------------   96 (268)
Q Consensus        65 ~~~~lG~G~fg~Vy~g~~~~~~~~vavK~l~~------------------------------------------------   96 (268)
                      ..+.||+|+||.||+|... +|+.||||.+..                                                
T Consensus         4 vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~   82 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAW   82 (191)
T ss_dssp             EEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEE
T ss_pred             hCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEe
Confidence            3578999999999999986 789999994321                                                


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhhcCCCCeeecCCCCCccccCCCCceeeeeccC
Q 044875           97 --------------------CTRLSIAIDVASALEYLHHHSEKPIVHCDSKPSNILLDNDMTTHVEYGMG  146 (268)
Q Consensus        97 --------------------~~~~~i~~~v~~~l~yLh~~~~~~i~h~dlk~~nill~~~~~~~ie~~~~  146 (268)
                                          .....++.+++.++.|||..+   ++||||||+|||++.+....+|||.+
T Consensus        83 ~~~~lvme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~~~~liDFG~a  149 (191)
T d1zara2          83 EGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEEGIWIIDFPQS  149 (191)
T ss_dssp             ETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETTEEEECCCTTC
T ss_pred             cCCEEEEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCCCEEEEECCCc
Confidence                                345679999999999999988   99999999999999877666688865

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=87.27  E-value=0.66  Score=37.27  Aligned_cols=36  Identities=14%  Similarity=0.138  Sum_probs=26.1

Q ss_pred             CCeeecCCCCCccccCCCCceeeeeccCCCcCcccc
Q 044875          119 KPIVHCDSKPSNILLDNDMTTHVEYGMGNQFSTNGD  154 (268)
Q Consensus       119 ~~i~h~dlk~~nill~~~~~~~ie~~~~~~~~~~~D  154 (268)
                      ..++|+|+.+.||+++.+....+|+..+..-...-|
T Consensus       223 ~~LiHGDl~~gNIlv~~~~~~vID~E~a~~G~~~~D  258 (392)
T d2pula1         223 ETLIHGDLHTGSIFASEHETKVIDPEFAFYGPIGFD  258 (392)
T ss_dssp             CEEECSCCCGGGEEECSSCEEECCCTTCEEECTHHH
T ss_pred             cceeccCCcCCceeEcCCceEEechhhcccCCHHHH
Confidence            348999999999999988766666665543344444

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=81.89  E-value=1.6  Score=32.21  Aligned_cols=34  Identities=21%  Similarity=0.294  Sum_probs=24.3

Q ss_pred             eeecCCCCCccccCCCCce-eeeeccCCCcCcccc
Q 044875          121 IVHCDSKPSNILLDNDMTT-HVEYGMGNQFSTNGD  154 (268)
Q Consensus       121 i~h~dlk~~nill~~~~~~-~ie~~~~~~~~~~~D  154 (268)
                      ++|+|+.+.|++++.+... .+|+..........|
T Consensus       185 l~HgD~~~~Nil~~~~~~~~lIDwe~a~~g~~~~D  219 (263)
T d1j7la_         185 FSHGDLGDSNIFVKDGKVSGFIDLGRSGRADKWYD  219 (263)
T ss_dssp             EECSCCCTTSEEEETTEEEEECCCTTCEEEEHHHH
T ss_pred             EEEeeccCcceeecCCceEEEeechhcccCCHHHH
Confidence            6899999999999877644 557766654444444

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.00  E-value=2.7  Score=31.98  Aligned_cols=46  Identities=13%  Similarity=0.062  Sum_probs=29.6

Q ss_pred             CCeeecCCCCCccccCCCCc-eeeeeccCCCcCccccEeechHHHHHHHh
Q 044875          119 KPIVHCDSKPSNILLDNDMT-THVEYGMGNQFSTNGDVYSYGKLLLEIFT  167 (268)
Q Consensus       119 ~~i~h~dlk~~nill~~~~~-~~ie~~~~~~~~~~~Dv~s~G~vl~el~t  167 (268)
                      ..++|+|+.+.|++++.+.. ..+||+....-....|   +++.+...+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~~~~~~D---LAi~~~~~~~  229 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFACNDLLAYD---VSICLNAWCF  229 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCEEEEHHHH---HHHHHHHHSB
T ss_pred             cccccCCcchhhhhcccccceeEecccccccchhhhh---HHHHHHHHhh
Confidence            44899999999999998764 3457776643222222   3555555443