Query 044877
Match_columns 244
No_of_seqs 155 out of 186
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 13:13:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044877.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044877hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fm0_A Protein CIAO1; WDR39,SG 99.4 3.4E-12 1.2E-16 111.8 15.3 132 1-176 1-136 (345)
2 2ynn_A Coatomer subunit beta'; 99.4 2.6E-12 9E-17 110.4 12.7 113 31-176 14-128 (304)
3 4h5i_A Guanine nucleotide-exch 99.4 8.8E-13 3E-17 117.5 9.9 71 30-100 269-341 (365)
4 3ow8_A WD repeat-containing pr 99.4 5.1E-12 1.7E-16 110.4 14.5 112 30-174 206-319 (321)
5 4gqb_B Methylosome protein 50; 99.4 3.7E-12 1.3E-16 113.5 13.4 116 30-176 82-201 (344)
6 3ow8_A WD repeat-containing pr 99.4 6.5E-12 2.2E-16 109.7 14.5 114 30-176 164-279 (321)
7 3lrv_A PRE-mRNA-splicing facto 99.4 6.7E-12 2.3E-16 109.1 14.5 121 30-177 170-293 (343)
8 1vyh_C Platelet-activating fac 99.4 5.1E-12 1.8E-16 113.7 14.0 114 30-176 108-223 (410)
9 2ymu_A WD-40 repeat protein; u 99.4 6E-12 2E-16 114.9 13.7 112 30-176 16-129 (577)
10 2ynn_A Coatomer subunit beta'; 99.4 6.1E-12 2.1E-16 108.1 13.0 117 29-176 54-172 (304)
11 3f3f_A Nucleoporin SEH1; struc 99.3 2.5E-11 8.6E-16 100.4 14.2 127 30-177 11-144 (351)
12 4ery_A WD repeat-containing pr 99.3 2.4E-11 8.1E-16 103.2 14.3 114 30-176 23-138 (312)
13 2ymu_A WD-40 repeat protein; u 99.3 1E-11 3.5E-16 113.3 12.3 110 29-173 466-577 (577)
14 4gqb_B Methylosome protein 50; 99.3 3.3E-11 1.1E-15 107.3 14.3 117 30-176 127-246 (344)
15 3mmy_A MRNA export factor; mRN 99.3 3E-11 1E-15 101.9 12.8 116 30-176 39-160 (368)
16 2xzm_R RACK1; ribosome, transl 99.3 8.6E-11 2.9E-15 102.3 15.5 70 31-101 77-148 (343)
17 1vyh_C Platelet-activating fac 99.3 3.8E-11 1.3E-15 108.0 13.6 113 31-176 151-265 (410)
18 3frx_A Guanine nucleotide-bind 99.3 5.1E-11 1.8E-15 103.2 13.8 118 30-176 65-185 (319)
19 2hes_X YDR267CP; beta-propelle 99.3 5.3E-11 1.8E-15 103.6 13.9 118 30-175 58-183 (330)
20 4e54_B DNA damage-binding prot 99.3 5E-11 1.7E-15 107.3 14.1 115 31-175 120-239 (435)
21 3lrv_A PRE-mRNA-splicing facto 99.3 8.4E-11 2.9E-15 102.1 14.7 116 31-177 126-245 (343)
22 4ery_A WD repeat-containing pr 99.3 7.4E-11 2.5E-15 100.1 13.9 116 30-176 149-268 (312)
23 1got_B GT-beta; complex (GTP-b 99.3 7.6E-11 2.6E-15 102.8 14.2 115 30-176 184-301 (340)
24 1got_B GT-beta; complex (GTP-b 99.3 6.1E-11 2.1E-15 103.4 13.5 113 31-176 144-257 (340)
25 4aow_A Guanine nucleotide-bind 99.3 5.6E-11 1.9E-15 100.0 12.8 120 30-176 215-337 (340)
26 3fm0_A Protein CIAO1; WDR39,SG 99.3 7.6E-11 2.6E-15 103.2 13.8 118 30-176 61-181 (345)
27 4g56_B MGC81050 protein; prote 99.3 8E-11 2.7E-15 104.3 14.0 116 30-176 94-213 (357)
28 2hes_X YDR267CP; beta-propelle 99.3 1E-10 3.5E-15 101.8 14.3 119 30-176 107-230 (330)
29 2pm7_B Protein transport prote 99.3 8.9E-11 3E-15 100.5 13.7 117 31-176 10-132 (297)
30 2xzm_R RACK1; ribosome, transl 99.2 1E-10 3.4E-15 101.9 14.2 113 31-175 22-148 (343)
31 4g56_B MGC81050 protein; prote 99.2 7.7E-11 2.6E-15 104.4 13.4 114 30-176 226-343 (357)
32 3jrp_A Fusion protein of prote 99.2 1.4E-10 4.8E-15 98.5 13.6 119 30-177 11-135 (379)
33 3frx_A Guanine nucleotide-bind 99.2 1.3E-10 4.3E-15 100.8 13.5 121 29-176 195-317 (319)
34 3zwl_B Eukaryotic translation 99.2 1.8E-10 6.3E-15 97.1 14.1 114 30-177 32-152 (369)
35 2oaj_A Protein SNI1; WD40 repe 99.2 3.2E-10 1.1E-14 114.2 18.3 121 31-174 489-659 (902)
36 4aow_A Guanine nucleotide-bind 99.2 1.7E-10 5.8E-15 97.1 13.8 115 30-176 38-159 (340)
37 1erj_A Transcriptional repress 99.2 2.1E-10 7.2E-15 102.1 15.1 69 32-101 125-195 (393)
38 3dwl_C Actin-related protein 2 99.2 2.9E-10 1E-14 98.1 15.5 133 29-177 99-237 (377)
39 1nr0_A Actin interacting prote 99.2 1.7E-10 5.8E-15 109.2 14.9 139 31-176 191-355 (611)
40 3odt_A Protein DOA1; ubiquitin 99.2 1.3E-10 4.3E-15 96.4 12.4 115 29-177 183-297 (313)
41 3iz6_a 40S ribosomal protein R 99.2 5.1E-11 1.7E-15 105.7 10.3 122 30-176 66-189 (380)
42 3vu4_A KMHSV2; beta-propeller 99.2 3.3E-10 1.1E-14 100.0 15.2 72 30-101 195-270 (355)
43 1k8k_C P40, ARP2/3 complex 41 99.2 8.1E-10 2.8E-14 94.1 17.1 135 28-176 94-233 (372)
44 3k26_A Polycomb protein EED; W 99.2 2.5E-10 8.5E-15 96.5 13.8 118 29-176 68-192 (366)
45 3vl1_A 26S proteasome regulato 99.2 3.2E-10 1.1E-14 99.0 14.8 111 33-176 100-212 (420)
46 1nr0_A Actin interacting prote 99.2 2.2E-10 7.5E-15 108.5 14.9 121 30-176 147-270 (611)
47 1pgu_A Actin interacting prote 99.2 2E-10 6.9E-15 104.5 14.0 114 29-175 487-613 (615)
48 3iz6_a 40S ribosomal protein R 99.2 2.3E-10 8E-15 101.4 14.1 120 30-175 205-328 (380)
49 3bg1_A Protein SEC13 homolog; 99.2 8E-11 2.7E-15 101.9 10.7 118 31-176 14-136 (316)
50 3dwl_C Actin-related protein 2 99.2 3.3E-11 1.1E-15 104.1 7.8 117 31-177 12-132 (377)
51 4ggc_A P55CDC, cell division c 99.2 3.7E-10 1.3E-14 94.1 13.9 67 33-100 28-96 (318)
52 1erj_A Transcriptional repress 99.2 3.2E-10 1.1E-14 101.0 14.2 129 28-176 204-341 (393)
53 2pbi_B Guanine nucleotide-bind 99.2 2.4E-10 8.3E-15 100.8 13.3 120 30-176 64-185 (354)
54 1k8k_C P40, ARP2/3 complex 41 99.2 2.3E-10 8E-15 97.4 12.5 116 30-176 8-127 (372)
55 4h5i_A Guanine nucleotide-exch 99.2 5.4E-10 1.9E-14 99.4 15.4 113 33-177 136-255 (365)
56 3dw8_B Serine/threonine-protei 99.2 3.8E-10 1.3E-14 99.1 13.4 123 31-176 94-258 (447)
57 3vl1_A 26S proteasome regulato 99.2 3.2E-10 1.1E-14 99.1 12.8 137 29-176 138-278 (420)
58 2pbi_B Guanine nucleotide-bind 99.2 4.6E-10 1.6E-14 99.1 13.8 113 31-176 155-271 (354)
59 2aq5_A Coronin-1A; WD40 repeat 99.2 4.9E-10 1.7E-14 98.9 13.8 114 30-176 81-207 (402)
60 4a11_B DNA excision repair pro 99.1 1.5E-09 5.2E-14 93.0 16.2 73 29-101 185-275 (408)
61 1sq9_A Antiviral protein SKI8; 99.1 4.8E-10 1.6E-14 96.9 13.1 123 30-176 186-322 (397)
62 3dw8_B Serine/threonine-protei 99.1 4.5E-10 1.5E-14 98.6 13.1 85 18-102 9-126 (447)
63 1gxr_A ESG1, transducin-like e 99.1 5.8E-10 2E-14 93.1 13.2 119 27-176 48-172 (337)
64 3f3f_A Nucleoporin SEH1; struc 99.1 9.9E-10 3.4E-14 90.8 14.3 72 29-101 56-142 (351)
65 1sq9_A Antiviral protein SKI8; 99.1 4.9E-10 1.7E-14 96.8 13.0 71 30-101 233-321 (397)
66 3i2n_A WD repeat-containing pr 99.1 5.5E-10 1.9E-14 94.3 12.9 134 29-177 208-354 (357)
67 3dm0_A Maltose-binding peripla 99.1 4.7E-10 1.6E-14 107.1 13.9 118 31-176 431-550 (694)
68 3k26_A Polycomb protein EED; W 99.1 5.2E-10 1.8E-14 94.5 12.4 137 29-177 114-261 (366)
69 3mkq_A Coatomer beta'-subunit; 99.1 4.4E-10 1.5E-14 106.8 13.0 114 30-176 13-128 (814)
70 1gxr_A ESG1, transducin-like e 99.1 1.5E-09 5.1E-14 90.6 14.7 117 28-176 95-214 (337)
71 3gre_A Serine/threonine-protei 99.1 2.1E-10 7.1E-15 101.6 9.7 134 30-177 214-360 (437)
72 3sfz_A APAF-1, apoptotic pepti 99.1 6.8E-10 2.3E-14 111.4 14.5 116 30-176 615-732 (1249)
73 4e54_B DNA damage-binding prot 99.1 3.6E-10 1.2E-14 101.7 11.0 115 31-176 210-327 (435)
74 1r5m_A SIR4-interacting protei 99.1 5.4E-10 1.9E-14 96.0 11.6 133 29-175 288-424 (425)
75 2pm9_A Protein WEB1, protein t 99.1 9E-10 3.1E-14 95.5 12.3 128 27-176 64-197 (416)
76 1r5m_A SIR4-interacting protei 99.1 1.9E-09 6.6E-14 92.6 14.2 115 30-178 247-363 (425)
77 2aq5_A Coronin-1A; WD40 repeat 99.1 1.2E-09 4.2E-14 96.3 13.3 72 30-101 131-206 (402)
78 3zwl_B Eukaryotic translation 99.1 2.2E-09 7.5E-14 90.5 14.2 115 30-178 218-348 (369)
79 2vdu_B TRNA (guanine-N(7)-)-me 99.1 4.1E-09 1.4E-13 95.0 16.8 71 30-101 195-270 (450)
80 3dm0_A Maltose-binding peripla 99.1 1E-09 3.5E-14 104.8 13.3 114 30-175 382-502 (694)
81 3jrp_A Fusion protein of prote 99.1 2E-09 6.9E-14 91.3 13.7 121 29-176 146-287 (379)
82 2pm9_A Protein WEB1, protein t 99.1 9.7E-10 3.3E-14 95.3 11.7 118 30-178 214-339 (416)
83 3gre_A Serine/threonine-protei 99.1 1.5E-09 5E-14 96.1 12.6 131 31-176 64-201 (437)
84 2xyi_A Probable histone-bindin 99.1 1.4E-09 4.8E-14 97.9 12.7 134 29-181 276-415 (430)
85 3odt_A Protein DOA1; ubiquitin 99.1 1.1E-09 3.9E-14 90.7 11.1 111 30-173 18-130 (313)
86 3ei3_B DNA damage-binding prot 99.0 2.2E-09 7.6E-14 93.3 13.2 117 31-177 164-283 (383)
87 2j04_B YDR362CP, TAU91; beta p 99.0 5.4E-10 1.9E-14 106.6 10.0 116 31-176 267-386 (524)
88 2pm7_B Protein transport prote 99.0 3.5E-09 1.2E-13 90.5 14.0 122 30-176 99-238 (297)
89 3vu4_A KMHSV2; beta-propeller 99.0 2.7E-09 9.2E-14 94.1 13.7 111 33-177 140-272 (355)
90 4a11_B DNA excision repair pro 99.0 3.1E-09 1E-13 91.1 13.6 117 30-176 43-175 (408)
91 3mkq_A Coatomer beta'-subunit; 99.0 1.4E-09 4.9E-14 103.3 12.5 117 29-176 54-172 (814)
92 4gga_A P55CDC, cell division c 99.0 3.2E-09 1.1E-13 94.9 14.1 108 34-176 109-218 (420)
93 4gq1_A NUP37; propeller, trans 99.0 1.3E-09 4.5E-14 97.5 11.5 137 30-177 136-287 (393)
94 1yfq_A Cell cycle arrest prote 99.0 1.9E-09 6.4E-14 91.0 11.2 112 30-176 11-131 (342)
95 3ei3_B DNA damage-binding prot 99.0 3.6E-09 1.2E-13 92.0 12.9 116 30-175 73-193 (383)
96 3v7d_B Cell division control p 99.0 5.6E-09 1.9E-13 93.1 13.6 131 29-176 161-299 (464)
97 3i2n_A WD repeat-containing pr 99.0 2.6E-09 9E-14 90.1 10.1 118 30-176 18-148 (357)
98 3v7d_B Cell division control p 99.0 8.5E-09 2.9E-13 91.9 13.9 112 33-177 125-237 (464)
99 3bg1_A Protein SEC13 homolog; 99.0 1.3E-08 4.4E-13 88.0 14.2 123 30-177 103-248 (316)
100 1pgu_A Actin interacting prote 99.0 1.1E-08 3.8E-13 92.9 14.5 120 29-176 445-572 (615)
101 4gq1_A NUP37; propeller, trans 99.0 1.9E-09 6.5E-14 96.4 9.2 109 37-176 96-218 (393)
102 3jro_A Fusion protein of prote 98.9 5.1E-09 1.7E-13 102.3 12.8 119 30-177 9-133 (753)
103 2vdu_B TRNA (guanine-N(7)-)-me 98.9 7E-09 2.4E-13 93.5 12.7 114 31-176 150-271 (450)
104 2j04_A TAU60, YPL007P, hypothe 98.9 4.1E-09 1.4E-13 104.0 12.1 120 30-176 85-211 (588)
105 2oit_A Nucleoporin 214KDA; NH2 98.9 6.2E-09 2.1E-13 96.0 11.7 114 30-175 92-222 (434)
106 2oaj_A Protein SNI1; WD40 repe 98.9 8.7E-09 3E-13 103.8 13.8 116 25-176 12-129 (902)
107 4aez_A CDC20, WD repeat-contai 98.9 4.1E-08 1.4E-12 86.9 16.4 113 30-176 134-248 (401)
108 3mmy_A MRNA export factor; mRN 98.9 8.5E-09 2.9E-13 86.8 10.9 70 30-101 86-159 (368)
109 2xyi_A Probable histone-bindin 98.9 9.1E-09 3.1E-13 92.6 11.7 119 30-178 231-355 (430)
110 4aez_A CDC20, WD repeat-contai 98.9 1.9E-08 6.6E-13 89.0 13.4 116 29-176 258-380 (401)
111 4gga_A P55CDC, cell division c 98.9 3.5E-08 1.2E-12 88.1 15.0 115 29-177 275-396 (420)
112 3sfz_A APAF-1, apoptotic pepti 98.9 2E-08 6.9E-13 100.8 14.5 116 29-177 656-775 (1249)
113 1yfq_A Cell cycle arrest prote 98.9 2.8E-08 9.6E-13 83.8 12.9 132 27-176 147-282 (342)
114 4ggc_A P55CDC, cell division c 98.9 5E-09 1.7E-13 87.3 8.1 73 28-101 238-314 (318)
115 2j04_A TAU60, YPL007P, hypothe 98.9 2.4E-08 8.3E-13 98.6 14.2 68 32-100 131-209 (588)
116 2j04_B YDR362CP, TAU91; beta p 98.9 4.4E-09 1.5E-13 100.3 8.5 113 30-175 308-427 (524)
117 1p22_A F-BOX/WD-repeat protein 98.8 3.8E-08 1.3E-12 88.1 13.0 107 31-176 134-242 (435)
118 3jro_A Fusion protein of prote 98.8 4.2E-08 1.4E-12 95.9 12.7 121 30-176 53-189 (753)
119 1p22_A F-BOX/WD-repeat protein 98.8 4.9E-08 1.7E-12 87.4 11.8 119 31-178 297-416 (435)
120 2ovr_B FBW7, F-BOX/WD repeat p 98.8 1.3E-07 4.4E-12 84.4 14.1 65 33-101 122-187 (445)
121 2w18_A PALB2, fancn, partner a 98.7 6.1E-08 2.1E-12 90.5 11.4 114 33-176 181-314 (356)
122 2ovr_B FBW7, F-BOX/WD repeat p 98.7 2.2E-07 7.5E-12 83.0 13.8 20 157-176 329-348 (445)
123 2oit_A Nucleoporin 214KDA; NH2 98.7 1.2E-07 4.2E-12 87.3 11.8 71 30-101 149-222 (434)
124 1l0q_A Surface layer protein; 98.6 2.8E-07 9.7E-12 79.7 12.5 69 30-100 31-103 (391)
125 3bws_A Protein LP49; two-domai 98.6 3.8E-07 1.3E-11 80.0 12.4 68 32-100 171-241 (433)
126 2w18_A PALB2, fancn, partner a 98.6 1.1E-07 3.8E-12 88.7 9.1 56 44-100 298-355 (356)
127 1l0q_A Surface layer protein; 98.5 2.1E-06 7.2E-11 74.2 13.7 70 29-100 114-187 (391)
128 2ojh_A Uncharacterized protein 98.5 2.9E-06 1E-10 68.6 13.7 72 30-101 128-203 (297)
129 3bws_A Protein LP49; two-domai 98.5 8.3E-07 2.8E-11 77.9 10.7 72 29-100 121-198 (433)
130 2ecf_A Dipeptidyl peptidase IV 98.5 9.4E-07 3.2E-11 83.8 11.5 70 30-100 36-136 (741)
131 2hqs_A Protein TOLB; TOLB, PAL 98.5 3E-06 1E-10 76.8 14.2 69 30-100 178-254 (415)
132 3u4y_A Uncharacterized protein 98.4 2.3E-06 7.9E-11 72.3 10.8 69 30-100 175-250 (331)
133 1xfd_A DIP, dipeptidyl aminope 98.4 8E-07 2.7E-11 83.9 8.3 67 33-100 19-98 (723)
134 2hqs_A Protein TOLB; TOLB, PAL 98.3 9.1E-06 3.1E-10 73.6 14.6 68 31-100 223-298 (415)
135 1ri6_A Putative isomerase YBHE 98.2 1E-05 3.5E-10 67.6 11.6 72 29-101 36-114 (343)
136 3vgz_A Uncharacterized protein 98.2 2.2E-05 7.4E-10 66.3 13.5 67 33-100 143-213 (353)
137 1k32_A Tricorn protease; prote 98.2 7.5E-06 2.6E-10 82.4 11.3 69 31-100 379-459 (1045)
138 2ecf_A Dipeptidyl peptidase IV 98.2 1.5E-05 5E-10 75.6 12.3 66 33-100 111-179 (741)
139 2ojh_A Uncharacterized protein 98.2 4.4E-05 1.5E-09 61.6 13.3 70 30-101 41-116 (297)
140 3u4y_A Uncharacterized protein 98.1 2E-05 6.9E-10 66.4 11.6 66 35-100 44-115 (331)
141 1jmx_B Amine dehydrogenase; ox 98.1 0.00014 4.7E-09 61.0 15.8 65 34-100 3-72 (349)
142 1ri6_A Putative isomerase YBHE 98.1 3.3E-05 1.1E-09 64.5 11.7 72 30-101 128-208 (343)
143 1nir_A Nitrite reductase; hemo 98.0 4.2E-05 1.4E-09 72.7 12.1 66 33-100 181-255 (543)
144 2z3z_A Dipeptidyl aminopeptida 98.0 3.2E-05 1.1E-09 73.1 10.4 68 31-101 82-149 (706)
145 1xfd_A DIP, dipeptidyl aminope 98.0 3.3E-05 1.1E-09 72.8 10.4 67 32-100 62-141 (723)
146 1z68_A Fibroblast activation p 98.0 2.2E-05 7.7E-10 74.5 9.1 66 33-100 62-137 (719)
147 3vgz_A Uncharacterized protein 98.0 0.00012 4.3E-09 61.6 12.8 68 32-100 90-171 (353)
148 1jof_A Carboxy-CIS,CIS-muconat 98.0 0.0011 3.9E-08 57.9 19.4 71 30-100 144-222 (365)
149 1z68_A Fibroblast activation p 97.9 2.1E-05 7.3E-10 74.6 8.7 65 35-100 20-97 (719)
150 1nir_A Nitrite reductase; hemo 97.9 5.1E-05 1.7E-09 72.1 10.7 64 35-100 142-207 (543)
151 3scy_A Hypothetical bacterial 97.9 0.00026 8.8E-09 61.0 13.9 71 31-101 211-290 (361)
152 1q7f_A NHL, brain tumor CG1071 97.9 0.00027 9.1E-09 58.9 13.3 67 32-100 165-236 (286)
153 1pby_B Quinohemoprotein amine 97.9 0.00015 5.2E-09 60.3 11.4 69 32-100 35-122 (337)
154 1pby_B Quinohemoprotein amine 97.8 4E-05 1.4E-09 63.8 7.6 64 33-100 243-308 (337)
155 3hfq_A Uncharacterized protein 97.8 0.00073 2.5E-08 57.7 15.2 69 33-101 143-217 (347)
156 2z3z_A Dipeptidyl aminopeptida 97.8 0.00018 6.3E-09 67.9 12.2 59 31-91 121-199 (706)
157 3scy_A Hypothetical bacterial 97.8 0.00065 2.2E-08 58.5 14.4 69 33-101 157-241 (361)
158 3hfq_A Uncharacterized protein 97.8 9.1E-05 3.1E-09 63.4 8.9 70 31-101 240-316 (347)
159 3o4h_A Acylamino-acid-releasin 97.8 8.8E-05 3E-09 68.9 9.4 65 34-100 153-225 (582)
160 1jmx_B Amine dehydrogenase; ox 97.7 8.2E-05 2.8E-09 62.4 7.4 65 32-100 256-323 (349)
161 1k32_A Tricorn protease; prote 97.6 0.0004 1.4E-08 70.0 12.2 66 32-100 339-407 (1045)
162 4a5s_A Dipeptidyl peptidase 4 97.6 0.0002 6.9E-09 69.3 9.0 65 33-100 19-99 (740)
163 2xdw_A Prolyl endopeptidase; a 97.5 0.00088 3E-08 64.4 12.2 59 32-92 126-190 (710)
164 2oiz_A Aromatic amine dehydrog 97.5 0.00032 1.1E-08 62.5 8.4 63 36-101 259-333 (361)
165 3pe7_A Oligogalacturonate lyas 97.4 0.00017 5.7E-09 62.2 5.7 68 33-101 38-110 (388)
166 2bkl_A Prolyl endopeptidase; m 97.3 0.0017 5.7E-08 62.4 11.9 59 32-92 122-187 (695)
167 3azo_A Aminopeptidase; POP fam 97.2 0.0015 5.1E-08 61.1 10.4 69 31-100 130-224 (662)
168 4a5s_A Dipeptidyl peptidase 4 97.2 0.0004 1.4E-08 67.2 6.4 66 33-100 64-139 (740)
169 1q7f_A NHL, brain tumor CG1071 97.2 0.0014 4.7E-08 54.6 8.7 69 32-101 208-279 (286)
170 2oiz_A Aromatic amine dehydrog 97.2 0.00039 1.3E-08 61.9 5.2 66 35-101 54-139 (361)
171 3o4h_A Acylamino-acid-releasin 97.1 0.00047 1.6E-08 64.0 5.6 68 31-100 195-274 (582)
172 2dg1_A DRP35, lactonase; beta 97.1 0.0021 7.3E-08 54.5 8.6 68 32-100 46-119 (333)
173 3no2_A Uncharacterized protein 97.0 0.006 2.1E-07 52.6 11.4 61 38-100 2-63 (276)
174 3fvz_A Peptidyl-glycine alpha- 96.9 0.0043 1.5E-07 53.7 9.7 72 29-100 22-119 (329)
175 3e5z_A Putative gluconolactona 96.9 0.017 5.9E-07 48.3 12.7 66 33-100 174-244 (296)
176 1qks_A Cytochrome CD1 nitrite 96.8 0.0023 8E-08 61.8 7.7 70 29-100 195-273 (567)
177 3no2_A Uncharacterized protein 96.8 0.011 3.7E-07 51.0 10.8 66 32-99 38-105 (276)
178 1jof_A Carboxy-CIS,CIS-muconat 96.8 0.0012 4E-08 57.9 4.6 70 32-101 255-340 (365)
179 3e5z_A Putative gluconolactona 96.7 0.0045 1.5E-07 52.0 8.0 79 14-100 16-97 (296)
180 3azo_A Aminopeptidase; POP fam 96.7 0.007 2.4E-07 56.6 9.9 69 31-99 188-271 (662)
181 1pjx_A Dfpase, DIISOPROPYLFLUO 96.5 0.0079 2.7E-07 50.0 7.9 67 34-100 21-99 (314)
182 2z2n_A Virginiamycin B lyase; 96.5 0.02 6.7E-07 46.8 10.0 69 31-100 15-85 (299)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 96.5 0.011 3.8E-07 49.1 8.5 68 33-101 228-298 (314)
184 2xdw_A Prolyl endopeptidase; a 96.4 0.011 3.8E-07 56.7 9.0 69 33-101 173-267 (710)
185 3dsm_A Uncharacterized protein 96.4 0.062 2.1E-06 46.6 13.1 67 33-100 174-251 (328)
186 2gop_A Trilobed protease; beta 96.3 0.0062 2.1E-07 51.6 5.9 57 32-91 60-122 (347)
187 3c5m_A Oligogalacturonate lyas 96.2 0.0051 1.8E-07 52.5 5.3 67 33-100 38-109 (396)
188 2dg1_A DRP35, lactonase; beta 96.2 0.088 3E-06 44.4 13.0 62 30-92 86-154 (333)
189 1rwi_B Serine/threonine-protei 96.2 0.02 7E-07 46.6 8.4 67 32-100 25-94 (270)
190 3fvz_A Peptidyl-glycine alpha- 96.1 0.1 3.5E-06 45.0 13.2 67 33-99 93-172 (329)
191 1xip_A Nucleoporin NUP159; bet 95.9 0.01 3.5E-07 55.3 6.2 58 30-89 162-230 (388)
192 2bkl_A Prolyl endopeptidase; m 95.9 0.016 5.4E-07 55.6 7.5 69 31-99 168-258 (695)
193 1rwi_B Serine/threonine-protei 95.9 0.047 1.6E-06 44.4 9.3 69 31-101 192-263 (270)
194 2z2n_A Virginiamycin B lyase; 95.9 0.064 2.2E-06 43.7 10.1 68 31-100 225-293 (299)
195 3pe7_A Oligogalacturonate lyas 95.8 0.015 5E-07 49.9 6.2 68 32-100 189-271 (388)
196 2qc5_A Streptogramin B lactona 95.8 0.059 2E-06 43.9 9.6 69 31-100 62-132 (300)
197 2mad_H Methylamine dehydrogena 95.8 0.023 7.7E-07 51.4 7.6 65 35-99 70-154 (373)
198 3sjl_D Methylamine dehydrogena 95.7 0.01 3.5E-07 55.4 5.1 67 35-101 82-168 (386)
199 2mad_H Methylamine dehydrogena 95.6 0.029 9.9E-07 50.7 7.7 65 35-101 271-349 (373)
200 3c5m_A Oligogalacturonate lyas 95.4 0.022 7.5E-07 48.5 5.9 69 31-100 188-271 (396)
201 2qc5_A Streptogramin B lactona 95.4 0.096 3.3E-06 42.7 9.6 70 30-100 19-90 (300)
202 1mda_H Methylamine dehydrogena 95.4 0.0072 2.5E-07 55.6 3.0 66 35-100 69-156 (368)
203 1yr2_A Prolyl oligopeptidase; 95.4 0.15 5.1E-06 49.3 12.4 57 32-91 164-226 (741)
204 3dr2_A Exported gluconolactona 94.9 0.075 2.6E-06 45.2 7.7 62 34-99 242-303 (305)
205 1qks_A Cytochrome CD1 nitrite 94.7 0.051 1.7E-06 52.5 6.9 61 38-100 163-225 (567)
206 3g4e_A Regucalcin; six bladed 94.7 0.34 1.2E-05 41.0 11.2 67 31-100 98-178 (297)
207 3c75_H MADH, methylamine dehyd 94.7 0.024 8.1E-07 53.4 4.2 67 35-101 122-208 (426)
208 1mda_H Methylamine dehydrogena 94.3 0.042 1.4E-06 50.4 4.9 64 36-101 269-345 (368)
209 1yr2_A Prolyl oligopeptidase; 93.9 0.15 5E-06 49.4 8.1 69 33-101 211-302 (741)
210 3v9f_A Two-component system se 93.7 2.9 0.0001 40.4 17.0 70 30-100 449-522 (781)
211 1fwx_A Nitrous oxide reductase 93.7 0.33 1.1E-05 48.0 10.3 49 52-101 255-307 (595)
212 3iuj_A Prolyl endopeptidase; h 93.6 0.21 7.3E-06 48.1 8.7 58 32-92 130-193 (693)
213 1xip_A Nucleoporin NUP159; bet 93.5 0.13 4.6E-06 47.7 6.8 64 33-101 90-154 (388)
214 3hrp_A Uncharacterized protein 93.5 0.19 6.4E-06 45.7 7.7 65 33-100 133-201 (409)
215 3g4e_A Regucalcin; six bladed 93.3 0.41 1.4E-05 40.5 9.0 63 34-100 16-80 (297)
216 4a2l_A BT_4663, two-component 93.3 4 0.00014 39.6 17.1 68 30-100 451-524 (795)
217 2ghs_A AGR_C_1268P; regucalcin 93.2 0.26 8.8E-06 42.6 7.8 60 31-91 90-152 (326)
218 3dsm_A Uncharacterized protein 93.0 0.31 1.1E-05 42.1 7.9 67 32-100 226-300 (328)
219 3sjl_D Methylamine dehydrogena 92.9 0.087 3E-06 49.1 4.6 63 36-101 38-117 (386)
220 2ghs_A AGR_C_1268P; regucalcin 92.9 0.26 8.9E-06 42.6 7.3 63 34-100 52-116 (326)
221 3c75_H MADH, methylamine dehyd 92.8 0.063 2.2E-06 50.4 3.4 64 36-101 324-401 (426)
222 2p4o_A Hypothetical protein; p 92.4 0.48 1.6E-05 40.4 8.3 74 23-99 24-101 (306)
223 3iuj_A Prolyl endopeptidase; h 92.3 0.21 7.2E-06 48.1 6.6 67 33-100 177-266 (693)
224 4a2l_A BT_4663, two-component 92.2 7.3 0.00025 37.7 17.3 72 29-100 355-434 (795)
225 3hrp_A Uncharacterized protein 91.6 0.45 1.5E-05 43.2 7.5 69 31-100 219-296 (409)
226 2gop_A Trilobed protease; beta 91.6 0.41 1.4E-05 40.2 6.7 57 39-101 223-290 (347)
227 2hz6_A Endoplasmic reticulum t 90.8 0.1 3.5E-06 46.5 2.4 58 41-101 9-67 (369)
228 3v9f_A Two-component system se 90.8 10 0.00036 36.5 16.7 69 30-100 406-476 (781)
229 3hxj_A Pyrrolo-quinoline quino 90.8 0.5 1.7E-05 39.2 6.5 67 33-101 257-323 (330)
230 3dr2_A Exported gluconolactona 90.6 0.72 2.4E-05 39.0 7.4 64 34-100 48-114 (305)
231 2fp8_A Strictosidine synthase; 90.0 0.75 2.6E-05 39.2 7.0 66 33-100 128-214 (322)
232 2ece_A 462AA long hypothetical 89.9 0.35 1.2E-05 46.5 5.3 58 32-91 322-399 (462)
233 2qe8_A Uncharacterized protein 89.9 1.2 4E-05 38.6 8.3 67 33-100 122-224 (343)
234 2ism_A Putative oxidoreductase 89.4 1.6 5.5E-05 38.7 9.0 56 33-90 33-95 (352)
235 3hxj_A Pyrrolo-quinoline quino 88.9 0.79 2.7E-05 38.0 6.2 18 157-174 265-282 (330)
236 3sbq_A Nitrous-oxide reductase 88.4 0.94 3.2E-05 45.2 7.3 86 71-178 321-410 (638)
237 2qe8_A Uncharacterized protein 88.4 0.88 3E-05 39.4 6.4 58 34-92 251-310 (343)
238 2fp8_A Strictosidine synthase; 88.2 0.9 3.1E-05 38.7 6.3 66 34-100 22-108 (322)
239 3amr_A 3-phytase; beta-propell 86.8 2 6.9E-05 39.8 8.2 69 33-101 183-262 (355)
240 3tc9_A Hypothetical hydrolase; 86.8 2 6.8E-05 39.4 8.1 67 33-100 228-299 (430)
241 4hw6_A Hypothetical protein, I 86.8 1.5 5.1E-05 40.4 7.3 67 33-100 230-302 (433)
242 1fwx_A Nitrous oxide reductase 85.8 2.4 8.4E-05 41.8 8.6 65 33-100 279-359 (595)
243 3q7m_A Lipoprotein YFGL, BAMB; 83.6 12 0.00042 31.9 11.2 60 41-100 53-120 (376)
244 2p4o_A Hypothetical protein; p 83.1 3.3 0.00011 35.1 7.3 58 34-92 215-277 (306)
245 2xe4_A Oligopeptidase B; hydro 81.6 2.4 8.1E-05 41.6 6.5 68 33-100 223-302 (751)
246 3q7m_A Lipoprotein YFGL, BAMB; 80.7 1.4 4.8E-05 38.0 4.1 58 41-99 318-375 (376)
247 3a9g_A Putative uncharacterize 80.4 4.9 0.00017 35.8 7.7 57 33-91 31-95 (354)
248 1yiq_A Quinohemoprotein alcoho 80.3 2 6.7E-05 42.0 5.4 53 36-91 481-536 (689)
249 3tc9_A Hypothetical hydrolase; 78.8 2.4 8.2E-05 38.8 5.2 56 34-91 140-197 (430)
250 2iwa_A Glutamine cyclotransfer 78.3 8 0.00027 33.9 8.2 79 18-100 6-93 (266)
251 1npe_A Nidogen, entactin; glyc 78.1 10 0.00036 30.9 8.5 66 33-100 38-108 (267)
252 1npe_A Nidogen, entactin; glyc 77.8 10 0.00035 31.0 8.4 66 33-100 124-196 (267)
253 2xe4_A Oligopeptidase B; hydro 77.4 1.3 4.6E-05 43.3 3.2 56 32-91 175-239 (751)
254 1xks_A Nuclear pore complex pr 77.4 15 0.00053 34.8 10.5 58 43-101 111-171 (450)
255 2xbg_A YCF48-like protein; pho 76.3 13 0.00046 32.0 9.1 66 30-95 204-272 (327)
256 4hw6_A Hypothetical protein, I 75.1 8.3 0.00028 35.4 7.8 55 34-91 142-199 (433)
257 1kb0_A Quinohemoprotein alcoho 72.7 1.8 6.3E-05 42.1 2.8 49 51-101 457-506 (677)
258 3ott_A Two-component system se 72.6 15 0.00051 35.3 9.1 69 29-100 20-89 (758)
259 1flg_A Protein (quinoprotein e 69.3 3.5 0.00012 39.5 3.9 53 36-91 492-547 (582)
260 1kb0_A Quinohemoprotein alcoho 68.9 5.3 0.00018 38.8 5.1 52 36-90 483-537 (677)
261 2hz6_A Endoplasmic reticulum t 68.9 1.5 5.2E-05 38.8 1.2 60 41-100 130-190 (369)
262 2g8s_A Glucose/sorbosone dehyd 68.9 10 0.00035 33.5 6.6 48 34-83 21-76 (353)
263 3zwu_A Alkaline phosphatase PH 67.8 11 0.00037 37.0 7.1 54 36-90 481-548 (592)
264 2ad6_A Methanol dehydrogenase 67.5 2.8 9.7E-05 39.9 2.9 54 35-91 469-525 (571)
265 2ece_A 462AA long hypothetical 66.5 6.8 0.00023 37.6 5.2 65 35-101 142-236 (462)
266 1olz_A Semaphorin 4D; developm 66.2 19 0.00066 35.6 8.6 70 30-99 396-478 (663)
267 4a9v_A PHOX; hydrolase, beta-p 64.7 13 0.00044 36.8 6.9 91 32-134 474-581 (592)
268 3nol_A Glutamine cyclotransfer 63.4 15 0.0005 32.5 6.5 84 14-100 24-114 (262)
269 1w6s_A Methanol dehydrogenase 62.9 8.4 0.00029 37.3 5.2 53 35-90 478-533 (599)
270 3nok_A Glutaminyl cyclase; bet 62.6 14 0.00048 32.8 6.2 65 32-100 55-123 (268)
271 2xbg_A YCF48-like protein; pho 62.0 50 0.0017 28.3 9.6 64 32-98 164-230 (327)
272 3sre_A PON1, serum paraoxonase 62.0 18 0.00061 32.9 7.0 67 30-100 164-250 (355)
273 3pbp_A Nucleoporin NUP82; beta 60.2 1.1E+02 0.0037 29.4 12.2 125 40-176 30-158 (452)
274 3al9_A Plexin-A2; beta-propell 59.1 20 0.00069 34.6 7.1 71 30-100 399-478 (539)
275 3sbq_A Nitrous-oxide reductase 58.6 59 0.002 32.5 10.4 131 34-175 326-488 (638)
276 3ol2_B Plexin-B1; beta-propell 58.0 19 0.00066 34.9 6.7 71 29-100 385-463 (528)
277 2iwa_A Glutamine cyclotransfer 57.5 24 0.00082 30.8 6.8 62 41-102 161-237 (266)
278 1kv9_A Type II quinohemoprotei 56.9 12 0.00039 36.3 5.0 55 35-92 463-520 (668)
279 3qqz_A Putative uncharacterize 54.8 1E+02 0.0035 26.5 14.8 68 31-100 27-98 (255)
280 1q47_A Semaphorin 3A; beta pro 54.3 42 0.0014 32.0 8.4 68 32-99 405-488 (495)
281 3kya_A Putative phosphatase; s 53.7 26 0.00089 33.5 6.8 58 34-93 142-213 (496)
282 2p9w_A MAL S 1 allergenic prot 53.4 23 0.00078 32.4 6.1 67 33-100 139-213 (334)
283 1tl2_A L10, protein (tachylect 52.0 16 0.00054 32.2 4.6 60 33-94 90-155 (236)
284 3kya_A Putative phosphatase; s 50.3 44 0.0015 31.9 7.8 66 34-100 250-339 (496)
285 1cru_A Protein (soluble quinop 49.6 32 0.0011 31.8 6.6 57 33-90 29-98 (454)
286 3qqz_A Putative uncharacterize 49.0 67 0.0023 27.7 8.2 63 31-93 173-244 (255)
287 1yiq_A Quinohemoprotein alcoho 48.0 12 0.00041 36.4 3.5 50 50-101 454-504 (689)
288 3ott_A Two-component system se 45.9 79 0.0027 30.2 8.9 70 30-100 372-446 (758)
289 3das_A Putative oxidoreductase 45.7 51 0.0017 29.8 7.2 50 34-83 35-90 (347)
290 4gz8_A Semaphorin-3A; multi-do 42.6 72 0.0025 31.7 8.2 71 30-100 411-497 (667)
291 3nok_A Glutaminyl cyclase; bet 41.6 24 0.00083 31.3 4.2 55 43-101 107-163 (268)
292 3nvq_A Semaphorin-7A; beta-pro 41.0 86 0.0029 30.8 8.4 72 29-100 360-446 (590)
293 1tl2_A L10, protein (tachylect 39.8 31 0.0011 30.4 4.5 64 32-99 42-113 (236)
294 4fhn_B Nucleoporin NUP120; pro 39.1 92 0.0031 32.2 8.6 92 20-118 160-278 (1139)
295 2p9w_A MAL S 1 allergenic prot 37.9 1.2E+02 0.004 27.7 8.3 56 34-89 16-82 (334)
296 3nol_A Glutamine cyclotransfer 37.4 1.1E+02 0.0037 26.9 7.7 62 41-102 181-254 (262)
297 1kv9_A Type II quinohemoprotei 36.2 84 0.0029 30.2 7.4 70 31-100 230-331 (668)
298 1ijq_A LDL receptor, low-densi 35.6 1.5E+02 0.0053 25.0 8.3 66 33-100 122-193 (316)
299 2wg3_C Hedgehog-interacting pr 34.2 98 0.0034 28.9 7.3 56 34-89 17-89 (463)
300 3mbr_X Glutamine cyclotransfer 34.0 1E+02 0.0034 26.7 6.9 63 35-100 25-92 (243)
301 3pbp_A Nucleoporin NUP82; beta 33.6 74 0.0025 30.5 6.4 60 30-89 124-196 (452)
302 1ijq_A LDL receptor, low-densi 33.4 1.1E+02 0.0036 26.1 6.9 64 34-99 80-149 (316)
303 4gq2_M Nucleoporin NUP120; bet 32.0 2.1E+02 0.0071 29.1 9.8 89 23-118 164-276 (950)
304 3oky_A Plexin-A2; transmembran 31.0 47 0.0016 33.2 4.7 71 30-100 398-477 (681)
305 4fww_A Macrophage-stimulating 30.3 1E+02 0.0035 29.0 6.8 71 28-99 402-480 (527)
306 3p5b_L Low density lipoprotein 28.1 2.2E+02 0.0074 25.3 8.3 65 34-99 205-274 (400)
307 3b7f_A Glycosyl hydrolase, BNR 27.5 2.1E+02 0.0072 24.7 7.9 32 20-51 44-77 (394)
308 2ism_A Putative oxidoreductase 27.1 69 0.0024 28.0 4.7 59 32-90 76-152 (352)
309 2ad6_A Methanol dehydrogenase 27.0 53 0.0018 31.1 4.2 50 49-100 442-492 (571)
310 1k3i_A Galactose oxidase precu 25.9 2.7E+02 0.0091 26.2 8.9 64 35-100 247-321 (656)
311 3v64_C Agrin; beta propeller, 25.5 1.8E+02 0.006 25.2 7.1 64 34-99 119-188 (349)
312 3v65_B Low-density lipoprotein 24.8 2.4E+02 0.0083 24.7 7.9 64 33-99 79-144 (386)
313 3v64_C Agrin; beta propeller, 24.3 3.4E+02 0.012 23.3 8.7 91 33-133 75-170 (349)
314 1n7d_A LDL receptor, low-densi 24.0 69 0.0024 31.2 4.5 64 34-99 456-525 (699)
315 2be1_A Serine/threonine-protei 23.9 1.2E+02 0.004 27.4 5.7 62 41-102 10-85 (339)
316 3oky_B Putative uncharacterize 23.9 1.1E+02 0.0037 30.0 5.8 68 32-99 404-496 (565)
317 1flg_A Protein (quinoprotein e 23.3 55 0.0019 31.1 3.6 50 49-100 464-514 (582)
318 3sre_A PON1, serum paraoxonase 22.7 2.4E+02 0.0083 25.3 7.6 65 35-101 54-147 (355)
319 3ei3_A DNA damage-binding prot 21.2 3.3E+02 0.011 28.5 9.2 66 30-100 513-589 (1158)
320 1n7d_A LDL receptor, low-densi 21.1 1.3E+02 0.0043 29.3 5.7 65 34-100 499-569 (699)
No 1
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.42 E-value=3.4e-12 Score=111.84 Aligned_cols=132 Identities=14% Similarity=0.193 Sum_probs=93.7
Q ss_pred CCccccceeeecccCCCceecccccccCCCCceeEEEecCCCc-EEEeCCCCcEEEEecccccc--ceecCCCCCCCeeE
Q 044877 1 MRDKNGIVQNLANAGAPVLNWSQGHQFSRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ--AKTAFPGLGSPIRY 77 (244)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~k~Y~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~--aKt~lpglGdPI~~ 77 (244)
|||..-+++++. +| ......+++++|+|. ||+||.||.||+||..+.+. ...++.++..+|.+
T Consensus 1 ~~~~~~~~~~~~-----------~h---~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~ 66 (345)
T 3fm0_A 1 MKDSLVLLGRVP-----------AH---PDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRK 66 (345)
T ss_dssp ---CEEEEEEEC-----------CS---TTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEE
T ss_pred CCccEEEeeeec-----------CC---CCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEE
Confidence 666666666663 11 122578999999998 99999999999999865432 22345789999999
Q ss_pred EEeCCCCCEEEEeC-CcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCC
Q 044877 78 VDVTYDGRWILGTT-DTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGK 156 (244)
Q Consensus 78 vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~ 156 (244)
|+++|||++|++.+ +.+++|||.... ....+. .+.|+....+...|+ + .
T Consensus 67 ~~~sp~g~~l~s~s~D~~v~iw~~~~~-------------------~~~~~~------~~~~h~~~v~~v~~s--p---~ 116 (345)
T 3fm0_A 67 VAWSPCGNYLASASFDATTCIWKKNQD-------------------DFECVT------TLEGHENEVKSVAWA--P---S 116 (345)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEECCC--------------------EEEEE------EECCCSSCEEEEEEC--T---T
T ss_pred EEECCCCCEEEEEECCCcEEEEEccCC-------------------CeEEEE------EccCCCCCceEEEEe--C---C
Confidence 99999999999777 578999996320 111222 344555555666776 3 2
Q ss_pred cceEEEEeeCCeEEEEechh
Q 044877 157 QERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 157 ~E~~IvtStG~fvvvWn~~k 176 (244)
+..++++|.+..+.+||+..
T Consensus 117 ~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 117 GNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SSEEEEEETTSCEEEEEECT
T ss_pred CCEEEEEECCCeEEEEECCC
Confidence 57889999999999999864
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.40 E-value=2.6e-12 Score=110.38 Aligned_cols=113 Identities=9% Similarity=0.167 Sum_probs=88.9
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNGT 108 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~~ 108 (244)
..+++++++|+|. ||+|+.||.|||||..+++..+ .+.++..||..+.++|||++|++.+. ..|++||..-
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~------ 86 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVR-SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT------ 86 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT------
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeE-EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCC------
Confidence 4589999999998 9999999999999998776555 46789999999999999999998874 7799999631
Q ss_pred cccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.+. .+.+|.-..+...|+ + .+..++++|.+..|.+||++.
T Consensus 87 ---------------~~~~~------~~~~h~~~v~~~~~~--~---~~~~l~sgs~D~~v~lWd~~~ 128 (304)
T 2ynn_A 87 ---------------GEKVV------DFEAHPDYIRSIAVH--P---TKPYVLSGSDDLTVKLWNWEN 128 (304)
T ss_dssp ---------------CCEEE------EEECCSSCEEEEEEC--S---SSSEEEEEETTSCEEEEEGGG
T ss_pred ---------------CcEEE------EEeCCCCcEEEEEEc--C---CCCEEEEECCCCeEEEEECCC
Confidence 11222 234454444555676 2 257889999999999999875
No 3
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.39 E-value=8.8e-13 Score=117.49 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=65.1
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
...++|++++|+|. ||+||.||.|||||..+++..++.+.+|.++|++|+|||||++|++.+ +++|+|||.
T Consensus 269 ~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 269 FKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 34589999999998 999999999999999988878878899999999999999999999777 688999996
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.39 E-value=5.1e-12 Score=110.42 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=88.7
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
..+.++++++|+|. ||+||.||.||+||..+.+... .+.++..+|.+|+++|||++|++++ +.+|+|||..
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~------ 278 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG-TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVG------ 278 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT------
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE-EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCC------
Confidence 34688999999997 9999999999999998776555 5788999999999999999999777 5789999963
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEec
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNF 174 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~ 174 (244)
..++++ .+.++.-......|+ + .+..+++++.+..+.+||.
T Consensus 279 ---------------~~~~~~------~~~~h~~~v~~v~~s--~---~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 279 ---------------TRTCVH------TFFDHQDQVWGVKYN--G---NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp ---------------TTEEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTCCEEEEEC
T ss_pred ---------------CCEEEE------EEcCCCCcEEEEEEC--C---CCCEEEEEeCCCeEEEEeC
Confidence 123333 344554445556776 2 2578999999999999996
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.39 E-value=3.7e-12 Score=113.52 Aligned_cols=116 Identities=14% Similarity=0.118 Sum_probs=88.0
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccc---eecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccC
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQA---KTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDK 105 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~a---Kt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~ 105 (244)
....+++++++++.|++||.||.|||||..+++.. +..+.+|.++|.+|+++|||++|++.+ +.+|+|||..
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~---- 157 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA---- 157 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT----
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC----
Confidence 34589999999999999999999999999765533 223457899999999999999999777 5789999963
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
..+.++ .+.||.-.-+...|+. +....++++|.+..|.+||++.
T Consensus 158 -----------------~~~~~~------~~~~h~~~V~~~~~~~----~~~~~l~s~s~D~~v~iwd~~~ 201 (344)
T 4gqb_B 158 -----------------QQVVLS------SYRAHAAQVTCVAASP----HKDSVFLSCSEDNRILLWDTRC 201 (344)
T ss_dssp -----------------TTEEEE------EECCCSSCEEEEEECS----SCTTEEEEEETTSCEEEEETTS
T ss_pred -----------------CCcEEE------EEcCcCCceEEEEecC----CCCCceeeeccccccccccccc
Confidence 123344 4556655556667762 1134567888899999999864
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.38 E-value=6.5e-12 Score=109.74 Aligned_cols=114 Identities=18% Similarity=0.362 Sum_probs=88.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~ 107 (244)
....++++++|+|. ||+|+.||.||+||..+++... .+.++..||.+|+++|||++|++.+. .+|+|||..-
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~----- 237 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLH-TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH----- 237 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-----
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-----
Confidence 34578999999998 9999999999999998876555 47889999999999999999998875 7799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...+. .+.|+.-..+...|+ + .++.++++|.+..+.+||++.
T Consensus 238 ----------------~~~~~------~~~~h~~~v~~~~~s--p---~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 238 ----------------ANLAG------TLSGHASWVLNVAFC--P---DDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp ----------------CCEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTT
T ss_pred ----------------cceeE------EEcCCCCceEEEEEC--C---CCCEEEEEeCCCcEEEEeCCC
Confidence 11122 233444444455666 2 257899999999999999863
No 7
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.38 E-value=6.7e-12 Score=109.05 Aligned_cols=121 Identities=15% Similarity=0.201 Sum_probs=85.1
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCC-CCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPG-LGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpg-lGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~ 107 (244)
...++|++++|+|. ||+|+.||.||+||..+++.....+++ +..+|++|+++|||++|++++++.|+|||..-.
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~---- 245 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKD---- 245 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSS----
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCC----
Confidence 34589999999998 899999999999999887655234676 999999999999999999998889999997420
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEee-CCeEEEEechhh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATV-GKFSVIWNFQQV 177 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtSt-G~fvvvWn~~kV 177 (244)
...+.++....|....+. +...|+ + .++.+++++. +.-+.+|++++-
T Consensus 246 --------------~~~~~~~~~~~~~~~~~~----~~~~~~--~---~g~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 246 --------------VGTLAYPTYTIPEFKTGT----VTYDID--D---SGKNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp --------------TTCBSSCCCBC-----CC----EEEEEC--T---TSSEEEEEETTTTEEEEEEECTT
T ss_pred --------------Ccceeecccccccccccc----eEEEEC--C---CCCEEEEecCCCCcEEEEEEccc
Confidence 011122211111111111 223454 2 2577777777 999999999653
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.38 E-value=5.1e-12 Score=113.73 Aligned_cols=114 Identities=12% Similarity=0.159 Sum_probs=91.0
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
..+.+|++++|+|. +|+||.||.||+||..+++..+ .+.++.++|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~-~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~----- 181 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER-TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQG----- 181 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCE-EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTS-----
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE-EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----
Confidence 45689999999987 9999999999999998876555 5789999999999999999998776 57899999621
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...++ .+.|+....+...|+ + .+..++++|.+..+.+||++.
T Consensus 182 ----------------~~~~~------~~~~h~~~V~~v~~~--p---~~~~l~s~s~D~~i~~wd~~~ 223 (410)
T 1vyh_C 182 ----------------FECIR------TMHGHDHNVSSVSIM--P---NGDHIVSASRDKTIKMWEVQT 223 (410)
T ss_dssp ----------------SCEEE------CCCCCSSCEEEEEEC--S---SSSEEEEEETTSEEEEEETTT
T ss_pred ----------------CceeE------EEcCCCCCEEEEEEe--C---CCCEEEEEeCCCeEEEEECCC
Confidence 12333 344565555666776 2 257899999999999999864
No 9
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.37 E-value=6e-12 Score=114.86 Aligned_cols=112 Identities=23% Similarity=0.316 Sum_probs=83.9
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
....+|+|++|+|. ||+||.||.||+||. +++..+ .|.+|..+|++|++||||++|++.+ +.+|+|||.. +
T Consensus 16 ~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~-~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-----~ 88 (577)
T 2ymu_A 16 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ-TLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-----G 88 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-----S
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEE-EEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-----C
Confidence 45689999999998 999999999999996 455566 4789999999999999999998776 4779999941 1
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++++ .+.|+.-.-+...|+ + .+..+++++.+..+.+|+...
T Consensus 89 -----------------~~~~------~~~~~~~~v~~~~~s--~---d~~~l~~~~~d~~~~~~~~~~ 129 (577)
T 2ymu_A 89 -----------------QLLQ------TLTGHSSSVRGVAFS--P---DGQTIASASDDKTVKLWNRNG 129 (577)
T ss_dssp -----------------CEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTC
T ss_pred -----------------CEEE------EEECCCCCEEEEEEC--C---CCCEEEEEcCCCceeeccccc
Confidence 1222 233333333445665 2 257788888888999998643
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.36 E-value=6.1e-12 Score=108.08 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=90.4
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
...+..+++++++|. ||+||.||.||+||..+++... .+.++.++|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 54 ~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~---- 128 (304)
T 2ynn_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV-DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN---- 128 (304)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG----
T ss_pred cCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE-EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC----
Confidence 345689999999987 9999999999999998876555 4788999999999999999999777 57899999631
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.....+ .+.|+....+...|+ + .....++++|.+..+.+||+..
T Consensus 129 ----------------~~~~~~------~~~~h~~~v~~v~~~--p--~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 129 ----------------NWALEQ------TFEGHEHFVMCVAFN--P--KDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp ----------------TTEEEE------EECCCCSCEEEEEEC--T--TCTTEEEEEETTSEEEEEETTC
T ss_pred ----------------Ccchhh------hhcccCCcEEEEEEC--C--CCCCEEEEEeCCCeEEEEECCC
Confidence 001122 234555545566776 3 1257889999999999999854
No 11
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.33 E-value=2.5e-11 Score=100.42 Aligned_cols=127 Identities=12% Similarity=0.043 Sum_probs=88.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccc---cceecCCCCCCCeeEEEeCC--CCCEEEEeC-CcceEEEEeee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMR---QAKTAFPGLGSPIRYVDVTY--DGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r---~aKt~lpglGdPI~~vdvS~--DG~~lLaT~-~~~L~L~dt~~ 102 (244)
...++|++++++|. ||+|+.||.||+||..+.. .....+.++..+|++|+++| ||++|++.+ +.+|++||...
T Consensus 11 ~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 11 DDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDP 90 (351)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECT
T ss_pred ccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCC
Confidence 34689999999997 9999999999999987542 12234578999999999999 799998777 57899999753
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
..... .....+.+. .+.++.-..+...|+ +. ..+..+++++.+..+.+||++.-
T Consensus 91 ~~~~~------------~~~~~~~~~------~~~~~~~~v~~~~~~--~~-~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 91 DQEEC------------SGRRWNKLC------TLNDSKGSLYSVKFA--PA-HLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp TSCTT------------SSCSEEEEE------EECCCSSCEEEEEEC--CG-GGCSEEEEEETTCEEEEEECSST
T ss_pred Ccccc------------cccCcceee------eecccCCceeEEEEc--CC-CCCcEEEEecCCCcEEEecCCCh
Confidence 11000 001112232 233444445556676 21 11467888899999999998753
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.33 E-value=2.4e-11 Score=103.17 Aligned_cols=114 Identities=17% Similarity=0.231 Sum_probs=87.1
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
....++++++|+|. ||+|+.||.||+||...++..+ .+.++..+|.+++++|||++|++.+ +..|++||..-
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~----- 96 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSS----- 96 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch-hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCC-----
Confidence 35689999999998 9999999999999998776555 5688999999999999999999777 47799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++........|+ + .+..+++++.+..+.+||++.
T Consensus 97 ----------------~~~~~------~~~~~~~~v~~~~~~--~---~~~~l~s~~~d~~i~iwd~~~ 138 (312)
T 4ery_A 97 ----------------GKCLK------TLKGHSNYVFCCNFN--P---QSNLIVSGSFDESVRIWDVKT 138 (312)
T ss_dssp ----------------CCEEE------EEECCSSCEEEEEEC--S---SSSEEEEEETTSCEEEEETTT
T ss_pred ----------------CcEEE------EEcCCCCCEEEEEEc--C---CCCEEEEEeCCCcEEEEECCC
Confidence 11222 223333333444565 2 257888999999999999864
No 13
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.32 E-value=1e-11 Score=113.28 Aligned_cols=110 Identities=25% Similarity=0.360 Sum_probs=86.1
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
-...+++++++|+|. ||+|+.||.||+||. +++..+ .++++.++|++|++||||++|++.+ +..|+|||..
T Consensus 466 ~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~-~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~----- 538 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQ-TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN----- 538 (577)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEE-EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-----
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEE-EEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-----
Confidence 345689999999998 999999999999996 445555 4788999999999999999998777 4779999931
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEe
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWN 173 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn 173 (244)
+ ++++ .+.||.-.-+...|+ + + ++.++++|.+..+.+||
T Consensus 539 ~-----------------~~~~------~~~~h~~~v~~~~fs--~-d--g~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 G-----------------QLLQ------TLTGHSSSVWGVAFS--P-D--GQTIASASSDKTVKLWN 577 (577)
T ss_dssp S-----------------CEEE------EEECCSSCEEEEEEC--T-T--SSCEEEEETTSCEEEEC
T ss_pred C-----------------CEEE------EEcCCCCCEEEEEEc--C-C--CCEEEEEeCCCEEEEeC
Confidence 1 1233 345655555666776 2 2 57888999999999997
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.30 E-value=3.3e-11 Score=107.34 Aligned_cols=117 Identities=10% Similarity=0.084 Sum_probs=82.8
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-C-CcceEEEEeeeccCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-T-DTYLILICTLFTDKN 106 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~-~~~L~L~dt~~~~~~ 106 (244)
...++|++++++|. ||+||.||.||+||..+++..+ .+.+|.++|.++++++||..+|++ + +.+|+|||..-. +
T Consensus 127 ~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~-~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~ 203 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS-SYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--K 203 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--S
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-EEcCcCCceEEEEecCCCCCceeeecccccccccccccc--c
Confidence 45689999999998 9999999999999998876555 578999999999999999766544 3 588999997420 0
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+. +.+. ..++....+...|+ + .....+++++.+..|.+||++.
T Consensus 204 ---------------~~-~~~~-------~~~~~~~~~~~~~~--p--~~~~~l~sg~~dg~v~~wd~~~ 246 (344)
T 4gqb_B 204 ---------------PA-SQIG-------CSAPGYLPTSLAWH--P--QQSEVFVFGDENGTVSLVDTKS 246 (344)
T ss_dssp ---------------CE-EECC-----------CCCEEEEEEC--S--SCTTEEEEEETTSEEEEEESCC
T ss_pred ---------------ee-eeee-------cceeeccceeeeec--C--CCCcceEEeccCCcEEEEECCC
Confidence 11 1111 11112222334554 2 2245667788899999999864
No 15
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.29 E-value=3e-11 Score=101.91 Aligned_cols=116 Identities=12% Similarity=0.171 Sum_probs=84.1
Q ss_pred CCceeEEEecCC---Cc-EEEeCCCCcEEEEeccc-cccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeec
Q 044877 30 GTNFQCFASTGD---GS-IVVGSLDGKIRLYSSNS-MRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFT 103 (244)
Q Consensus 30 ~~~Ft~vats~~---G~-IavGS~dG~IRLyD~~~-~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~ 103 (244)
...++|++++++ |. ||+|+.||.|++||..+ .+.....+.++..+|++|+++|||++|++.+ +..|++||..-
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~- 117 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSS- 117 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCC-
Confidence 456999999998 56 99999999999999975 4444346788999999999999999999777 57799999631
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...++ +.++....+...|... ..+..+++++.+..+.+||++.
T Consensus 118 --------------------~~~~~-------~~~~~~~v~~~~~~~~---~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 118 --------------------NQAIQ-------IAQHDAPVKTIHWIKA---PNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp --------------------TEEEE-------EEECSSCEEEEEEEEC---SSCEEEEEEETTSEEEEECSSC
T ss_pred --------------------CCcee-------eccccCceEEEEEEeC---CCCCEEEEccCCCcEEEEECCC
Confidence 11122 1123333444455311 2246678888888899998864
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.28 E-value=8.6e-11 Score=102.32 Aligned_cols=70 Identities=23% Similarity=0.240 Sum_probs=61.8
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
..+++++++++|. +|+||.||.||+||..+++..+ .+.++.++|.+|+++|||++|++.+ +..|+|||..
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~-~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYK-RFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEE-EEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE-EEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 4589999999987 8999999999999998876555 4688999999999999999999776 5889999974
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.28 E-value=3.8e-11 Score=108.02 Aligned_cols=113 Identities=12% Similarity=0.157 Sum_probs=87.6
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGT 108 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~ 108 (244)
...++++++++|. +|+||.||.||+||..+.++.+ .+.++..+|.+|+++|||++|++.+ +.+|++||..-
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~-~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~------ 223 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR-TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT------ 223 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE-CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT------
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE-EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC------
Confidence 4589999999997 9999999999999998776555 5789999999999999999999776 58899999631
Q ss_pred cccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...++ .+.|+........|+ . .+..+++++.+..+.+||+..
T Consensus 224 ---------------~~~~~------~~~~h~~~v~~~~~~--~---~g~~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 224 ---------------GYCVK------TFTGHREWVRMVRPN--Q---DGTLIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp ---------------CCEEE------EEECCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTT
T ss_pred ---------------CcEEE------EEeCCCccEEEEEEC--C---CCCEEEEEcCCCeEEEEECCC
Confidence 11222 233444333444565 2 257888899999999999864
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.28 E-value=5.1e-11 Score=103.22 Aligned_cols=118 Identities=21% Similarity=0.265 Sum_probs=85.1
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
....++++++++|. ||+||.||.||+||..+++..+ .+.++..+|.+|+++|||++|++.+ +.+|+|||.. +
T Consensus 65 ~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-----~ 138 (319)
T 3frx_A 65 SHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ-RFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-----G 138 (319)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-----S
T ss_pred cccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE-EEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-----C
Confidence 34589999999997 9999999999999998876555 4688999999999999999999887 5789999962 1
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeec-CCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVT-ENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~t-g~~~~E~~IvtStG~fvvvWn~~k 176 (244)
..+. .+.|+........|.... .......+++++.+..+.+||++.
T Consensus 139 -----------------~~~~------~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~ 185 (319)
T 3frx_A 139 -----------------QCLA------TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ 185 (319)
T ss_dssp -----------------CEEE------EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT
T ss_pred -----------------CeEE------EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc
Confidence 1111 122333222333443110 001245788999999999999975
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.28 E-value=5.3e-11 Score=103.61 Aligned_cols=118 Identities=13% Similarity=0.173 Sum_probs=81.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccc------cceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMR------QAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r------~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
...+++++++|+|. ||+||.||.|||||..... .....+.++.++|.+|+++|||++|++.+ +.+|+|||..
T Consensus 58 ~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 58 KKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred cCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 44689999999998 9999999999999984211 12224688999999999999999998777 5889999973
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
.. + ...+.++ .+.++....+...|+ + .+..++++|.+..+.+||..
T Consensus 138 ~~---~--------------~~~~~~~------~~~~h~~~v~~v~~~--p---~~~~l~s~s~D~~i~iW~~~ 183 (330)
T 2hes_X 138 ES---G--------------EEYECIS------VLQEHSQDVKHVIWH--P---SEALLASSSYDDTVRIWKDY 183 (330)
T ss_dssp TT---C--------------CCCEEEE------EECCCSSCEEEEEEC--S---SSSEEEEEETTSCEEEEEEE
T ss_pred CC---C--------------CCeEEEE------EeccCCCceEEEEEC--C---CCCEEEEEcCCCeEEEEECC
Confidence 10 0 0112233 233454445556776 2 25788889999999999874
No 20
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.28 E-value=5e-11 Score=107.34 Aligned_cols=115 Identities=15% Similarity=0.078 Sum_probs=80.7
Q ss_pred CceeEEEecC-CCc-EEEeCCCCcEEEEeccccccc-eecCCCCCCCeeEEEeCC-CCCEEEEeC-CcceEEEEeeeccC
Q 044877 31 TNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQA-KTAFPGLGSPIRYVDVTY-DGRWILGTT-DTYLILICTLFTDK 105 (244)
Q Consensus 31 ~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~a-Kt~lpglGdPI~~vdvS~-DG~~lLaT~-~~~L~L~dt~~~~~ 105 (244)
..++|++++| ++. ||+||.||.|+|||..+.... ...+.+|.++|++|+++| ||++|++++ +.+|+|||..-
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~--- 196 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG--- 196 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS---
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC---
Confidence 3489999999 555 999999999999998655432 223568999999999997 799998877 58899999621
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
+ ..+.+. . .......+....|+ . .+..+++++.+..|.+||++
T Consensus 197 -~---------------~~~~~~--~----~~~~~~~~~~~~~~--~---~~~~l~~g~~dg~i~~wd~~ 239 (435)
T 4e54_B 197 -N---------------ILRVFA--S----SDTINIWFCSLDVS--A---SSRMVVTGDNVGNVILLNMD 239 (435)
T ss_dssp -C---------------EEEEEE--C----CSSCSCCCCCEEEE--T---TTTEEEEECSSSBEEEEESS
T ss_pred -C---------------ceeEEe--c----cCCCCccEEEEEEC--C---CCCEEEEEeCCCcEeeeccC
Confidence 0 111111 0 11122233344555 2 25788889999999999985
No 21
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.27 E-value=8.4e-11 Score=102.13 Aligned_cols=116 Identities=10% Similarity=0.022 Sum_probs=83.1
Q ss_pred CceeEEEecC--CCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 31 TNFQCFASTG--DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 31 ~~Ft~vats~--~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
.++.+++++| +|. +|+||.||.||+||..+++..++....++.+|.+++++|||++|++.+ +..|+|||..-.
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~--- 202 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP--- 202 (343)
T ss_dssp SCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT---
T ss_pred CCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC---
Confidence 5699999999 887 899999999999999877765544456777999999999999998766 588999997420
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
++.+..++. +|.-..+...|+ + .+..+++++ +..+.+||+++-
T Consensus 203 --------------~~~~~~~~~--------~h~~~v~~l~fs--~---~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 203 --------------DQASSRFPV--------DEEAKIKEVKFA--D---NGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp --------------TSCCEECCC--------CTTSCEEEEEEC--T---TSSEEEEEE-SSBEEEEETTSS
T ss_pred --------------CCCccEEec--------cCCCCEEEEEEe--C---CCCEEEEEe-CCeEEEEEcCCC
Confidence 011122221 133334455776 2 245666666 559999999764
No 22
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.27 E-value=7.4e-11 Score=100.11 Aligned_cols=116 Identities=27% Similarity=0.347 Sum_probs=85.0
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
..+.++++++++|. +++|+.||.|++||..+.+..++.......+|..++++|||++|++++ +..|+|||..-
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~----- 223 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSK----- 223 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTT-----
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC-----
Confidence 45689999999997 999999999999999887766766677888999999999999999877 57799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCc--cceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVN--NKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~--~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++. .....+.|. . ..++.+++++.+..+.+||++.
T Consensus 224 ----------------~~~~~------~~~~~~~~~~~~~~~~~--~--~~~~~l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 224 ----------------GKCLK------TYTGHKNEKYCIFANFS--V--TGGKWIVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp ----------------TEEEE------EECSSCCSSSCCCEEEE--C--SSSCEEEECCTTSCEEEEETTT
T ss_pred ----------------CcEEE------EEEecCCceEEEEEEEE--e--CCCcEEEEECCCCEEEEEECCC
Confidence 11222 122221 111122343 1 1256788888999999999863
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.26 E-value=7.6e-11 Score=102.78 Aligned_cols=115 Identities=15% Similarity=0.128 Sum_probs=86.2
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
....++++++|+|. +++|+.||.||+||..+.+..+ .+.++..+|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 184 ~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~----- 257 (340)
T 1got_B 184 TGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQ-TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA----- 257 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEE-EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC-----
Confidence 34689999999997 9999999999999998776555 4688999999999999999999777 57899999631
Q ss_pred CcccccccccCCCCCcceeee-eCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLK-LTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~-L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...+. +.. .+.....+...|+ + .+..+++++.+..+.+||+.+
T Consensus 258 ----------------~~~~~~~~~-----~~~~~~v~~~~~s--~---~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 258 ----------------DQELMTYSH-----DNIICGITSVSFS--K---SGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ----------------TEEEEEECC-----TTCCSCEEEEEEC--T---TSSEEEEEETTSEEEEEETTT
T ss_pred ----------------CcEEEEEcc-----CCcccceEEEEEC--C---CCCEEEEECCCCeEEEEEccc
Confidence 01111 110 0111234455676 2 267899999999999999754
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.26 E-value=6.1e-11 Score=103.41 Aligned_cols=113 Identities=14% Similarity=0.169 Sum_probs=87.9
Q ss_pred CceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCCc
Q 044877 31 TNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGTT 109 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~ 109 (244)
...+|+++++++.|++||.||.||+||..+++... .+.++..+|.+++++|||+++++.+ +.+|+|||..-
T Consensus 144 ~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~------- 215 (340)
T 1got_B 144 GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTT-TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE------- 215 (340)
T ss_dssp SCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-------
T ss_pred ccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEE-EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-------
Confidence 45789999999999999999999999998776555 5788999999999999999998776 68899999631
Q ss_pred ccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 110 KTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 110 ~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...++ .+.++....+...|+ + .+..++++|.+..+.+||++.
T Consensus 216 --------------~~~~~------~~~~h~~~v~~v~~~--p---~~~~l~s~s~d~~v~iwd~~~ 257 (340)
T 1got_B 216 --------------GMCRQ------TFTGHESDINAICFF--P---NGNAFATGSDDATCRLFDLRA 257 (340)
T ss_dssp --------------CSEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTT
T ss_pred --------------CeeEE------EEcCCcCCEEEEEEc--C---CCCEEEEEcCCCcEEEEECCC
Confidence 11122 233444444555676 2 257899999999999999875
No 25
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.26 E-value=5.6e-11 Score=100.04 Aligned_cols=120 Identities=13% Similarity=0.140 Sum_probs=85.9
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNGT 108 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~~ 108 (244)
...++|++++|+|. ||+|+.||.||+||..+.+..+. ++ .+++|..+.++|++.++.++.+..|+|||..- +
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~----~- 287 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT-LD-GGDIINALCFSPNRYWLCAATGPSIKIWDLEG----K- 287 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE-EE-CSSCEEEEEECSSSSEEEEEETTEEEEEETTT----T-
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee-ec-CCceEEeeecCCCCceeeccCCCEEEEEECCC----C-
Confidence 34689999999997 99999999999999987765553 34 57899999999999998888889999999631 0
Q ss_pred cccccccccCCCCCcceeeeeCccc--hhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLD--SHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~--~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...-.++++- ....++....+...|+ + .++.+++++.+..|.+||++.
T Consensus 288 ---------------~~~~~~~~~~~~~~~~~h~~~v~~l~~s--~---dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 288 ---------------IIVDELKQEVISTSSKAEPPQCTSLAWS--A---DGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ---------------EEEEEECCC-------CCCCCEEEEEEC--T---TSSEEEEEETTSCEEEEEEEC
T ss_pred ---------------eEEEeccccceeeeccCCCCCEEEEEEC--C---CCCEEEEEeCCCEEEEEeCCC
Confidence 0011111111 1223444445556676 2 257889999999999999863
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.26 E-value=7.6e-11 Score=103.23 Aligned_cols=118 Identities=12% Similarity=0.109 Sum_probs=86.3
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccc-cceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMR-QAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r-~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
...+++++++|+|. ||+||.||.|++||..... .....+.++..+|.+|+++|||++|++.+ +.+|+|||..-.
T Consensus 61 ~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~--- 137 (345)
T 3fm0_A 61 QRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE--- 137 (345)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT---
T ss_pred CCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC---
Confidence 34689999999997 9999999999999986542 12335789999999999999999998776 578999997420
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.....+. .+.++....+...|+ + .++.++++|.+..+.+||++.
T Consensus 138 ---------------~~~~~~~------~~~~h~~~v~~~~~~--p---~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 138 ---------------DEYECVS------VLNSHTQDVKHVVWH--P---SQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp ---------------SCEEEEE------EECCCCSCEEEEEEC--S---SSSCEEEEETTSCEEEEEEET
T ss_pred ---------------CCeEEEE------EecCcCCCeEEEEEC--C---CCCEEEEEeCCCcEEEEEecC
Confidence 0112222 223333334445665 2 257889999999999999763
No 27
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.25 E-value=8e-11 Score=104.27 Aligned_cols=116 Identities=16% Similarity=0.130 Sum_probs=80.0
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccc---eecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccC
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQA---KTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDK 105 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~a---Kt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~ 105 (244)
...+++++++++|.+++|+.||.|||||..+++.. +..+.++.++|.+|+++|||++|++.+ +..|+|||..-
T Consensus 94 ~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~--- 170 (357)
T 4g56_B 94 EAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ--- 170 (357)
T ss_dssp SSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT---
T ss_pred CCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCC---
Confidence 34589999999999999999999999998765422 222347889999999999999999776 57899999631
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+..+. .+.++.-..+...|+ . +....+++++.+..+.+||++.
T Consensus 171 ------------------~~~~~------~~~~h~~~v~~v~~s--~--~~~~~~~s~~~dg~v~~wd~~~ 213 (357)
T 4g56_B 171 ------------------KAVLK------SYNAHSSEVNCVAAC--P--GKDTIFLSCGEDGRILLWDTRK 213 (357)
T ss_dssp ------------------TEEEE------EECCCSSCEEEEEEC--T--TCSSCEEEEETTSCEEECCTTS
T ss_pred ------------------CcEEE------EEcCCCCCEEEEEEc--c--CCCceeeeeccCCceEEEECCC
Confidence 12222 233444344455676 2 2245678888899999999875
No 28
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1e-10 Score=101.82 Aligned_cols=119 Identities=10% Similarity=0.110 Sum_probs=85.8
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccc-cc--cceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeecc
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNS-MR--QAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTD 104 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~-~r--~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~ 104 (244)
...+++++++|+|. ||+||.||.||+||... .+ .....+.++..+|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~-- 184 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYD-- 184 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEET--
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCC--
Confidence 34689999999997 99999999999999842 11 12224688999999999999999998777 58899999641
Q ss_pred CCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 105 KNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 105 ~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.....++ .+.||...-....|+. .+....++++|.+..|.+||+..
T Consensus 185 -----------------~~~~~~~------~~~~h~~~v~~~~~~~---~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 185 -----------------DDWECVA------VLNGHEGTVWSSDFDK---TEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp -----------------TEEEEEE------EECCCSSCEEEEEECC---SSSSCEEEEEETTSCEEEEEEEE
T ss_pred -----------------CCeeEEE------EccCCCCcEEEEEecC---CCCeeEEEEEeCCCeEEEEEecC
Confidence 0112333 3445544444556762 12245788899999999999864
No 29
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.25 E-value=8.9e-11 Score=100.49 Aligned_cols=117 Identities=15% Similarity=0.138 Sum_probs=84.3
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEecccc--ccceecCCCCCCCeeEEEeCCC--CCEEEEeC-CcceEEEEeeecc
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSM--RQAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DTYLILICTLFTD 104 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~--r~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~~L~L~dt~~~~ 104 (244)
..+++++++++|. ||+||.||.|||||..+. +... .|.+|.++|.+|+++++ |++|++.+ +.+|+|||..-
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~-~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~-- 86 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN-- 86 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE-EECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS--
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE-EEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC--
Confidence 4588999999998 999999999999998532 3333 57899999999999974 89988766 58899999731
Q ss_pred CCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 105 KNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 105 ~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+ ....+. .+.++........|+ + ...+..++++|.+..+.+||++.
T Consensus 87 --~---------------~~~~~~------~~~~h~~~v~~v~~~--p-~~~g~~l~s~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 87 --G---------------RWSQIA------VHAVHSASVNSVQWA--P-HEYGPMLLVASSDGKVSVVEFKE 132 (297)
T ss_dssp --S---------------CBCCCE------EECCCSSCEEEEEEC--C-GGGCSEEEEEETTSEEEEEEBCS
T ss_pred --C---------------ceEEEE------EeecCCCceeEEEeC--c-CCCCcEEEEEECCCcEEEEEecC
Confidence 0 001111 123344444555666 2 11246889999999999999864
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.25 E-value=1e-10 Score=101.89 Aligned_cols=113 Identities=15% Similarity=0.227 Sum_probs=85.2
Q ss_pred CceeEEEe-----cC-CCc-EEEeCCCCcEEEEeccccc------cceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceE
Q 044877 31 TNFQCFAS-----TG-DGS-IVVGSLDGKIRLYSSNSMR------QAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLI 96 (244)
Q Consensus 31 ~~Ft~vat-----s~-~G~-IavGS~dG~IRLyD~~~~r------~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~ 96 (244)
...+|+++ ++ +|. ||+||.||.||+||....+ .....+.+|.++|.+|+++|||++|++.+ +.+|+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEE
Confidence 45899998 66 776 9999999999999985321 12235788999999999999999998777 58899
Q ss_pred EEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 97 LICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 97 L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
|||..- .+.++ .+.|+....+...|+ + .+..+++++.+..+.+||+.
T Consensus 102 lwd~~~---------------------~~~~~------~~~~h~~~v~~v~~s--p---~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 102 LWDLRT---------------------GTTYK------RFVGHQSEVYSVAFS--P---DNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp EEETTS---------------------SCEEE------EEECCCSCEEEEEEC--S---STTEEEEEETTSCEEEEESS
T ss_pred EEECCC---------------------CcEEE------EEcCCCCcEEEEEEC--C---CCCEEEEEcCCCEEEEEecc
Confidence 999631 11222 344555555566776 2 25788999999999999985
No 31
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.24 E-value=7.7e-11 Score=104.37 Aligned_cols=114 Identities=10% Similarity=0.084 Sum_probs=83.3
Q ss_pred CCceeEEEecCCC-c-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEE-eC-CcceEEEEeeeccC
Q 044877 30 GTNFQCFASTGDG-S-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILG-TT-DTYLILICTLFTDK 105 (244)
Q Consensus 30 ~~~Ft~vats~~G-~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLa-T~-~~~L~L~dt~~~~~ 105 (244)
....++++++|++ . +|+|+.||.||+||..+.+..+ .+.++..+|++|+++|||..+|| .+ +.+|+|||..-
T Consensus 226 ~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~-~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~--- 301 (357)
T 4g56_B 226 DTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ-TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF--- 301 (357)
T ss_dssp CSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE-EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS---
T ss_pred cccccchhhhhcccceEEEeecccceeEEECCCCcEeE-EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC---
Confidence 4458999999965 4 8999999999999998887666 46889999999999999865444 44 57899999631
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ ..+|.-.-+...|+ +.+ +..++++|.+..|.+|++.+
T Consensus 302 ------------------~~~~~-------~~~H~~~V~~vafs--P~d--~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 302 ------------------SEVFR-------DLSHRDFVTGVAWS--PLD--HSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ------------------CEEEE-------ECCCSSCEEEEEEC--SSS--TTEEEEEETTSCEEEEECC-
T ss_pred ------------------CcEeE-------ECCCCCCEEEEEEe--CCC--CCEEEEEcCCCeEEEEECCC
Confidence 12333 12343333444666 312 46788889999999999854
No 32
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.23 E-value=1.4e-10 Score=98.45 Aligned_cols=119 Identities=13% Similarity=0.115 Sum_probs=87.3
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEecc--ccccceecCCCCCCCeeEEEeCCC--CCEEEEeC-CcceEEEEeeec
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSN--SMRQAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DTYLILICTLFT 103 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~--~~r~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~~L~L~dt~~~ 103 (244)
...++|++++++|. ||+|+.||.|++||.. ..+..+ .+.++..+|++|+++++ |++|++.+ +..|+|||..-
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~- 88 (379)
T 3jrp_A 11 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN- 88 (379)
T ss_dssp CCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEE-EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET-
T ss_pred cccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeee-EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC-
Confidence 45689999999997 9999999999999986 443333 56889999999999988 99998777 57899999741
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
.....+. .+.++....+...|+ + .+.+..+++++.+..+.+||++.-
T Consensus 89 ------------------~~~~~~~------~~~~~~~~v~~~~~~--~-~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 89 ------------------GRWSQIA------VHAVHSASVNSVQWA--P-HEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp ------------------TEEEEEE------EECCCSSCEEEEEEC--C-GGGCSEEEEEETTSEEEEEECCTT
T ss_pred ------------------CceeEee------eecCCCcceEEEEeC--C-CCCCCEEEEecCCCcEEEEecCCC
Confidence 0111222 223334444555666 2 111578999999999999998754
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.23 E-value=1.3e-10 Score=100.75 Aligned_cols=121 Identities=13% Similarity=0.202 Sum_probs=86.0
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCC
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNG 107 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~ 107 (244)
-...+++++++|+|. ||+|+.||.||+||..+.+...+ ++ ..++|.+++++|||.+|++.+.+.+++|+...
T Consensus 195 h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~-~~-~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~----- 267 (319)
T 3frx_A 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT-LS-AQDEVFSLAFSPNRYWLAAATATGIKVFSLDP----- 267 (319)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE-EE-CCSCEEEEEECSSSSEEEEEETTEEEEEEETT-----
T ss_pred CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE-ec-CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCc-----
Confidence 345689999999997 99999999999999987765553 44 46799999999999999998888899998631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhc-CCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLA-GVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~-G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
....-.++|+...+. .+........|+ + .++.+++++.+..+.+||+..
T Consensus 268 ---------------~~~~~~~~~~~~~~~~~~~~~v~~~~~s--p---dg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 268 ---------------QYLVDDLRPEFAGYSKAAEPHAVSLAWS--A---DGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp ---------------EEEEEEECCCCTTCCGGGCCCEEEEEEC--T---TSSEEEEEETTSCEEEEEEEE
T ss_pred ---------------CeeeeccCccccccccCcCcceeEEEEC--C---CCCEEEEeecCceEEEEEEee
Confidence 001112223221111 111122334565 3 268899999999999999853
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.22 E-value=1.8e-10 Score=97.08 Aligned_cols=114 Identities=12% Similarity=0.082 Sum_probs=84.7
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
...++|++++++|. ||+|+.||.|++||..+++..+ .+.++..+|.+++++|||++|++.+ +..|++||..-
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~----- 105 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSN----- 105 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTT-----
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----
Confidence 45699999999997 9999999999999998776555 5788999999999999999999776 47799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeC-----CeEEEEechhh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVG-----KFSVIWNFQQV 177 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG-----~fvvvWn~~kV 177 (244)
.+.+.. +. +....+...|+ + .+..+++++.+ ..+.+||+..-
T Consensus 106 ----------------~~~~~~------~~-~~~~v~~~~~~--~---~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 106 ----------------GQCVAT------WK-SPVPVKRVEFS--P---CGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ----------------CCEEEE------EE-CSSCEEEEEEC--T---TSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred ----------------CcEEEE------ee-cCCCeEEEEEc--c---CCCEEEEecCCccCCCCEEEEEEecCC
Confidence 111110 00 12223444565 2 25677777776 89999998764
No 35
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.22 E-value=3.2e-10 Score=114.16 Aligned_cols=121 Identities=10% Similarity=0.082 Sum_probs=85.3
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEecccccc--------------------------------------------ce
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ--------------------------------------------AK 65 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~--------------------------------------------aK 65 (244)
...++|+++|+|. ||+|+.||.|||||..+.+. ..
T Consensus 489 ~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 568 (902)
T 2oaj_A 489 LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPS 568 (902)
T ss_dssp CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEE
T ss_pred CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcccee
Confidence 4689999999998 99999999999999865421 12
Q ss_pred ecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhc-CCccce
Q 044877 66 TAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLA-GVNNKF 143 (244)
Q Consensus 66 t~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~-G~~~~F 143 (244)
..|.++..+|++|++|||| +|++.+ +.+|+|||+. .+..+.-.+- ..+. ||.-.-
T Consensus 569 ~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~---------------------~~~~~~~~~~-~~~~~gh~~~V 625 (902)
T 2oaj_A 569 TAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRR---------------------GPAIIYMENI-REISGAQSACV 625 (902)
T ss_dssp EEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETT---------------------TTEEEEEEEG-GGTCSSCCCCE
T ss_pred EEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECC---------------------CCeEEEEeeh-hHhccccccce
Confidence 3567899999999999999 887666 4789999952 1222210000 1233 665555
Q ss_pred eeeeeeeecCCC---CcceEEEEeeCCeEEEEec
Q 044877 144 HKAQFSWVTENG---KQERHLVATVGKFSVIWNF 174 (244)
Q Consensus 144 t~akFn~~tg~~---~~E~~IvtStG~fvvvWn~ 174 (244)
+...|+..+-.. .+..++++|.+..|.+||+
T Consensus 626 ~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 626 TCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 556666222111 1468889999999999998
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.22 E-value=1.7e-10 Score=97.07 Aligned_cols=115 Identities=18% Similarity=0.207 Sum_probs=79.4
Q ss_pred CCceeEEEecCC-Cc-EEEeCCCCcEEEEecccccc----ceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 30 GTNFQCFASTGD-GS-IVVGSLDGKIRLYSSNSMRQ----AKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 30 ~~~Ft~vats~~-G~-IavGS~dG~IRLyD~~~~r~----aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
...++|++++|+ |. ||+||.||.||+||....+. ....+.++.++|.+++++|||++|++.+ +..|++|+...
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~ 117 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTT 117 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecc
Confidence 345999999996 55 89999999999999854321 1224678999999999999999999777 57799999631
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. .... .............|+ ..+..+++++.+..+.+||+..
T Consensus 118 ~---------------------~~~~------~~~~~~~~~~~~~~~-----~~~~~l~s~s~d~~~~~~d~~~ 159 (340)
T 4aow_A 118 G---------------------TTTR------RFVGHTKDVLSVAFS-----SDNRQIVSGSRDKTIKLWNTLG 159 (340)
T ss_dssp T---------------------EEEE------EEECCSSCEEEEEEC-----TTSSCEEEEETTSCEEEECTTS
T ss_pred c---------------------ceee------eecCCCCceeEEEEe-----ecCccceeecCCCeEEEEEeCC
Confidence 0 0111 011111111222333 2257788889999999999754
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.22 E-value=2.1e-10 Score=102.13 Aligned_cols=69 Identities=16% Similarity=0.211 Sum_probs=60.9
Q ss_pred ceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 32 NFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
.+++++++++|. ||+|+.||.||+||..+.+... .+.++..+|.+|+++|||++|++++ +.+|+|||..
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM-ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 378999999997 9999999999999998776555 5788999999999999999999777 5789999963
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.22 E-value=2.9e-10 Score=98.13 Aligned_cols=133 Identities=13% Similarity=0.058 Sum_probs=88.2
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEecccccc---ceecCCC-CCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ---AKTAFPG-LGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~---aKt~lpg-lGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
-....++++++++|. ||+|+.||.|++||..+.+. .+ .+.+ +..+|.+|+++|||++|++.+ +.+|++||...
T Consensus 99 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 99 LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK-HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCE-EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeee-EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 345689999999987 99999999999999976642 44 3555 999999999999999999777 57899999853
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
........ ....+.+.|....+. .+ ++.-..+...|+ + .++.+++++.+..+.+||++.-
T Consensus 178 ~~~~~~~~---~~~~~~~~~~~~~~~------~~-~~~~~v~~~~~s--p---~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 178 RDVDAKPE---ASVWGSRLPFNTVCA------EY-PSGGWVHAVGFS--P---SGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp SSCC-CCC---SCSSCSCCCEEEEEE------CC-CCSSSEEEEEEC--T---TSSCEEEEETTTEEC-CEECST
T ss_pred cccCCCcc---ccccccccchhhhhh------cc-cCCceEEEEEEC--C---CCCEEEEEeCCCcEEEEECCCC
Confidence 22111000 000111222233333 23 555555566776 3 2568889999999999998753
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.21 E-value=1.7e-10 Score=109.23 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=89.4
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCC------CCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFP------GLGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lp------glGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
....|++++|+|. ||+||.||.|||||..+++..+++.. +|.++|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 191 ~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 191 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 3589999999998 99999999999999877665554323 7899999999999999998776 58899999641
Q ss_pred ccCCCCcc-------------cccccc-c--CCCCCcceeeeeCcc--chhhcCCccceeeeeeeeecCCCCcceEEEEe
Q 044877 103 TDKNGTTK-------------TGFNGR-M--GNKIAAPRLLKLTPL--DSHLAGVNNKFHKAQFSWVTENGKQERHLVAT 164 (244)
Q Consensus 103 ~~~~~~~~-------------~GF~~~-~--~~~kp~pr~L~L~Pe--~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtS 164 (244)
++-... ..|... + +.....-+...+... ...+.||....+...|+ + .+..++++|
T Consensus 271 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~s--p---dg~~l~s~s 343 (611)
T 1nr0_A 271 --LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSS--A---DGKTLFSAD 343 (611)
T ss_dssp --TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEEC--T---TSSEEEEEE
T ss_pred --CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEe--C---CCCEEEEEe
Confidence 100000 000000 0 000000000000000 00234565555566776 2 268899999
Q ss_pred eCCeEEEEechh
Q 044877 165 VGKFSVIWNFQQ 176 (244)
Q Consensus 165 tG~fvvvWn~~k 176 (244)
.+..+.+||+..
T Consensus 344 ~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 344 AEGHINSWDIST 355 (611)
T ss_dssp TTSCEEEEETTT
T ss_pred CCCcEEEEECCC
Confidence 999999999874
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.21 E-value=1.3e-10 Score=96.44 Aligned_cols=115 Identities=14% Similarity=0.153 Sum_probs=84.6
Q ss_pred CCCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCCC
Q 044877 29 RGTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNGT 108 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~~ 108 (244)
.....++++++++|.+++|+.||.|++||..+.+... .+.++..+|++++++|||+.+.++.+..|++||..-
T Consensus 183 ~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~------ 255 (313)
T 3odt_A 183 HNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLR-TYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKEN------ 255 (313)
T ss_dssp CSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTT------
T ss_pred CcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhh-hhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCC------
Confidence 4566899999999999999999999999998776555 467899999999999999754444578899999631
Q ss_pred cccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
.+.++ .+.++....+...|+ + + .+.++++.+..+.+||++.=
T Consensus 256 ---------------~~~~~------~~~~~~~~i~~~~~~--~-~---~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 256 ---------------GSLKQ------VITLPAISIWSVDCM--S-N---GDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp ---------------CCEEE------EEECSSSCEEEEEEC--T-T---SCEEEEETTSCEEEEESCGG
T ss_pred ---------------CceeE------EEeccCceEEEEEEc--c-C---CCEEEEeCCCcEEEEeCCCC
Confidence 11222 122222233444565 3 2 23889999999999998763
No 41
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.21 E-value=5.1e-11 Score=105.70 Aligned_cols=122 Identities=13% Similarity=0.191 Sum_probs=88.6
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
....+|++++|+|. ||+||.||.||+||..+.+... .++++..+|.+++++|||++|++.+ +..++|||..-....
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~-~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~- 143 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTH-AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR- 143 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEE-EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC-
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccce-EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc-
Confidence 34689999999997 9999999999999998776555 5688999999999999999998877 577999997421100
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. ...|..+ .+.||.-......|. + +....++++|.+..+.+||++.
T Consensus 144 ~----------~~~~~~~---------~~~gh~~~v~~~~~~--~--~~~~~l~s~s~D~~i~~wd~~~ 189 (380)
T 3iz6_a 144 D----------GNMPVSR---------VLTGHKGYASSCQYV--P--DQETRLITGSGDQTCVLWDVTT 189 (380)
T ss_dssp C----------CSSTTCC---------BCCCCSSCCCCCBCC--S--SSSSCEEEECTTSCEEEECTTT
T ss_pred c----------CCcccee---------eccCCCcceEEEEEe--c--CCCCEEEEECCCCcEEEEEcCC
Confidence 0 0111111 234554333444555 2 2246789999999999999864
No 42
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.20 E-value=3.3e-10 Score=100.03 Aligned_cols=72 Identities=14% Similarity=0.134 Sum_probs=63.0
Q ss_pred CCceeEEEecCCCc-EEEeCCCCc-EEEEeccccccceecCCC-CCCCeeEEEeCCCCCEEEEeCC-cceEEEEee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGK-IRLYSSNSMRQAKTAFPG-LGSPIRYVDVTYDGRWILGTTD-TYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~-IRLyD~~~~r~aKt~lpg-lGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~ 101 (244)
...++|++++|+|. ||+||.||. ||+||..+++...++..+ +..+|.+|+++|||++|++++. .+|+|||..
T Consensus 195 ~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 195 TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 45699999999998 999999998 999999888777654436 8999999999999999998874 789999974
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.20 E-value=8.1e-10 Score=94.09 Aligned_cols=135 Identities=12% Similarity=0.076 Sum_probs=93.0
Q ss_pred CCCCceeEEEecCCCc-EEEeCCCCcEEEEecccccc---ceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 28 SRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ---AKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 28 ~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~---aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
......++++++++|. ||+|+.||.|++||....+. .+....++..+|.+++++|||++|++.+ +..|++||...
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 173 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYI 173 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCC
T ss_pred cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccc
Confidence 3456689999999997 99999999999999976542 3445567899999999999999999776 57899999754
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
....... .....+.+.+....+. .+.++....+...|+ + .++.+++++.+..+.+||++.
T Consensus 174 ~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~~--~---~~~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 174 KEVEERP---APTPWGSKMPFGELMF------ESSSSCGWVHGVCFS--A---NGSRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp TTTSCCC---CCBTTBSCCCTTCEEE------ECCCCSSCEEEEEEC--S---SSSEEEEEETTTEEEEEEGGG
T ss_pred ccccccc---cccccccccchhhheE------ecCCCCCeEEEEEEC--C---CCCEEEEEeCCCEEEEEECCC
Confidence 3211000 0111112223333333 233444444555666 2 257889999999999999974
No 44
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.20 E-value=2.5e-10 Score=96.48 Aligned_cols=118 Identities=20% Similarity=0.272 Sum_probs=87.5
Q ss_pred CCCceeEEEecCC----Cc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCC-CCCEEEEeC-CcceEEEEee
Q 044877 29 RGTNFQCFASTGD----GS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTY-DGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 29 ~~~~Ft~vats~~----G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~-DG~~lLaT~-~~~L~L~dt~ 101 (244)
....+++++++++ |. ||+|+.||.|++||..+.+... .+.++..+|.+|+++| |+++|++.+ +..|++||..
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK-HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE-EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee-eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 3456999999998 55 9999999999999998776555 5678999999999999 999998877 5789999963
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
- ++ ....+. .+.++....+...|+ + .++.+++++.+..+.+||++.
T Consensus 147 ~----~~--------------~~~~~~------~~~~~~~~v~~~~~~--~---~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 147 T----DT--------------LVAIFG------GVEGHRDEVLSADYD--L---LGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp T----TE--------------EEEEEC------STTSCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEESCS
T ss_pred c----Ce--------------EEEEec------ccccccCceeEEEEC--C---CCCEEEEecCCCCEEEEECCC
Confidence 1 00 011111 112344444555666 2 257888999999999999874
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.20 E-value=3.2e-10 Score=99.04 Aligned_cols=111 Identities=14% Similarity=0.151 Sum_probs=83.6
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCCCcc
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNGTTK 110 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~~~~ 110 (244)
..+.+.+++|. ||+|+.||.|++||..+.+. ...+.++..+|++|+++|||++|++.+. ..|++||..- +
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~----~--- 171 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQ-REIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKD----G--- 171 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEE-EEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT----C---
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcce-eeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCC----C---
Confidence 44556788887 99999999999999987654 4467889999999999999999987774 7799999631 0
Q ss_pred cccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 111 TGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 111 ~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+.++ .+.++.-..+...|+ + .+..+++++.+..+.+||++.
T Consensus 172 --------------~~~~------~~~~h~~~v~~~~~~--~---~~~~l~s~~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 172 --------------SNPR------TLIGHRATVTDIAII--D---RGRNVLSASLDGTIRLWECGT 212 (420)
T ss_dssp --------------CCCE------EEECCSSCEEEEEEE--T---TTTEEEEEETTSCEEEEETTT
T ss_pred --------------cCce------EEcCCCCcEEEEEEc--C---CCCEEEEEcCCCcEEEeECCC
Confidence 1111 223444444556776 2 257888999999999999874
No 46
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.20 E-value=2.2e-10 Score=108.49 Aligned_cols=121 Identities=16% Similarity=0.182 Sum_probs=88.4
Q ss_pred CCceeEEEecCCCc--EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 30 GTNFQCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 30 ~~~Ft~vats~~G~--IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
....++++++|+|. ||+||.||.||+||....+..+ .|.+|.++|.+|+++|||++|++.+ +.+|+|||..-
T Consensus 147 ~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~-~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~---- 221 (611)
T 1nr0_A 147 ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS-TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD---- 221 (611)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE-EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----
T ss_pred CCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee-eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC----
Confidence 34589999999884 9999999999999987776555 5789999999999999999998776 58899999631
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++ ..-.+....+...+|.-.-+...|+ + .++.++++|.+..+.+||++.
T Consensus 222 g~----------------~~~~~~~~~~~~~~h~~~V~~v~~s--p---dg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 222 GT----------------KTGVFEDDSLKNVAHSGSVFGLTWS--P---DGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp CC----------------EEEECBCTTSSSCSSSSCEEEEEEC--T---TSSEEEEEETTSEEEEEETTT
T ss_pred Cc----------------EeeeeccccccccccCCCEEEEEEC--C---CCCEEEEEeCCCeEEEEeCCC
Confidence 11 0001111111122454444555676 2 257899999999999999864
No 47
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.20 E-value=2e-10 Score=104.46 Aligned_cols=114 Identities=15% Similarity=0.159 Sum_probs=88.5
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCC-CCCCeeEEEeCC----------CCCEEEEeC-Ccce
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPG-LGSPIRYVDVTY----------DGRWILGTT-DTYL 95 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpg-lGdPI~~vdvS~----------DG~~lLaT~-~~~L 95 (244)
.....++++++++|. ||+|+.||.|++||..+.+..+ .+.+ +..+|++++++| ||++|++.+ +..|
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT-SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCccee-EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 345699999999998 9999999999999998776555 4666 999999999999 999999877 5789
Q ss_pred EEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 96 ILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 96 ~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
+|||..- ..+.++ .+.++.-..+...|+ + + +. +++++.+..+.+||++
T Consensus 566 ~iw~~~~--------------------~~~~~~------~~~~h~~~v~~l~~s--~-~--~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 566 FIYSVKR--------------------PMKIIK------ALNAHKDGVNNLLWE--T-P--ST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp EEEESSC--------------------TTCCEE------ETTSSTTCEEEEEEE--E-T--TE-EEEEETTSCEEEEEEC
T ss_pred EEEECCC--------------------Cceech------hhhcCccceEEEEEc--C-C--CC-eEEecCCceEEEEeee
Confidence 9999731 002333 234444455666777 3 2 34 8899999999999985
No 48
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.20 E-value=2.3e-10 Score=101.41 Aligned_cols=120 Identities=15% Similarity=0.162 Sum_probs=82.5
Q ss_pred CCceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 30 GTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 30 ~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
.....++++++ ++. +++||.||.||+||.+........+.++..+|.+|+++|||++|++++ +.+|+|||..-
T Consensus 205 ~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~---- 280 (380)
T 3iz6_a 205 TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT---- 280 (380)
T ss_dssp CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT----
T ss_pred ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC----
Confidence 34578888877 666 999999999999998643233335788999999999999999999887 47899999741
Q ss_pred CCcccccccccCCCCCcceeeee-CccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKL-TPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L-~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
+ ..++. ..+.....+..-..+...|+ + .++.+++++.+..+.+||+.
T Consensus 281 ~-----------------~~~~~~~~~~~~~~~~~~~v~~~~~s--~---~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 281 G-----------------HQLQVYNREPDRNDNELPIVTSVAFS--I---SGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp T-----------------EEEEEECCCCSSSCCSSCSCSEEEEC--S---SSSEEEEECTTSCEEEEETT
T ss_pred C-----------------cEEEEecccccccccccCceEEEEEC--C---CCCEEEEEECCCCEEEEECC
Confidence 1 11110 00000000011112344666 2 26889999999999999974
No 49
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.19 E-value=8e-11 Score=101.86 Aligned_cols=118 Identities=11% Similarity=0.086 Sum_probs=85.2
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEecccccc-ceecCCCCCCCeeEEEeCC--CCCEEEEeC-CcceEEEEeeeccC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ-AKTAFPGLGSPIRYVDVTY--DGRWILGTT-DTYLILICTLFTDK 105 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~-aKt~lpglGdPI~~vdvS~--DG~~lLaT~-~~~L~L~dt~~~~~ 105 (244)
...++++++++|. ||+||.||.|||||..+++. ....|.+|.++|.+|++++ +|++|++.+ +.+|+|||..-
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~--- 90 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN--- 90 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS---
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC---
Confidence 4589999999998 99999999999999865432 2335789999999999997 489888766 68899999631
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+ ....+. .+.|+.-..+...|+ + .+.+..++++|.+..+.+||++.
T Consensus 91 -~---------------~~~~~~------~~~~h~~~V~~v~~~--p-~~~g~~lasgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 91 -G---------------TWEKSH------EHAGHDSSVNSVCWA--P-HDYGLILACGSSDGAISLLTYTG 136 (316)
T ss_dssp -S---------------CCCEEE------EECCCSSCCCEEEEC--C-TTTCSCEEEECSSSCEEEEEECS
T ss_pred -C---------------cceEEE------EccCCCCceEEEEEC--C-CCCCcEEEEEcCCCCEEEEecCC
Confidence 0 001111 233444334455666 2 12257888999999999999864
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.19 E-value=3.3e-11 Score=104.08 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=82.8
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEecccc--ccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSM--RQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~--r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
.+.+|++++++|. ||+|+.||.|++||..+. +..+ .+.++..+|.+|+++|||++|++.+ +..|+|||..-. .
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~--~ 88 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHAR-TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD--G 88 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECC-CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--------
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEE-EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC--C
Confidence 3689999999998 999999999999999765 4344 5788999999999999999998777 578999997421 0
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
. ..+ .+ .+.++.-..+...|+ + .+..+++++.+..+.+||++.-
T Consensus 89 -------~-------~~~-~~-------~~~~~~~~v~~~~~~--~---~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 89 -------T-------WKQ-TL-------VLLRLNRAATFVRWS--P---NEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp -------C-------CCC-EE-------ECCCCSSCEEEEECC--T---TSSCCEEEESSSCEEECCC---
T ss_pred -------c-------eee-ee-------EecccCCceEEEEEC--C---CCCEEEEEecCCeEEEEEECCc
Confidence 0 001 11 123334344555666 2 2578899999999999998753
No 51
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.18 E-value=3.7e-10 Score=94.14 Aligned_cols=67 Identities=16% Similarity=0.145 Sum_probs=56.9
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceec-CCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTA-FPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~-lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
.++++.|+++.||+|. ||.|||||..+++..+++ +.+++.+|++|+++|||++|++.+ +.+|+|||.
T Consensus 28 ~~~l~WS~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 28 LNLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp CBCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 3789999998788875 999999999887766543 467889999999999999999777 578999996
No 52
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.18 E-value=3.2e-10 Score=101.01 Aligned_cols=129 Identities=17% Similarity=0.185 Sum_probs=85.9
Q ss_pred CCCCceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceec------CCCCCCCeeEEEeCCCCCEEEEeC-CcceEEE
Q 044877 28 SRGTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTA------FPGLGSPIRYVDVTYDGRWILGTT-DTYLILI 98 (244)
Q Consensus 28 ~~~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~------lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~ 98 (244)
.....++++++++ +|. ||+|+.||.||+||..+++...++ ..++.++|.+|+++|||++|++.+ +..|+||
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 3445688999999 787 999999999999999766544322 257889999999999999999877 5789999
Q ss_pred EeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 99 CTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 99 dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
|..-..... . . ........+. .+.|+........|+ . .++.++++|.+..+.+||++.
T Consensus 284 d~~~~~~~~------~--~-~~~~~~~~~~------~~~~h~~~v~~~~~~--~---~~~~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 284 NLQNANNKS------D--S-KTPNSGTCEV------TYIGHKDFVLSVATT--Q---NDEYILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp EC------------------------CEEE------EEECCSSCEEEEEEC--G---GGCEEEEEETTSEEEEEETTT
T ss_pred ECCCCCCcc------c--c-cCCCCCcceE------EEecccCcEEEEEEC--C---CCCEEEEEeCCCeEEEEECCC
Confidence 975311000 0 0 0000111121 345555434444565 2 257888999999999999763
No 53
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.18 E-value=2.4e-10 Score=100.82 Aligned_cols=120 Identities=18% Similarity=0.212 Sum_probs=87.7
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
...++|++++++|. ||+||.||.||+||..+.+... .++.+..+|.+++++|||++|++.+ ++.+++|+..... .
T Consensus 64 ~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~-~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~--~ 140 (354)
T 2pbi_B 64 GNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEH-AVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDK--N 140 (354)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCT--T
T ss_pred CCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcce-EEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccc--c
Confidence 34589999999997 9999999999999987766544 4677888999999999999999887 4779999975321 1
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+ .. ...+. +.++........|+ + .+..++++|.+..+.+||++.
T Consensus 141 ~~---~~-------~~~~~---------~~~h~~~v~~~~~~--~---~~~~l~t~s~D~~v~lwd~~~ 185 (354)
T 2pbi_B 141 EN---MA-------AKKKS---------VAMHTNYLSACSFT--N---SDMQILTASGDGTCALWDVES 185 (354)
T ss_dssp CC---SG-------GGCEE---------EEECSSCEEEEEEC--S---SSSEEEEEETTSEEEEEETTT
T ss_pred cc---cc-------cccee---------eeccCCcEEEEEEe--C---CCCEEEEEeCCCcEEEEeCCC
Confidence 00 00 01111 22333344455665 2 257899999999999999864
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.18 E-value=2.3e-10 Score=97.43 Aligned_cols=116 Identities=15% Similarity=0.193 Sum_probs=85.5
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccc--cceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMR--QAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDK 105 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r--~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~ 105 (244)
..+.+|++++++|. ||+|+.||.|++||..+.+ ..+ .++++..+|.+++++|||++|++.+. ..|++||..-
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~--- 83 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVH-ELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG--- 83 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEE-EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET---
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeee-eecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC---
Confidence 34689999999998 9999999999999997654 344 46789999999999999999998774 7799999731
Q ss_pred CCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++ . . ..+. +.++....+...|+ + .+..+++++.+..+.+||++.
T Consensus 84 -~~----~---------~-~~~~-------~~~~~~~v~~~~~~--~---~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 84 -RT----W---------K-PTLV-------ILRINRAARCVRWA--P---NEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp -TE----E---------E-EEEE-------CCCCSSCEEEEEEC--T---TSSEEEEEETTSSEEEEEEET
T ss_pred -Ce----e---------e-eeEE-------eecCCCceeEEEEC--C---CCCEEEEEeCCCEEEEEEecC
Confidence 00 0 0 1111 12233333445665 2 257888889999999999875
No 55
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.18 E-value=5.4e-10 Score=99.42 Aligned_cols=113 Identities=13% Similarity=0.142 Sum_probs=80.9
Q ss_pred eeEEEecCCCc-E--EEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCCCc
Q 044877 33 FQCFASTGDGS-I--VVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNGTT 109 (244)
Q Consensus 33 Ft~vats~~G~-I--avGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~~~ 109 (244)
..+|+++|+|. + |+|+.||.||+||..+++...+ + .++.+|.+|++||||++|++++++.+++|+..- +
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~-~-~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~----~-- 207 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFE-I-ETRGEVKDLHFSTDGKVVAYITGSSLEVISTVT----G-- 207 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEE-E-ECSSCCCEEEECTTSSEEEEECSSCEEEEETTT----C--
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEE-e-CCCCceEEEEEccCCceEEeccceeEEEEEecc----C--
Confidence 56899999998 4 4566899999999988765543 3 477899999999999999999998888888531 1
Q ss_pred ccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCC----eEEEEechhh
Q 044877 110 KTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGK----FSVIWNFQQV 177 (244)
Q Consensus 110 ~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~----fvvvWn~~kV 177 (244)
...... ...++...+....|+ + + +...+++|.+. .+..|++..-
T Consensus 208 -------------~~~~~~------~~~~~~~~v~~v~fs--p-d--g~~l~~~s~d~~~~~~i~~~~~~~~ 255 (365)
T 4h5i_A 208 -------------SCIARK------TDFDKNWSLSKINFI--A-D--DTVLIAASLKKGKGIVLTKISIKSG 255 (365)
T ss_dssp -------------CEEEEE------CCCCTTEEEEEEEEE--E-T--TEEEEEEEESSSCCEEEEEEEEETT
T ss_pred -------------cceeee------ecCCCCCCEEEEEEc--C-C--CCEEEEEecCCcceeEEeecccccc
Confidence 001111 123344556667887 2 2 57777887766 7888987643
No 56
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.16 E-value=3.8e-10 Score=99.06 Aligned_cols=123 Identities=11% Similarity=0.134 Sum_probs=90.1
Q ss_pred CceeEEEecCCC---cEEEeCCCCcEEEEecccccc---------------------------------------ceecC
Q 044877 31 TNFQCFASTGDG---SIVVGSLDGKIRLYSSNSMRQ---------------------------------------AKTAF 68 (244)
Q Consensus 31 ~~Ft~vats~~G---~IavGS~dG~IRLyD~~~~r~---------------------------------------aKt~l 68 (244)
..++++++++++ .+++|+.||.||+||....+. .+..+
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 568999999987 499999999999999865322 12335
Q ss_pred CCCCCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeee
Q 044877 69 PGLGSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQF 148 (244)
Q Consensus 69 pglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akF 148 (244)
.++..+|.+|+++|||++|++..+..|+|||..... ..-+.+.++|. .+.++....+...|
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~-----------------~~~~~~~~~~~--~~~~~~~~v~~~~~ 234 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSADDLRINLWHLEITD-----------------RSFNIVDIKPA--NMEELTEVITAAEF 234 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEE-----------------EEEEEEECCCS--SGGGCCCCEEEEEE
T ss_pred cCCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCC-----------------ceeeeeecccc--cccccCcceEEEEE
Confidence 789999999999999999998777889999974210 11223444444 23444444556677
Q ss_pred eeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 149 SWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 149 n~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+ + +....+++++.+..+.+||++.
T Consensus 235 ~--p--~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 235 H--P--NSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp C--S--SCTTEEEEEETTSCEEEEETTT
T ss_pred C--C--CCCcEEEEEeCCCeEEEEECcC
Confidence 6 2 2137899999999999999875
No 57
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.16 E-value=3.2e-10 Score=99.07 Aligned_cols=137 Identities=16% Similarity=0.163 Sum_probs=88.9
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
-....+|++++|+|. ||+|+.||.|++||..+.+..+ .+.++..+|.+|+++|||++|++.+ +.+|++||..-
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~---- 212 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR-TLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT---- 212 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE-EEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT----
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce-EEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC----
Confidence 345689999999997 9999999999999998776555 4678999999999999999999777 57799999741
Q ss_pred CCcccccccccCCCCCcceeeeeCccchh--hcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSH--LAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~--~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++-..-|.... ........+.+.|.+-. ...+....+...|+ + .++.+++++.+..+.+||++.
T Consensus 213 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s--~---~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 213 GTTIHTFNRKE-NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFG--T---YGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp TEEEEEECBTT-BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSS--C---TTEEEEEEETTSCEEEEETTT
T ss_pred CceeEEeecCC-CCCCCccEEEEecCCcceeeecccCcccceEEc--C---CCCEEEEEcCCCeEEEEECCC
Confidence 11000011000 01111222222222111 01111122233454 2 257888899999999999864
No 58
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.16 E-value=4.6e-10 Score=99.07 Aligned_cols=113 Identities=12% Similarity=0.183 Sum_probs=86.0
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCC--CCCEEEEeC-CcceEEEEeeeccCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTY--DGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~--DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
..++++++++++. |++||.||.||+||..+++..+ .+.++..+|..++++| +|++|++.+ +..|++||..-
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---- 229 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ-SFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS---- 229 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT----
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE-EEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC----
Confidence 4478999999886 9999999999999998776555 5788999999999987 578888766 68899999631
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++....+...|+ + .+..++++|.+..+.+||++.
T Consensus 230 -----------------~~~~~------~~~~h~~~v~~v~~~--p---~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 230 -----------------GQCVQ------AFETHESDVNSVRYY--P---SGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp -----------------CCEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTT
T ss_pred -----------------CcEEE------EecCCCCCeEEEEEe--C---CCCEEEEEeCCCeEEEEECCC
Confidence 11222 233444444555666 2 257899999999999999875
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.15 E-value=4.9e-10 Score=98.86 Aligned_cols=114 Identities=11% Similarity=0.027 Sum_probs=83.9
Q ss_pred CCceeEEEecC-CCc-EEEeCCCCcEEEEecccc-------ccceecCCCCCCCeeEEEeCCCCC-EEEEeC-CcceEEE
Q 044877 30 GTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSM-------RQAKTAFPGLGSPIRYVDVTYDGR-WILGTT-DTYLILI 98 (244)
Q Consensus 30 ~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~-------r~aKt~lpglGdPI~~vdvS~DG~-~lLaT~-~~~L~L~ 98 (244)
....+++++++ +|. ||+|+.||.|++||..+. +... .+.++..+|.+|+++|||+ +|++.+ +..|++|
T Consensus 81 ~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 81 TAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVI-TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSE-EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceE-EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 45689999999 776 999999999999999765 2233 4678999999999999994 666555 5779999
Q ss_pred EeeeccCCCCcccccccccCCCCCcceeeeeCccchhh--cCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 99 CTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHL--AGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 99 dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~--~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
|..- .+.+. .+ .++.-..+...|+ + .+..+++++.+..+.+||++.
T Consensus 160 d~~~---------------------~~~~~------~~~~~~~~~~v~~~~~~--~---~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 160 DVGT---------------------GAAVL------TLGPDVHPDTIYSVDWS--R---DGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ETTT---------------------TEEEE------EECTTTCCSCEEEEEEC--T---TSSCEEEEETTSEEEEEETTT
T ss_pred ECCC---------------------CCccE------EEecCCCCCceEEEEEC--C---CCCEEEEEecCCcEEEEeCCC
Confidence 9631 11111 11 2333344555666 2 257889999999999999875
No 60
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.14 E-value=1.5e-09 Score=93.00 Aligned_cols=73 Identities=14% Similarity=0.136 Sum_probs=59.1
Q ss_pred CCCceeEEEecCCCc--EEEeCCCCcEEEEecccccccee---------------cCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 29 RGTNFQCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAKT---------------AFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 29 ~~~~Ft~vats~~G~--IavGS~dG~IRLyD~~~~r~aKt---------------~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
....++|++++|+|. +|+|+.||.|++||......... .+.++..+|.+++++|||++|++.+
T Consensus 185 ~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 264 (408)
T 4a11_B 185 HRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVG 264 (408)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEec
Confidence 345689999999986 88999999999999965431111 2257889999999999999999777
Q ss_pred -CcceEEEEee
Q 044877 92 -DTYLILICTL 101 (244)
Q Consensus 92 -~~~L~L~dt~ 101 (244)
+..|++||..
T Consensus 265 ~dg~i~vwd~~ 275 (408)
T 4a11_B 265 TDNRMRLWNSS 275 (408)
T ss_dssp TTSCEEEEETT
T ss_pred CCCeEEEEECC
Confidence 5789999974
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.14 E-value=4.8e-10 Score=96.92 Aligned_cols=123 Identities=17% Similarity=0.215 Sum_probs=84.1
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCC---C---CCCeeEEEeCCCCCEEEEeCC----cceEEEE
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPG---L---GSPIRYVDVTYDGRWILGTTD----TYLILIC 99 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpg---l---GdPI~~vdvS~DG~~lLaT~~----~~L~L~d 99 (244)
....++++++++|.+++|+.||.|++||..+.+... .+++ + ..+|.+++++|||++|++.+. ..|++||
T Consensus 186 ~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d 264 (397)
T 1sq9_A 186 SQFATSVDISERGLIATGFNNGTVQISELSTLRPLY-NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 264 (397)
T ss_dssp CCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEE-EEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred CCCceEEEECCCceEEEEeCCCcEEEEECCCCceeE-EEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEE
Confidence 556899999998889999999999999998765444 4566 7 899999999999999998875 4799999
Q ss_pred eeeccCCCCcccccccccCCCCCcceeeee--Cccchhhc--CCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 100 TLFTDKNGTTKTGFNGRMGNKIAAPRLLKL--TPLDSHLA--GVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 100 t~~~~~~~~~~~GF~~~~~~~kp~pr~L~L--~Pe~~~~~--G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
..- ++ ..+.+.. .|+..... .+....+...|+ + .++.+++++.+..+.+||++
T Consensus 265 ~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~---~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 265 TEF----GE--------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFN--D---SGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp TTT----CC--------------EEEEECBC--------CCBSBSSCEEEEEEC--S---SSSEEEEEETTSEEEEEETT
T ss_pred CCC----Cc--------------ccceeccCcccccccccccccCCcEEEEEEC--C---CCCEEEEEeCCCeEEEEEcC
Confidence 741 10 0111110 01110000 022233444555 2 25788889999999999986
Q ss_pred h
Q 044877 176 Q 176 (244)
Q Consensus 176 k 176 (244)
.
T Consensus 322 ~ 322 (397)
T 1sq9_A 322 T 322 (397)
T ss_dssp T
T ss_pred C
Confidence 4
No 62
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.14 E-value=4.5e-10 Score=98.64 Aligned_cols=85 Identities=12% Similarity=0.152 Sum_probs=65.0
Q ss_pred ceecccccccCC-------CCceeEEEecCCCc-EEEeCCCCcEEEEecccccc----------ceecCCCCC-------
Q 044877 18 VLNWSQGHQFSR-------GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ----------AKTAFPGLG------- 72 (244)
Q Consensus 18 ~~~~~~~k~Y~~-------~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~----------aKt~lpglG------- 72 (244)
.++|.-...|.. ...++|++++++|. ||+|+.||.||+||..+.+. ....+.++.
T Consensus 9 ~~~w~~~q~~~~~~~~~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 88 (447)
T 3dw8_B 9 DIQWCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLK 88 (447)
T ss_dssp CCCCEEEECCSCSSSCCCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGG
T ss_pred ceeEEEEEecccccccccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccc
Confidence 345554444544 46799999999997 99999999999999876542 233467887
Q ss_pred -----CCeeEEEeCCCC--CEEEEeC-CcceEEEEeee
Q 044877 73 -----SPIRYVDVTYDG--RWILGTT-DTYLILICTLF 102 (244)
Q Consensus 73 -----dPI~~vdvS~DG--~~lLaT~-~~~L~L~dt~~ 102 (244)
.+|.+|+++|++ .+|++++ +.+|+|||..-
T Consensus 89 ~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~ 126 (447)
T 3dw8_B 89 SLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISE 126 (447)
T ss_dssp TEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEE
T ss_pred cccccCceEEEEEcCCCCcceEEEeCCCCeEEEEeccc
Confidence 899999999998 7777666 58899999764
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.14 E-value=5.8e-10 Score=93.14 Aligned_cols=119 Identities=11% Similarity=0.165 Sum_probs=83.5
Q ss_pred cCCCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceec--C--CCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 27 FSRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTA--F--PGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 27 Y~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~--l--pglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
.......++++++++|. |++|+ ||.|++||..+....+.. + .++..+|.+++++|||++|++.+ +..|++||.
T Consensus 48 ~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp ECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred ccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 34566789999999998 88888 999999999754322211 1 26889999999999999999777 477999996
Q ss_pred eeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 101 LFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 101 ~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.- +.++.+. .+.++....+...|+ + .+..+++++.+..+.+||++.
T Consensus 127 ~~-------------------~~~~~~~------~~~~~~~~i~~~~~~--~---~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 127 AA-------------------PTPRIKA------ELTSSAPACYALAIS--P---DSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CC-------------------C--EEEE------EEECSSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTT
T ss_pred CC-------------------CCcceee------ecccCCCceEEEEEC--C---CCCEEEEEeCCCcEEEEeCCC
Confidence 31 1111222 122333333444565 2 257888888999999999864
No 64
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.14 E-value=9.9e-10 Score=90.78 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=59.9
Q ss_pred CCCceeEEEecC--CCc-EEEeCCCCcEEEEeccccc---------cceecCCCCCCCeeEEEeCCC--CCEEEEeC-Cc
Q 044877 29 RGTNFQCFASTG--DGS-IVVGSLDGKIRLYSSNSMR---------QAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DT 93 (244)
Q Consensus 29 ~~~~Ft~vats~--~G~-IavGS~dG~IRLyD~~~~r---------~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~ 93 (244)
.....+|+++++ +|. ||+|+.||.||+||..+.+ ... .+.++..+|.+|+++|| |++|++++ +.
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg 134 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLC-TLNDSKGSLYSVKFAPAHLGLKLACLGNDG 134 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEE-EECCCSSCEEEEEECCGGGCSEEEEEETTC
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceee-eecccCCceeEEEEcCCCCCcEEEEecCCC
Confidence 455699999999 466 9999999999999997642 233 46789999999999999 99999877 57
Q ss_pred ceEEEEee
Q 044877 94 YLILICTL 101 (244)
Q Consensus 94 ~L~L~dt~ 101 (244)
.|++||..
T Consensus 135 ~v~iwd~~ 142 (351)
T 3f3f_A 135 ILRLYDAL 142 (351)
T ss_dssp EEEEEECS
T ss_pred cEEEecCC
Confidence 79999975
No 65
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.14 E-value=4.9e-10 Score=96.84 Aligned_cols=71 Identities=14% Similarity=0.134 Sum_probs=61.9
Q ss_pred CCceeEEEecCCCc-EEEeCCC---CcEEEEeccccccceecCCC-------------CCCCeeEEEeCCCCCEEEEeC-
Q 044877 30 GTNFQCFASTGDGS-IVVGSLD---GKIRLYSSNSMRQAKTAFPG-------------LGSPIRYVDVTYDGRWILGTT- 91 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~d---G~IRLyD~~~~r~aKt~lpg-------------lGdPI~~vdvS~DG~~lLaT~- 91 (244)
....++++++++|. |++|+.| |.|++||..+.+... .+.+ +..+|.+++++|||++|++.+
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 311 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG-SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW 311 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEE-EECBC--------CCBSBSSCEEEEEECSSSSEEEEEET
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccc-eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC
Confidence 66799999999988 9999999 999999998776555 4666 899999999999999999887
Q ss_pred CcceEEEEee
Q 044877 92 DTYLILICTL 101 (244)
Q Consensus 92 ~~~L~L~dt~ 101 (244)
+..|++||..
T Consensus 312 dg~i~iwd~~ 321 (397)
T 1sq9_A 312 DGKLRFWDVK 321 (397)
T ss_dssp TSEEEEEETT
T ss_pred CCeEEEEEcC
Confidence 5779999973
No 66
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.14 E-value=5.5e-10 Score=94.29 Aligned_cols=134 Identities=12% Similarity=0.067 Sum_probs=86.5
Q ss_pred CCCceeEEEecC---CCc-EEEeCCCCcEEEEeccccccceec----CCCCCCCeeEEEeCCCCCE-EEEeC-CcceEEE
Q 044877 29 RGTNFQCFASTG---DGS-IVVGSLDGKIRLYSSNSMRQAKTA----FPGLGSPIRYVDVTYDGRW-ILGTT-DTYLILI 98 (244)
Q Consensus 29 ~~~~Ft~vats~---~G~-IavGS~dG~IRLyD~~~~r~aKt~----lpglGdPI~~vdvS~DG~~-lLaT~-~~~L~L~ 98 (244)
....+++++++| +|. +++|+.||.|++||..+.+..++. ++++..+|.+++++|||++ |++.+ +..|+||
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 287 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLW 287 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEe
Confidence 356789999999 776 999999999999999766544321 1389999999999999994 55444 5789999
Q ss_pred EeeeccCCCCcccccc--cccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEE-EEeeCCeEEEEech
Q 044877 99 CTLFTDKNGTTKTGFN--GRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHL-VATVGKFSVIWNFQ 175 (244)
Q Consensus 99 dt~~~~~~~~~~~GF~--~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~I-vtStG~fvvvWn~~ 175 (244)
|....... .-+. ..+.......+.+. .+.++....+...|+ + .++.++ .++.+..+.+||+.
T Consensus 288 d~~~~~~~----~~~~~~g~~~~~~~~~~~~~------~~~~~~~~v~~~~~s--~---~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 288 KYEYPIQR----SKKDSEGIEMGVAGSVSLLQ------NVTLSTQPISSLDWS--P---DKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEECCSCC------CCTTSCCCCCCCEEEEEE------EEECCSSCEEEEEEC--S---SSTTEEEEEETTSEEEEEEEC
T ss_pred ecCCCccc----ccccCCCCccccccccceee------ccccCCCCeeEEEEc--C---CCCeEEEEecCCCcEEEEECC
Confidence 98642111 0000 00000001113333 344444444555666 2 246666 58889999999997
Q ss_pred hh
Q 044877 176 QV 177 (244)
Q Consensus 176 kV 177 (244)
+.
T Consensus 353 ~~ 354 (357)
T 3i2n_A 353 KL 354 (357)
T ss_dssp C-
T ss_pred Cc
Confidence 54
No 67
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.14 E-value=4.7e-10 Score=107.14 Aligned_cols=118 Identities=23% Similarity=0.275 Sum_probs=87.5
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGT 108 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~ 108 (244)
..++|++++++|. |++||.||.||+||..+++..+ .+.+|..+|.+|+++|||++|++.+ +.+|+|||..- .
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~-----~ 504 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR-RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-----E 504 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-----C
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee-EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-----C
Confidence 4589999999998 9999999999999998776555 4678999999999999999999777 57899999521 0
Q ss_pred cccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
....+.. ...+|....+...|+. .+....++++|.+..|.+||++.
T Consensus 505 ----------------~~~~~~~---~~~~h~~~v~~~~~~~---~~~~~~l~s~s~d~~v~vwd~~~ 550 (694)
T 3dm0_A 505 ----------------CKYTISE---GGEGHRDWVSCVRFSP---NTLQPTIVSASWDKTVKVWNLSN 550 (694)
T ss_dssp ----------------EEEEECS---STTSCSSCEEEEEECS---CSSSCEEEEEETTSCEEEEETTT
T ss_pred ----------------cceeecc---CCCCCCCcEEEEEEeC---CCCcceEEEEeCCCeEEEEECCC
Confidence 0111110 1123443445557762 22346788999999999999864
No 68
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.13 E-value=5.2e-10 Score=94.47 Aligned_cols=137 Identities=13% Similarity=0.047 Sum_probs=89.4
Q ss_pred CCCceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceec--CCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeec
Q 044877 29 RGTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTA--FPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFT 103 (244)
Q Consensus 29 ~~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~--lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~ 103 (244)
....++++++++ +|. ||+|+.||.|++||..+++...++ +.++..+|.+|+++|||++|++.+ +..|++||..-.
T Consensus 114 ~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 193 (366)
T 3k26_A 114 HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSK 193 (366)
T ss_dssp CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSH
T ss_pred CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCC
Confidence 456699999999 887 999999999999999876644432 268999999999999999999887 478999997521
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCc------cchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTP------LDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~P------e~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
+...-+...+. -.|....+...+ +-....++....+...|+ ++.+++++.+..+.+||+..-
T Consensus 194 ----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 194 ----RMMNAIKESYD-YNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-------GDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp ----HHHHHHHHHHT-CCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-------TTEEEEECSSSEEEEEEESST
T ss_pred ----ccccccceeEE-ecCCCCcccccceeeccCccccccCCcceEEEEEEc-------CCEEEEEecCCEEEEEeCCCc
Confidence 10011111000 001111111111 111122233334444554 368999999999999998654
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.12 E-value=4.4e-10 Score=106.82 Aligned_cols=114 Identities=8% Similarity=0.164 Sum_probs=87.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~ 107 (244)
....+|++++|+|. ||+|+.||.|++||..+++..+ .+.++..+|++++++|||++|++.+. ..|++||..-
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~----- 86 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNT----- 86 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTT-----
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCC-----
Confidence 34589999999998 9999999999999988776555 46789999999999999999998775 7799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++.-..+...|+ + .+..+++++.+..+.+||++.
T Consensus 87 ----------------~~~~~------~~~~~~~~v~~~~~s--~---~~~~l~~~~~dg~i~vw~~~~ 128 (814)
T 3mkq_A 87 ----------------GEKVV------DFEAHPDYIRSIAVH--P---TKPYVLSGSDDLTVKLWNWEN 128 (814)
T ss_dssp ----------------CCEEE------EEECCSSCEEEEEEC--S---SSSEEEEEETTSEEEEEEGGG
T ss_pred ----------------CcEEE------EEecCCCCEEEEEEe--C---CCCEEEEEcCCCEEEEEECCC
Confidence 11222 223343344455666 2 256788889999999999864
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.12 E-value=1.5e-09 Score=90.64 Aligned_cols=117 Identities=10% Similarity=0.193 Sum_probs=85.3
Q ss_pred CCCCceeEEEecCCCc-EEEeCCCCcEEEEecccccc-ceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeecc
Q 044877 28 SRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ-AKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTD 104 (244)
Q Consensus 28 ~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~-aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~ 104 (244)
......++++++++|. |++|+.||.|++||..+.+. ....+.++..+|.+++++|||++|++.+ +..|++||..-
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-- 172 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-- 172 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT--
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC--
Confidence 3456799999999997 99999999999999976541 2335678899999999999999999776 47799999631
Q ss_pred CCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 105 KNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 105 ~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++.-..+...|+ + .++.+++++.+..+.+||++.
T Consensus 173 -------------------~~~~~------~~~~~~~~i~~~~~~--~---~~~~l~~~~~dg~i~~~d~~~ 214 (337)
T 1gxr_A 173 -------------------QTLVR------QFQGHTDGASCIDIS--N---DGTKLWTGGLDNTVRSWDLRE 214 (337)
T ss_dssp -------------------TEEEE------EECCCSSCEEEEEEC--T---TSSEEEEEETTSEEEEEETTT
T ss_pred -------------------Cceee------eeecccCceEEEEEC--C---CCCEEEEEecCCcEEEEECCC
Confidence 11111 122223333444555 2 257888888999999999875
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.12 E-value=2.1e-10 Score=101.59 Aligned_cols=134 Identities=15% Similarity=0.206 Sum_probs=90.3
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEE----EeCCCCCEEEEeCC-cceEEEEeeec
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYV----DVTYDGRWILGTTD-TYLILICTLFT 103 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~v----dvS~DG~~lLaT~~-~~L~L~dt~~~ 103 (244)
...++|++++++|. ||+|+.||.||+||..+.+..++.-.++..+|++| ++++||++|++.+. ..|+|||..-
T Consensus 214 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~- 292 (437)
T 3gre_A 214 HGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK- 292 (437)
T ss_dssp GCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT-
T ss_pred CCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC-
Confidence 35799999999998 99999999999999988766665433577799999 66678999998875 6799999741
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCcc-----chhhcC--CccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPL-----DSHLAG--VNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe-----~~~~~G--~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++ ....+......+..+...|. +..+.| +....+...|+ + ++.+++++.+..|.+||++.
T Consensus 293 ---~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~----~--~~~l~s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 293 ---GH----CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS----N--DKILLTDEATSSIVMFSLNE 359 (437)
T ss_dssp ---TE----EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE----T--TEEEEEEGGGTEEEEEETTC
T ss_pred ---Cc----EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC----C--ceEEEecCCCCeEEEEECCC
Confidence 11 11111111112223333332 223344 33344444665 1 37788888899999999875
Q ss_pred h
Q 044877 177 V 177 (244)
Q Consensus 177 V 177 (244)
-
T Consensus 360 ~ 360 (437)
T 3gre_A 360 L 360 (437)
T ss_dssp G
T ss_pred c
Confidence 4
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.11 E-value=6.8e-10 Score=111.44 Aligned_cols=116 Identities=10% Similarity=0.176 Sum_probs=89.0
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
...++|++++++|. ||+|+.||.|++||..+++... .++++.++|+++++||||++|++.+ +..|++||..-
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~----- 688 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT----- 688 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE-EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC-----
Confidence 35589999999998 9999999999999998876555 4689999999999999999999877 47799999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.++ .+.++....+...|+ + .+....+++++.+..+.+||+..
T Consensus 689 ----------------~~~~~------~~~~~~~~v~~~~~~--~-~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 689 ----------------GKLVH------TYDEHSEQVNCCHFT--N-KSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp ----------------CCEEE------EEECCSSCEEEEEEC--S-SSSCCEEEEEETTSCEEEEETTS
T ss_pred ----------------CceEE------EEcCCCCcEEEEEEe--c-CCCceEEEEEeCCCeEEEEECCC
Confidence 12222 233444445556776 2 22356777888899999999864
No 73
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.11 E-value=3.6e-10 Score=101.73 Aligned_cols=115 Identities=15% Similarity=0.120 Sum_probs=83.7
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEeeeccCCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICTLFTDKNG 107 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt~~~~~~~ 107 (244)
..+.|++++++|. ||+|+.||.|++||..+. ... .+.++..+|.+|+++|++.++|+++ +.+|+|||..-. +.
T Consensus 210 ~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~-~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~--~~ 285 (435)
T 4e54_B 210 IWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELW-NLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV--RG 285 (435)
T ss_dssp CCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCC-CSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC--CS
T ss_pred ccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeE-EEecccceEEeeeecCCCceEEEEecCcceeeEEecccc--cc
Confidence 3478999999997 999999999999998654 344 4688999999999999999777654 588999997421 10
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. ..+. ...++....+...|+ + .+..+++++.+..+.+||+..
T Consensus 286 ---------------~-~~~~------~~~~h~~~v~~~~~s--p---dg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 286 ---------------K-ASFL------YSLPHRHPVNAACFS--P---DGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp ---------------S-SCCS------BCCBCSSCEEECCBC--T---TSSEEEEEESSSCEEEEESSS
T ss_pred ---------------c-ceEE------EeeeccccccceeEC--C---CCCeeEEEcCCCEEEEEECCC
Confidence 0 0111 122333334455676 2 257899999999999999864
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.10 E-value=5.4e-10 Score=96.02 Aligned_cols=133 Identities=14% Similarity=0.100 Sum_probs=88.0
Q ss_pred CCCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 29 RGTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
.....++++++++|.+++|+.||.|++||..+.+... .+.++..+|.+++++|||++|++.+ +..|++||..-.....
T Consensus 288 ~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~ 366 (425)
T 1r5m_A 288 HSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLA-LSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKS 366 (425)
T ss_dssp CSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEE-EEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--
T ss_pred CCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeE-ecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccce
Confidence 3456899999999999999999999999998776444 4677899999999999999999777 4789999975321000
Q ss_pred CcccccccccCCCCC-cceeeeeCccchhhcCCcc--ceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 108 TTKTGFNGRMGNKIA-APRLLKLTPLDSHLAGVNN--KFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp-~pr~L~L~Pe~~~~~G~~~--~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
..-+...-+.-.| .++.+. .+.++.. ..+...|+ + .+..+++++.+..+.+||++
T Consensus 367 --~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~~~~~s--~---~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 367 --RSLYGNRDGILNPLPIPLYA------SYQSSQDNDYIFDLSWN--C---AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp --------------CEECCEEE------EECCTTCCCCEEEEEEC--T---TSSEEEEEESSSCCEEEECC
T ss_pred --eeeecccccccCcccchhhh------hhcCcccCCceEEEEcc--C---CCceEEEEecCceEEEEeec
Confidence 0000000000000 011222 2333322 34455665 2 25688899999999999985
No 75
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.09 E-value=9e-10 Score=95.52 Aligned_cols=128 Identities=12% Similarity=0.194 Sum_probs=87.5
Q ss_pred cCCCCceeEEEecCCCc-EEEeCCCCcEEEEeccc---cccceecCCCCCCCeeEEEeCCC-CCEEEEeC-CcceEEEEe
Q 044877 27 FSRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNS---MRQAKTAFPGLGSPIRYVDVTYD-GRWILGTT-DTYLILICT 100 (244)
Q Consensus 27 Y~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~---~r~aKt~lpglGdPI~~vdvS~D-G~~lLaT~-~~~L~L~dt 100 (244)
+.....++|++++++|. ||+|+.||.|++||... .......+.++..+|.+|+++|| +++|++.+ +..|++||.
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 34556799999999997 99999999999999976 12233357889999999999999 88887776 478999997
Q ss_pred eeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 101 LFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 101 ~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.-. ... ...| .+..+. .+.++.-..+...|+ + +....+++++.+..+.+||++.
T Consensus 144 ~~~--~~~-~~~~---------~~~~~~------~~~~~~~~v~~~~~~--~--~~~~~l~~~~~dg~v~iwd~~~ 197 (416)
T 2pm9_A 144 NKC--TES-PSNY---------TPLTPG------QSMSSVDEVISLAWN--Q--SLAHVFASAGSSNFASIWDLKA 197 (416)
T ss_dssp TTT--SSC-TTTC---------CCBCCC------CSCCSSCCCCEEEEC--S--SCTTEEEEESSSSCEEEEETTT
T ss_pred CCC--ccc-cccc---------cccccc------cccCCCCCeeEEEeC--C--CCCcEEEEEcCCCCEEEEECCC
Confidence 421 000 0000 111111 122333333445665 3 1256788889999999999875
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.08 E-value=1.9e-09 Score=92.58 Aligned_cols=115 Identities=13% Similarity=0.148 Sum_probs=85.6
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
...+++++++++|. |++|+.||.|++||..+.+... .+.++..+|.+++++||| ++++.+ +..|++||..-
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~----- 319 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN-CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ----- 319 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE-EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-----
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce-EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-----
Confidence 45689999999986 9999999999999998776555 467899999999999999 665555 68899999631
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhhh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQVK 178 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV~ 178 (244)
.+.+. .+.++....+...|+ + .+..+++++.+..+.+||++.-.
T Consensus 320 ----------------~~~~~------~~~~~~~~i~~~~~s--~---~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 320 ----------------NTLLA------LSIVDGVPIFAGRIS--Q---DGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp ----------------TEEEE------EEECTTCCEEEEEEC--T---TSSEEEEEETTSCEEEEECHHHH
T ss_pred ----------------CcEeE------ecccCCccEEEEEEc--C---CCCEEEEEECCCeEEEEECCCCc
Confidence 11222 122223333444565 2 25788888999999999998765
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.08 E-value=1.2e-09 Score=96.30 Aligned_cols=72 Identities=17% Similarity=0.074 Sum_probs=61.6
Q ss_pred CCceeEEEecCCC-c-EEEeCCCCcEEEEeccccccceecC-CCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGDG-S-IVVGSLDGKIRLYSSNSMRQAKTAF-PGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G-~-IavGS~dG~IRLyD~~~~r~aKt~l-pglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
....++++++++| . +++|+.||.|++||..+++...++. .++.++|.+|+++|||++|++++ +..|++||..
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 4568999999998 3 9999999999999998876555432 78999999999999999999887 4779999963
No 78
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.08 E-value=2.2e-09 Score=90.47 Aligned_cols=115 Identities=10% Similarity=0.095 Sum_probs=84.8
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-c--------------
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-T-------------- 93 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~-------------- 93 (244)
...+++++++++|. |++|+.||.|++||..+.+...+ ++ ...+|..+.++|||+++++++. .
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~-~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 295 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKK-YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKF 295 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EE-CSSCEEEEEECSSSSEEEEEECCC-------------C
T ss_pred CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeee-ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcc
Confidence 45689999999997 99999999999999987765553 44 7889999999999999998774 4
Q ss_pred ceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEe
Q 044877 94 YLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWN 173 (244)
Q Consensus 94 ~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn 173 (244)
.|++||.. ....+. .+.++....+...|+ + .++.+++++.+..+.+|+
T Consensus 296 ~i~~~d~~---------------------~~~~~~------~~~~~~~~v~~~~~s--~---~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 296 EARFYHKI---------------------FEEEIG------RVQGHFGPLNTVAIS--P---QGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EEEEEETT---------------------TCCEEE------EEECCSSCEEEEEEC--T---TSSEEEEEETTSEEEEEE
T ss_pred eeEEEecC---------------------CCcchh------heecccCcEEEEEEC--C---CCCEEEEEcCCCeEEEEE
Confidence 46666642 111222 233444444555665 3 257888899999999999
Q ss_pred chhhh
Q 044877 174 FQQVK 178 (244)
Q Consensus 174 ~~kV~ 178 (244)
+++=.
T Consensus 344 ~~~~~ 348 (369)
T 3zwl_B 344 FEKSY 348 (369)
T ss_dssp ECHHH
T ss_pred Ccccc
Confidence 98743
No 79
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.08 E-value=4.1e-09 Score=95.00 Aligned_cols=71 Identities=10% Similarity=-0.012 Sum_probs=62.4
Q ss_pred CCceeEEEecCC---Cc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGD---GS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~---G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
....+|++++|+ |. |++|+.||.||+||..+.+...+.+.++..+|.+++++ ||++|++.+ +.+|+|||..
T Consensus 195 ~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 195 VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence 356899999999 85 99999999999999987776776678899999999999 999999777 5789999973
No 80
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.07 E-value=1e-09 Score=104.75 Aligned_cols=114 Identities=20% Similarity=0.221 Sum_probs=85.7
Q ss_pred CCceeEEEecCCC-c-EEEeCCCCcEEEEecccccc----ceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 30 GTNFQCFASTGDG-S-IVVGSLDGKIRLYSSNSMRQ----AKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 30 ~~~Ft~vats~~G-~-IavGS~dG~IRLyD~~~~r~----aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
....+|+++++++ . ||+||.||.||+||...... ....+.+|..+|.+|+++|||++|++.+ +..|+|||..-
T Consensus 382 ~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 382 TDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 4558999999865 3 99999999999999854321 2234678999999999999999999877 57899999631
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
.+.++ .+.||.-..+...|+ + .+..++++|.+..+.+||+.
T Consensus 462 ---------------------~~~~~------~~~~h~~~v~~~~~s--~---~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 462 ---------------------GVSTR------RFVGHTKDVLSVAFS--L---DNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp ---------------------TEEEE------EEECCSSCEEEEEEC--T---TSSCEEEEETTSCEEEECTT
T ss_pred ---------------------Cccee------EEeCCCCCEEEEEEe--C---CCCEEEEEeCCCEEEEEECC
Confidence 12222 344555555566776 2 25789999999999999964
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.07 E-value=2e-09 Score=91.32 Aligned_cols=121 Identities=13% Similarity=0.160 Sum_probs=85.3
Q ss_pred CCCceeEEEecC-------------CCc-EEEeCCCCcEEEEecccccc---ceecCCCCCCCeeEEEeCCC---CCEEE
Q 044877 29 RGTNFQCFASTG-------------DGS-IVVGSLDGKIRLYSSNSMRQ---AKTAFPGLGSPIRYVDVTYD---GRWIL 88 (244)
Q Consensus 29 ~~~~Ft~vats~-------------~G~-IavGS~dG~IRLyD~~~~r~---aKt~lpglGdPI~~vdvS~D---G~~lL 88 (244)
....+++++++| +|. |++|+.||.||+||..+.+. ....+.++..+|.+++++|| |++|+
T Consensus 146 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 225 (379)
T 3jrp_A 146 HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 225 (379)
T ss_dssp CTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred CCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEE
Confidence 345689999999 466 99999999999999875432 22356789999999999999 89998
Q ss_pred EeC-CcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCC
Q 044877 89 GTT-DTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGK 167 (244)
Q Consensus 89 aT~-~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~ 167 (244)
+.+ +..|+|||..-. . .+....+. ...++....+...|+ + .++.+++++.+.
T Consensus 226 s~~~dg~i~iwd~~~~--~----------------~~~~~~~~----~~~~~~~~v~~~~~s--~---~g~~l~~~~~dg 278 (379)
T 3jrp_A 226 SVSQDRTCIIWTQDNE--Q----------------GPWKKTLL----KEEKFPDVLWRASWS--L---SGNVLALSGGDN 278 (379)
T ss_dssp EEETTSCEEEEEESST--T----------------SCCEEEES----SSSCCSSCEEEEEEC--S---SSCCEEEEESSS
T ss_pred EEeCCCEEEEEeCCCC--C----------------ccceeeee----ccccCCCcEEEEEEc--C---CCCEEEEecCCC
Confidence 777 577999997421 0 11111111 112233334455665 2 257888899999
Q ss_pred eEEEEechh
Q 044877 168 FSVIWNFQQ 176 (244)
Q Consensus 168 fvvvWn~~k 176 (244)
.+.+|++..
T Consensus 279 ~i~iw~~~~ 287 (379)
T 3jrp_A 279 KVTLWKENL 287 (379)
T ss_dssp SEEEEEEEE
T ss_pred cEEEEeCCC
Confidence 999999973
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.07 E-value=9.7e-10 Score=95.29 Aligned_cols=118 Identities=12% Similarity=0.139 Sum_probs=86.8
Q ss_pred CCceeEEEecCCC-c-EEEeCCCC---cEEEEeccccccceecCC-CCCCCeeEEEeCC-CCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGDG-S-IVVGSLDG---KIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTY-DGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G-~-IavGS~dG---~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~-DG~~lLaT~-~~~L~L~dt~ 101 (244)
...+++++++|+| . +++|+.|| .|++||..+.+.....+. ++..+|.+++++| ||++|++.+ +..|+|||..
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 5679999999997 3 99999999 999999987543434566 8999999999999 999998777 5789999963
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhhh
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQVK 178 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV~ 178 (244)
- .+.+. .+.++....+...|+ + +....+++++.+..+.+||+....
T Consensus 294 ~---------------------~~~~~------~~~~~~~~v~~~~~s--~--~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 294 S---------------------AEQLS------QFPARGNWCFKTKFA--P--EAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp S---------------------CCEEE------EEECSSSCCCCEEEC--T--TCTTEEEECCSSSEEEEEESCCCC
T ss_pred C---------------------Cccce------eecCCCCceEEEEEC--C--CCCCEEEEEecCCcEEEEEccCCC
Confidence 1 11222 122333333344565 3 213688888899999999998654
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.5e-09 Score=96.11 Aligned_cols=131 Identities=10% Similarity=0.082 Sum_probs=84.3
Q ss_pred CceeEEEecC-CCc-EEEeCCCCcEEEEeccc---cccceecCC-CCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeec
Q 044877 31 TNFQCFASTG-DGS-IVVGSLDGKIRLYSSNS---MRQAKTAFP-GLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFT 103 (244)
Q Consensus 31 ~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~---~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~ 103 (244)
..++|+++++ +|. ||+||.||.||+||..+ ....+..+. ++..+|++|+++|||++|++.+ +..|+|||....
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~ 143 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHY 143 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccc
Confidence 5699999999 886 99999999999999865 211111112 5899999999999999999777 578999998531
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. .++ ..+.+.. ..-+.+.+.|.. +........|.+. ..+..+++++.+..+.+||++.
T Consensus 144 ~-~~~----~~~~~~~--~~i~~~~~~~~~-----~~~~~~~~~~~~~---~~~~~l~~~~~d~~i~iwd~~~ 201 (437)
T 3gre_A 144 Q-QES----EVKFLNC--ECIRKINLKNFG-----KNEYAVRMRAFVN---EEKSLLVALTNLSRVIIFDIRT 201 (437)
T ss_dssp E-ETT----EEEEEEE--EEEEEEEGGGGS-----SCCCEEEEEEEEC---SSCEEEEEEETTSEEEEEETTT
T ss_pred c-CCc----eeecccc--ceeEEEEccCcc-----cccCceEEEEEEc---CCCCEEEEEeCCCeEEEEeCCC
Confidence 0 010 0000000 012233333321 1222233343332 2367899999999999999865
No 84
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.06 E-value=1.4e-09 Score=97.95 Aligned_cols=134 Identities=16% Similarity=0.227 Sum_probs=88.4
Q ss_pred CCCceeEEEecCCCc--EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEeeecc
Q 044877 29 RGTNFQCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICTLFTD 104 (244)
Q Consensus 29 ~~~~Ft~vats~~G~--IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt~~~~ 104 (244)
.....+|++++++|. +|+|+.||.|++||.+..+.....+.++..+|++|.++|||+++|+++ ++.|+|||..-..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 345689999999885 889999999999999864433335678999999999999998655554 5789999975311
Q ss_pred CCCCccccccccc-CCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcc-eEEEEeeCCeEEEEechhhhcCC
Q 044877 105 KNGTTKTGFNGRM-GNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQE-RHLVATVGKFSVIWNFQQVKNGS 181 (244)
Q Consensus 105 ~~~~~~~GF~~~~-~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E-~~IvtStG~fvvvWn~~kV~~g~ 181 (244)
. .... ......|.++. .+.|+....+ .|.|.+ .+. .+++++.++.+.+|++.+-+-+.
T Consensus 356 ---~-----~~~~~~~~~~~~~~~~------~~~~h~~~v~--~~~~~p---~~~~~l~s~s~dg~i~iw~~~~~~~~~ 415 (430)
T 2xyi_A 356 ---E-----EQSTEDAEDGPPELLF------IHGGHTAKIS--DFSWNP---NEPWIICSVSEDNIMQVWQMAENVYND 415 (430)
T ss_dssp ---C-----CCCHHHHHHCCTTEEE------ECCCCSSCEE--EEEECS---SSTTEEEEEETTSEEEEEEECHHHHCC
T ss_pred ---c-----ccCccccccCCcceEE------EcCCCCCCce--EEEECC---CCCCEEEEEECCCCEEEeEcccccccC
Confidence 0 0000 00111233444 2233333223 344433 134 78888999999999997655443
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.06 E-value=1.1e-09 Score=90.70 Aligned_cols=111 Identities=16% Similarity=0.149 Sum_probs=80.5
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~ 107 (244)
...++|+++ ++|. +|+|+.||.|++||..+.+... .+.++..+|.+++++|||++|++.+. ..|++|+..-..
T Consensus 18 ~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~--- 92 (313)
T 3odt_A 18 DQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGT-VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATS--- 92 (313)
T ss_dssp SSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEE-EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCT---
T ss_pred CCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEE-EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecC---
Confidence 456899999 6654 9999999999999997765444 56778999999999999999998774 779999964210
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEe
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWN 173 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn 173 (244)
.++.+. .+.++....+...|+ +..+++++.+..+.+||
T Consensus 93 ---------------~~~~~~------~~~~~~~~i~~~~~~-------~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 93 ---------------GEDPLY------TLIGHQGNVCSLSFQ-------DGVVISGSWDKTAKVWK 130 (313)
T ss_dssp ---------------TSCC-C------EECCCSSCEEEEEEE-------TTEEEEEETTSEEEEEE
T ss_pred ---------------CCCccc------chhhcccCEEEEEec-------CCEEEEEeCCCCEEEEc
Confidence 111111 122333333333443 46899999999999999
No 86
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.05 E-value=2.2e-09 Score=93.28 Aligned_cols=117 Identities=8% Similarity=0.030 Sum_probs=84.2
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCC-EEEEeC-CcceEEEEeeeccCCC
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGR-WILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~-~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
..+++++++++|. ||+|+.||.|++||.. .+... .+.++..+|.+|+++|||+ +|++.+ +.+|++||..-. +
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~-~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--~- 238 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIF-KEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNI--K- 238 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEE-EEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGC--C-
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEE-EeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCC--C-
Confidence 5589999999988 9999999999999984 33444 4678999999999999999 555444 578999997521 0
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
+....+. ..++.-..+...|+ +. .+..+++++.+..+.+||++.-
T Consensus 239 --------------~~~~~~~-------~~~~~~~v~~~~~s--~~--~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 239 --------------DKNSYIA-------EMPHEKPVNAAYFN--PT--DSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp --------------STTCEEE-------EEECSSCEEEEEEC--TT--TSCEEEEEESSSEEEEEETTBT
T ss_pred --------------cccceEE-------EecCCCceEEEEEc--CC--CCCEEEEEcCCCcEEEEECCCC
Confidence 1112222 11233344555666 21 2578889999999999998753
No 87
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.04 E-value=5.4e-10 Score=106.64 Aligned_cols=116 Identities=9% Similarity=-0.025 Sum_probs=81.6
Q ss_pred CceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEE--EeCCCC-CEEEEeC-CcceEEEEeeeccCC
Q 044877 31 TNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYV--DVTYDG-RWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~v--dvS~DG-~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
..++|+++++++.||+||.||.|||||..+.+.....++++..+|.+| .+++|| ++|++++ +.+|+|||.+-.
T Consensus 267 ~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~--- 343 (524)
T 2j04_B 267 SLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI--- 343 (524)
T ss_dssp TCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---
T ss_pred CCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---
Confidence 568999999988899999999999999976544444578999999999 578998 6666555 688999997410
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+ .++.+. .| ..+. +-....|+ + . ...+++++.+..+.+||++.
T Consensus 344 ---~------------~~~~~~---~~--~~~~--~v~~v~fs--p-~--~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 344 ---A------------TTKTTV---SR--FRGS--NLVPVVYC--P-Q--IYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp ---H------------HHCEEE---EE--CSCC--SCCCEEEE--T-T--TTEEEEECSSSEEEEEETTC
T ss_pred ---C------------cccccc---cc--cccC--cccceEeC--C-C--cCeEEEeCCCCcEEEEECcc
Confidence 0 011111 11 1111 12344666 3 1 45688888899999999875
No 88
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.04 E-value=3.5e-09 Score=90.55 Aligned_cols=122 Identities=11% Similarity=0.102 Sum_probs=84.6
Q ss_pred CCceeEEEecCC--Cc-EEEeCCCCcEEEEecccccc-ceecCCCCCCCeeEEEeCCC-------------CCEEEEeC-
Q 044877 30 GTNFQCFASTGD--GS-IVVGSLDGKIRLYSSNSMRQ-AKTAFPGLGSPIRYVDVTYD-------------GRWILGTT- 91 (244)
Q Consensus 30 ~~~Ft~vats~~--G~-IavGS~dG~IRLyD~~~~r~-aKt~lpglGdPI~~vdvS~D-------------G~~lLaT~- 91 (244)
...+.+++++|+ |. ||+||.||.||+||...... ....+.++..+|.+++++|+ +++|++.+
T Consensus 99 ~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~ 178 (297)
T 2pm7_B 99 SASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (297)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET
T ss_pred CCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC
Confidence 345899999996 65 99999999999999865421 13346789999999999997 56777665
Q ss_pred CcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEE
Q 044877 92 DTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVI 171 (244)
Q Consensus 92 ~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvv 171 (244)
+.+|+|||..-. . +....+. .+.||...-....|+ +.......++++|.+..+.+
T Consensus 179 D~~v~lwd~~~~--~---------------~~~~~~~------~l~~H~~~V~~v~~s--p~~~~~~~las~s~D~~v~i 233 (297)
T 2pm7_B 179 DNLVKIWKYNSD--A---------------QTYVLES------TLEGHSDWVRDVAWS--PTVLLRSYMASVSQDRTCII 233 (297)
T ss_dssp TSCEEEEEEETT--T---------------TEEEEEE------EECCCSSCEEEEEEC--CCCSSSEEEEEEETTSCEEE
T ss_pred CCcEEEEEEcCC--C---------------ceEEEEE------EecCCCCceEEEEEC--CCCCCceEEEEEECCCcEEE
Confidence 688999997420 0 0111222 244555444555676 21111367888899999999
Q ss_pred Eechh
Q 044877 172 WNFQQ 176 (244)
Q Consensus 172 Wn~~k 176 (244)
||++.
T Consensus 234 Wd~~~ 238 (297)
T 2pm7_B 234 WTQDN 238 (297)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 99865
No 89
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.04 E-value=2.7e-09 Score=94.15 Aligned_cols=111 Identities=14% Similarity=0.094 Sum_probs=78.8
Q ss_pred eeEEEecCCCcEEE--eCCCCcEEEEeccccc----------------cceecCCCCCCCeeEEEeCCCCCEEEEeC-Cc
Q 044877 33 FQCFASTGDGSIVV--GSLDGKIRLYSSNSMR----------------QAKTAFPGLGSPIRYVDVTYDGRWILGTT-DT 93 (244)
Q Consensus 33 Ft~vats~~G~Iav--GS~dG~IRLyD~~~~r----------------~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~ 93 (244)
...+++++ ..+|+ |+.||.|++||..+.+ +.+ .+.+|.++|++|+++|||++|++.+ +.
T Consensus 140 ~~~~~~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~-~~~~h~~~v~~~~~s~~g~~l~s~s~d~ 217 (355)
T 3vu4_A 140 GGVCEFSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGV-LIKAHTNPIKMVRLNRKSDMVATCSQDG 217 (355)
T ss_dssp EEEEEEET-TEEEEEESSCTTCEEEEECCC------------------CCE-EECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CceEEEEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccE-EEEccCCceEEEEECCCCCEEEEEeCCC
Confidence 34455555 45555 7999999999997643 133 4789999999999999999998777 57
Q ss_pred c-eEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhc-C-CccceeeeeeeeecCCCCcceEEEEeeCCeEE
Q 044877 94 Y-LILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLA-G-VNNKFHKAQFSWVTENGKQERHLVATVGKFSV 170 (244)
Q Consensus 94 ~-L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~-G-~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvv 170 (244)
+ |+|||..- .+.+. .+. | +....+...|+ + .+..++++|.+..+.
T Consensus 218 ~~v~iwd~~~---------------------~~~~~------~~~~g~h~~~v~~~~~s--~---~~~~l~s~s~d~~v~ 265 (355)
T 3vu4_A 218 TIIRVFKTED---------------------GVLVR------EFRRGLDRADVVDMKWS--T---DGSKLAVVSDKWTLH 265 (355)
T ss_dssp SEEEEEETTT---------------------CCEEE------EEECTTCCSCEEEEEEC--T---TSCEEEEEETTCEEE
T ss_pred CEEEEEECCC---------------------CcEEE------EEEcCCCCCcEEEEEEC--C---CCCEEEEEECCCEEE
Confidence 7 99999731 11222 222 3 44445566776 2 257888999999999
Q ss_pred EEechhh
Q 044877 171 IWNFQQV 177 (244)
Q Consensus 171 vWn~~kV 177 (244)
+||++.-
T Consensus 266 iw~~~~~ 272 (355)
T 3vu4_A 266 VFEIFND 272 (355)
T ss_dssp EEESSCC
T ss_pred EEEccCC
Confidence 9999764
No 90
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.04 E-value=3.1e-09 Score=91.11 Aligned_cols=117 Identities=15% Similarity=0.114 Sum_probs=80.8
Q ss_pred CCceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceecC------------CCCCCCeeEEEeCC-CCCEEEEeC-Cc
Q 044877 30 GTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTAF------------PGLGSPIRYVDVTY-DGRWILGTT-DT 93 (244)
Q Consensus 30 ~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~l------------pglGdPI~~vdvS~-DG~~lLaT~-~~ 93 (244)
...++|++++| +|. ||+|+.||.|++||..+.+...+.. .++..+|.+|+++| ++++|++.+ +.
T Consensus 43 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 43 GGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTS
T ss_pred CCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCC
Confidence 45799999999 887 9999999999999997654333221 36899999999999 777777666 57
Q ss_pred ceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEe
Q 044877 94 YLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWN 173 (244)
Q Consensus 94 ~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn 173 (244)
.|++||..- .+.++. +. .........|.. .......+++++.+..+.+||
T Consensus 123 ~i~iwd~~~---------------------~~~~~~------~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 123 TLKVWDTNT---------------------LQTADV------FN-FEETVYSHHMSP--VSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp EEEEEETTT---------------------TEEEEE------EE-CSSCEEEEEECS--SCSSCCEEEEEESSSSEEEEE
T ss_pred eEEEeeCCC---------------------Ccccee------cc-CCCceeeeEeec--CCCCCcEEEEEcCCCeEEEEe
Confidence 899999631 011110 00 111122334442 122356888899999999999
Q ss_pred chh
Q 044877 174 FQQ 176 (244)
Q Consensus 174 ~~k 176 (244)
++.
T Consensus 173 ~~~ 175 (408)
T 4a11_B 173 LKS 175 (408)
T ss_dssp SSS
T ss_pred CCC
Confidence 863
No 91
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.04 E-value=1.4e-09 Score=103.33 Aligned_cols=117 Identities=18% Similarity=0.186 Sum_probs=89.9
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCC
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTLFTDKN 106 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~ 106 (244)
...+.++++++|+|. ||+|+.||.|++||..+++... .+.++.++|++++++|||++|++.+. ..|++||..-
T Consensus 54 ~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~---- 128 (814)
T 3mkq_A 54 TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV-DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN---- 128 (814)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGG----
T ss_pred CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCC----
Confidence 455699999999997 9999999999999998776555 46889999999999999999987774 7899999631
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.....+ .+.++....+...|+ + ..+..+++++.+..+.+||+..
T Consensus 129 ----------------~~~~~~------~~~~~~~~v~~~~~~--p--~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 129 ----------------NWALEQ------TFEGHEHFVMCVAFN--P--KDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp ----------------TSEEEE------EEECCSSCEEEEEEE--T--TEEEEEEEEETTSEEEEEETTC
T ss_pred ----------------CceEEE------EEcCCCCcEEEEEEE--c--CCCCEEEEEeCCCeEEEEECCC
Confidence 001122 233445555666776 2 1257888889999999999853
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.04 E-value=3.2e-09 Score=94.85 Aligned_cols=108 Identities=13% Similarity=0.123 Sum_probs=77.8
Q ss_pred eEEEecCCCcEEEeCCCCcEEEEecccccccee-cCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCCccc
Q 044877 34 QCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKT-AFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGTTKT 111 (244)
Q Consensus 34 t~vats~~G~IavGS~dG~IRLyD~~~~r~aKt-~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~~~ 111 (244)
++++.++++.||+|. |+.|||||..+++..++ .+.+++++|++|+++|||++|++.+ +..|+|||..
T Consensus 109 ~~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~---------- 177 (420)
T 4gga_A 109 NLVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQ---------- 177 (420)
T ss_dssp BCEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETT----------
T ss_pred eeEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcC----------
Confidence 568888876688875 99999999988765553 2467889999999999999999776 5789999963
Q ss_pred ccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 112 GFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 112 GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
..++++ .+.|+..... .+.|. ...+++++.+..+.+||...
T Consensus 178 -----------~~~~~~------~~~~h~~~v~--~~s~~-----~~~l~sgs~d~~i~~~d~~~ 218 (420)
T 4gga_A 178 -----------QQKRLR------NMTSHSARVG--SLSWN-----SYILSSGSRSGHIHHHDVRV 218 (420)
T ss_dssp -----------TTEEEE------EECCCSSCEE--EEEEE-----TTEEEEEETTSEEEEEETTS
T ss_pred -----------CCcEEE------EEeCCCCceE--EEeeC-----CCEEEEEeCCCceeEeeecc
Confidence 112333 2334433222 34432 36788888889999998764
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.04 E-value=1.3e-09 Score=97.45 Aligned_cols=137 Identities=12% Similarity=0.042 Sum_probs=82.3
Q ss_pred CCceeEEEecC--------CCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-C-CcceEEE
Q 044877 30 GTNFQCFASTG--------DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-T-DTYLILI 98 (244)
Q Consensus 30 ~~~Ft~vats~--------~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~-~~~L~L~ 98 (244)
...+.+|+++| +|+ ||+||.|+.|||||..+.....+ +.++..+|.+|+++|++..+|++ + +.+|+||
T Consensus 136 ~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~w 214 (393)
T 4gq1_A 136 HNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA-GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIF 214 (393)
T ss_dssp SSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE-EEECSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred CCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee-ecCCCCCcEEEEECCCCCceEEecCCCCEEEEE
Confidence 34589999987 777 99999999999999876554543 44688999999999999755544 3 5789999
Q ss_pred EeeeccCCCCcccccccccCCCCCcceeeeeCccch----hhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEec
Q 044877 99 CTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDS----HLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNF 174 (244)
Q Consensus 99 dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~----~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~ 174 (244)
|..-.... .-..... .......+.+.+... ...|+.-......|. .. .++.++.++.++.+.+||+
T Consensus 215 d~~t~~~~----~~~~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~--~~--dg~~l~s~s~d~~i~vwd~ 284 (393)
T 4gq1_A 215 DWTLNLSA----EENSQTE--LVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI--GS--DGSGILAMCKSGAWLRWNL 284 (393)
T ss_dssp ETTCCC----------------CSCCCSEEEESGGGC------CCSSSCSEEEEE--TT--TTCEEEEECTTSEEEEEEC
T ss_pred ECCCCccc----ccccccC--CcccceEEecccccceeeeecccccccceeeeee--cC--CCCEEEEEeCCCCEEEEEC
Confidence 97532100 0011000 001111222222111 122333333344554 22 2678999999999999998
Q ss_pred hhh
Q 044877 175 QQV 177 (244)
Q Consensus 175 ~kV 177 (244)
..-
T Consensus 285 ~~~ 287 (393)
T 4gq1_A 285 FAN 287 (393)
T ss_dssp ---
T ss_pred ccC
Confidence 653
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.02 E-value=1.9e-09 Score=91.03 Aligned_cols=112 Identities=10% Similarity=0.044 Sum_probs=84.7
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccc---cceecCCCCCCCeeEEEeCCCCC-EEEEeC-CcceEEEEe-ee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMR---QAKTAFPGLGSPIRYVDVTYDGR-WILGTT-DTYLILICT-LF 102 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r---~aKt~lpglGdPI~~vdvS~DG~-~lLaT~-~~~L~L~dt-~~ 102 (244)
....+|++++++|. ||+|+.||.|++||..+.+ ..+ .+.++..+|.+++++|||+ +|++.+ +..|++||. .-
T Consensus 11 ~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~ 89 (342)
T 1yfq_A 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLL-QSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGS 89 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEE-EEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSS
T ss_pred CCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccce-eeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccC
Confidence 45689999999987 9999999999999987654 133 2447899999999999999 888776 578999996 31
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcC--CccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAG--VNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G--~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. ..+ .+.+ +....+...|+ + ...+++++.+..+.+||++.
T Consensus 90 ~-------------------~~~---------~~~~~~~~~~v~~l~~~--~----~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 90 P-------------------SFQ---------ALTNNEANLGICRICKY--G----DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp S-------------------SEE---------ECBSCCCCSCEEEEEEE--T----TTEEEEEETTSEEEEECHHH
T ss_pred C-------------------ceE---------eccccCCCCceEEEEeC--C----CCEEEEEcCCCeEEEEcccc
Confidence 0 011 1223 44444555666 2 57899999999999999986
No 95
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.01 E-value=3.6e-09 Score=91.96 Aligned_cols=116 Identities=10% Similarity=0.085 Sum_probs=83.6
Q ss_pred CCceeEEEecCCC-c-EEEeCCCCcEEEEeccccccceec-CCCCCCCeeEEEeCC-CCCEEEEeC-CcceEEEEeeecc
Q 044877 30 GTNFQCFASTGDG-S-IVVGSLDGKIRLYSSNSMRQAKTA-FPGLGSPIRYVDVTY-DGRWILGTT-DTYLILICTLFTD 104 (244)
Q Consensus 30 ~~~Ft~vats~~G-~-IavGS~dG~IRLyD~~~~r~aKt~-lpglGdPI~~vdvS~-DG~~lLaT~-~~~L~L~dt~~~~ 104 (244)
...++|++++++| . ||+|+.||.||+||..+.+..... +.++..+|.+|+++| |+++|++.+ +..|++||..
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~--- 149 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS--- 149 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT---
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC---
Confidence 4569999999998 4 999999999999999866544322 247999999999999 778888776 5789999963
Q ss_pred CCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 105 KNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 105 ~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
+ ...+.+. ...++....+...|+ + .+..+++++.+..+.+||++
T Consensus 150 --~--------------~~~~~~~------~~~~~~~~v~~~~~~--~---~~~~l~~~~~d~~i~i~d~~ 193 (383)
T 3ei3_B 150 --G--------------SVIQVFA------KTDSWDYWYCCVDVS--V---SRQMLATGDSTGRLLLLGLD 193 (383)
T ss_dssp --S--------------CEEEEEE------CCCCSSCCEEEEEEE--T---TTTEEEEEETTSEEEEEETT
T ss_pred --C--------------CceEEEe------ccCCCCCCeEEEEEC--C---CCCEEEEECCCCCEEEEECC
Confidence 0 0112222 111222334455666 2 25789999999999999983
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.99 E-value=5.6e-09 Score=93.10 Aligned_cols=131 Identities=18% Similarity=0.240 Sum_probs=86.4
Q ss_pred CCCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeC--CCCCEEEEeC-CcceEEEEeeeccC
Q 044877 29 RGTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVT--YDGRWILGTT-DTYLILICTLFTDK 105 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS--~DG~~lLaT~-~~~L~L~dt~~~~~ 105 (244)
-...++++++++++.+|+|+.||.|++||..+++... .+.++.++|.+++++ +|+++|++.+ +.+|++||..-..
T Consensus 161 h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~- 238 (464)
T 3v7d_B 161 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTH-VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES- 238 (464)
T ss_dssp CSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC-
T ss_pred CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEE-EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc-
Confidence 3456899999999999999999999999998876555 578899999999998 6889998777 5889999975311
Q ss_pred CCCcccccccccCCCCCcceeeeeCccch-----hhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 106 NGTTKTGFNGRMGNKIAAPRLLKLTPLDS-----HLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 106 ~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~-----~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.....+.. ...+. ....|+.. .+.|+..... .++. .+..+++++.+..+.+||++.
T Consensus 239 -~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~v~--~~~~-----~~~~l~~~~~d~~i~vwd~~~ 299 (464)
T 3v7d_B 239 -SVPDHGEE------HDYPL-VFHTPEENPYFVGVLRGHMASVR--TVSG-----HGNIVVSGSYDNTLIVWDVAQ 299 (464)
T ss_dssp -CC------------CCSSE-EESCGGGCTTEEEEECCCSSCEE--EEEE-----ETTEEEEEETTSCEEEEETTT
T ss_pred -cccccccc------CCcce-EeeccCCCeEEEEEccCccceEE--EEcC-----CCCEEEEEeCCCeEEEEECCC
Confidence 10000010 01111 11112111 2233332111 2221 257899999999999999864
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.97 E-value=2.6e-09 Score=90.11 Aligned_cols=118 Identities=10% Similarity=0.031 Sum_probs=80.0
Q ss_pred CCceeEEEecCCCc--EEEeCC---CCcEEEEeccccccceecCCCCCCCeeEEEeCCC---CCEEEEeC-CcceEEEEe
Q 044877 30 GTNFQCFASTGDGS--IVVGSL---DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYD---GRWILGTT-DTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~--IavGS~---dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~D---G~~lLaT~-~~~L~L~dt 100 (244)
...+++++++|+|. +++|+. ||.|++||..+.+.......++.++|.+++++|| |++|++.+ +..|++||.
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 97 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNL 97 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECT
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeC
Confidence 44689999999884 678887 9999999997765443333468899999999999 79888777 577999996
Q ss_pred eeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeee----eecCCCCcceEEEEeeCCeEEEEechh
Q 044877 101 LFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFS----WVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 101 ~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn----~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.- ++ ..++ .+.++....+...|. |.+ .++.+++++.+..+.+||++.
T Consensus 98 ~~----~~----------------~~~~------~~~~~~~~v~~~~~~~~~~~s~---~~~~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 98 EA----PE----------------MPVY------SVKGHKEIINAIDGIGGLGIGE---GAPEIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp TS----CS----------------SCSE------EECCCSSCEEEEEEESGGGCC----CCCEEEEEETTSCEEEECTTS
T ss_pred CC----CC----------------ccEE------EEEecccceEEEeeccccccCC---CccEEEEEeCCCeEEEEeCCC
Confidence 41 00 0111 122232222222221 112 257888899999999999875
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.97 E-value=8.5e-09 Score=91.91 Aligned_cols=112 Identities=12% Similarity=0.159 Sum_probs=81.9
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCCccc
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGTTKT 111 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~~~ 111 (244)
.+|++.+++ .||+||.||.||+||..+++..+ .++++..+|.++++++|+ +|++.+ +.+|++||..-
T Consensus 125 ~~~~~~~~~-~l~sgs~dg~i~vwd~~~~~~~~-~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~--------- 192 (464)
T 3v7d_B 125 ITCLQFEDN-YVITGADDKMIRVYDSINKKFLL-QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKK--------- 192 (464)
T ss_dssp EEEEEEETT-EEEEEETTSCEEEEETTTTEEEE-EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTT---------
T ss_pred EEEEEECCC-EEEEEcCCCcEEEEECCCCcEEE-EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCC---------
Confidence 578777653 79999999999999998876555 578999999999999999 555444 68899999631
Q ss_pred ccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 112 GFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 112 GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
.+.+. .+.++.-..+...|+.. ..+..+++++.+..+.+||+..-
T Consensus 193 ------------~~~~~------~~~~h~~~v~~l~~~~~---~~~~~l~s~s~d~~i~vwd~~~~ 237 (464)
T 3v7d_B 193 ------------GCCTH------VFEGHNSTVRCLDIVEY---KNIKYIVTGSRDNTLHVWKLPKE 237 (464)
T ss_dssp ------------TEEEE------EECCCSSCEEEEEEEES---SSCEEEEEEETTSCEEEEECCCC
T ss_pred ------------CcEEE------EECCCCCccEEEEEecC---CCCCEEEEEcCCCcEEEeeCCCC
Confidence 11222 23344444445566632 23578999999999999998753
No 99
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.95 E-value=1.3e-08 Score=87.96 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=85.1
Q ss_pred CCceeEEEecCC--Cc-EEEeCCCCcEEEEecccccc--ceecCCCCCCCeeEEEeCCC-----------------CCEE
Q 044877 30 GTNFQCFASTGD--GS-IVVGSLDGKIRLYSSNSMRQ--AKTAFPGLGSPIRYVDVTYD-----------------GRWI 87 (244)
Q Consensus 30 ~~~Ft~vats~~--G~-IavGS~dG~IRLyD~~~~r~--aKt~lpglGdPI~~vdvS~D-----------------G~~l 87 (244)
...+.+++++|+ |. ||+||.||.||+||...... .+..+.++..+|.+++++|+ +++|
T Consensus 103 ~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 182 (316)
T 3bg1_A 103 DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRF 182 (316)
T ss_dssp SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBE
T ss_pred CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceE
Confidence 345889999997 65 99999999999999875421 23457889999999999998 4677
Q ss_pred EEeC-CcceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeC
Q 044877 88 LGTT-DTYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVG 166 (244)
Q Consensus 88 LaT~-~~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG 166 (244)
++.+ +.+|+|||..- . ...+.++ .+.||...-....|+.. +......++++|.+
T Consensus 183 ~sgs~D~~v~lWd~~~---~---------------~~~~~~~------~l~~h~~~V~~v~~sp~-~~~~~~~las~s~D 237 (316)
T 3bg1_A 183 ASGGCDNLIKLWKEEE---D---------------GQWKEEQ------KLEAHSDWVRDVAWAPS-IGLPTSTIASCSQD 237 (316)
T ss_dssp ECCBTTSBCCEEEECT---T---------------SCEEEEE------CCBCCSSCEEEEECCCC-SSCSCCEEEEEETT
T ss_pred EEecCCCeEEEEEeCC---C---------------Cccceee------ecccCCCceEEEEecCC-CCCCCceEEEEcCC
Confidence 7665 58899999631 0 0112222 34455443445566621 10123678889999
Q ss_pred CeEEEEechhh
Q 044877 167 KFSVIWNFQQV 177 (244)
Q Consensus 167 ~fvvvWn~~kV 177 (244)
..+.+|+++.-
T Consensus 238 ~~v~iw~~~~~ 248 (316)
T 3bg1_A 238 GRVFIWTCDDA 248 (316)
T ss_dssp CEEEEEECSST
T ss_pred CeEEEEEccCc
Confidence 99999998764
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.95 E-value=1.1e-08 Score=92.94 Aligned_cols=120 Identities=8% Similarity=0.084 Sum_probs=85.2
Q ss_pred CCCceeEEEecCCCcEEEeCC-CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCC
Q 044877 29 RGTNFQCFASTGDGSIVVGSL-DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKN 106 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~-dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~ 106 (244)
.....++++++ ...+++|+. ||.|++||..+.+.....++++..+|+++++||||++|++.+ +..|++||..-
T Consensus 445 ~~~~~~~~~~~-~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~---- 519 (615)
T 1pgu_A 445 LNSPGSAVSLS-QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQS---- 519 (615)
T ss_dssp CSSCEEEEEEC-SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT----
T ss_pred cCCCceEEEEc-CCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCC----
Confidence 45668899999 335999999 999999999776432135788999999999999999999887 47799999731
Q ss_pred CCcccccccccCCCCCcceeeeeCccchhhcC-Cccceeeeeeeee-----cCCCCcceEEEEeeCCeEEEEechh
Q 044877 107 GTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAG-VNNKFHKAQFSWV-----TENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 107 ~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G-~~~~Ft~akFn~~-----tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+.+. .+.+ +....+...|+.. .+...+..+++++.+..+.+||++.
T Consensus 520 -----------------~~~~~------~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 572 (615)
T 1pgu_A 520 -----------------REVKT------SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKR 572 (615)
T ss_dssp -----------------TEEEE------CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSC
T ss_pred -----------------Cccee------EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCC
Confidence 11222 1222 3333445566520 0011367888899999999999964
No 101
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.95 E-value=1.9e-09 Score=96.39 Aligned_cols=109 Identities=14% Similarity=0.082 Sum_probs=75.4
Q ss_pred EecCCCc-EEEeCCCCcEEEEeccccccc----eecCCCCCCCeeEEEeCC--------CCCEEEEeC-CcceEEEEeee
Q 044877 37 ASTGDGS-IVVGSLDGKIRLYSSNSMRQA----KTAFPGLGSPIRYVDVTY--------DGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 37 ats~~G~-IavGS~dG~IRLyD~~~~r~a----Kt~lpglGdPI~~vdvS~--------DG~~lLaT~-~~~L~L~dt~~ 102 (244)
+.++++. ||+||.|+.|||||..++... ...+.||.++|.+|+++| ||++|++.+ +.+|+|||..-
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 3344555 999999999999998654321 224789999999999998 999998776 58899999742
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. . ..+. ..++.-.-....|+ + +....+++++.+..+.+||++.
T Consensus 176 ~-------------------~-~~~~-------~~~~~~~v~~v~~~--p--~~~~~l~~~~~d~~v~~wd~~t 218 (393)
T 4gq1_A 176 E-------------------G-PILA-------GYPLSSPGISVQFR--P--SNPNQLIVGERNGNIRIFDWTL 218 (393)
T ss_dssp T-------------------E-EEEE-------EEECSSCEEEEEEE--T--TEEEEEEEEETTSEEEEEETTC
T ss_pred C-------------------c-eeee-------ecCCCCCcEEEEEC--C--CCCceEEecCCCCEEEEEECCC
Confidence 0 0 1111 11222222345676 3 2245788999999999999864
No 102
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.95 E-value=5.1e-09 Score=102.28 Aligned_cols=119 Identities=14% Similarity=0.130 Sum_probs=87.9
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEecc--ccccceecCCCCCCCeeEEEeCCC--CCEEEEeC-CcceEEEEeeec
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSN--SMRQAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DTYLILICTLFT 103 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~--~~r~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~~L~L~dt~~~ 103 (244)
...++|++++++|. ||+|+.||.|++||.. +.+... .+.++.++|++|+++|+ |++|++.+ +..|++||..-
T Consensus 9 ~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~-~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~- 86 (753)
T 3jro_A 9 NELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN- 86 (753)
T ss_dssp CCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEE-EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET-
T ss_pred cceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccce-eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC-
Confidence 35689999999997 9999999999999986 333333 57889999999999998 99998776 57899999741
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
+ .+..+. .+.++....+...|+ +. +.+..+++++.+..+.+||++.-
T Consensus 87 ---~---------------~~~~~~------~~~~h~~~V~~v~~s--p~-~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 87 ---G---------------RWSQIA------VHAVHSASVNSVQWA--PH-EYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp ---T---------------EEEEEE------EECCCSSCEEEEEEC--CG-GGCSEEEEEETTSEEEEEECCSS
T ss_pred ---C---------------cccccc------cccCCCCCeEEEEEC--CC-CCCCEEEEEeCCCcEEEEEeecC
Confidence 0 111222 233444445556676 21 11578999999999999998753
No 103
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.95 E-value=7e-09 Score=93.48 Aligned_cols=114 Identities=13% Similarity=0.136 Sum_probs=84.7
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccce---ecCCCCCCCeeEEEeCCC---CCEEEEeCC-cceEEEEeee
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAK---TAFPGLGSPIRYVDVTYD---GRWILGTTD-TYLILICTLF 102 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aK---t~lpglGdPI~~vdvS~D---G~~lLaT~~-~~L~L~dt~~ 102 (244)
...++++++|+|. |++|+.+|.|++||....+..+ ..+.++..+|.+|+++|| |++|++++. ..|++||..-
T Consensus 150 ~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 150 KRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred CCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 5578999999997 9999999999999987654321 246788999999999999 999998875 7799999631
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...+. ..+.|+.-..+...|+ + +..+++++.+..|.+||++.
T Consensus 230 ---------------------~~~~~-----~~~~~h~~~v~~~~~s----d--~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 230 ---------------------CFIVD-----KWLFGHKHFVSSICCG----K--DYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp ---------------------TTCEE-----EECCCCSSCEEEEEEC----S--TTEEEEEESSSEEEEEETTT
T ss_pred ---------------------Cceee-----eeecCCCCceEEEEEC----C--CCEEEEEeCCCeEEEEECCC
Confidence 01111 0122444334455665 1 57899999999999999864
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.95 E-value=4.1e-09 Score=104.03 Aligned_cols=120 Identities=9% Similarity=0.009 Sum_probs=83.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCC-----CeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGS-----PIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGd-----PI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
.....+++.||+|+ ||++|.||.|++||..+ +..+ +. +.. .|.+|++||||++|++++ +.+|+|||..-
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~-l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTN-LD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEE-CC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeee-cc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 45599999999999 99999999999999744 3442 45 444 499999999999999888 58899999741
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
++ . ..|+-+.++.-+.+..||......-.|+ + + + .++++.|+.|.+||+..
T Consensus 161 --~~------l--------~~~~~i~l~ti~~~~~gh~~~V~sVawS--P--d-g--Laass~D~tVrlWd~~~ 211 (588)
T 2j04_A 161 --NS------E--------NTPEFYFESSIRLSDAGSKDWVTHIVWY--E--D-V--LVAALSNNSVFSMTVSA 211 (588)
T ss_dssp --CT------T--------TCCCCEEEEEEECSCTTCCCCEEEEEEE--T--T-E--EEEEETTCCEEEECCCS
T ss_pred --Cc------c--------ccccceeeeeeecccccccccEEEEEEc--C--C-c--EEEEeCCCeEEEEECCC
Confidence 00 0 0122111111111234454455556666 3 2 3 88999999999999854
No 105
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.92 E-value=6.2e-09 Score=96.01 Aligned_cols=114 Identities=9% Similarity=0.005 Sum_probs=82.4
Q ss_pred CCceeEEEecCCCc-EE----EeCCCCcEEEEecccc-----ccc-----eecCCCCCCCeeEEEeCCC-CCEEEEeC-C
Q 044877 30 GTNFQCFASTGDGS-IV----VGSLDGKIRLYSSNSM-----RQA-----KTAFPGLGSPIRYVDVTYD-GRWILGTT-D 92 (244)
Q Consensus 30 ~~~Ft~vats~~G~-Ia----vGS~dG~IRLyD~~~~-----r~a-----Kt~lpglGdPI~~vdvS~D-G~~lLaT~-~ 92 (244)
...+++++++++|. || +|+.||.||+||..+. +.. ...+.+|+++|.+|+++|+ +.+|++.+ +
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 44699999999998 77 7999999999998654 111 2356788999999999998 77776555 6
Q ss_pred cceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEE
Q 044877 93 TYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIW 172 (244)
Q Consensus 93 ~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvW 172 (244)
.+|+|||..- + ..+. ...++....+...|+ + .+..+++++.+..+.+|
T Consensus 172 g~v~iwD~~~----~-----------------~~~~------~~~~~~~~v~~v~ws--p---dg~~lasgs~dg~v~iw 219 (434)
T 2oit_A 172 GSIAVLQVTE----T-----------------VKVC------ATLPSTVAVTSVCWS--P---KGKQLAVGKQNGTVVQY 219 (434)
T ss_dssp SCEEEEEESS----S-----------------EEEE------EEECGGGCEEEEEEC--T---TSSCEEEEETTSCEEEE
T ss_pred CeEEEEEcCC----C-----------------ccee------eccCCCCceeEEEEc--C---CCCEEEEEcCCCcEEEE
Confidence 8899999741 0 1111 112233344555665 3 26789999999999999
Q ss_pred ech
Q 044877 173 NFQ 175 (244)
Q Consensus 173 n~~ 175 (244)
|.+
T Consensus 220 d~~ 222 (434)
T 2oit_A 220 LPT 222 (434)
T ss_dssp CTT
T ss_pred ccC
Confidence 987
No 106
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.92 E-value=8.7e-09 Score=103.76 Aligned_cols=116 Identities=9% Similarity=0.193 Sum_probs=84.7
Q ss_pred cccCCCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 25 HQFSRGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 25 k~Y~~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
..|.-....+|+|++|+|. ||+|+.||.|||||..+.+... .++ +..+|.+|+++| |++|++.+ +++|+|||..-
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~-~~~-~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI-KLE-DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE-ECS-SCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE-EcC-CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 3444566799999999998 9999999999999987654333 344 688999999999 89887766 58899999631
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+ +.+. .+. +.-..+...|+ + .++.+++++.+..|.+||++.
T Consensus 89 ----~-----------------~~~~------~~~-~~~~V~~v~~s--p---~g~~l~sgs~dg~V~lwd~~~ 129 (902)
T 2oaj_A 89 ----Q-----------------KVLT------TVF-VPGKITSIDTD--A---SLDWMLIGLQNGSMIVYDIDR 129 (902)
T ss_dssp ----C-----------------SEEE------EEE-CSSCEEEEECC--T---TCSEEEEEETTSCEEEEETTT
T ss_pred ----C-----------------cEEE------EEc-CCCCEEEEEEC--C---CCCEEEEEcCCCcEEEEECCC
Confidence 0 1111 011 11233455676 2 268899999999999999864
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.92 E-value=4.1e-08 Score=86.94 Aligned_cols=113 Identities=12% Similarity=0.183 Sum_probs=85.2
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCC
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNG 107 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~ 107 (244)
...+++++++++|. ||+|+.||.|++||..+++..+ .+.++..+|.++++ ++++|++.+ +..|++||....
T Consensus 134 ~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~---- 206 (401)
T 4aez_A 134 STYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR-TMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIA---- 206 (401)
T ss_dssp TCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS----
T ss_pred CCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-EecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccC----
Confidence 56689999999997 9999999999999998776555 46789999999999 677888776 577999997421
Q ss_pred CcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 108 TTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 108 ~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
...+. .+.++....+...|+ + .+..+++++.+..+.+||++.
T Consensus 207 ----------------~~~~~------~~~~~~~~v~~~~~~--~---~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 207 ----------------NHQIG------TLQGHSSEVCGLAWR--S---DGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp ----------------SCEEE------EEECCSSCEEEEEEC--T---TSSEEEEEETTSCEEEEETTC
T ss_pred ----------------cceee------EEcCCCCCeeEEEEc--C---CCCEEEEEeCCCeEEEccCCC
Confidence 01111 233344444555666 3 257888899999999999975
No 108
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.90 E-value=8.5e-09 Score=86.81 Aligned_cols=70 Identities=14% Similarity=0.176 Sum_probs=60.5
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEe--CCCCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDV--TYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdv--S~DG~~lLaT~-~~~L~L~dt~ 101 (244)
...+++++++++|. ||+|+.||.|++||..+.+... +.++..+|.++++ ++||++|++.+ +..|++||..
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ--IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE--EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee--eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 55689999999997 9999999999999998765443 4579999999999 99999998776 5789999974
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.90 E-value=9.1e-09 Score=92.65 Aligned_cols=119 Identities=11% Similarity=0.123 Sum_probs=82.0
Q ss_pred CCceeEEEecC-CCc-EEEeCCCCcEEEEeccccc--cceecCCCCCCCeeEEEeCCCCCEEEEe-C-CcceEEEEeeec
Q 044877 30 GTNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMR--QAKTAFPGLGSPIRYVDVTYDGRWILGT-T-DTYLILICTLFT 103 (244)
Q Consensus 30 ~~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r--~aKt~lpglGdPI~~vdvS~DG~~lLaT-~-~~~L~L~dt~~~ 103 (244)
...+.++++++ ++. +|+|+.||.|++||.+... .....+.++..+|.+|+++|+|+++|++ + +..|++||..-.
T Consensus 231 ~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 231 TAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 34589999999 555 8999999999999997652 1222356789999999999999975544 3 578999997420
Q ss_pred cCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhhh
Q 044877 104 DKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQVK 178 (244)
Q Consensus 104 ~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV~ 178 (244)
. . .+. .+.++....+...|+ + +....+++++.+..+.+||+....
T Consensus 311 ----------~--------~--~~~------~~~~h~~~v~~i~~s--p--~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 311 ----------K--------L--KLH------SFESHKDEIFQVQWS--P--HNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp ----------T--------S--CSE------EEECCSSCEEEEEEC--S--SCTTEEEEEETTSCCEEEEGGGTT
T ss_pred ----------C--------C--CeE------EeecCCCCEEEEEEC--C--CCCCEEEEEeCCCcEEEEeCCCCc
Confidence 0 0 111 122333334455666 3 113457777889999999998853
No 110
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.89 E-value=1.9e-08 Score=89.02 Aligned_cols=116 Identities=13% Similarity=0.134 Sum_probs=82.5
Q ss_pred CCCceeEEEecCCCc--EEEeC--CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC---CcceEEEEee
Q 044877 29 RGTNFQCFASTGDGS--IVVGS--LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT---DTYLILICTL 101 (244)
Q Consensus 29 ~~~~Ft~vats~~G~--IavGS--~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~---~~~L~L~dt~ 101 (244)
....+++++++++|. +++|+ .||.|++||..+++..++ ++ ++.+|.+++++|||++|++++ ++.|++||..
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~-~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT-VD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE-EE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE-Ee-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 345689999999775 66654 899999999987765553 33 788999999999999999864 5889999964
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
- + ....+. .+.++....+...|+ + .+..+++++.+..+.+|++..
T Consensus 336 ~----~---------------~~~~~~------~~~~h~~~v~~~~~s--~---dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 336 S----S---------------GLTKQV------DIPAHDTRVLYSALS--P---DGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp T----T---------------EEEEEE------EEECCSSCCCEEEEC--T---TSSEEEEECTTSEEEEEECCC
T ss_pred C----c---------------cceeEE------EecCCCCCEEEEEEC--C---CCCEEEEEeCCCcEEEEECCC
Confidence 1 0 011111 122333333444555 2 257888899999999999864
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.89 E-value=3.5e-08 Score=88.13 Aligned_cols=115 Identities=12% Similarity=0.079 Sum_probs=85.7
Q ss_pred CCCceeEEEecCCCc--EE--EeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC---CcceEEEEee
Q 044877 29 RGTNFQCFASTGDGS--IV--VGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT---DTYLILICTL 101 (244)
Q Consensus 29 ~~~~Ft~vats~~G~--Ia--vGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~---~~~L~L~dt~ 101 (244)
....+.++++++.+. ++ .||.||.||+||..+++...+ +. .+.+|.++.++++++.+++++ ++.|+|||..
T Consensus 275 ~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~-~~-~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 275 HQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-VD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp CSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE-EE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred cCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee-ec-cccceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 344588999999654 44 468999999999988765553 33 677999999999999999764 5789999962
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
..+++. .+.||.-.-+...|+ + .++.++++|.+..|.+||+.+.
T Consensus 353 ---------------------~~~~v~------~l~gH~~~V~~l~~s--p---dg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 353 ---------------------TMAKVA------ELKGHTSRVLSLTMS--P---DGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp ---------------------TCCEEE------EECCCSSCEEEEEEC--T---TSSCEEEEETTTEEEEECCSCS
T ss_pred ---------------------CCcEEE------EEcCCCCCEEEEEEc--C---CCCEEEEEecCCeEEEEECCCC
Confidence 223343 455665555566776 2 2578999999999999998754
No 112
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.88 E-value=2e-08 Score=100.79 Aligned_cols=116 Identities=16% Similarity=0.240 Sum_probs=87.7
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCC--CCEEEEeC-CcceEEEEeeecc
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DTYLILICTLFTD 104 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~~L~L~dt~~~~ 104 (244)
....++|++++++|. ||+|+.||.|++||..+++... .++++..+|.+++++|+ +.++++.+ +..|++||..-
T Consensus 656 h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-- 732 (1249)
T 3sfz_A 656 HEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH-TYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-- 732 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-EEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS--
T ss_pred CCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE-EEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC--
Confidence 345689999999997 9999999999999998876555 57889999999999995 44666555 57799999631
Q ss_pred CCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhh
Q 044877 105 KNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQV 177 (244)
Q Consensus 105 ~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV 177 (244)
...+. .+.++.-..+...|+ + .++.+++++.+..+.+||++.-
T Consensus 733 -------------------~~~~~------~~~~h~~~v~~~~~s--p---~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 733 -------------------KECRN------TMFGHTNSVNHCRFS--P---DDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp -------------------SSEEE------EECCCSSCEEEEEEC--S---STTEEEEEESSSEEEEEEGGGT
T ss_pred -------------------cchhh------eecCCCCCEEEEEEe--c---CCCEEEEEECCCeEEEEeCCCC
Confidence 11222 233454455566776 2 2578999999999999999753
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.87 E-value=2.8e-08 Score=83.77 Aligned_cols=132 Identities=12% Similarity=0.122 Sum_probs=85.7
Q ss_pred cCCCCceeEEEecCCCcEEEeCCCCcEEEEeccc-ccc-ceecCCCCCCCeeEEEeCC-CCCEEEEeCC-cceEEEEeee
Q 044877 27 FSRGTNFQCFASTGDGSIVVGSLDGKIRLYSSNS-MRQ-AKTAFPGLGSPIRYVDVTY-DGRWILGTTD-TYLILICTLF 102 (244)
Q Consensus 27 Y~~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~-~r~-aKt~lpglGdPI~~vdvS~-DG~~lLaT~~-~~L~L~dt~~ 102 (244)
+......+++++++++ +++|+.||.|++||..+ ... .+.....+..+|.+|+++| ||+++++.+. ..|+|||...
T Consensus 147 ~~~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 147 TKVKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp SSSCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred EeeCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 4455678999999998 99999999999999976 432 2223456888999999999 9999998775 7799999643
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
. +.. .. ......++.+.....-.++....+...|+ + .+..+++++.+..+.+||++.
T Consensus 226 ~---~~~---~~------~~~~~~~~~~~~~~~~~~~~~~i~~~~~s--~---~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 226 Q---GDD---YN------SSKRFAFRCHRLNLKDTNLAYPVNSIEFS--P---RHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp T---CCS---TT------CTTCEEEECCCCCTTCCSSCCCEEEEEEC--T---TTCCEEEEETTSCEEEEETTT
T ss_pred C---Ccc---cc------cccceeeecccccccccccceeEEEEEEc--C---CCCEEEEecCCceEEEEcCcc
Confidence 1 000 00 00112222111100001112233444665 2 256788888899999999864
No 114
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.87 E-value=5e-09 Score=87.25 Aligned_cols=73 Identities=12% Similarity=0.170 Sum_probs=60.1
Q ss_pred CCCCceeEEEecCCCc-EEE--eCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 28 SRGTNFQCFASTGDGS-IVV--GSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 28 ~~~~~Ft~vats~~G~-Iav--GS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
....+..++++++++. +++ |+.||.|++||..+++..+ .|.+|.++|++|++||||++|++.+ +.+|+|||..
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~-~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVA-ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEE-EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEE-EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 3445678888888776 544 5689999999998887666 4789999999999999999998776 5889999963
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.86 E-value=2.4e-08 Score=98.57 Aligned_cols=68 Identities=18% Similarity=0.266 Sum_probs=56.3
Q ss_pred ceeEEEecCCCc-EEEeCCCCcEEEEecccccc-------ceec---CCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 32 NFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQ-------AKTA---FPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~-------aKt~---lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+.|+|+||+|. ||+|+.||.||+||..+++. .+++ ..|+.+.|.+|++|||| .+++..+++++|||.
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECC
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEEC
Confidence 488999999998 99999999999999976531 2322 37788999999999999 444555799999996
No 116
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.86 E-value=4.4e-09 Score=100.33 Aligned_cols=113 Identities=12% Similarity=0.045 Sum_probs=80.8
Q ss_pred CCceeEE--EecCCC-c-EEEeCCCCcEEEEeccccccceecCCCCC--CCeeEEEeCCCCCEEEEeC-CcceEEEEeee
Q 044877 30 GTNFQCF--ASTGDG-S-IVVGSLDGKIRLYSSNSMRQAKTAFPGLG--SPIRYVDVTYDGRWILGTT-DTYLILICTLF 102 (244)
Q Consensus 30 ~~~Ft~v--ats~~G-~-IavGS~dG~IRLyD~~~~r~aKt~lpglG--dPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~ 102 (244)
...+++| +.+++| + ||+||.||.|||||.++.+..+++ .++. ..|.+|+++|||+.+++++ +.+|+|||..-
T Consensus 308 ~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 308 DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 3458888 567888 6 899999999999999877655543 3332 3589999999999988877 47799999631
Q ss_pred ccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEech
Q 044877 103 TDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQ 175 (244)
Q Consensus 103 ~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~ 175 (244)
|+. +. .+.||.-.-+.-.|+ + .+..++++|.+..|.+||+.
T Consensus 387 ---------~~~------------~~------~l~gH~~~V~sva~S--p---~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 387 ---------AFA------------VH------PLVSRETTITAIGVS--R---LHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp ---------TTC------------CE------EEEECSSCEEEEECC--S---SCCBCEEEETTTEEECCBSC
T ss_pred ---------ccc------------ce------eeecCCCceEEEEeC--C---CCCeEEEEECCCEEEEEech
Confidence 111 11 233444333444666 3 25788999999999999974
No 117
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.82 E-value=3.8e-08 Score=88.06 Aligned_cols=107 Identities=17% Similarity=0.329 Sum_probs=78.0
Q ss_pred CceeEEEecCCC-cEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCC
Q 044877 31 TNFQCFASTGDG-SIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGT 108 (244)
Q Consensus 31 ~~Ft~vats~~G-~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~ 108 (244)
..++|++. +| .||+|+.||.|++||..+++..+ .++++..+|+++++ ||++|++.+ +.+|++||..- +
T Consensus 134 ~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~----~- 203 (435)
T 1p22_A 134 KGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKR-ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT----G- 203 (435)
T ss_dssp CCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEE-EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS----C-
T ss_pred CcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEE-EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC----C-
Confidence 34677776 44 49999999999999998876555 57899999999988 899998776 57899999731 1
Q ss_pred cccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 109 TKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 109 ~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
+.+. .+.++........|+ ...+++++.+..+.+||++.
T Consensus 204 ----------------~~~~------~~~~h~~~v~~l~~~-------~~~l~s~s~dg~i~vwd~~~ 242 (435)
T 1p22_A 204 ----------------EMLN------TLIHHCEAVLHLRFN-------NGMMVTCSKDRSIAVWDMAS 242 (435)
T ss_dssp ----------------CEEE------EECCCCSCEEEEECC-------TTEEEEEETTSCEEEEECSS
T ss_pred ----------------cEEE------EEcCCCCcEEEEEEc-------CCEEEEeeCCCcEEEEeCCC
Confidence 1222 222333333344554 35899999999999999864
No 118
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.78 E-value=4.2e-08 Score=95.86 Aligned_cols=121 Identities=12% Similarity=0.190 Sum_probs=83.9
Q ss_pred CCceeEEEecCC--Cc-EEEeCCCCcEEEEeccccc--cceecCCCCCCCeeEEEeCCC--CCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGD--GS-IVVGSLDGKIRLYSSNSMR--QAKTAFPGLGSPIRYVDVTYD--GRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~--G~-IavGS~dG~IRLyD~~~~r--~aKt~lpglGdPI~~vdvS~D--G~~lLaT~-~~~L~L~dt~ 101 (244)
...++|++++++ |. |++|+.||.|++||..+++ ... .+.++..+|++++++|+ |+++++.+ +..|++||..
T Consensus 53 ~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~-~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~ 131 (753)
T 3jro_A 53 EGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIA-VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 131 (753)
T ss_dssp SSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEE-EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred cCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccc-cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEee
Confidence 456999999987 76 9999999999999997664 333 46789999999999999 99998777 4789999974
Q ss_pred eccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeee--------cCCCCcceEEEEeeCCeEEEEe
Q 044877 102 FTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWV--------TENGKQERHLVATVGKFSVIWN 173 (244)
Q Consensus 102 ~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~--------tg~~~~E~~IvtStG~fvvvWn 173 (244)
-.. . ..+..+ .++....+...|+.. .....+..+++++.+..+.+||
T Consensus 132 ~~~--~--------------~~~~~~---------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd 186 (753)
T 3jro_A 132 ENG--T--------------TSPIII---------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK 186 (753)
T ss_dssp SSS--C--------------CCCEEE---------ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEE
T ss_pred cCC--C--------------cceeEe---------ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEe
Confidence 210 0 111111 122222223333310 0011367899999999999999
Q ss_pred chh
Q 044877 174 FQQ 176 (244)
Q Consensus 174 ~~k 176 (244)
++.
T Consensus 187 ~~~ 189 (753)
T 3jro_A 187 YNS 189 (753)
T ss_dssp EET
T ss_pred ccC
Confidence 875
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.77 E-value=4.9e-08 Score=87.37 Aligned_cols=119 Identities=18% Similarity=0.275 Sum_probs=77.8
Q ss_pred CceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEeeeccCCCCc
Q 044877 31 TNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTLFTDKNGTT 109 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~~~~~~~~~ 109 (244)
...+|++.++. .|++|+.||.||+||..+++... .+.++..+|.+|++ ||++|++.+ +..|++||..-....
T Consensus 297 ~~v~~~~~~~~-~l~~g~~dg~i~iwd~~~~~~~~-~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~--- 369 (435)
T 1p22_A 297 RGIACLQYRDR-LVVSGSSDNTIRLWDIECGACLR-VLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDP--- 369 (435)
T ss_dssp SCEEEEEEETT-EEEEEETTSCEEEEETTTCCEEE-EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTST---
T ss_pred CcEEEEEeCCC-EEEEEeCCCeEEEEECCCCCEEE-EEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCc---
Confidence 45778888543 69999999999999998776555 46789999999998 889988777 577999997421100
Q ss_pred ccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechhhh
Q 044877 110 KTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQVK 178 (244)
Q Consensus 110 ~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~kV~ 178 (244)
...+....++ .+.++....+...|+ +..+++++.+..+.+||+..-.
T Consensus 370 ---------~~~~~~~~~~------~~~~h~~~v~~l~~~-------~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 370 ---------RAPAGTLCLR------TLVEHSGRVFRLQFD-------EFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp ---------TSCTTTTEEE------EECCCSSCCCCEEEC-------SSCEEECCSSSEEEEEC-----
T ss_pred ---------cccccchhee------eccCCCCCeEEEEeC-------CCEEEEEeCCCEEEEEECCCCC
Confidence 0001111222 233443333344453 3678888899999999997643
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.76 E-value=1.3e-07 Score=84.43 Aligned_cols=65 Identities=18% Similarity=0.305 Sum_probs=52.5
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
.+|++.+++ .||+|+.||.||+||..+++..+ .++++..+|.+++++ +.+|++.+ +.+|++||..
T Consensus 122 ~~~~~~~g~-~l~sg~~dg~i~vwd~~~~~~~~-~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 122 ITCLQFCGN-RIVSGSDDNTLKVWSAVTGKCLR-TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEEEEETT-EEEEEETTSCEEEEETTTCCEEE-ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred EEEEEEcCC-EEEEEECCCcEEEEECCCCcEEE-EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 577776532 59999999999999998877555 578999999999997 56777665 5889999963
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.73 E-value=6.1e-08 Score=90.54 Aligned_cols=114 Identities=9% Similarity=0.006 Sum_probs=74.7
Q ss_pred eeEEEecC---CCc-EEEeCCCCcEEEEeccccccceecCCCCC---CCeeEEEeCCCCCEEEE-----------e--CC
Q 044877 33 FQCFASTG---DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLG---SPIRYVDVTYDGRWILG-----------T--TD 92 (244)
Q Consensus 33 Ft~vats~---~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglG---dPI~~vdvS~DG~~lLa-----------T--~~ 92 (244)
.+++++++ +|. ||+||.||.||+||..++++.+|+ .+++ ..+.++++||||+++++ + .+
T Consensus 181 v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL-~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 181 ETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM-HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp SCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE-ECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred eeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE-cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 45566666 445 889999999999999988877764 4433 36778899999998853 2 25
Q ss_pred cceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEE
Q 044877 93 TYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIW 172 (244)
Q Consensus 93 ~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvW 172 (244)
.+|+|||..- + +.++...-. .-.|+...|....|+ +..++++|.++.|.+|
T Consensus 260 ~tIklWd~~t----g-----------------k~l~v~~~~-~p~Gh~~~~lsg~~s-------g~~lASgS~DgTIkIW 310 (356)
T 2w18_A 260 FQLIVINPKT----T-----------------LSVGVMLYC-LPPGQAGRFLEGDVK-------DHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEEEEEETTT----T-----------------EEEEEEEEC-CCTTCCCCEEEEEEE-------TTEEEEEETTSCEEEE
T ss_pred cEEEEEECCC----C-----------------EEEEEEEee-ccCCCcceeEccccC-------CCEEEEEcCCCcEEEE
Confidence 7799998521 1 111100000 012444445555554 4677888899999999
Q ss_pred echh
Q 044877 173 NFQQ 176 (244)
Q Consensus 173 n~~k 176 (244)
|++.
T Consensus 311 Dl~t 314 (356)
T 2w18_A 311 DLLL 314 (356)
T ss_dssp ETTT
T ss_pred ECCC
Confidence 9853
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.70 E-value=2.2e-07 Score=82.96 Aligned_cols=20 Identities=10% Similarity=0.295 Sum_probs=17.0
Q ss_pred cceEEEEeeCCeEEEEechh
Q 044877 157 QERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 157 ~E~~IvtStG~fvvvWn~~k 176 (244)
++.+++++.+..+.+||++.
T Consensus 329 ~~~l~~~~~dg~i~vwd~~~ 348 (445)
T 2ovr_B 329 DNILVSGNADSTVKIWDIKT 348 (445)
T ss_dssp TTEEEEEETTSCEEEEETTT
T ss_pred CCEEEEEeCCCeEEEEECCC
Confidence 46888899999999999864
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.68 E-value=1.2e-07 Score=87.34 Aligned_cols=71 Identities=13% Similarity=0.015 Sum_probs=59.0
Q ss_pred CCceeEEEecCC-Cc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 30 GTNFQCFASTGD-GS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~-G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
...+++++++|+ +. +|+|+.||.||+||..+..... ...+++.+|.+++++|||++|++.+ +..|++||..
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~-~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVC-ATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEE-EEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCccee-eccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 456899999997 66 9999999999999997664333 2345889999999999999999877 5789999963
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.65 E-value=2.8e-07 Score=79.75 Aligned_cols=69 Identities=23% Similarity=0.300 Sum_probs=56.1
Q ss_pred CCceeEEEecCCCc-E-EEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-C-cceEEEEe
Q 044877 30 GTNFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-D-TYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~-~~L~L~dt 100 (244)
.....+++++++|. | ++|+.||.|++||..+++..+ .++ ++.+|.+++++|||++|++++ . ..|.+||.
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~-~~~-~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA-TVP-AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE-EEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEE-EEE-CCCCccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 34578999999997 5 788899999999998776554 344 455999999999999997665 3 78999996
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.61 E-value=3.8e-07 Score=80.03 Aligned_cols=68 Identities=4% Similarity=-0.026 Sum_probs=58.4
Q ss_pred ceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEe
Q 044877 32 NFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt 100 (244)
...+++++++|. +++|+.||.|++||..+.+... .+++++.++.+++++|||+++++++ +..|.+||.
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA-TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE-EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE-EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 578899999998 8999999999999997766555 4677899999999999999997665 478999996
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.60 E-value=1.1e-07 Score=88.73 Aligned_cols=56 Identities=11% Similarity=0.101 Sum_probs=47.0
Q ss_pred EEEeCCCCcEEEEeccccccceecCCCCCCCee-EEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 44 IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIR-YVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 44 IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~-~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
+|+||.||.|||||..++++..| |.++.+++. .+++||||++|++.+ +++|+|||.
T Consensus 298 lASgS~DgTIkIWDl~tGk~l~t-L~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 298 AAAILTSGTIAIWDLLLGQCTAL-LPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEEETTSCEEEEETTTCSEEEE-ECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEE-ecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 89999999999999999887775 677777655 699999999999888 588999995
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.49 E-value=2.1e-06 Score=74.25 Aligned_cols=70 Identities=20% Similarity=0.231 Sum_probs=55.9
Q ss_pred CCCceeEEEecCCCc-E-EEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-CC-cceEEEEe
Q 044877 29 RGTNFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-TD-TYLILICT 100 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~~-~~L~L~dt 100 (244)
......+++++++|. | ++++.+|.|++||..+++... .++ .+..+.+++++|||++|+++ +. ..|.+||.
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~ 187 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVS-VGRSPKGIAVTPDGTKVYVANFDSMSISVIDT 187 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEE-CCSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEe-cCCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 344578999999997 6 789999999999997765444 344 46677999999999999644 43 67999996
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.49 E-value=2.9e-06 Score=68.61 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=54.6
Q ss_pred CCceeEEEecCCCc-EE-EeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEee
Q 044877 30 GTNFQCFASTGDGS-IV-VGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G~-Ia-vGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt~ 101 (244)
.....+++.+|+|. |+ +++.+|.++||+..........+..+..+|.+++++|||++|+.++ +..+.||+..
T Consensus 128 ~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 128 NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 33477889999998 65 7889999999995321112224566788999999999999998665 4679999864
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.47 E-value=8.3e-07 Score=77.87 Aligned_cols=72 Identities=6% Similarity=-0.006 Sum_probs=56.8
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEecccccccee----cCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKT----AFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt----~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
......++++++++. +++++.+|.|++||..+++..++ .++++..+|.++++++||+.+++.+. ..|++||.
T Consensus 121 ~~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 121 TGFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp CSSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEET
T ss_pred CCCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEEC
Confidence 344456899999777 67788899999999987654442 23467789999999999999887775 78999996
No 130
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.46 E-value=9.4e-07 Score=83.83 Aligned_cols=70 Identities=17% Similarity=0.028 Sum_probs=56.7
Q ss_pred CCceeEEEecCCCc-EEEeCC-CC-----cEEEEeccccccceecCCCCCC------------------------CeeEE
Q 044877 30 GTNFQCFASTGDGS-IVVGSL-DG-----KIRLYSSNSMRQAKTAFPGLGS------------------------PIRYV 78 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~-dG-----~IRLyD~~~~r~aKt~lpglGd------------------------PI~~v 78 (244)
....++++.+|+|. ||+++. || .|++||..+++..+ ++...+. .|.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL-LVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE-EECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE-ccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 44578999999998 999998 88 89999998765333 3333332 38999
Q ss_pred EeCCCCCEEEEeCCcceEEEEe
Q 044877 79 DVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 79 dvS~DG~~lLaT~~~~L~L~dt 100 (244)
++||||++|+.++...|.+||.
T Consensus 115 ~~SpDg~~l~~~~~~~i~~~d~ 136 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGGELYLYDL 136 (741)
T ss_dssp EECTTSSEEEEEETTEEEEEES
T ss_pred EECCCCCEEEEEeCCcEEEEEC
Confidence 9999999999888888999996
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.45 E-value=3e-06 Score=76.83 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=55.4
Q ss_pred CCceeEEEecCCCc-EEEeCCCC---cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-CC---cceEEEEe
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDG---KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-TD---TYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG---~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~~---~~L~L~dt 100 (244)
.....+++++|+|. ||.++.++ .|++||..+++. + .+.++...+.++++||||++|+.+ +. ..|.+||.
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~-~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~ 254 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAV-R-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDL 254 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-E-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcE-E-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEEC
Confidence 34588999999998 99999886 999999987753 3 355677899999999999999844 42 33888985
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.38 E-value=2.3e-06 Score=72.29 Aligned_cols=69 Identities=17% Similarity=0.141 Sum_probs=53.8
Q ss_pred CCceeEEEecCCCc-E-EEeCCCCcEEEEecccccc---ceecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEEe
Q 044877 30 GTNFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQ---AKTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~---aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~dt 100 (244)
...-.+++++|+|. + +++..+|.|++||..+++. .. .++ .+..+.+++++|||++|++++. +.|.+||.
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~-~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~ 250 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLN-AVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQ 250 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEE-EEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEET
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceee-ecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEEC
Confidence 34457899999997 5 5556799999999977664 44 345 4677899999999999887763 66999996
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.36 E-value=8e-07 Score=83.88 Aligned_cols=67 Identities=13% Similarity=0.138 Sum_probs=53.8
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCC---CeeEEEeCCCCCEEEEeCC----------cceEEEE
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGS---PIRYVDVTYDGRWILGTTD----------TYLILIC 99 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGd---PI~~vdvS~DG~~lLaT~~----------~~L~L~d 99 (244)
..+++.+|+|.++..+.||.|++||..+++... ++.++.. .|.++++||||++|+.++. ..|.|||
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~-~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTV-LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEE-EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEE-EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 568899999996566899999999998876443 5565544 4999999999999997764 5688999
Q ss_pred e
Q 044877 100 T 100 (244)
Q Consensus 100 t 100 (244)
.
T Consensus 98 ~ 98 (723)
T 1xfd_A 98 I 98 (723)
T ss_dssp S
T ss_pred C
Confidence 6
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.34 E-value=9.1e-06 Score=73.63 Aligned_cols=68 Identities=16% Similarity=0.004 Sum_probs=53.9
Q ss_pred CceeEEEecCCCc-EE-EeCCCCc--EEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC--c--ceEEEEe
Q 044877 31 TNFQCFASTGDGS-IV-VGSLDGK--IRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD--T--YLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~~G~-Ia-vGS~dG~--IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~--~L~L~dt 100 (244)
....+++++|+|. || +++.+|. |++||..+++ .+ .+.++...+.++++||||++|+.++. . .|.+||.
T Consensus 223 ~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~-~~-~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 223 RHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ-IR-QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC-EE-ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC-EE-eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 3578999999998 77 7888776 9999997764 33 46668889999999999999998874 2 4666674
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.24 E-value=1e-05 Score=67.61 Aligned_cols=72 Identities=10% Similarity=0.046 Sum_probs=53.7
Q ss_pred CCCceeEEEecCCCc-EEEeCCC-CcEEEEecc--cccc-ceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEee
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLD-GKIRLYSSN--SMRQ-AKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICTL 101 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~d-G~IRLyD~~--~~r~-aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt~ 101 (244)
......+++++++|. |++++.+ |.|++||.. +++. ....++..+ .+.+++++|||++|++++ ...|.+||..
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLE 114 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECC
Confidence 344567899999998 8888876 999999985 3321 112344333 889999999999998776 4669999973
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.23 E-value=2.2e-05 Score=66.31 Aligned_cols=67 Identities=13% Similarity=0.173 Sum_probs=55.4
Q ss_pred eeEEEecCCCc-EEEeC--CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGS--LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS--~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
..+++++++|. +++++ .+|.|.+||..+.+..+ .++..+..+.+++++|||++|++++. +.|.+||.
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~ 213 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIKLKT-AIQNTGKMSTGLALDSEGKRLYTTNADGELITIDT 213 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEE-EECCCCTTCCCCEEETTTTEEEEECTTSEEEEEET
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCceEE-EecCCCCccceEEECCCCCEEEEEcCCCeEEEEEC
Confidence 57899999987 66665 58999999998776554 46767888999999999999998875 67999996
No 137
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.18 E-value=7.5e-06 Score=82.44 Aligned_cols=69 Identities=12% Similarity=0.021 Sum_probs=58.8
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-----------cceEEE
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-----------TYLILI 98 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-----------~~L~L~ 98 (244)
..+.+++++|+|. ||+++.++.|++||..+++ .+..++++..+|.++++||||++|++++. ..|.+|
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~-~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~ 457 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK-PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 457 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEECCCCc-eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEE
Confidence 4578999999998 9999999999999998775 44456678889999999999999987753 379999
Q ss_pred Ee
Q 044877 99 CT 100 (244)
Q Consensus 99 dt 100 (244)
|.
T Consensus 458 d~ 459 (1045)
T 1k32_A 458 DM 459 (1045)
T ss_dssp ET
T ss_pred EC
Confidence 96
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.17 E-value=1.5e-05 Score=75.63 Aligned_cols=66 Identities=11% Similarity=0.078 Sum_probs=56.1
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccc--cceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMR--QAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r--~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
+.++++||+|. ||+++. |.|++||..+++ ..+ .+..++.++.++.+||||++|+..+...|.+||.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~-~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~ 179 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR-QLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDL 179 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC-BCCCSSSCEEEEEECTTSSEEEEEETTEEEEEET
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE-EcccCCcccccccCCCCCCEEEEEeCCcEEEEec
Confidence 68999999998 888776 999999997762 233 3566788999999999999999888888999996
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.15 E-value=4.4e-05 Score=61.59 Aligned_cols=70 Identities=13% Similarity=0.058 Sum_probs=53.8
Q ss_pred CCceeEEEecCCCc-EEEeCCCCcEEEEeccc-cccceecCCCC-CCCeeEEEeCCCCCEEEEeCC---cceEEEEee
Q 044877 30 GTNFQCFASTGDGS-IVVGSLDGKIRLYSSNS-MRQAKTAFPGL-GSPIRYVDVTYDGRWILGTTD---TYLILICTL 101 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS~dG~IRLyD~~~-~r~aKt~lpgl-GdPI~~vdvS~DG~~lLaT~~---~~L~L~dt~ 101 (244)
...+.+++++|+|. ||+++ +|.|++||..+ ++ .+..+.+. ...|.++++||||++|++++. ....||...
T Consensus 41 ~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~ 116 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS-PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLP 116 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS-CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEE
T ss_pred CcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC-ceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEE
Confidence 45688999999998 77765 89999999977 64 34345555 478999999999999998872 246666653
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.15 E-value=2e-05 Score=66.44 Aligned_cols=66 Identities=21% Similarity=0.076 Sum_probs=51.6
Q ss_pred EEEecCCCc-EEEeCC-CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCc----ceEEEEe
Q 044877 35 CFASTGDGS-IVVGSL-DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDT----YLILICT 100 (244)
Q Consensus 35 ~vats~~G~-IavGS~-dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~----~L~L~dt 100 (244)
+++++++|. +++++. ++.|++||..+++.....++....|+.+++++|||++|+++... .|.+||.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEET
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEEC
Confidence 999999997 665555 99999999987764133455556666669999999999966655 8999996
No 141
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.11 E-value=0.00014 Score=61.05 Aligned_cols=65 Identities=11% Similarity=-0.067 Sum_probs=49.3
Q ss_pred eEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCC--CeeEEEeCCCCCEEEEeC--CcceEEEEe
Q 044877 34 QCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGS--PIRYVDVTYDGRWILGTT--DTYLILICT 100 (244)
Q Consensus 34 t~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGd--PI~~vdvS~DG~~lLaT~--~~~L~L~dt 100 (244)
+.+++++++. +++++.+|.|++||..+++..+ .++ ++. .+.+++++|||+++++++ ...|.+||.
T Consensus 3 ~g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 3 TGPALKAGHEYMIVTNYPNNLHVVDVASDTVYK-SCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp -CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE-EEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred ccccccCCCEEEEEeCCCCeEEEEECCCCcEEE-EEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 3567778877 7889999999999997765444 334 334 678999999999876554 467999996
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.10 E-value=3.3e-05 Score=64.51 Aligned_cols=72 Identities=8% Similarity=0.007 Sum_probs=53.9
Q ss_pred CCceeEEEecCCCc-EEEeC-CCCcEEEEeccc-cccce----ecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEe
Q 044877 30 GTNFQCFASTGDGS-IVVGS-LDGKIRLYSSNS-MRQAK----TAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS-~dG~IRLyD~~~-~r~aK----t~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt 100 (244)
.....+++++++|. |++++ .+|.|++||... ++... ......|..+.+++++|||++|++++ .+.|.+||.
T Consensus 128 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~ 207 (343)
T 1ri6_A 128 LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWEL 207 (343)
T ss_dssp CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEES
T ss_pred CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 34467899999997 77777 899999999865 32211 11223567899999999999988765 477999997
Q ss_pred e
Q 044877 101 L 101 (244)
Q Consensus 101 ~ 101 (244)
.
T Consensus 208 ~ 208 (343)
T 1ri6_A 208 K 208 (343)
T ss_dssp S
T ss_pred c
Confidence 4
No 143
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.01 E-value=4.2e-05 Score=72.74 Aligned_cols=66 Identities=12% Similarity=0.231 Sum_probs=56.7
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEec--cccccceecCCCCCCCeeEEEeCC----CCCEEEEeC--CcceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSS--NSMRQAKTAFPGLGSPIRYVDVTY----DGRWILGTT--DTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~--~~~r~aKt~lpglGdPI~~vdvS~----DG~~lLaT~--~~~L~L~dt 100 (244)
..+++++|+|. +++++.||.|++||. .+.+..++ ++ .|....+|++|| ||++|++++ +.+|.+||.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~-i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE-IK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE-EE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE-Ee-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 56899999997 999999999999999 67665553 56 677789999999 999999887 488999996
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.97 E-value=3.2e-05 Score=73.06 Aligned_cols=68 Identities=10% Similarity=0.004 Sum_probs=54.8
Q ss_pred CceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 31 TNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
..+++++++|++.++.+ .+|.|++||..+++ .. .+...+.++.++.+||||++|+.+.+..|.+||..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~-~~-~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARK-VT-YLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTE-EE-EEECCTTCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCc-eE-EccCCcccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 56899999999666665 45999999997764 33 23446778999999999999988778889999973
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.97 E-value=3.3e-05 Score=72.85 Aligned_cols=67 Identities=7% Similarity=0.018 Sum_probs=54.0
Q ss_pred ceeEEEecCCCc-EEEeCCC---------CcEEEEeccccccceecCC---CCCCCeeEEEeCCCCCEEEEeCCcceEEE
Q 044877 32 NFQCFASTGDGS-IVVGSLD---------GKIRLYSSNSMRQAKTAFP---GLGSPIRYVDVTYDGRWILGTTDTYLILI 98 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~d---------G~IRLyD~~~~r~aKt~lp---glGdPI~~vdvS~DG~~lLaT~~~~L~L~ 98 (244)
...++++||+|. ||+++.+ +.|++||..+++. + .+. ++...|.++.+||||++|+..+...|.+|
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~-~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~ 139 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-Q-SLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYC 139 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-E-ECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-E-eccCCccccccccccEECCCCCEEEEEECCeEEEE
Confidence 378999999998 8888764 7888999977653 3 233 33445999999999999998888889999
Q ss_pred Ee
Q 044877 99 CT 100 (244)
Q Consensus 99 dt 100 (244)
|.
T Consensus 140 ~~ 141 (723)
T 1xfd_A 140 AH 141 (723)
T ss_dssp SS
T ss_pred EC
Confidence 96
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.96 E-value=2.2e-05 Score=74.46 Aligned_cols=66 Identities=14% Similarity=0.095 Sum_probs=53.9
Q ss_pred eeEEEecCCCc-EEEeCC---------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSL---------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~---------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
..+++.||+|. ||.++. ++.|++||..+++... ...+...+.++.+||||++|+.+.++.|.+||.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~--~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR--GNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--SSCCCSSBCCEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc--ceecCcccccceECCCCCEEEEEECCeEEEEeC
Confidence 67999999998 888876 7999999997765311 012346799999999999999888899999986
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.95 E-value=0.00012 Score=61.59 Aligned_cols=68 Identities=1% Similarity=-0.098 Sum_probs=50.0
Q ss_pred ceeEEEecCCCc-E-EEeCCCCcEEEEeccccccceecCCCCC--CC-------eeEEEeCCCCCEEEEeC---CcceEE
Q 044877 32 NFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQAKTAFPGLG--SP-------IRYVDVTYDGRWILGTT---DTYLIL 97 (244)
Q Consensus 32 ~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~aKt~lpglG--dP-------I~~vdvS~DG~~lLaT~---~~~L~L 97 (244)
.-.+++++++|. + ++++.+|.|++||..+++..++ ++..+ .| +.++.++|||+++++++ +..|.+
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGR-LVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWV 168 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-EESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEE-EecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEE
Confidence 356889999997 5 4556689999999987664442 33211 11 68999999999988776 456999
Q ss_pred EEe
Q 044877 98 ICT 100 (244)
Q Consensus 98 ~dt 100 (244)
||.
T Consensus 169 ~d~ 171 (353)
T 3vgz_A 169 VDG 171 (353)
T ss_dssp EET
T ss_pred EcC
Confidence 996
No 148
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.95 E-value=0.0011 Score=57.92 Aligned_cols=71 Identities=11% Similarity=0.120 Sum_probs=52.3
Q ss_pred CCceeEEEecCCCc-EEEeC-CCCcEEEEecc-ccccc---eecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEEe
Q 044877 30 GTNFQCFASTGDGS-IVVGS-LDGKIRLYSSN-SMRQA---KTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~-IavGS-~dG~IRLyD~~-~~r~a---Kt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~dt 100 (244)
.....+++++|+|. +++++ .++.|++||.. +++.. ...+|..|..+.++++||||++|++++. +.|.+|+.
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEE
Confidence 34577999999997 77665 47899999986 44321 1122334778999999999999987663 67999885
No 149
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.94 E-value=2.1e-05 Score=74.61 Aligned_cols=65 Identities=12% Similarity=0.069 Sum_probs=52.1
Q ss_pred EEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCC---CeeEEEeCCCCCEEEEeCC----------cceEEEEe
Q 044877 35 CFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGS---PIRYVDVTYDGRWILGTTD----------TYLILICT 100 (244)
Q Consensus 35 ~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGd---PI~~vdvS~DG~~lLaT~~----------~~L~L~dt 100 (244)
+++.+++|.++..+.||.|++||..+++ .+.++.+... .|.++++||||++|+.++. ..|.+||.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQ-SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCC-EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCc-EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 7888999997777789999999998775 3434554433 4999999999999987764 67999996
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.91 E-value=5.1e-05 Score=72.12 Aligned_cols=64 Identities=19% Similarity=0.160 Sum_probs=53.3
Q ss_pred EEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 35 CFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 35 ~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
+.+++++|. +++++.||.|++||..+++...+ ++ .|..+.++++||||++|++++ +++|.+||.
T Consensus 142 ~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~-i~-~g~~~~~v~~spdg~~l~v~~~d~~V~v~D~ 207 (543)
T 1nir_A 142 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKV-ID-TGYAVHISRMSASGRYLLVIGRDARIDMIDL 207 (543)
T ss_dssp CSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEE-EE-CSTTEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred ccccCCCCEEEEEEcCCCeEEEEECCCceEEEE-Ee-cCcccceEEECCCCCEEEEECCCCeEEEEEC
Confidence 445788888 88999999999999988776664 55 355588999999999999887 488999997
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.89 E-value=0.00026 Score=61.04 Aligned_cols=71 Identities=8% Similarity=0.072 Sum_probs=52.2
Q ss_pred CceeEEEecCCCc-EEEeC-CCCcEEEEecccccc--c--eecCCCCCCCeeEEEeCCCCCEEEEeCC---cceEEEEee
Q 044877 31 TNFQCFASTGDGS-IVVGS-LDGKIRLYSSNSMRQ--A--KTAFPGLGSPIRYVDVTYDGRWILGTTD---TYLILICTL 101 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS-~dG~IRLyD~~~~r~--a--Kt~lpglGdPI~~vdvS~DG~~lLaT~~---~~L~L~dt~ 101 (244)
..-.+++++|+|. +++++ .+|.|++||..+++. . -..++..+....+|.+||||++|++++. +.|.+|+..
T Consensus 211 ~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 211 SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 3356899999997 76666 699999999864321 1 1134555566789999999999977653 569999964
No 152
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.87 E-value=0.00027 Score=58.93 Aligned_cols=67 Identities=9% Similarity=0.146 Sum_probs=50.3
Q ss_pred ceeEEEecCCCcEEEe-CCCCcEEEEeccccccceecCCCCC--CCeeEEEeCCCCCEEEEeCC-c-ceEEEEe
Q 044877 32 NFQCFASTGDGSIVVG-SLDGKIRLYSSNSMRQAKTAFPGLG--SPIRYVDVTYDGRWILGTTD-T-YLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~IavG-S~dG~IRLyD~~~~r~aKt~lpglG--dPI~~vdvS~DG~~lLaT~~-~-~L~L~dt 100 (244)
...+++.+++|.|+++ +.++.|++||..+. ...+ +...| ..+.+|++++||+.++++.. + .|.+||.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~-~~~~-~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ-YLRQ-IGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEETTCC-EEEE-ESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcCCCC-EEEE-EccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC
Confidence 3578999999996554 67899999998543 3332 33333 57899999999998888875 4 8999983
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.85 E-value=0.00015 Score=60.28 Aligned_cols=69 Identities=7% Similarity=-0.100 Sum_probs=51.5
Q ss_pred ceeEEEecCCCc-E-EEeCCCCcEEEEeccccccceec-CCC---CCCCeeEEEeCCCCCEEEEeC-------------C
Q 044877 32 NFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQAKTA-FPG---LGSPIRYVDVTYDGRWILGTT-------------D 92 (244)
Q Consensus 32 ~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~aKt~-lpg---lGdPI~~vdvS~DG~~lLaT~-------------~ 92 (244)
...+++++++|. + ++++.+|.|++||..+++..++. ++. .+..+.++.++|||++|++++ +
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 357899999995 4 66777899999998776544322 121 123788999999999998774 4
Q ss_pred cceEEEEe
Q 044877 93 TYLILICT 100 (244)
Q Consensus 93 ~~L~L~dt 100 (244)
..|.+||.
T Consensus 115 ~~i~v~d~ 122 (337)
T 1pby_B 115 TRVALYDA 122 (337)
T ss_dssp CEEEEEET
T ss_pred ceEEEEEC
Confidence 77999996
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.84 E-value=4e-05 Score=63.81 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=52.0
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
..+++++++|. |+++ +|.|++||..+++..+ .++ .+..+.+++++|||++|++++. +.|.+||.
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIK-RVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEE-EEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEET
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcc-eec-CCCceeeEEECCCCCEEEEEcCCCcEEEEEC
Confidence 45799999997 7777 7999999997765444 344 5677899999999999988774 77999996
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.81 E-value=0.00073 Score=57.69 Aligned_cols=69 Identities=13% Similarity=0.078 Sum_probs=50.0
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEecc-ccccc--eecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEee
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSN-SMRQA--KTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~-~~r~a--Kt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt~ 101 (244)
..+++++|+|. ++++..++.|++||.. +++.. .......|....+++++|||++|++++ .+.|.+|+..
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYD 217 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 56899999999 5566678899999986 33211 111122466788999999999888765 3679999864
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=97.79 E-value=0.00018 Score=67.86 Aligned_cols=59 Identities=5% Similarity=-0.088 Sum_probs=43.9
Q ss_pred CceeEEEecCCCc-EEEeCCCCcEEEEeccc-----cccceecCCCCCCC--------------eeEEEeCCCCCEEEEe
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGKIRLYSSNS-----MRQAKTAFPGLGSP--------------IRYVDVTYDGRWILGT 90 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~IRLyD~~~-----~r~aKt~lpglGdP--------------I~~vdvS~DG~~lLaT 90 (244)
..+.+++.+|+|. ||. +.++.|++||..+ ++..+ ........ +.++.+||||++|+.+
T Consensus 121 ~~~~~~~~SpdG~~la~-~~~~~i~v~~~~~~~~~~g~~~~-~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 121 EETASLDFSPVGDRVAY-VRNHNLYIARGGKLGEGMSRAIA-VTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp TCCTTCEECTTSSEEEE-EETTEEEEEECBCTTSCCCCCEE-SCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred ccccCCcCCCCCCEEEE-EECCeEEEEecCcccccCCCcEE-eccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 3467899999997 777 5789999999977 54333 33322222 5899999999999977
Q ss_pred C
Q 044877 91 T 91 (244)
Q Consensus 91 ~ 91 (244)
+
T Consensus 199 ~ 199 (706)
T 2z3z_A 199 R 199 (706)
T ss_dssp E
T ss_pred E
Confidence 5
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.77 E-value=0.00065 Score=58.52 Aligned_cols=69 Identities=17% Similarity=0.182 Sum_probs=49.6
Q ss_pred eeEEEecCCCc-EEE-eCCCCcEEEEecccccc------c------eecCCCCCCCeeEEEeCCCCCEEEEeC--CcceE
Q 044877 33 FQCFASTGDGS-IVV-GSLDGKIRLYSSNSMRQ------A------KTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLI 96 (244)
Q Consensus 33 Ft~vats~~G~-Iav-GS~dG~IRLyD~~~~r~------a------Kt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~ 96 (244)
..+++++|+|. |++ +..++.|++||...... . .......+..+.++++||||++|++++ .+.|.
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 236 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVI 236 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEE
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEE
Confidence 36799999997 655 44589999998743221 0 111223567789999999999998776 47799
Q ss_pred EEEee
Q 044877 97 LICTL 101 (244)
Q Consensus 97 L~dt~ 101 (244)
+||..
T Consensus 237 v~~~~ 241 (361)
T 3scy_A 237 AFRYA 241 (361)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99974
No 158
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.77 E-value=9.1e-05 Score=63.37 Aligned_cols=70 Identities=10% Similarity=0.125 Sum_probs=53.1
Q ss_pred CceeEEEecCCCc-E-EEeCCCCcEEEEeccc---cccceecCCCCCCCeeEEEeCCCCCEEEEeC-C-cceEEEEee
Q 044877 31 TNFQCFASTGDGS-I-VVGSLDGKIRLYSSNS---MRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-D-TYLILICTL 101 (244)
Q Consensus 31 ~~Ft~vats~~G~-I-avGS~dG~IRLyD~~~---~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~-~~L~L~dt~ 101 (244)
....+++++|+|. | +++..++.|++||... .+... .++..|..+.+|++||||++|++++ . +.|.+|+..
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~-~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQ-QISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEE-EEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeE-EEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 4467899999997 6 5566799999999751 12222 4566678889999999999998776 3 679999753
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.76 E-value=8.8e-05 Score=68.86 Aligned_cols=65 Identities=12% Similarity=0.006 Sum_probs=52.3
Q ss_pred eEEEecCCCc-EEEeCCC----CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-c--ceEEEEe
Q 044877 34 QCFASTGDGS-IVVGSLD----GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-T--YLILICT 100 (244)
Q Consensus 34 t~vats~~G~-IavGS~d----G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~--~L~L~dt 100 (244)
.+++++|+|. ||.++.+ +.|++||..+++ .++ |.+....+.++++||||++|+++.. . .|.+||.
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~-~~~-l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~ 225 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG-LRV-FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDP 225 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC-CEE-ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECT
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC-ceE-eecCCCccccceECCCCCEEEEccCCCeeEEEEEcC
Confidence 6899999998 8878877 789999987664 443 4567788999999999999985443 4 5889985
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.70 E-value=8.2e-05 Score=62.44 Aligned_cols=65 Identities=14% Similarity=0.021 Sum_probs=52.2
Q ss_pred ceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 32 NFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
...++++++ +|. ++++ +|.|++||..+++..+ .++ ++..+.++++||||++|++++. +.|.+||+
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~-~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIK-AAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNP 323 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEE-EEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEET
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEE-EEc-CCCCccceEECCCCCEEEEecCCCeEEEEec
Confidence 456888999 997 6766 9999999998766444 344 5667889999999999988764 77999996
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.61 E-value=0.0004 Score=69.96 Aligned_cols=66 Identities=12% Similarity=0.218 Sum_probs=53.9
Q ss_pred ceeEEEecCCCc-EEEeCCCCcEE-EEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 32 NFQCFASTGDGS-IVVGSLDGKIR-LYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG~IR-LyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
.+.+++++ +|. |+.++.++.|. +||..+.+ .+. +.++...+.++++||||++|+.++. ..|.+||.
T Consensus 339 ~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~-~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK-AEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEEEEEEEETTEEEEEEEETTTCC-EEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEeeeEc-CCCeEEEEECCCceEEEEECCCCC-ceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 57788999 987 88888888888 88986653 443 3477789999999999999987764 67999996
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.56 E-value=0.0002 Score=69.30 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=48.2
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCC-----CeeEEEeCCCCCEEEEeCC----------cceE
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGS-----PIRYVDVTYDGRWILGTTD----------TYLI 96 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGd-----PI~~vdvS~DG~~lLaT~~----------~~L~ 96 (244)
..+++.+++|. |+++ ||.|++||..++++ +.++.++.. ...++.+||||++|+..+. ..|.
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNS-SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCE-EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCce-EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45899999998 5554 99999999988764 445665543 2345888999999998775 3456
Q ss_pred EEEe
Q 044877 97 LICT 100 (244)
Q Consensus 97 L~dt 100 (244)
|||.
T Consensus 96 ~~d~ 99 (740)
T 4a5s_A 96 IYDL 99 (740)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8886
No 163
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.48 E-value=0.00088 Score=64.39 Aligned_cols=59 Identities=14% Similarity=0.243 Sum_probs=44.6
Q ss_pred ceeEEEecCCCc-EEEeCCCC-----cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC
Q 044877 32 NFQCFASTGDGS-IVVGSLDG-----KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG-----~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~ 92 (244)
.+.+++.||+|. ||.++.++ .|++||..+++.....+++. .+.++++||||++|+.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~--~~~~~~wspDg~~l~~~~~ 190 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV--KFSCMAWTHDGKGMFYNAY 190 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE--CSCCEEECTTSSEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc--ccceEEEEeCCCEEEEEEE
Confidence 478999999998 77666544 89999998776444333332 3778999999999987763
No 164
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.48 E-value=0.00032 Score=62.55 Aligned_cols=63 Identities=8% Similarity=0.071 Sum_probs=50.0
Q ss_pred EEecCCCc-EEEeCC-----------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 36 FASTGDGS-IVVGSL-----------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 36 vats~~G~-IavGS~-----------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
++++++|. +++... .+.|.+||..+.+..++ +|. |. ..+|.+||||++|.+++.+.|.+||+.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-i~~-~~-p~~ia~spdg~~l~v~n~~~v~v~D~~ 333 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-IPG-RD-ALSMTIDQQRNLMLTLDGGNVNVYDIS 333 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-EEC-TT-CCEEEEETTTTEEEEECSSCEEEEECS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-Eec-CC-eeEEEECCCCCEEEEeCCCeEEEEECC
Confidence 68888865 666533 35899999988876664 664 44 999999999999998888889999963
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=97.42 E-value=0.00017 Score=62.16 Aligned_cols=68 Identities=24% Similarity=0.179 Sum_probs=53.3
Q ss_pred eeEEEecCCCc-EEEeCC-CCc--EEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEee
Q 044877 33 FQCFASTGDGS-IVVGSL-DGK--IRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~-dG~--IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt~ 101 (244)
|+..+.+|+|. ||.++. +|. |.+||..+++ .+.+.++.+.++.++.+||||++|+.... ..|.+||..
T Consensus 38 ~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~-~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV-ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCE-EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETT
T ss_pred hcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCc-eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECC
Confidence 34478899998 888887 774 8888987765 44466778888878899999999987775 569999853
No 166
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.31 E-value=0.0017 Score=62.38 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=43.7
Q ss_pred ceeEEEecCCCc-EE-----EeCCCCcEEEEeccccccc-eecCCCCCCCeeEEEeCCCCCEEEEeCC
Q 044877 32 NFQCFASTGDGS-IV-----VGSLDGKIRLYSSNSMRQA-KTAFPGLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 32 ~Ft~vats~~G~-Ia-----vGS~dG~IRLyD~~~~r~a-Kt~lpglGdPI~~vdvS~DG~~lLaT~~ 92 (244)
.+.++++||+|. || .|+.+..|++||..+++.. .+.+++. ...++++||||++|+.++.
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~--~~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGG--KYATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCC--TTCCCEECTTSSEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcc--cccceEEecCCCEEEEEEe
Confidence 578999999998 77 5667789999999876533 2223322 1268999999999997764
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.24 E-value=0.0015 Score=61.14 Aligned_cols=69 Identities=9% Similarity=-0.068 Sum_probs=53.1
Q ss_pred CceeEEEecCCCc-EEEeCCC----------CcEEEEeccc------cccceecCCCCCCCeeEEEeCCCCCEEEEeC-C
Q 044877 31 TNFQCFASTGDGS-IVVGSLD----------GKIRLYSSNS------MRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-D 92 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~d----------G~IRLyD~~~------~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~ 92 (244)
..+.+++.+|+|. ||.++.+ ..|++||..+ ++ .+.+.....+.+.++++||||++|+.++ +
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEEC
T ss_pred ccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECC
Confidence 3578999999998 8888887 6899999976 43 4433314557889999999999998665 2
Q ss_pred --------cceEEEEe
Q 044877 93 --------TYLILICT 100 (244)
Q Consensus 93 --------~~L~L~dt 100 (244)
+.|.+||.
T Consensus 209 ~~~~~~~~~~i~~~d~ 224 (662)
T 3azo_A 209 HPRMPWEGTELKTARV 224 (662)
T ss_dssp TTCCTTTCEEEEEEEE
T ss_pred CCCCCCCCcEEEEEEE
Confidence 35888886
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.22 E-value=0.0004 Score=67.22 Aligned_cols=66 Identities=11% Similarity=0.095 Sum_probs=54.6
Q ss_pred eeEEEecCCCc-EEEeCCC---------CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLD---------GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~d---------G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
|..++.||+|. ||.++.+ |+|.+||..+++ .+ .|.++...+..+.+||||++|+.+.++.|.+||.
T Consensus 64 ~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~-~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 139 (740)
T 4a5s_A 64 INDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ-LI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIE 139 (740)
T ss_dssp CCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE-EC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESS
T ss_pred ccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc-EE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEEC
Confidence 45588999998 8888886 677799998775 44 3555677899999999999998888888999985
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.20 E-value=0.0014 Score=54.57 Aligned_cols=69 Identities=12% Similarity=0.182 Sum_probs=48.2
Q ss_pred ceeEEEecCCCcEEEeC-CCC-cEEEEeccccccceecCCCC-CCCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 32 NFQCFASTGDGSIVVGS-LDG-KIRLYSSNSMRQAKTAFPGL-GSPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 32 ~Ft~vats~~G~IavGS-~dG-~IRLyD~~~~r~aKt~lpgl-GdPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
.-.+++++++|.|++++ .++ .|++||..+ +...+...+. ...+.+|+++|||+.+++..++.|++|+..
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~ 279 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQDG-QLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYV 279 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECTTS-CEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECS
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcc
Confidence 45789999999965554 454 999999743 3333221122 234789999999997777556789999863
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.15 E-value=0.00039 Score=61.93 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=51.3
Q ss_pred EEEecCCCc-EEEeC----------CCCcEEEEeccccccceecCCC------CCCCeeEEEeCCCCCEEEEeC---Ccc
Q 044877 35 CFASTGDGS-IVVGS----------LDGKIRLYSSNSMRQAKTAFPG------LGSPIRYVDVTYDGRWILGTT---DTY 94 (244)
Q Consensus 35 ~vats~~G~-IavGS----------~dG~IRLyD~~~~r~aKt~lpg------lGdPI~~vdvS~DG~~lLaT~---~~~ 94 (244)
.++++++|. +++++ .++.|.+||..+.+..++ ++- .|....+|.+||||+||+++. .+.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~-i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~ 132 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKE-ISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATS 132 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEE-EEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEE-EEcCccccccCCCcceEEECCCCCEEEEECCCCCCe
Confidence 899999997 88876 367799999876654443 331 356778999999999999775 367
Q ss_pred eEEEEee
Q 044877 95 LILICTL 101 (244)
Q Consensus 95 L~L~dt~ 101 (244)
|.+||+.
T Consensus 133 v~v~d~~ 139 (361)
T 2oiz_A 133 IGIVDVA 139 (361)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999974
No 171
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.12 E-value=0.00047 Score=63.98 Aligned_cols=68 Identities=6% Similarity=-0.052 Sum_probs=54.4
Q ss_pred CceeEEEecCCCc-EEEeCCCC--cEEEEeccccccceecCCCCCCCeeEEE--------eCCCCCEEEEeC-CcceEEE
Q 044877 31 TNFQCFASTGDGS-IVVGSLDG--KIRLYSSNSMRQAKTAFPGLGSPIRYVD--------VTYDGRWILGTT-DTYLILI 98 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG--~IRLyD~~~~r~aKt~lpglGdPI~~vd--------vS~DG~~lLaT~-~~~L~L~ 98 (244)
....++++||+|. ||+++.+| .|++||..+++ .+ .+.++...|.+++ +||||+.+++++ +..++||
T Consensus 195 ~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~ 272 (582)
T 3o4h_A 195 GSFSSASISPGMKVTAGLETAREARLVTVDPRDGS-VE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVF 272 (582)
T ss_dssp CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC-EE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEE
T ss_pred CccccceECCCCCEEEEccCCCeeEEEEEcCCCCc-EE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEE
Confidence 3468999999998 88888899 89999997765 34 6777777888888 999995555555 4779999
Q ss_pred Ee
Q 044877 99 CT 100 (244)
Q Consensus 99 dt 100 (244)
+.
T Consensus 273 ~~ 274 (582)
T 3o4h_A 273 ID 274 (582)
T ss_dssp ET
T ss_pred EE
Confidence 85
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.06 E-value=0.0021 Score=54.45 Aligned_cols=68 Identities=12% Similarity=0.193 Sum_probs=53.3
Q ss_pred ceeEEEecCCCcEE-EeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCc-----ceEEEEe
Q 044877 32 NFQCFASTGDGSIV-VGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDT-----YLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~Ia-vGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~-----~L~L~dt 100 (244)
...+++.+++|.|+ +++.+|.|++||..+++ .+..+...+..|.+|++++||+.++++... .|.+||.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKE-IKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECT
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCc-EEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeC
Confidence 35789999999965 68889999999987654 333333456789999999999988887654 7888884
No 173
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.03 E-value=0.006 Score=52.61 Aligned_cols=61 Identities=18% Similarity=0.107 Sum_probs=46.7
Q ss_pred ecCCCcEEEeCCCCcEEEEeccccccceecCCCCC-CCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 38 STGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLG-SPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 38 ts~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglG-dPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
++|+.-|++||.++.|.+||..+++..-+ ++..+ ..+.++.++|||+.++ +..+.|..||.
T Consensus 2 ~~~~~~lv~~~~~~~v~~~d~~tG~~~w~-~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~ 63 (276)
T 3no2_A 2 SSPQHLLVGGSGWNKIAIINKDTKEIVWE-YPLEKGWECNSVAATKAGEILF-SYSKGAKMITR 63 (276)
T ss_dssp -CCCEEEEECTTCSEEEEEETTTTEEEEE-EECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT
T ss_pred CCCCcEEEeeCCCCEEEEEECCCCeEEEE-eCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC
Confidence 35665599999999999999977765543 44333 5789999999999877 56777888874
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.93 E-value=0.0043 Score=53.67 Aligned_cols=72 Identities=11% Similarity=0.047 Sum_probs=52.9
Q ss_pred CCCceeEEEecCCCcEEEe-CCC------------------------CcEEEEeccccccceecCCCCCCCeeEEEeCCC
Q 044877 29 RGTNFQCFASTGDGSIVVG-SLD------------------------GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYD 83 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavG-S~d------------------------G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~D 83 (244)
.-...+++|++++|.|+++ +.+ |.|.+||..+++..+..-.+.-....+|++++|
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 3455789999999995554 444 479999997666444333344457889999999
Q ss_pred CCEEEEeCC-cceEEEEe
Q 044877 84 GRWILGTTD-TYLILICT 100 (244)
Q Consensus 84 G~~lLaT~~-~~L~L~dt 100 (244)
|+.+++.+. ..|+.||.
T Consensus 102 g~l~v~d~~~~~v~~~~~ 119 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDP 119 (329)
T ss_dssp SCEEEEETTTTEEEEECT
T ss_pred CCEEEEECCCCEEEEEeC
Confidence 997777664 67999985
No 175
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.88 E-value=0.017 Score=48.32 Aligned_cols=66 Identities=12% Similarity=0.001 Sum_probs=49.4
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEecc-cccc---ceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSN-SMRQ---AKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~-~~r~---aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
-..++.+++|. +++.+.++.|++||.. .++. .+.+ ......+.+|++++||+..+++ .+.|.+||.
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~ 244 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGVHVLTP 244 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEEEEECT
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeEEEECC
Confidence 36899999998 6778889999999974 2221 2323 3344556789999999987777 778999984
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.81 E-value=0.0023 Score=61.82 Aligned_cols=70 Identities=13% Similarity=0.268 Sum_probs=54.8
Q ss_pred CCCceeEEEecCCCc-EEEeCCCCcEEEEecc--ccccceecCCCCCCCeeEEEeC----CCCCEEEEeCC--cceEEEE
Q 044877 29 RGTNFQCFASTGDGS-IVVGSLDGKIRLYSSN--SMRQAKTAFPGLGSPIRYVDVT----YDGRWILGTTD--TYLILIC 99 (244)
Q Consensus 29 ~~~~Ft~vats~~G~-IavGS~dG~IRLyD~~--~~r~aKt~lpglGdPI~~vdvS----~DG~~lLaT~~--~~L~L~d 99 (244)
.+....++++|++|. +++++.||.|.+||.. +.+...+ ++ .|.--.+|.+| |||+|+++++. +.+.+||
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~-i~-~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD 272 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAE-IK-IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMD 272 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEE-EE-CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEE
T ss_pred CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEE-Ee-cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEE
Confidence 444456899999997 8999999999999985 5554443 45 35556899999 69999998873 7799988
Q ss_pred e
Q 044877 100 T 100 (244)
Q Consensus 100 t 100 (244)
+
T Consensus 273 ~ 273 (567)
T 1qks_A 273 G 273 (567)
T ss_dssp T
T ss_pred C
Confidence 5
No 177
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.77 E-value=0.011 Score=51.00 Aligned_cols=66 Identities=14% Similarity=0.191 Sum_probs=48.9
Q ss_pred ceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEE
Q 044877 32 NFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILIC 99 (244)
Q Consensus 32 ~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~d 99 (244)
...+++.+++|+|++ +.++.|+.||. +++...+.-.+.+..+.++.+++||++|++.+. ..|..+|
T Consensus 38 ~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd 105 (276)
T 3no2_A 38 ECNSVAATKAGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVN 105 (276)
T ss_dssp CCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEEC
T ss_pred CCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEe
Confidence 467899999999777 66888999999 555444322223457899999999999998875 3455555
No 178
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.75 E-value=0.0012 Score=57.88 Aligned_cols=70 Identities=17% Similarity=0.026 Sum_probs=50.9
Q ss_pred ceeEEE-ecCCCc-EEEeCCCC------cEEEEecc-ccccce--ecCCCCCCCeeEEEeCC---CCCEEEEeCC--cce
Q 044877 32 NFQCFA-STGDGS-IVVGSLDG------KIRLYSSN-SMRQAK--TAFPGLGSPIRYVDVTY---DGRWILGTTD--TYL 95 (244)
Q Consensus 32 ~Ft~va-ts~~G~-IavGS~dG------~IRLyD~~-~~r~aK--t~lpglGdPI~~vdvS~---DG~~lLaT~~--~~L 95 (244)
...+++ ++|+|. |++++..+ .|++||.. +++..+ ..++..+..+.++++|| ||+||++++. +.|
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v 334 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWL 334 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeE
Confidence 356899 999997 77766533 79999974 333221 12445566778999999 8999998874 679
Q ss_pred EEEEee
Q 044877 96 ILICTL 101 (244)
Q Consensus 96 ~L~dt~ 101 (244)
.+|+..
T Consensus 335 ~v~~~~ 340 (365)
T 1jof_A 335 EIYRWK 340 (365)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999864
No 179
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.75 E-value=0.0045 Score=51.97 Aligned_cols=79 Identities=13% Similarity=0.006 Sum_probs=59.3
Q ss_pred cCCCceecccccccCCCCceeEEEecCCCc--EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 14 AGAPVLNWSQGHQFSRGTNFQCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 14 ~~~~~~~~~~~k~Y~~~~~Ft~vats~~G~--IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
.+..+..+.+...+ -.+++.+++|. ++++..+|.|..||..+. .+ .+...+..+.+|.+++||+.++++.
T Consensus 16 ~~~~~~~l~~~~~~-----~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~-~~~~~~~~~~~l~~~~dg~l~v~~~ 87 (296)
T 3e5z_A 16 AGAEARRLADGFTW-----TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LS-PEMHPSHHQNGHCLNKQGHLIACSH 87 (296)
T ss_dssp TTCCCEEEECCCSS-----EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EE-EEESSCSSEEEEEECTTCCEEEEET
T ss_pred CCCcEEEEecCCcc-----ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eE-EEECCCCCcceeeECCCCcEEEEec
Confidence 34445555544333 36899999998 788999999999998765 33 3444567899999999999887776
Q ss_pred C-cceEEEEe
Q 044877 92 D-TYLILICT 100 (244)
Q Consensus 92 ~-~~L~L~dt 100 (244)
. ..|.+||.
T Consensus 88 ~~~~i~~~d~ 97 (296)
T 3e5z_A 88 GLRRLERQRE 97 (296)
T ss_dssp TTTEEEEECS
T ss_pred CCCeEEEEcC
Confidence 5 67999985
No 180
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.72 E-value=0.007 Score=56.59 Aligned_cols=69 Identities=17% Similarity=0.113 Sum_probs=49.2
Q ss_pred CceeEEEecCCCc-EEEeCCC--------CcEEEEecc-cc--ccceecCCCCCCCeeEEEeCCCCCEEEEeCC-c--ce
Q 044877 31 TNFQCFASTGDGS-IVVGSLD--------GKIRLYSSN-SM--RQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-T--YL 95 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~d--------G~IRLyD~~-~~--r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~--~L 95 (244)
..+.+++.||+|. ||.++.+ ..|++||.. ++ ...+.+..++...+.++.+||||+.++++.. . .|
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l 267 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNL 267 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEE
Confidence 3467889999998 8877755 379999987 34 1344455666789999999999995545543 4 35
Q ss_pred EEEE
Q 044877 96 ILIC 99 (244)
Q Consensus 96 ~L~d 99 (244)
.+||
T Consensus 268 ~~~~ 271 (662)
T 3azo_A 268 HRVD 271 (662)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 5555
No 181
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.51 E-value=0.0079 Score=50.02 Aligned_cols=67 Identities=12% Similarity=0.097 Sum_probs=50.6
Q ss_pred eEEEecCCCcEEEe--------CCCCcEEEEeccccccceecC---CCCCCCeeEEEeCCC-CCEEEEeCCcceEEEEe
Q 044877 34 QCFASTGDGSIVVG--------SLDGKIRLYSSNSMRQAKTAF---PGLGSPIRYVDVTYD-GRWILGTTDTYLILICT 100 (244)
Q Consensus 34 t~vats~~G~IavG--------S~dG~IRLyD~~~~r~aKt~l---pglGdPI~~vdvS~D-G~~lLaT~~~~L~L~dt 100 (244)
.+++.+++|.|+++ +.+|.|..||..+++...... .+++..+.+|.+++| |+.++++..+.|..||.
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~ 99 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQT 99 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEET
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeC
Confidence 68899999997766 678999999976554322222 135577999999999 88777777678888885
No 182
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.47 E-value=0.02 Score=46.81 Aligned_cols=69 Identities=10% Similarity=0.113 Sum_probs=54.0
Q ss_pred CceeEEEecCCCcEEEeCC-CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 31 TNFQCFASTGDGSIVVGSL-DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~-dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
....+++.+++|.|.+++. +|.|..||.. ++.....++..+..+.+|.+++||+..+++. ...|..||.
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 4578999999999877776 7899999986 4333333455667899999999999888877 466888884
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.45 E-value=0.011 Score=49.09 Aligned_cols=68 Identities=7% Similarity=-0.018 Sum_probs=50.1
Q ss_pred eeEEEecCCCcEEEeC-CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEEee
Q 044877 33 FQCFASTGDGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~dt~ 101 (244)
-..++.+++|.|.++. .+|.|..||..+++... .++.....+.++.+++||++|.+++. +.|..|+..
T Consensus 228 p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKM-RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSE-EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeE-EEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 4678899999976665 67899999986444333 23333477999999999997766654 479888864
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.36 E-value=0.011 Score=56.72 Aligned_cols=69 Identities=16% Similarity=0.128 Sum_probs=51.0
Q ss_pred eeEEEecCCCc-EEEeCCCCc----------------EEEEeccccccc-eecCCC--CCCCeeEEEeCCCCCEEEEeC-
Q 044877 33 FQCFASTGDGS-IVVGSLDGK----------------IRLYSSNSMRQA-KTAFPG--LGSPIRYVDVTYDGRWILGTT- 91 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~----------------IRLyD~~~~r~a-Kt~lpg--lGdPI~~vdvS~DG~~lLaT~- 91 (244)
+.+++.+|+|. |+.++.++. |++|+..+.... +..+.+ ....+.++.+||||+||+.++
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 67899999997 999988876 999998665321 222232 334588999999999999765
Q ss_pred -----CcceEEEEee
Q 044877 92 -----DTYLILICTL 101 (244)
Q Consensus 92 -----~~~L~L~dt~ 101 (244)
.+.|.+||..
T Consensus 253 ~~~~~~~~l~~~d~~ 267 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQ 267 (710)
T ss_dssp CSSSSCCEEEEEEGG
T ss_pred ccCCCccEEEEEECc
Confidence 2458888863
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.36 E-value=0.062 Score=46.61 Aligned_cols=67 Identities=6% Similarity=-0.124 Sum_probs=50.8
Q ss_pred eeEEEecCCCcEEEeCCC-----------CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 33 FQCFASTGDGSIVVGSLD-----------GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~IavGS~d-----------G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
-..++.+++|.+++++.. +.|..||..+.+..++.--+.|....+|+++|||++|.++.. .|..||.
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~ 251 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPV 251 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEET
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEEC
Confidence 367889999997766653 689999997766444321123668899999999999987766 7888886
No 186
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.27 E-value=0.0062 Score=51.59 Aligned_cols=57 Identities=19% Similarity=0.163 Sum_probs=41.3
Q ss_pred ceeEEEecCCCc-EEEeCCC---Cc--EEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 32 NFQCFASTGDGS-IVVGSLD---GK--IRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~d---G~--IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
...+++.+|+|. ||..+.+ |. |.+||..+++ .+.+.. .+. +.++.+||||++|+.++
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~-~~~l~~-~~~-~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS-SKKILE-AKN-IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE-EEEEEE-ESE-EEEEEECTTSSEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc-eEEEEc-CCC-ccceeECCCCCEEEEEE
Confidence 356899999997 8877764 33 7777876654 332333 333 99999999999998775
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.24 E-value=0.0051 Score=52.49 Aligned_cols=67 Identities=19% Similarity=0.143 Sum_probs=46.3
Q ss_pred eeEEEecCCCc-EEEeCC-CC--cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSL-DG--KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~-dG--~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
+.+++++|+|. ||..+. +| .|.+||..+++ .+.+..+.+..+..+.+||||++|+.++. ..|.+||.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDL 109 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEEC
Confidence 67889999998 665544 34 68888987664 33233333333444789999999987764 56999985
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.24 E-value=0.088 Score=44.36 Aligned_cols=62 Identities=18% Similarity=0.138 Sum_probs=45.4
Q ss_pred CCceeEEEecCCCcEEEeCC-C----CcEEEEeccccccceecCC--CCCCCeeEEEeCCCCCEEEEeCC
Q 044877 30 GTNFQCFASTGDGSIVVGSL-D----GKIRLYSSNSMRQAKTAFP--GLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~-d----G~IRLyD~~~~r~aKt~lp--glGdPI~~vdvS~DG~~lLaT~~ 92 (244)
.....+++.+++|.+.+++. + +.|.+||..+.+ .+..+. ..+..+.+|.++|||+.++++..
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 34578999999999666554 4 589999987654 222222 35678999999999998887763
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.17 E-value=0.02 Score=46.55 Aligned_cols=67 Identities=12% Similarity=0.141 Sum_probs=47.3
Q ss_pred ceeEEEecCCCcEEE-e-CCCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 32 NFQCFASTGDGSIVV-G-SLDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~Iav-G-S~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.-.+++.+++|.|++ + +.+|.|+.||..+.. .. .++ .....+.+|++++||+.+++.....|..||.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~-~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTG-TT-VLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAA 94 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------E-ECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcc-cc-eEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeC
Confidence 446899999999777 6 678999999985543 22 232 2225678999999999766666667999884
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.14 E-value=0.1 Score=44.96 Aligned_cols=67 Identities=10% Similarity=-0.010 Sum_probs=47.9
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccc-cceecC--------CCCCCCeeEEEeCC-CCCEEEEeC--CcceEEEE
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMR-QAKTAF--------PGLGSPIRYVDVTY-DGRWILGTT--DTYLILIC 99 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r-~aKt~l--------pglGdPI~~vdvS~-DG~~lLaT~--~~~L~L~d 99 (244)
-..+|++++|. +++.+.++.|+.||..+.. ...++- ++.-....+|+++| +|+.+++.+ ...|++||
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~ 172 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS 172 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc
Confidence 46899999999 5666778999999985431 122211 11122578999999 899888885 47799998
No 191
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=95.95 E-value=0.01 Score=55.26 Aligned_cols=58 Identities=12% Similarity=0.039 Sum_probs=47.6
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEecccccc--ceecCC---------CCCCCeeEEEeCCCCCEEEE
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQ--AKTAFP---------GLGSPIRYVDVTYDGRWILG 89 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~--aKt~lp---------glGdPI~~vdvS~DG~~lLa 89 (244)
...++|++.|++| +++|..||.|++|+..+... .++ +| ++...|.+|...++++|+++
T Consensus 162 ~~~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~~~~~k~~-I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 162 AQNVTSFDVTNSQ-LAVLLKDRSFQSFAWRNGEMEKQFE-FSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EESEEEEEECSSE-EEEEETTSCEEEEEEETTEEEEEEE-ECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cCCceEEEEcCCc-eEEEEcCCcEEEEcCCCccccccce-ecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 3479999999999 89999999999998876653 333 42 24678999999999999986
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.91 E-value=0.016 Score=55.63 Aligned_cols=69 Identities=13% Similarity=0.094 Sum_probs=50.4
Q ss_pred CceeEEEecCCCc-EEEeCCCCc-------------EEEEecccccc-ceecC--CCCCCCeeEEEeCCCCCEEEEeC-C
Q 044877 31 TNFQCFASTGDGS-IVVGSLDGK-------------IRLYSSNSMRQ-AKTAF--PGLGSPIRYVDVTYDGRWILGTT-D 92 (244)
Q Consensus 31 ~~Ft~vats~~G~-IavGS~dG~-------------IRLyD~~~~r~-aKt~l--pglGdPI~~vdvS~DG~~lLaT~-~ 92 (244)
.+|.+++.+++|. |+.++.|.. |++|+..+... .+..+ ++....+.++.+||||++|+.++ +
T Consensus 168 ~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 247 (695)
T 2bkl_A 168 GKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILR 247 (695)
T ss_dssp CTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEE
T ss_pred ccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeC
Confidence 3458899999998 888888876 99999866532 12222 33345789999999999999776 3
Q ss_pred c----ceEEEE
Q 044877 93 T----YLILIC 99 (244)
Q Consensus 93 ~----~L~L~d 99 (244)
. .|.+||
T Consensus 248 ~~~~~~l~~~~ 258 (695)
T 2bkl_A 248 GWSENDVYWKR 258 (695)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCceEEEEEc
Confidence 3 476765
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.88 E-value=0.047 Score=44.37 Aligned_cols=69 Identities=16% Similarity=0.122 Sum_probs=50.3
Q ss_pred CceeEEEecCCCcEEEeC-CCCcEEEEeccccccceecCCCCC-CCeeEEEeCCCCCEEEEeCC-cceEEEEee
Q 044877 31 TNFQCFASTGDGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLG-SPIRYVDVTYDGRWILGTTD-TYLILICTL 101 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglG-dPI~~vdvS~DG~~lLaT~~-~~L~L~dt~ 101 (244)
..-.+++.+++|.|.++. .++.|+.||..+..... ++..+ ..+.+|++++||+.+++... +.|++++..
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 345789999999976665 57899999986543222 33222 56899999999997777664 679998864
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.88 E-value=0.064 Score=43.70 Aligned_cols=68 Identities=6% Similarity=-0.133 Sum_probs=52.3
Q ss_pred CceeEEEecCCCcEEEeC-CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 31 TNFQCFASTGDGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
....+++.+++|.|.+++ .++.|..||.. ++.....+++.+..+.+|.+ +||+..+++..+.|..+|.
T Consensus 225 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~ 293 (299)
T 2z2n_A 225 ARPHAITAGAGIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTL 293 (299)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEE
T ss_pred CCceeEEECCCCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEc
Confidence 446789999999987776 67899999983 33233335666778999999 9999998887777777774
No 195
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.81 E-value=0.015 Score=49.93 Aligned_cols=68 Identities=9% Similarity=0.002 Sum_probs=47.3
Q ss_pred ceeEEEecC-CCc-EEEeCCCC------cEEEEeccccccceecCCCC-CCCeeEEEeCCCCCEEEEeCC---c---ceE
Q 044877 32 NFQCFASTG-DGS-IVVGSLDG------KIRLYSSNSMRQAKTAFPGL-GSPIRYVDVTYDGRWILGTTD---T---YLI 96 (244)
Q Consensus 32 ~Ft~vats~-~G~-IavGS~dG------~IRLyD~~~~r~aKt~lpgl-GdPI~~vdvS~DG~~lLaT~~---~---~L~ 96 (244)
.+..++.+| +|. ||..+..+ .|.++|..+. ..+.+.+.. +.++.++.+||||++|+..+. . .|.
T Consensus 189 ~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 189 WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEE
Confidence 367899999 997 77766543 7888887554 344344433 247899999999999875542 1 388
Q ss_pred EEEe
Q 044877 97 LICT 100 (244)
Q Consensus 97 L~dt 100 (244)
+||.
T Consensus 268 ~~d~ 271 (388)
T 3pe7_A 268 SADP 271 (388)
T ss_dssp EECT
T ss_pred EEec
Confidence 8886
No 196
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.79 E-value=0.059 Score=43.93 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=53.3
Q ss_pred CceeEEEecCCCcEEEeCC-CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 31 TNFQCFASTGDGSIVVGSL-DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~-dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
....+++.+++|.|.++.. +|.|..||.. ++.....+|..+..+.+|.+.+||+..+++. ...|..+|.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 132 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTA 132 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECC
Confidence 4568899999999777765 7889999986 4333334565668899999999999888877 467888874
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.77 E-value=0.023 Score=51.38 Aligned_cols=65 Identities=12% Similarity=0.073 Sum_probs=47.2
Q ss_pred EEEecCCCc-EEEeC----------CCCcEEEEeccccccceec-CCC-----CCCCeeEEEeCCCCCEEEEeCC---cc
Q 044877 35 CFASTGDGS-IVVGS----------LDGKIRLYSSNSMRQAKTA-FPG-----LGSPIRYVDVTYDGRWILGTTD---TY 94 (244)
Q Consensus 35 ~vats~~G~-IavGS----------~dG~IRLyD~~~~r~aKt~-lpg-----lGdPI~~vdvS~DG~~lLaT~~---~~ 94 (244)
.++.||+|. +++.+ .++.|.+||..+.+...+. +++ .|..-.++.+||||+||++++. +.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999997 88876 3678999999765533321 221 1233458999999999997762 56
Q ss_pred eEEEE
Q 044877 95 LILIC 99 (244)
Q Consensus 95 L~L~d 99 (244)
|.++|
T Consensus 150 v~viD 154 (373)
T 2mad_H 150 VGLVV 154 (373)
T ss_pred EEEEE
Confidence 99998
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=95.68 E-value=0.01 Score=55.37 Aligned_cols=67 Identities=16% Similarity=0.177 Sum_probs=50.5
Q ss_pred EEEecCCCc-EEEeC----------CCCcEEEEeccccccceec-CCC-----CCCCeeEEEeCCCCCEEEEeC---Ccc
Q 044877 35 CFASTGDGS-IVVGS----------LDGKIRLYSSNSMRQAKTA-FPG-----LGSPIRYVDVTYDGRWILGTT---DTY 94 (244)
Q Consensus 35 ~vats~~G~-IavGS----------~dG~IRLyD~~~~r~aKt~-lpg-----lGdPI~~vdvS~DG~~lLaT~---~~~ 94 (244)
.++.+|+|. +++++ .++.|.+||..+.+..++. +|+ .|..-.++.+||||+||.+++ .+.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 499999998 77776 3678999999887655432 221 244566899999999998765 367
Q ss_pred eEEEEee
Q 044877 95 LILICTL 101 (244)
Q Consensus 95 L~L~dt~ 101 (244)
|.+||+.
T Consensus 162 VsVID~~ 168 (386)
T 3sjl_D 162 VGVVDLE 168 (386)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999974
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=95.63 E-value=0.029 Score=50.69 Aligned_cols=65 Identities=12% Similarity=0.081 Sum_probs=49.7
Q ss_pred EEEecCCCc-EEEeCC----------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCC-EEEEeC--CcceEEEEe
Q 044877 35 CFASTGDGS-IVVGSL----------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGR-WILGTT--DTYLILICT 100 (244)
Q Consensus 35 ~vats~~G~-IavGS~----------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~-~lLaT~--~~~L~L~dt 100 (244)
.++++++|. ++++.. .+.|-++|..+.+..++ +| +|....+|.+||||+ .++++. .+.|.+||+
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~-i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQ-IS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEE-EE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEEC
Confidence 377888876 777653 36899999988776564 55 777889999999999 455554 478999997
Q ss_pred e
Q 044877 101 L 101 (244)
Q Consensus 101 ~ 101 (244)
.
T Consensus 349 ~ 349 (373)
T 2mad_H 349 G 349 (373)
T ss_pred C
Confidence 4
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.45 E-value=0.022 Score=48.53 Aligned_cols=69 Identities=9% Similarity=-0.071 Sum_probs=47.5
Q ss_pred CceeEEEecC-CCc-EEEeCCC------CcEEEEeccccccceecCCCC-CCCeeEEEeCCCCCEEEEeC-C-----cce
Q 044877 31 TNFQCFASTG-DGS-IVVGSLD------GKIRLYSSNSMRQAKTAFPGL-GSPIRYVDVTYDGRWILGTT-D-----TYL 95 (244)
Q Consensus 31 ~~Ft~vats~-~G~-IavGS~d------G~IRLyD~~~~r~aKt~lpgl-GdPI~~vdvS~DG~~lLaT~-~-----~~L 95 (244)
..+..++++| +|. ||..+.+ ..|.+||..+.+ .+.+.+.. +..+.++.+||||++|+..+ . ..|
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVI 266 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceE
Confidence 3467889999 776 7776654 358888875543 44444422 34688899999999987664 2 338
Q ss_pred EEEEe
Q 044877 96 ILICT 100 (244)
Q Consensus 96 ~L~dt 100 (244)
.+||.
T Consensus 267 ~~~d~ 271 (396)
T 3c5m_A 267 YKANP 271 (396)
T ss_dssp EEECT
T ss_pred EEEEC
Confidence 88885
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.44 E-value=0.096 Score=42.66 Aligned_cols=70 Identities=13% Similarity=0.081 Sum_probs=52.9
Q ss_pred CCceeEEEecCCCcEEEeC-CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 30 GTNFQCFASTGDGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
.....+++.+++|.|.++. .+|.|..||.. ++.....+|.....+.+|.+.+||+..+++. ...|..+|.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 3456799999999977776 57999999986 4333333454456789999999999888876 466888874
No 202
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=95.42 E-value=0.0072 Score=55.55 Aligned_cols=66 Identities=11% Similarity=0.118 Sum_probs=50.4
Q ss_pred EEEecCCCc-EEEeC----------CCCcEEEEeccccccceec-CCC-----CCCCeeEEEeCCCCCEEEEeC---Ccc
Q 044877 35 CFASTGDGS-IVVGS----------LDGKIRLYSSNSMRQAKTA-FPG-----LGSPIRYVDVTYDGRWILGTT---DTY 94 (244)
Q Consensus 35 ~vats~~G~-IavGS----------~dG~IRLyD~~~~r~aKt~-lpg-----lGdPI~~vdvS~DG~~lLaT~---~~~ 94 (244)
.++.+++|. +++++ .++.|.+||..+.+..++. +|+ .|..-.++.+||||+|+..+. .+.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 899999997 88886 4788999999988766643 221 124457999999999999775 256
Q ss_pred eEE--EEe
Q 044877 95 LIL--ICT 100 (244)
Q Consensus 95 L~L--~dt 100 (244)
|.+ ||+
T Consensus 149 v~V~~iD~ 156 (368)
T 1mda_H 149 AGLSVPGA 156 (368)
T ss_dssp EEEEETTT
T ss_pred EEEEEEch
Confidence 888 887
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.42 E-value=0.15 Score=49.33 Aligned_cols=57 Identities=11% Similarity=0.155 Sum_probs=40.4
Q ss_pred ceeEEEecCCCc-EEEeCCC-C----cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 32 NFQCFASTGDGS-IVVGSLD-G----KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~d-G----~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
.+.+++.||+|. ||.++.+ | .|++||..+++.....++ +..+.++++||| ++|+.+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~--~~~~~~~~wspD-~~l~~~~ 226 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK--WVKFSGLAWLGN-DALLYSR 226 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE--EEESCCCEESTT-SEEEEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC--CceeccEEEECC-CEEEEEE
Confidence 578999999998 7766554 4 599999987653332222 112367899999 9998665
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.92 E-value=0.075 Score=45.17 Aligned_cols=62 Identities=13% Similarity=0.150 Sum_probs=46.3
Q ss_pred eEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEE
Q 044877 34 QCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILIC 99 (244)
Q Consensus 34 t~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~d 99 (244)
..++.+++|.|.+++.+| |.+||..+....+..+| ..+.++++++|++.|..++.+.|.-++
T Consensus 242 dgi~~d~~G~lwv~~~~g-v~~~~~~g~~~~~~~~~---~~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSSGTG-VCVFDSDGQLLGHIPTP---GTASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp CSEEECTTSCEEECCSSE-EEEECTTSCEEEEEECS---SCCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred CeEEECCCCCEEEecCCc-EEEECCCCCEEEEEECC---CceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 468899999999999766 99999854433333334 358999999999999888877665444
No 205
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=94.73 E-value=0.051 Score=52.46 Aligned_cols=61 Identities=13% Similarity=0.130 Sum_probs=48.8
Q ss_pred ecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 38 STGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 38 ts~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
.++.+. +++.+.+|.|.++|..+++... .++ .|....++.+||||+++.+++. ..|.+||+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~-~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~ 225 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKT-VLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDL 225 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEE-EEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEE-EEe-CCCCccceEECCCCCEEEEEcCCCeEEEEEC
Confidence 334444 6788889999999998776554 355 7878889999999999998875 68999997
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.67 E-value=0.34 Score=40.96 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=43.3
Q ss_pred CceeEEEecCCCcEEEeCC------------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-CC-cceE
Q 044877 31 TNFQCFASTGDGSIVVGSL------------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-TD-TYLI 96 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~------------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~~-~~L~ 96 (244)
+.+..++++++|.|.+|+. .|.|..+|.. ++ .....+++. ...+|+++|||++|..+ +. +.|.
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~-~~~~~~~~~-~pngi~~spdg~~lyv~~~~~~~i~ 174 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HH-VKKYFDQVD-ISNGLDWSLDHKIFYYIDSLSYSVD 174 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SC-EEEEEEEES-BEEEEEECTTSCEEEEEEGGGTEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CC-EEEEeeccc-cccceEEcCCCCEEEEecCCCCcEE
Confidence 4478899999999888763 2334444432 22 222333333 34799999999987644 43 6688
Q ss_pred EEEe
Q 044877 97 LICT 100 (244)
Q Consensus 97 L~dt 100 (244)
.||.
T Consensus 175 ~~~~ 178 (297)
T 3g4e_A 175 AFDY 178 (297)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8885
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=94.66 E-value=0.024 Score=53.36 Aligned_cols=67 Identities=13% Similarity=0.118 Sum_probs=51.4
Q ss_pred EEEecCCCc-EEEeC----------CCCcEEEEeccccccceec-CCC-----CCCCeeEEEeCCCCCEEEEeC---Ccc
Q 044877 35 CFASTGDGS-IVVGS----------LDGKIRLYSSNSMRQAKTA-FPG-----LGSPIRYVDVTYDGRWILGTT---DTY 94 (244)
Q Consensus 35 ~vats~~G~-IavGS----------~dG~IRLyD~~~~r~aKt~-lpg-----lGdPI~~vdvS~DG~~lLaT~---~~~ 94 (244)
.++.|++|. +++++ .++.|.++|..+.+..++. +++ .|..-.++.+||||+||.++. .+.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 899999998 88887 4788999999887655532 231 244567899999999999764 367
Q ss_pred eEEEEee
Q 044877 95 LILICTL 101 (244)
Q Consensus 95 L~L~dt~ 101 (244)
|.++|+.
T Consensus 202 VsVID~~ 208 (426)
T 3c75_H 202 VGVVDLE 208 (426)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999974
No 208
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=94.27 E-value=0.042 Score=50.44 Aligned_cols=64 Identities=9% Similarity=0.001 Sum_probs=48.2
Q ss_pred EEecCCCc-EEEeCC-C--------CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC---CcceEEEEee
Q 044877 36 FASTGDGS-IVVGSL-D--------GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT---DTYLILICTL 101 (244)
Q Consensus 36 vats~~G~-IavGS~-d--------G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~---~~~L~L~dt~ 101 (244)
++++++|. ++++.. . +.+-++|..+.+..+ .+| +|....+|.+||||++++.++ .+.|.+||+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~-~i~-vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSG-PIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEE-CCE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEE-EEE-CCCCcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 78999876 776543 2 345599998877665 466 777899999999999766554 3779999974
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.90 E-value=0.15 Score=49.39 Aligned_cols=69 Identities=16% Similarity=0.239 Sum_probs=48.1
Q ss_pred eeEEEecCCCcEEEeCCCCc--------------EEEEecccccc-ceecCCCCCC--CeeEEEeCCCCCEEEEeCC---
Q 044877 33 FQCFASTGDGSIVVGSLDGK--------------IRLYSSNSMRQ-AKTAFPGLGS--PIRYVDVTYDGRWILGTTD--- 92 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~--------------IRLyD~~~~r~-aKt~lpglGd--PI~~vdvS~DG~~lLaT~~--- 92 (244)
|..++.+++..|+.++.++. |++|+..+... ....+..-++ .+.++.+||||+||+.++.
T Consensus 211 ~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 211 FSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp SCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred eccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 46788999933888887765 89999865432 2223333333 4899999999999997652
Q ss_pred ---cceEEEEee
Q 044877 93 ---TYLILICTL 101 (244)
Q Consensus 93 ---~~L~L~dt~ 101 (244)
+.|.+||..
T Consensus 291 ~~~~~l~~~d~~ 302 (741)
T 1yr2_A 291 DPVNTVHVARVT 302 (741)
T ss_dssp CSCCEEEEEEEE
T ss_pred CCcceEEEEECC
Confidence 258888863
No 210
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.73 E-value=2.9 Score=40.41 Aligned_cols=70 Identities=16% Similarity=0.190 Sum_probs=51.0
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEecccccccee-cCC---CCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKT-AFP---GLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt-~lp---glGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
...+.+++.+++|.|.+|+..| |..||..+.+.... ..+ .....|.+|...++|+..++|....|..+|.
T Consensus 449 ~~~v~~i~~d~~g~lwigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~ 522 (781)
T 3v9f_A 449 LLDVRVFYEDKNKKIWIGTHAG-VFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTP 522 (781)
T ss_dssp CCCEEEEEECTTSEEEEEETTE-EEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECT
T ss_pred CCeEEEEEECCCCCEEEEECCc-eEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeC
Confidence 4568899999999999998855 67788755432111 111 1257899999999999888888677877774
No 211
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=93.70 E-value=0.33 Score=48.00 Aligned_cols=49 Identities=4% Similarity=0.064 Sum_probs=36.1
Q ss_pred cEEEEeccc--cccceecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEEee
Q 044877 52 KIRLYSSNS--MRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILICTL 101 (244)
Q Consensus 52 ~IRLyD~~~--~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~dt~ 101 (244)
.|.+.|..+ .+.....+| .|..-.+|.+||||+|++++.. +.+.++|+.
T Consensus 255 ~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~ 307 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT 307 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGG
T ss_pred cEEEEeCcccCCceeEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECc
Confidence 477888765 222011345 6777789999999999999985 779999975
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=93.64 E-value=0.21 Score=48.10 Aligned_cols=58 Identities=14% Similarity=0.139 Sum_probs=41.1
Q ss_pred ceeEEEecCCCc-EE-----EeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC
Q 044877 32 NFQCFASTGDGS-IV-----VGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 32 ~Ft~vats~~G~-Ia-----vGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~ 92 (244)
.+..++.||+|. || .|+.+-.||+||..+++.....+++. ...++++| ||+.|+-++.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~ 193 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSY 193 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEES
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEe
Confidence 578889999998 66 35556789999998776433333322 13567899 9999986653
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=93.53 E-value=0.13 Score=47.69 Aligned_cols=64 Identities=6% Similarity=0.084 Sum_probs=48.7
Q ss_pred eeEEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 33 FQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
.+++++ +|. +++| .+|.|++||.....+.+ .++.+..+|.++...+.. .++++.+..|.+||..
T Consensus 90 V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 90 VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-TVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLR 154 (388)
T ss_dssp EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-EEEECSSCEEEEEECSSE-EEEEETTSEEEEEETT
T ss_pred eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-ccceeecceeeEEecCCC-EEEEECCCCEEEEEcc
Confidence 788999 555 8888 88999999987655444 456778889888777653 6667778889999863
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=93.52 E-value=0.19 Score=45.73 Aligned_cols=65 Identities=18% Similarity=0.216 Sum_probs=47.0
Q ss_pred eeEEEecCCCcEEE-eCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-c--ceEEEEe
Q 044877 33 FQCFASTGDGSIVV-GSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-T--YLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~Iav-GS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~--~L~L~dt 100 (244)
-..++++++|.|++ ...++.||.||..+++ ..+.+.. +.... +++++||++|+++.. . .|..+|.
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNK-VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTE-EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCE-EEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 46899999999554 4556899999987654 4444444 33333 999999999988875 3 5777775
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.28 E-value=0.41 Score=40.49 Aligned_cols=63 Identities=13% Similarity=0.146 Sum_probs=46.7
Q ss_pred eEEEecC-CCc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 34 QCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 34 t~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+.+.++ +|. +++....+.|..||..+.+. . .+ .++..+.+|.+++||++++++ .+.|.+||.
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~-~~-~~~~~~~~i~~~~dG~l~v~~-~~~l~~~d~ 80 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-Q-RV-TMDAPVSSVALRQSGGYVATI-GTKFCALNW 80 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-E-EE-ECSSCEEEEEEBTTSSEEEEE-TTEEEEEET
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-E-EE-eCCCceEEEEECCCCCEEEEE-CCeEEEEEC
Confidence 4667777 455 67777889999999876542 2 22 256789999999999977665 677888884
No 216
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.28 E-value=4 Score=39.55 Aligned_cols=68 Identities=13% Similarity=0.177 Sum_probs=50.6
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCC-----CC-CCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFP-----GL-GSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lp-----gl-GdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
...+.+++.+++|.|-+|+..| |..||..+.+... ... ++ ...|.+|...++|+..++|. ..|..||.
T Consensus 451 ~~~v~~i~~d~~g~lwigt~~G-l~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~ 524 (795)
T 4a2l_A 451 NENVYAILPDGEGNLWLGTLSA-LVRFNPEQRSFTT-IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQ 524 (795)
T ss_dssp CSCEEEEEECSSSCEEEEESSC-EEEEETTTTEEEE-CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEE
T ss_pred CCeeEEEEECCCCCEEEEecCc-eeEEeCCCCeEEE-ccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeC
Confidence 3467899999999999998865 6778876543221 111 22 36899999999999888887 78888885
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=93.24 E-value=0.26 Score=42.62 Aligned_cols=60 Identities=20% Similarity=0.168 Sum_probs=41.9
Q ss_pred CceeEEEecCCCcEEEeCCCCcEEEEeccccccceec-CC-CC-CCCeeEEEeCCCCCEEEEeC
Q 044877 31 TNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTA-FP-GL-GSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 31 ~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~-lp-gl-GdPI~~vdvS~DG~~lLaT~ 91 (244)
....+++.+++|.+++++.+| |.+||..+++..... .+ +. ...+.++.++|||+.++++.
T Consensus 90 ~~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASDDG-LFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp SCEEEEEEEETTEEEEEETTE-EEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CcceEEEEeCCCeEEEEECCC-EEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 457889999999988887666 999998655422211 11 11 23588999999999877664
No 218
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.95 E-value=0.31 Score=42.13 Aligned_cols=67 Identities=6% Similarity=-0.124 Sum_probs=46.2
Q ss_pred ceeEEEecCCCc-EEEeCCCCcEEEEecccccccee-cCCCCCCCeeEEEeCCCCCEEE-Ee----C-CcceEEEEe
Q 044877 32 NFQCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKT-AFPGLGSPIRYVDVTYDGRWIL-GT----T-DTYLILICT 100 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt-~lpglGdPI~~vdvS~DG~~lL-aT----~-~~~L~L~dt 100 (244)
.-..++++++|. +++.+. .|..||..+++...+ .++..+....+|+++||+.+|. +. . .+.|.+||.
T Consensus 226 ~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp CCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred CceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 347899999776 777765 999999976653222 2333257789999999555554 54 3 366999985
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=92.91 E-value=0.087 Score=49.08 Aligned_cols=63 Identities=17% Similarity=0.134 Sum_probs=47.0
Q ss_pred EEecCCCc-EEEeCC-----CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-----------CcceEEE
Q 044877 36 FASTGDGS-IVVGSL-----DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-----------DTYLILI 98 (244)
Q Consensus 36 vats~~G~-IavGS~-----dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-----------~~~L~L~ 98 (244)
++..|+|+ +++.+. +|.|-++|..+.+... .+|.-..| +|.+||||++|.+++ .++|.+|
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~-~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-MIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-EEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEE-EEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 45567887 777766 6899999998876554 45633346 699999999997665 3679999
Q ss_pred Eee
Q 044877 99 CTL 101 (244)
Q Consensus 99 dt~ 101 (244)
|+.
T Consensus 115 D~~ 117 (386)
T 3sjl_D 115 DPV 117 (386)
T ss_dssp CTT
T ss_pred ECC
Confidence 973
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.87 E-value=0.26 Score=42.60 Aligned_cols=63 Identities=16% Similarity=0.055 Sum_probs=47.5
Q ss_pred eEEEecCC-Cc-EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 34 QCFASTGD-GS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 34 t~vats~~-G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+.+.+++ +. ++++..+|.|..||..+++... ++ +...|.+|.+++||++++++ ...|.+||.
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~--~~-~~~~v~~i~~~~dg~l~v~~-~~gl~~~d~ 116 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV--HA-LPFMGSALAKISDSKQLIAS-DDGLFLRDT 116 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE--EE-CSSCEEEEEEEETTEEEEEE-TTEEEEEET
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE--EE-CCCcceEEEEeCCCeEEEEE-CCCEEEEEC
Confidence 67888886 45 6778889999999987654222 22 35689999999999988776 556888884
No 221
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=92.75 E-value=0.063 Score=50.42 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=50.5
Q ss_pred EEecCCCc-EEEeCC----------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCC-EEEEeC--CcceEEEEee
Q 044877 36 FASTGDGS-IVVGSL----------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGR-WILGTT--DTYLILICTL 101 (244)
Q Consensus 36 vats~~G~-IavGS~----------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~-~lLaT~--~~~L~L~dt~ 101 (244)
++++++|. +++... .+.|-++|..+.+..++ +| +|..-.+|.+||||+ .+++++ .+.|.+||+.
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~-I~-vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINK-IE-LGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE-EE-EEEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEE-EE-CCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 68888876 666542 35799999998876664 56 777899999999999 777776 4789999974
No 222
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.44 E-value=0.48 Score=40.43 Aligned_cols=74 Identities=16% Similarity=0.179 Sum_probs=50.6
Q ss_pred cccccCCCCceeEEEecCCCcEEEeC-CCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cc--eEEE
Q 044877 23 QGHQFSRGTNFQCFASTGDGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TY--LILI 98 (244)
Q Consensus 23 ~~k~Y~~~~~Ft~vats~~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~--L~L~ 98 (244)
...++....--..++.+++|.|++.+ ..|.|..||..+. ....++ .+....+|++++||+.++|... +. |..+
T Consensus 24 ~~~~~p~~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~--~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~ 100 (306)
T 2p4o_A 24 IITSFPVNTFLENLASAPDGTIFVTNHEVGEIVSITPDGN--QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSL 100 (306)
T ss_dssp EEEEECTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCC--EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred EeEeCCCCCCcceEEECCCCCEEEEeCCCCeEEEECCCCc--eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEE
Confidence 33445444556799999999977765 7899999998543 222232 4567899999999997766643 23 5444
Q ss_pred E
Q 044877 99 C 99 (244)
Q Consensus 99 d 99 (244)
|
T Consensus 101 d 101 (306)
T 2p4o_A 101 V 101 (306)
T ss_dssp E
T ss_pred c
Confidence 5
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=92.34 E-value=0.21 Score=48.13 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=46.5
Q ss_pred eeEEEecCCCc-EEEeCCCCc-------------EEEEecccccc-ceecCCCC---CCCeeEEEeCCCCCEEEEeCC--
Q 044877 33 FQCFASTGDGS-IVVGSLDGK-------------IRLYSSNSMRQ-AKTAFPGL---GSPIRYVDVTYDGRWILGTTD-- 92 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~dG~-------------IRLyD~~~~r~-aKt~lpgl---GdPI~~vdvS~DG~~lLaT~~-- 92 (244)
+.+++.+ +|. |+.++.++. |++|+.-+... ....+..- ..-+.++.+||||+||+.+..
T Consensus 177 ~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 177 FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS 255 (693)
T ss_dssp SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS
T ss_pred eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC
Confidence 5678888 887 888888854 99999865432 23233322 234689999999999986532
Q ss_pred ---cceEEEEe
Q 044877 93 ---TYLILICT 100 (244)
Q Consensus 93 ---~~L~L~dt 100 (244)
+.|.++|.
T Consensus 256 ~~~~~i~~~d~ 266 (693)
T 3iuj_A 256 TSGNRLYVKDL 266 (693)
T ss_dssp SSCCEEEEEET
T ss_pred CCCcEEEEEEC
Confidence 35888885
No 224
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.23 E-value=7.3 Score=37.73 Aligned_cols=72 Identities=21% Similarity=0.346 Sum_probs=53.9
Q ss_pred CCCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCC------CC-CCCeeEEEeCCCCC-EEEEeCCcceEEEEe
Q 044877 29 RGTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFP------GL-GSPIRYVDVTYDGR-WILGTTDTYLILICT 100 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lp------gl-GdPI~~vdvS~DG~-~lLaT~~~~L~L~dt 100 (244)
..+.+.|++.+++|.|-+|+.+|-|..||..+.+......+ ++ ...|.+|...++|+ ..++|....|.++|.
T Consensus 355 ~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 355 SDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp SCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 35568999999999999999998899999865432221111 12 46799999999999 566777788999884
No 225
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.63 E-value=0.45 Score=43.18 Aligned_cols=69 Identities=10% Similarity=0.192 Sum_probs=46.7
Q ss_pred CceeEEEecC-CCcEEEeCCCCcEEEEeccccccceec----CCC-CCC-CeeEEEeCCC-CCEEEEeCC-cceEEEEe
Q 044877 31 TNFQCFASTG-DGSIVVGSLDGKIRLYSSNSMRQAKTA----FPG-LGS-PIRYVDVTYD-GRWILGTTD-TYLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~-~G~IavGS~dG~IRLyD~~~~r~aKt~----lpg-lGd-PI~~vdvS~D-G~~lLaT~~-~~L~L~dt 100 (244)
....++++++ +|.|++...+|.|+.||..+.. .... ..+ .+. |..+|+++|+ |..+++.+. ..|+.|+.
T Consensus 219 ~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 219 GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp SCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 3357899999 8889888889999999986543 2222 222 221 3349999996 544445554 66888874
No 226
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.58 E-value=0.41 Score=40.24 Aligned_cols=57 Identities=11% Similarity=0.076 Sum_probs=40.9
Q ss_pred cCCCc-EEEeCCC--------CcEEEEeccccccceecCCCCCCCeeE-EEeCCCCCEEEEeC-CcceEEEEee
Q 044877 39 TGDGS-IVVGSLD--------GKIRLYSSNSMRQAKTAFPGLGSPIRY-VDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 39 s~~G~-IavGS~d--------G~IRLyD~~~~r~aKt~lpglGdPI~~-vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
+|+|. ||.++.+ +.|.+|| +++ .+.+++++..+|.+ +.++ || .+++.+ +..++|| ..
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKE-VMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSC-EEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCc-eEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 88997 8777654 4789999 443 55567777788987 9999 99 444444 5678888 53
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=90.84 E-value=0.1 Score=46.49 Aligned_cols=58 Identities=19% Similarity=0.205 Sum_probs=37.9
Q ss_pred CCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 41 DGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 41 ~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
+|.|++|+.||.|+.||..+++..-+ ++. +++.+..+.+||+.+++.+ +..|..||..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~-~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWT-LKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEE-EEC--CCSCCCC-----CCEEECTTTCCEEEC---
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEE-ecC--CCceecceEcCCCEEEEeCCCCEEEEEECC
Confidence 55799999999999999887765532 333 5677777778887776654 6889999974
No 228
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.82 E-value=10 Score=36.54 Aligned_cols=69 Identities=14% Similarity=0.180 Sum_probs=53.0
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCC-C-CCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFP-G-LGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lp-g-lGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+.+.+++.+++|.|-+|+.+|-|-.||..+++ .+.... + ....|.+|...++|+..++|. ..|..+|.
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~ 476 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK-FQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDL 476 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCE-EEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEES
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCc-EEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeC
Confidence 456889999999999999987778889986554 332221 2 356899999999999888887 77888884
No 229
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=90.80 E-value=0.5 Score=39.23 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=41.9
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
.++++.+++|.|.+|+.+|.|..||. +++... .++--+..+.++.+.+||+..++|....|.+.+..
T Consensus 257 ~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~-~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 257 ESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKW-NFETGSWIIATPVIDENGTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp CSCCEECTTSCEEEECTTCEEEEECT-TSCEEE-EEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC-
T ss_pred cccceEcCCCeEEEecCCCCEEEECC-CCcEEE-EEEcCCccccceEEcCCCEEEEEcCCCeEEEEecc
Confidence 34566666778888888888888886 333221 12212455677777788887777666667665543
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.57 E-value=0.72 Score=39.00 Aligned_cols=64 Identities=5% Similarity=-0.126 Sum_probs=48.2
Q ss_pred eEEEecCCCc--EEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 34 QCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 34 t~vats~~G~--IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
...+.+++|. ++++..+|.|..||.. ++ .. .+...+..+.++.+++||+.++++.. ..|.+||.
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~-~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VD-VLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EE-EEEESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EE-EEeCCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 5778899988 7888889999999983 33 22 23334567899999999997777664 56888873
No 231
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.97 E-value=0.75 Score=39.20 Aligned_cols=66 Identities=12% Similarity=0.200 Sum_probs=45.8
Q ss_pred eeEEEecC-CCcEEEeCC------------------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-CC
Q 044877 33 FQCFASTG-DGSIVVGSL------------------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-TD 92 (244)
Q Consensus 33 Ft~vats~-~G~IavGS~------------------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~~ 92 (244)
...++.++ +|.|+++.. +|.|..||..+++ .+....++..| .+|++++||++|..+ +.
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~-~~~~~~~~~~p-~gia~~~dg~~lyv~d~~ 205 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE-TTLLLKELHVP-GGAEVSADSSFVLVAEFL 205 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE-EEEEEEEESCC-CEEEECTTSSEEEEEEGG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE-EEEeccCCccC-cceEECCCCCEEEEEeCC
Confidence 46799999 999887653 3778888875543 33333444444 589999999976644 43
Q ss_pred -cceEEEEe
Q 044877 93 -TYLILICT 100 (244)
Q Consensus 93 -~~L~L~dt 100 (244)
..|..++.
T Consensus 206 ~~~I~~~~~ 214 (322)
T 2fp8_A 206 SHQIVKYWL 214 (322)
T ss_dssp GTEEEEEES
T ss_pred CCeEEEEEC
Confidence 66888885
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=89.88 E-value=0.35 Score=46.49 Aligned_cols=58 Identities=17% Similarity=0.232 Sum_probs=40.5
Q ss_pred ceeEEEecCCCc-EEEeCC-CCcEEEEeccc---cccceecCCCCC-----------CC----eeEEEeCCCCCEEEEeC
Q 044877 32 NFQCFASTGDGS-IVVGSL-DGKIRLYSSNS---MRQAKTAFPGLG-----------SP----IRYVDVTYDGRWILGTT 91 (244)
Q Consensus 32 ~Ft~vats~~G~-IavGS~-dG~IRLyD~~~---~r~aKt~lpglG-----------dP----I~~vdvS~DG~~lLaT~ 91 (244)
--+.++.|++|. ++++.. .|.|++||... .+... .++ +| .+ =.++.+||||+||++|+
T Consensus 322 ~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~-~I~-tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 322 LVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG-KVK-LGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE-EEE-CBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred ceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE-EEE-eCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 357899999998 666554 78999999742 12122 122 33 22 27899999999999888
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=89.87 E-value=1.2 Score=38.63 Aligned_cols=67 Identities=9% Similarity=0.063 Sum_probs=43.7
Q ss_pred eeEEEecC-CCcEEEeC----CCCcEEEEeccccccceecCCC-----------------------------CCCCeeEE
Q 044877 33 FQCFASTG-DGSIVVGS----LDGKIRLYSSNSMRQAKTAFPG-----------------------------LGSPIRYV 78 (244)
Q Consensus 33 Ft~vats~-~G~IavGS----~dG~IRLyD~~~~r~aKt~lpg-----------------------------lGdPI~~v 78 (244)
+..+++++ +|.+++.. .++.|.+||..+++..+ .+.+ ....+.+|
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r-~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gi 200 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR-VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGI 200 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE-ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE-EecCCCcccccccceeECCEEEEeccCCCceeceeccccee
Confidence 47889997 46765553 57899999986554222 2322 11236889
Q ss_pred EeCCCCCEEEEeCC--cceEEEEe
Q 044877 79 DVTYDGRWILGTTD--TYLILICT 100 (244)
Q Consensus 79 dvS~DG~~lLaT~~--~~L~L~dt 100 (244)
++||||++|..+.. +.|.-+++
T Consensus 201 a~s~dg~~ly~~~~~~~~l~~~~~ 224 (343)
T 2qe8_A 201 VLDAENEWLYLSPMHSTSMYRIKS 224 (343)
T ss_dssp EECTTSCEEEEEESSCSEEEEEEH
T ss_pred EeccCCCEEEEEeCCCCeEEEEEH
Confidence 99999998886654 33544454
No 234
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.36 E-value=1.6 Score=38.70 Aligned_cols=56 Identities=14% Similarity=0.227 Sum_probs=37.5
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCC----CCCCCeeEEEeCCC---CCEEEEe
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFP----GLGSPIRYVDVTYD---GRWILGT 90 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lp----glGdPI~~vdvS~D---G~~lLaT 90 (244)
=..++++++|.|+++...|.|+.++. +.......+| +.+ -..+|+++|| +.+|.++
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~~-g~~~~~~~~~v~~~g~~-~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFRE-GRLSTYAELSVYHRGES-GLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEET-TEEEEEEECCCCCSTTC-SEEEEEECTTTTTSCEEEEE
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEEC-CCccEeecceEeecCCC-CceeEEECCCCCCCCEEEEE
Confidence 36899999999999999999999983 2111111122 233 4589999999 5555433
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=88.87 E-value=0.79 Score=38.01 Aligned_cols=18 Identities=6% Similarity=-0.101 Sum_probs=12.5
Q ss_pred cceEEEEeeCCeEEEEec
Q 044877 157 QERHLVATVGKFSVIWNF 174 (244)
Q Consensus 157 ~E~~IvtStG~fvvvWn~ 174 (244)
+..+.+++.+..++.+|-
T Consensus 265 ~g~l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 265 TDTIYFGSYDGHLYAINP 282 (330)
T ss_dssp TSCEEEECTTCEEEEECT
T ss_pred CCeEEEecCCCCEEEECC
Confidence 456667777768888873
No 236
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.42 E-value=0.94 Score=45.22 Aligned_cols=86 Identities=13% Similarity=0.184 Sum_probs=50.4
Q ss_pred CCCCeeEEEeCCCCCEEEEeCC--cceEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccchhhcCCccceeee--
Q 044877 71 LGSPIRYVDVTYDGRWILGTTD--TYLILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDSHLAGVNNKFHKA-- 146 (244)
Q Consensus 71 lGdPI~~vdvS~DG~~lLaT~~--~~L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~a-- 146 (244)
..-.--++++||||+|++++-+ .++-++|..- +..-|.++ .|.|+++...-.++..-|.
T Consensus 321 ~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k----------~~~~~~~k-------~~~~~~~~~ae~e~GlGPlHt 383 (638)
T 3sbq_A 321 VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK----------LPDLFAGK-------LADPRDVIVGEPELGLGPLHT 383 (638)
T ss_dssp ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG----------HHHHHTTC-------CSCGGGGEEECCBCCSCEEEE
T ss_pred CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh----------hhhhhhcc-------ccCcccceEeeccCCCcccEE
Confidence 4444568999999999999974 7799999642 11112222 2345554333222333333
Q ss_pred eeeeecCCCCcceEEEEeeCCeEEEEechhhh
Q 044877 147 QFSWVTENGKQERHLVATVGKFSVIWNFQQVK 178 (244)
Q Consensus 147 kFn~~tg~~~~E~~IvtStG~fvvvWn~~kV~ 178 (244)
.|+ +.+.-..+-..++-|+.||+++.+
T Consensus 384 ~Fd-----~~G~aYTtlfidSqvvkWni~~a~ 410 (638)
T 3sbq_A 384 TFD-----GRGNAYTTLFIDSQVVKWNMEEAV 410 (638)
T ss_dssp EEC-----SSSEEEEEETTTTEEEEEEHHHHH
T ss_pred EEC-----CCCceEeeeeecceEEEEeccHHH
Confidence 453 223222223378999999999875
No 237
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=88.39 E-value=0.88 Score=39.43 Aligned_cols=58 Identities=16% Similarity=0.035 Sum_probs=40.4
Q ss_pred eEEEecCCCcE-EEeCCCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeCC
Q 044877 34 QCFASTGDGSI-VVGSLDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 34 t~vats~~G~I-avGS~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~~ 92 (244)
..++++++|.| ++.+.++.|+.||..+++ .++... ....-.++|++++||+.+++++.
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECCCCcEEEEeCc
Confidence 46899999994 556678899999983333 222221 12445789999999987777764
No 238
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.19 E-value=0.9 Score=38.68 Aligned_cols=66 Identities=9% Similarity=0.071 Sum_probs=47.3
Q ss_pred eEEEecCCCc-EEEeCCCCcEEEEeccccccceecC-C------------------CCCCCeeEEEeCC-CCCEEEEeCC
Q 044877 34 QCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAF-P------------------GLGSPIRYVDVTY-DGRWILGTTD 92 (244)
Q Consensus 34 t~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~l-p------------------glGdPI~~vdvS~-DG~~lLaT~~ 92 (244)
.+++.+++|. ++++..+|.|..||..+.+ .++.. + ..+....+|.+.+ +|+.++|...
T Consensus 22 ~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCEECCTTCSSEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred eEEEEcCCCCEEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 5788999998 9999999999999986542 22111 1 0112468999997 8887777776
Q ss_pred cceEEEEe
Q 044877 93 TYLILICT 100 (244)
Q Consensus 93 ~~L~L~dt 100 (244)
..|..+|.
T Consensus 101 ~~i~~~d~ 108 (322)
T 2fp8_A 101 YHLSVVGS 108 (322)
T ss_dssp TEEEEECT
T ss_pred CCEEEEeC
Confidence 66777763
No 239
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=86.83 E-value=2 Score=39.82 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=49.3
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEecc--c---ccc-ceecCCCCCCCeeEEEe--CCCCC-EEEEeCC--cceEEEEee
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSN--S---MRQ-AKTAFPGLGSPIRYVDV--TYDGR-WILGTTD--TYLILICTL 101 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~--~---~r~-aKt~lpglGdPI~~vdv--S~DG~-~lLaT~~--~~L~L~dt~ 101 (244)
--|++=.+.|.|++|-++--|..||.. + .+. ++--.+++...+.+|++ .+||+ ||+++|+ +.+.+||..
T Consensus 183 EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 183 EGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 345555558889999998889999964 1 111 11113456678999999 78888 9999995 679999963
No 240
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=86.82 E-value=2 Score=39.36 Aligned_cols=67 Identities=10% Similarity=0.110 Sum_probs=45.0
Q ss_pred eeEEEecC-CCcEEEeC-CCCcEEEEecccccc-ceecCCCCCCCeeEEEeCCCCCEEEEe-CC-cceEEEEe
Q 044877 33 FQCFASTG-DGSIVVGS-LDGKIRLYSSNSMRQ-AKTAFPGLGSPIRYVDVTYDGRWILGT-TD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~-~G~IavGS-~dG~IRLyD~~~~r~-aKt~lpglGdPI~~vdvS~DG~~lLaT-~~-~~L~L~dt 100 (244)
-..+++++ +|.|+++. ..+.|+.||..+... ....+++.+. -.+|+++|||++|..+ .. ..|..++.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~-P~gia~~pdG~~lyv~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW-EFHIQFHPSGNYAYIVVVNQHYILRSDY 299 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC-CEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc-ceeEEEcCCCCEEEEEECCCCEEEEEeC
Confidence 36788999 88977655 678899999865432 1112233223 4699999999966654 43 66888775
No 241
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=86.81 E-value=1.5 Score=40.41 Aligned_cols=67 Identities=10% Similarity=0.046 Sum_probs=44.3
Q ss_pred eeEEEecC-CCcEEEeC-CCCcEEEEeccccccceecCCCCC-CC-eeEEEeCCCCCEEEEe-CC-cceEEEEe
Q 044877 33 FQCFASTG-DGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGLG-SP-IRYVDVTYDGRWILGT-TD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~-~G~IavGS-~dG~IRLyD~~~~r~aKt~lpglG-dP-I~~vdvS~DG~~lLaT-~~-~~L~L~dt 100 (244)
...+++++ +|.|+++. ..|.|+.||..++....+++ ..+ .+ -.+|+++|||++|..+ +. ..|+.++.
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-ECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-ccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 46788999 89988776 56789999986443212222 122 12 2379999999966544 43 66888774
No 242
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=85.77 E-value=2.4 Score=41.84 Aligned_cols=65 Identities=14% Similarity=0.076 Sum_probs=50.4
Q ss_pred eeEEEecCCCc--EEEeCCCCcEEEEeccccc------------cceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceE
Q 044877 33 FQCFASTGDGS--IVVGSLDGKIRLYSSNSMR------------QAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLI 96 (244)
Q Consensus 33 Ft~vats~~G~--IavGS~dG~IRLyD~~~~r------------~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~ 96 (244)
--++++||||. ++++-.++.|-+||..+.+ ... -+.+|.--.|+.|++|| ++-.++ ++.+.
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~--~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA--EPELGLGPLHTAFDGRG-NAYTSLFLDSQVV 355 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE--CCBCCSCEEEEEECTTS-EEEEEETTTTEEE
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE--EcCCCCCcceEEECCCC-eEEEEEecCCcEE
Confidence 46899999998 6777789999999997542 122 23477778999999999 666665 47799
Q ss_pred EEEe
Q 044877 97 LICT 100 (244)
Q Consensus 97 L~dt 100 (244)
.||.
T Consensus 356 kwdi 359 (595)
T 1fwx_A 356 KWNI 359 (595)
T ss_dssp EEEH
T ss_pred EEEh
Confidence 9995
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.62 E-value=12 Score=31.93 Aligned_cols=60 Identities=8% Similarity=0.138 Sum_probs=40.2
Q ss_pred CCcEEEeCCCCcEEEEeccccccc-eecCCCC-------CCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 41 DGSIVVGSLDGKIRLYSSNSMRQA-KTAFPGL-------GSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 41 ~G~IavGS~dG~IRLyD~~~~r~a-Kt~lpgl-------GdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
+|.|++++.+|.|..||..+++.. +..++.- +.++.+.-...+|+.++++.+..|..+|.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~ 120 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNT 120 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEEC
Confidence 567999999999999999766543 2222211 44555444445666666666788988886
No 244
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=83.07 E-value=3.3 Score=35.10 Aligned_cols=58 Identities=12% Similarity=-0.055 Sum_probs=39.7
Q ss_pred eEEEecCCCcEEEeCC-CCcEEEEecccccccee-cCCCCCCCeeEEEeC---CCCCEEEEeCC
Q 044877 34 QCFASTGDGSIVVGSL-DGKIRLYSSNSMRQAKT-AFPGLGSPIRYVDVT---YDGRWILGTTD 92 (244)
Q Consensus 34 t~vats~~G~IavGS~-dG~IRLyD~~~~r~aKt-~lpglGdPI~~vdvS---~DG~~lLaT~~ 92 (244)
..++++++|+|+++.. .+.|..||..+ +.... .++.-..-.++++++ +|+++|.+|+.
T Consensus 215 ~gi~vd~dG~l~va~~~~~~V~~~~~~G-~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 215 DDFAFDVEGNLYGATHIYNSVVRIAPDR-STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp SSEEEBTTCCEEEECBTTCCEEEECTTC-CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCeEECCCCCEEEEeCCCCeEEEECCCC-CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 5688999999777764 68899999743 22111 122112457899999 89998887764
No 245
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=81.57 E-value=2.4 Score=41.57 Aligned_cols=68 Identities=7% Similarity=-0.073 Sum_probs=44.3
Q ss_pred eeEEEecCCCc-EEEeCCC-----CcEEEEeccccccc-eecCC-CCCCCeeEEEeCCCCCEEEEeCC----cceEEEEe
Q 044877 33 FQCFASTGDGS-IVVGSLD-----GKIRLYSSNSMRQA-KTAFP-GLGSPIRYVDVTYDGRWILGTTD----TYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~-IavGS~d-----G~IRLyD~~~~r~a-Kt~lp-glGdPI~~vdvS~DG~~lLaT~~----~~L~L~dt 100 (244)
+..++.+++|. |+..+.| ..|.+++..+.... ...+. ..+.-..++.+||||+||+.++. +.|.++|.
T Consensus 223 ~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~ 302 (751)
T 2xe4_A 223 NGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDL 302 (751)
T ss_dssp CSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEES
T ss_pred eeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 56788999996 7776665 25777777554211 22221 12334678999999999996652 33778875
No 246
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=80.72 E-value=1.4 Score=37.95 Aligned_cols=58 Identities=21% Similarity=0.266 Sum_probs=39.1
Q ss_pred CCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEE
Q 044877 41 DGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILIC 99 (244)
Q Consensus 41 ~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~d 99 (244)
+|.|++++.+|.|..||..+++..- ..+..+.++.+.-+..+|+.++.+.+..|..||
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~-~~~~~~~~~~~~~~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVA-QQKVDSSGFQTEPVAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEE-EEECCTTCBCSCCEEETTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEE-EEecCCCcceeCCEEECCEEEEEeCCCEEEEEe
Confidence 5689999999999999987765332 122224444443333577777677677888776
No 247
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=80.44 E-value=4.9 Score=35.79 Aligned_cols=57 Identities=18% Similarity=0.193 Sum_probs=38.5
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCC----CCCCCeeEEEeCCC----CCEEEEeC
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFP----GLGSPIRYVDVTYD----GRWILGTT 91 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lp----glGdPI~~vdvS~D----G~~lLaT~ 91 (244)
=.++++.++|.|+++..+|.|+++|.. ++..-..+| +. .-..+|+++|| |...++.+
T Consensus 31 P~~ia~~pdG~l~V~e~~g~I~~~d~~-G~~~~~~~~v~~~g~-~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVTERPGRLVLISPS-GKKLVASFDVANVGE-AGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEEEEEETTEEEEEETTTEEEEECSS-CEEEEEECCCCCSTT-CSEEEEEECTTTTTSCEEEEEEE
T ss_pred CeEEEEcCCCeEEEEeCCCEEEEEeCC-CceEeeccceeecCC-CceeeEEeCCCCCcCCEEEEEEe
Confidence 468999999999999999999999853 321111122 22 34689999998 44444444
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=80.27 E-value=2 Score=41.98 Aligned_cols=53 Identities=19% Similarity=0.287 Sum_probs=36.8
Q ss_pred EEecCCCcEEEeCCCCcEEEEeccccccce-ecCC--CCCCCeeEEEeCCCCCEEEEeC
Q 044877 36 FASTGDGSIVVGSLDGKIRLYSSNSMRQAK-TAFP--GLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 36 vats~~G~IavGS~dG~IRLyD~~~~r~aK-t~lp--glGdPI~~vdvS~DG~~lLaT~ 91 (244)
..++..|-|++|+.||.||.||..+++..- ..++ ..+.|++ ++.||+..++..
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~t---y~~~G~qyv~~~ 536 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVT---YSVDGEQYVTFM 536 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE---EEETTEEEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceE---EEECCEEEEEEE
Confidence 444566679999999999999998877542 2233 2345654 478999777654
No 249
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=78.81 E-value=2.4 Score=38.81 Aligned_cols=56 Identities=13% Similarity=0.025 Sum_probs=42.9
Q ss_pred eEEEecC--CCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 34 QCFASTG--DGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 34 t~vats~--~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
+.+|++| +|.|++....+.|+.+|..+.. ..++.+ -+..-.+|++++||++|.++.
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~-v~~~~~-~~~~P~~ia~d~~G~~lyvad 197 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEY-VSTVYS-GLSKVRTICWTHEADSMIITN 197 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTE-EEEEEC-CCSCEEEEEECTTSSEEEEEE
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCE-EEEEec-CCCCcceEEEeCCCCEEEEEe
Confidence 6889996 4778888777999999986643 444455 445567999999999777665
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=78.28 E-value=8 Score=33.91 Aligned_cols=79 Identities=6% Similarity=0.058 Sum_probs=49.0
Q ss_pred ceecccccccCCCC-ce-eEEEecCCCcEEEeCC---CCcEEEEeccccccceecCCCCCCCe--eEEEeCCCCCEEEEe
Q 044877 18 VLNWSQGHQFSRGT-NF-QCFASTGDGSIVVGSL---DGKIRLYSSNSMRQAKTAFPGLGSPI--RYVDVTYDGRWILGT 90 (244)
Q Consensus 18 ~~~~~~~k~Y~~~~-~F-t~vats~~G~IavGS~---dG~IRLyD~~~~r~aKt~lpglGdPI--~~vdvS~DG~~lLaT 90 (244)
.+.+.--..|.-.. .| ..++++++|.+++++. ++.|+.+|..+++..++ ++ ++... .++++. |+.|-.+
T Consensus 6 ~~~~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~-i~-l~~~~fgeGi~~~--g~~lyv~ 81 (266)
T 2iwa_A 6 VYIVEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENI-HK-MDDSYFGEGLTLL--NEKLYQV 81 (266)
T ss_dssp EEEEEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEE-EE-CCTTCCEEEEEEE--TTEEEEE
T ss_pred ccCceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEE-Ee-cCCCcceEEEEEe--CCEEEEE
Confidence 44444444553333 35 6888999889777653 58999999988875553 33 33322 355554 5555444
Q ss_pred C--CcceEEEEe
Q 044877 91 T--DTYLILICT 100 (244)
Q Consensus 91 ~--~~~L~L~dt 100 (244)
+ .+.+.++|.
T Consensus 82 t~~~~~v~viD~ 93 (266)
T 2iwa_A 82 VWLKNIGFIYDR 93 (266)
T ss_dssp ETTCSEEEEEET
T ss_pred EecCCEEEEEEC
Confidence 4 477888995
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=78.05 E-value=10 Score=30.94 Aligned_cols=66 Identities=17% Similarity=0.048 Sum_probs=45.1
Q ss_pred eeEEEecC-CCcEEEeC-CCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeC-C-cceEEEEe
Q 044877 33 FQCFASTG-DGSIVVGS-LDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTT-D-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~-~G~IavGS-~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~-~-~~L~L~dt 100 (244)
..+++.++ +|.|++.. ..+.|..||..+.. ..+.++ ++. ...+|++.+++..|..+. . +.|..++.
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~-~p~~ia~d~~~~~lyv~d~~~~~I~~~~~ 108 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLG-SPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCC-CEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCC-CccEEEEEecCCeEEEEECCCCEEEEEEc
Confidence 46899998 45666554 57899999986543 333443 333 458999999877766554 3 56887774
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=77.78 E-value=10 Score=30.96 Aligned_cols=66 Identities=8% Similarity=-0.042 Sum_probs=43.9
Q ss_pred eeEEEecC-CCcEEEeCC---CCcEEEEeccccccceecC-CCCCCCeeEEEeCCCCCEEEEeC-C-cceEEEEe
Q 044877 33 FQCFASTG-DGSIVVGSL---DGKIRLYSSNSMRQAKTAF-PGLGSPIRYVDVTYDGRWILGTT-D-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~-~G~IavGS~---dG~IRLyD~~~~r~aKt~l-pglGdPI~~vdvS~DG~~lLaT~-~-~~L~L~dt 100 (244)
-..+++++ .|.|++... .+.|..++..+. ..+.+. .+++ --.+|++++||.+|..+. . +.|..+|.
T Consensus 124 P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~-~P~gia~d~~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 124 PRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLG-LPNGLTFDAFSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp EEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCS-CEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCC-CCcEEEEcCCCCEEEEEECCCCEEEEEec
Confidence 46889998 577777665 378888886432 223222 2343 357999999988876554 3 66888874
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=77.40 E-value=1.3 Score=43.32 Aligned_cols=56 Identities=7% Similarity=0.018 Sum_probs=38.0
Q ss_pred ceeEEEec-CCCc-EEEeCC-CC----cEEEEecccc-ccceecCCC-CCCCeeEEEeCCCCCEEEEeC
Q 044877 32 NFQCFAST-GDGS-IVVGSL-DG----KIRLYSSNSM-RQAKTAFPG-LGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 32 ~Ft~vats-~~G~-IavGS~-dG----~IRLyD~~~~-r~aKt~lpg-lGdPI~~vdvS~DG~~lLaT~ 91 (244)
...+.+.| |+|. ||-++. +| .|+++|..++ + .++. +.....++.+||||++|+.+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~----~l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ----TIADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC----CCCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE----eCCccccCceeeEEEecCCCEEEEEE
Confidence 35778999 9998 664333 33 4999999766 3 1221 222245788999999998775
No 254
>1xks_A Nuclear pore complex protein NUP133; beta-propeller, helical insertions, protein transport; 2.35A {Homo sapiens} SCOP: b.69.14.1
Probab=77.36 E-value=15 Score=34.77 Aligned_cols=58 Identities=19% Similarity=0.312 Sum_probs=39.1
Q ss_pred cEEEeCCCCcEEEEecccc--ccceecCCCCC-CCeeEEEeCCCCCEEEEeCCcceEEEEee
Q 044877 43 SIVVGSLDGKIRLYSSNSM--RQAKTAFPGLG-SPIRYVDVTYDGRWILGTTDTYLILICTL 101 (244)
Q Consensus 43 ~IavGS~dG~IRLyD~~~~--r~aKt~lpglG-dPI~~vdvS~DG~~lLaT~~~~L~L~dt~ 101 (244)
.||+-. .|.||.|..... +-....++--| +-|+.+.--.-.-+||||+...|.++-.+
T Consensus 111 lliVsp-tG~VryWesIs~~~~~~ei~~~L~~~E~vt~l~n~epaGfIlaTStgrl~~lsir 171 (450)
T 1xks_A 111 VMVATR-EGSIRYWPSLAGEDTYTEAFVDSGGDKTYSFLTAVQGGSFILSSSGSQLIRLIPE 171 (450)
T ss_dssp EEEECT-TCEEEEESCTTCTTCCEEEECC----CCEEEEEEETTTEEEEEETTCCEEEEEEC
T ss_pred EEEEcC-CccEEEccccCCCCceEEEEecCCCCceEEEEeecCCceEEEEeccceEEEEEec
Confidence 366666 999999998643 11223334334 78888866666779999999988777753
No 255
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=76.34 E-value=13 Score=32.02 Aligned_cols=66 Identities=14% Similarity=0.056 Sum_probs=44.4
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEecccccc-ceecCCC--CCCCeeEEEeCCCCCEEEEeCCcce
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQ-AKTAFPG--LGSPIRYVDVTYDGRWILGTTDTYL 95 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~-aKt~lpg--lGdPI~~vdvS~DG~~lLaT~~~~L 95 (244)
...+..++.+++|.+++++.+|.|++.+.-.++. .+...|. .+..+.+|.+.++++.++++....|
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i 272 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL 272 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE
Confidence 3457889999999988888899999884211111 1111231 2346899999999998877766555
No 256
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=75.15 E-value=8.3 Score=35.36 Aligned_cols=55 Identities=7% Similarity=-0.069 Sum_probs=41.4
Q ss_pred eEEEecCC---CcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC
Q 044877 34 QCFASTGD---GSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 34 t~vats~~---G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~ 91 (244)
.+++++++ |.|+++...+.||.+|..+++ ..++.+ -.....+|++++||+ |..+.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~-v~~~~~-~~~~P~giavd~dG~-lyVad 199 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY-VDIKTT-NIGQCADVNFTLNGD-MVVVD 199 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTE-EEEECC-CCSCEEEEEECTTCC-EEEEE
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCE-EEEeec-CCCCccEEEECCCCC-EEEEc
Confidence 58999984 889998877999999986553 444444 344578999999999 55444
No 257
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=72.66 E-value=1.8 Score=42.07 Aligned_cols=49 Identities=18% Similarity=0.185 Sum_probs=35.7
Q ss_pred CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 51 GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 51 G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
|.|+.||..+++..-. ++ ++.|+.+..++.+|..|..++ +.+|+.||..
T Consensus 457 g~l~A~D~~tG~~~W~-~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWS-VE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEEEETTTTEEEEE-EE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred cEEEEEeCCCCcEEee-cC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 8899999988764432 33 566777777777777776665 5889999973
No 258
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=72.56 E-value=15 Score=35.31 Aligned_cols=69 Identities=20% Similarity=0.297 Sum_probs=48.7
Q ss_pred CCCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCC-CCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 29 RGTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPG-LGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 29 ~~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpg-lGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
+.+..+|++-+.+|.|-+|..+|..| ||....+.-. ..+. ....|.+|....+|..-++| .+.|..+|.
T Consensus 20 ~~n~V~~I~qD~~G~lWigT~~GL~r-yDG~~~~~~~-~~~~~~~~~i~~i~~d~~g~lWigT-~~Gl~~yd~ 89 (758)
T 3ott_A 20 EASVVSCFLQDSEGLIWIGSNKGLFS-YDGYSTQQHF-TYGENNNTRIYCGVIIDNTYLYMGT-DNGILVYNY 89 (758)
T ss_dssp SCCCEEEEEECTTSCEEEEESSCEEE-ECSSCEEECS-CTTSTTSSCEEEEEEETTTEEEEEE-TTEEEEEET
T ss_pred ccceEEEEEECCCCCEEEEECCCccc-cCCCceEEEE-ccCCCCCceEEEEEEcCCCcEEEEe-CCCeEEEeC
Confidence 45679999999999999999999765 7864332111 1112 24579999888888766666 456878875
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=69.27 E-value=3.5 Score=39.51 Aligned_cols=53 Identities=25% Similarity=0.334 Sum_probs=34.8
Q ss_pred EEecCCCcEEEeCCCCcEEEEeccccccc-eecCC--CCCCCeeEEEeCCCCCEEEEeC
Q 044877 36 FASTGDGSIVVGSLDGKIRLYSSNSMRQA-KTAFP--GLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 36 vats~~G~IavGS~dG~IRLyD~~~~r~a-Kt~lp--glGdPI~~vdvS~DG~~lLaT~ 91 (244)
..++..|.|++|+.||.+|.||..+++.. +..+| ..+.|++ .+.||+..++..
T Consensus 492 ~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~---y~~~G~qYv~~~ 547 (582)
T 1flg_A 492 VLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPIT---WEQDGEQYLGVT 547 (582)
T ss_dssp CEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE---EEETTEEEEEEE
T ss_pred ceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceE---EEECCEEEEEEE
Confidence 34456778999999999999999877644 22233 1234543 357998665543
No 260
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=68.91 E-value=5.3 Score=38.84 Aligned_cols=52 Identities=21% Similarity=0.332 Sum_probs=35.0
Q ss_pred EEecCCCcEEEeCCCCcEEEEeccccccceec-CC--CCCCCeeEEEeCCCCCEEEEe
Q 044877 36 FASTGDGSIVVGSLDGKIRLYSSNSMRQAKTA-FP--GLGSPIRYVDVTYDGRWILGT 90 (244)
Q Consensus 36 vats~~G~IavGS~dG~IRLyD~~~~r~aKt~-lp--glGdPI~~vdvS~DG~~lLaT 90 (244)
..++..|.+++|+.||.++.||..+++...++ ++ ..+.|++. +.||+.+++.
T Consensus 483 ~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y---~~~G~~~v~~ 537 (677)
T 1kb0_A 483 TLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTY---MVDGRQYVSV 537 (677)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---EETTEEEEEE
T ss_pred ceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEE---EeCCEEEEEE
Confidence 33445567999999999999999887755432 22 13345543 5899866654
No 261
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=68.89 E-value=1.5 Score=38.81 Aligned_cols=60 Identities=12% Similarity=0.231 Sum_probs=34.4
Q ss_pred CCcEEEeCCCCcEEEEecccccccee-cCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 41 DGSIVVGSLDGKIRLYSSNSMRQAKT-AFPGLGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 41 ~G~IavGS~dG~IRLyD~~~~r~aKt-~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
++.|++|+.||.|+.||..+++..-+ ...+...|+..-+...++..++++.+..|..||.
T Consensus 130 ~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 130 TSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp ---EEEEEEEEEEECCCSSSSSCCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred CCEEEEEecCCEEEEEECCCCCEEEeEecccccCccccCCccccceEEEECCCCEEEEEEC
Confidence 34599999999999999977653321 1122222322111222366665555677888886
No 262
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=68.88 E-value=10 Score=33.53 Aligned_cols=48 Identities=17% Similarity=0.254 Sum_probs=33.9
Q ss_pred eEEEecCCCc-EEEeCCCCcEEEEeccccccceec---CCCC---C-CCeeEEEeCCC
Q 044877 34 QCFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTA---FPGL---G-SPIRYVDVTYD 83 (244)
Q Consensus 34 t~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~---lpgl---G-dPI~~vdvS~D 83 (244)
..+++.++|. |.++...|.|+++|..+. ..+. +|.+ | .-..+|+++||
T Consensus 21 ~~i~~~pdG~~l~V~e~~G~i~~~~~~g~--~~~~~~~~~~v~~~g~~g~~gia~~pd 76 (353)
T 2g8s_A 21 WALAFLPDNHGMLITLRGGELRHWQAGKG--LSAPLSGVPDVWAHGQGGLLDVVLAPD 76 (353)
T ss_dssp EEEEECSTTCCEEEEETTTEEEEEETTTE--ECCCCBSCCCCCCSTTCSEEEEEECTT
T ss_pred EEEEEcCCCCEEEEEeCCceEEEEeCCCc--eeeEecCCcccccCCCCCceeEEECCC
Confidence 6899999999 999999999999986322 1111 2211 1 23479999996
No 263
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=67.77 E-value=11 Score=37.05 Aligned_cols=54 Identities=6% Similarity=0.060 Sum_probs=36.2
Q ss_pred EEecCCCcEEEeCCCC-------------cEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEe
Q 044877 36 FASTGDGSIVVGSLDG-------------KIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGT 90 (244)
Q Consensus 36 vats~~G~IavGS~dG-------------~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT 90 (244)
+++++.|.|.++-..+ .+-.++..+++ ++.++- ..|..++++++||||++|..+
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~-~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCe-EEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 6789999976664432 34555554443 333331 278999999999999988544
No 264
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=67.55 E-value=2.8 Score=39.93 Aligned_cols=54 Identities=22% Similarity=0.459 Sum_probs=35.6
Q ss_pred EEEecCCCcEEEeCCCCcEEEEeccccccceec-CC--CCCCCeeEEEeCCCCCEEEEeC
Q 044877 35 CFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTA-FP--GLGSPIRYVDVTYDGRWILGTT 91 (244)
Q Consensus 35 ~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~-lp--glGdPI~~vdvS~DG~~lLaT~ 91 (244)
+...+.+|.|++|+.||.|+.||..+++..-+. ++ ..+.|++ ..+||+.++++.
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~---~~~~G~~yv~~~ 525 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMT---YSFKGKQYIGSM 525 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEE---EEETTEEEEEEE
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEE---EEECCEEEEEEE
Confidence 333455678999999999999999887754322 12 1334443 347888776654
No 265
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=66.47 E-value=6.8 Score=37.56 Aligned_cols=65 Identities=9% Similarity=0.038 Sum_probs=44.5
Q ss_pred EEEecCCCcEEEeC-------CCCcEEEEeccccccceecCC-CCCCCeeE--EEeCCCCCEEEEeC-------------
Q 044877 35 CFASTGDGSIVVGS-------LDGKIRLYSSNSMRQAKTAFP-GLGSPIRY--VDVTYDGRWILGTT------------- 91 (244)
Q Consensus 35 ~vats~~G~IavGS-------~dG~IRLyD~~~~r~aKt~lp-glGdPI~~--vdvS~DG~~lLaT~------------- 91 (244)
.++++|+| |++.. ..|.|-++|..+.+...+ ++ +-+..-.+ +-++||+++++++.
T Consensus 142 ~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~-~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~ 219 (462)
T 2ece_A 142 TVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGK-WEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKL 219 (462)
T ss_dssp EEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEE-CCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCT
T ss_pred ceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEE-EccCCCCccccceEEECCCCCEEEEccCcCccccccccch
Confidence 35788999 65522 236899999988765554 44 32322233 56699999998885
Q ss_pred -------CcceEEEEee
Q 044877 92 -------DTYLILICTL 101 (244)
Q Consensus 92 -------~~~L~L~dt~ 101 (244)
.+.|.+||..
T Consensus 220 ~~~~~~~~d~V~v~D~~ 236 (462)
T 2ece_A 220 EHLKDRYGNRIHFWDLR 236 (462)
T ss_dssp TTHHHHSCCEEEEEETT
T ss_pred hhhhhccCCEEEEEECC
Confidence 4779999973
No 266
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=66.22 E-value=19 Score=35.63 Aligned_cols=70 Identities=11% Similarity=0.135 Sum_probs=44.4
Q ss_pred CCceeEEEec----CCC--c--EEEeCCCCcEE---EEeccccccceecCCCCCCCeeEEEeCCCC--CEEEEeCCcceE
Q 044877 30 GTNFQCFAST----GDG--S--IVVGSLDGKIR---LYSSNSMRQAKTAFPGLGSPIRYVDVTYDG--RWILGTTDTYLI 96 (244)
Q Consensus 30 ~~~Ft~vats----~~G--~--IavGS~dG~IR---LyD~~~~r~aKt~lpglGdPI~~vdvS~DG--~~lLaT~~~~L~ 96 (244)
+..||+||.+ .+| + +.+|..+|.|. ++.....-.-...+-..+.||..|.++++. ++|.+.+.+.|.
T Consensus 396 ~~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~ 475 (663)
T 1olz_A 396 DVNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVV 475 (663)
T ss_dssp SCCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEE
T ss_pred CCceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEE
Confidence 3468999974 333 4 89999999873 332211000011112257899999999998 999988876654
Q ss_pred EEE
Q 044877 97 LIC 99 (244)
Q Consensus 97 L~d 99 (244)
-+.
T Consensus 476 ~vp 478 (663)
T 1olz_A 476 QAP 478 (663)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 267
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.71 E-value=13 Score=36.85 Aligned_cols=91 Identities=10% Similarity=0.135 Sum_probs=52.0
Q ss_pred ceeE---EEecCCCcEEEeCCCC-------------cEEEEeccccccceecCCC-CCCCeeEEEeCCCCCEEEEeCCcc
Q 044877 32 NFQC---FASTGDGSIVVGSLDG-------------KIRLYSSNSMRQAKTAFPG-LGSPIRYVDVTYDGRWILGTTDTY 94 (244)
Q Consensus 32 ~Ft~---vats~~G~IavGS~dG-------------~IRLyD~~~~r~aKt~lpg-lGdPI~~vdvS~DG~~lLaT~~~~ 94 (244)
.|.| ++++++|.|.++..-+ .+-.+|..+++ .+.++.+ .+..++++++|||+++|..+.+
T Consensus 474 ~fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-l~~fl~~P~~aEpnGiafSPD~ktLfV~vQ-- 550 (592)
T 4a9v_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ-- 550 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-EEEEEECCTTCEEEEEEECTTSSEEEEEEE--
T ss_pred ccCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe-EEEEEeCCCCccccCCEECCCCCEEEEEEe--
Confidence 4555 7889999987744321 34555554443 4434432 4678999999999999865521
Q ss_pred eEEEEeeeccCCCCcccccccccCCCCCcceeeeeCccch
Q 044877 95 LILICTLFTDKNGTTKTGFNGRMGNKIAAPRLLKLTPLDS 134 (244)
Q Consensus 95 L~L~dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L~Pe~~ 134 (244)
.+.+ .. ..-|.++.++-.|.|=.+.|+-+|-
T Consensus 551 ------HPGe--~~-~~~~~s~wP~~~pR~a~v~i~r~dg 581 (592)
T 4a9v_A 551 ------HPGE--NG-GSTFPEHLPNGKPRSSVMAITREDG 581 (592)
T ss_dssp ------STTT--TS-CCCTTTCCTTCCCCCEEEEEEETTC
T ss_pred ------CCCC--CC-CcCccccCCCCCCcceEEEEEeeCC
Confidence 1111 11 1113344544356666666665554
No 268
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=63.44 E-value=15 Score=32.53 Aligned_cols=84 Identities=18% Similarity=0.218 Sum_probs=51.0
Q ss_pred cCCCceecccccccCC-CCceeE-EEecCCCcEEE-eCCCC--cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEE
Q 044877 14 AGAPVLNWSQGHQFSR-GTNFQC-FASTGDGSIVV-GSLDG--KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWIL 88 (244)
Q Consensus 14 ~~~~~~~~~~~k~Y~~-~~~Ft~-vats~~G~Iav-GS~dG--~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lL 88 (244)
..+|++.|.=-+.|.- ...||. +.++ +|.++. .+.+| .||.+|..+++..++ ++ ++...-+.-++++|..|-
T Consensus 24 ~~~~~~~~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~-~~-l~~~~FgeGit~~g~~ly 100 (262)
T 3nol_A 24 PSIPIYDYQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQ-IE-LGKRYFGEGISDWKDKIV 100 (262)
T ss_dssp -CCCEEEEEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEE-EE-CCTTCCEEEEEEETTEEE
T ss_pred CCCcccceEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEE-Ee-cCCccceeEEEEeCCEEE
Confidence 3455777776677743 334654 4555 678544 44556 899999998875553 34 555554444444555555
Q ss_pred EeC--CcceEEEEe
Q 044877 89 GTT--DTYLILICT 100 (244)
Q Consensus 89 aT~--~~~L~L~dt 100 (244)
..+ .+.+.++|.
T Consensus 101 ~ltw~~~~v~v~D~ 114 (262)
T 3nol_A 101 GLTWKNGLGFVWNI 114 (262)
T ss_dssp EEESSSSEEEEEET
T ss_pred EEEeeCCEEEEEEC
Confidence 444 467888886
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=62.85 E-value=8.4 Score=37.35 Aligned_cols=53 Identities=25% Similarity=0.400 Sum_probs=35.8
Q ss_pred EEEecCCCcEEEeCCCCcEEEEeccccccc-eecCC--CCCCCeeEEEeCCCCCEEEEe
Q 044877 35 CFASTGDGSIVVGSLDGKIRLYSSNSMRQA-KTAFP--GLGSPIRYVDVTYDGRWILGT 90 (244)
Q Consensus 35 ~vats~~G~IavGS~dG~IRLyD~~~~r~a-Kt~lp--glGdPI~~vdvS~DG~~lLaT 90 (244)
...++..|.|.+|+.||.+|.||..+++.. +..++ ..+.||+- ..||+-.++.
T Consensus 478 g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y---~~~G~qyv~~ 533 (599)
T 1w6s_A 478 GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTY---THKGTQYVAI 533 (599)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---EETTEEEEEE
T ss_pred cceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEE---EeCCEEEEEE
Confidence 334456678999999999999999887744 22233 34556554 4788755544
No 270
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=62.59 E-value=14 Score=32.83 Aligned_cols=65 Identities=15% Similarity=0.083 Sum_probs=41.1
Q ss_pred cee-EEEecCCCc-EEEeCCCCcEEEEeccccccceecCCCCCCCe--eEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 32 NFQ-CFASTGDGS-IVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPI--RYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 32 ~Ft-~vats~~G~-IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI--~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.|+ .+.++ .+. .++.+.+|.||.+|..+++..++. ++... .+|++..+--|++.--.+.+.+||.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME---RLGNIFAEGLASDGERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE---ECTTCCEEEEEECSSCEEEEESSSCEEEEEET
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE---CCCCcceeEEEEeCCEEEEEEccCCEEEEEEC
Confidence 353 44555 456 566777889999999988766654 44444 3466655544443222477888885
No 271
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=61.98 E-value=50 Score=28.32 Aligned_cols=64 Identities=11% Similarity=0.117 Sum_probs=41.5
Q ss_pred ceeEEEecCCCcE-EEeCCCCcEEEEec--cccccceecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEE
Q 044877 32 NFQCFASTGDGSI-VVGSLDGKIRLYSS--NSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILI 98 (244)
Q Consensus 32 ~Ft~vats~~G~I-avGS~dG~IRLyD~--~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~ 98 (244)
.+.+++.+++|.+ ++|...+..|..|. .+-+... .+....+.+|.+++||+.++++....|++.
T Consensus 164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~---~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s 230 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN---RTTSRRLHNMGFTPDGRLWMIVNGGKIAFS 230 (327)
T ss_dssp CEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE---CCSSSCEEEEEECTTSCEEEEETTTEEEEE
T ss_pred ceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC---CCCCCccceeEECCCCCEEEEeCCceEEEe
Confidence 4778999998884 55554445555563 2211111 134568999999999998887766656554
No 272
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=61.97 E-value=18 Score=32.92 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=44.6
Q ss_pred CCceeEEEecCCCcEEEeCC------------------CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-
Q 044877 30 GTNFQCFASTGDGSIVVGSL------------------DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT- 90 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~------------------dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT- 90 (244)
-+...-++.+++|.+++++. .|.|--||. . ..+..+.++.-| .+|++||||++|..+
T Consensus 164 ~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~-~~~~~~~~l~~p-NGia~spDg~~lYvad 239 (355)
T 3sre_A 164 LPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N-DVRVVAEGFDFA-NGINISPDGKYVYIAE 239 (355)
T ss_dssp CSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T-CCEEEEEEESSE-EEEEECTTSSEEEEEE
T ss_pred CCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C-eEEEeecCCccc-CcceECCCCCEEEEEe
Confidence 34467888999999776654 245555565 2 344445555443 799999999988755
Q ss_pred C-CcceEEEEe
Q 044877 91 T-DTYLILICT 100 (244)
Q Consensus 91 ~-~~~L~L~dt 100 (244)
+ ...|..+|.
T Consensus 240 t~~~~I~~~~~ 250 (355)
T 3sre_A 240 LLAHKIHVYEK 250 (355)
T ss_dssp GGGTEEEEEEE
T ss_pred CCCCeEEEEEE
Confidence 4 366888875
No 273
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=60.24 E-value=1.1e+02 Score=29.37 Aligned_cols=125 Identities=13% Similarity=0.079 Sum_probs=71.5
Q ss_pred CCCc-EEEeCCCCcEEEEecccccccee-cCCC-C-CCCeeEEEeCCCCCEEEEeCCcceEEEEeeeccCCCCccccccc
Q 044877 40 GDGS-IVVGSLDGKIRLYSSNSMRQAKT-AFPG-L-GSPIRYVDVTYDGRWILGTTDTYLILICTLFTDKNGTTKTGFNG 115 (244)
Q Consensus 40 ~~G~-IavGS~dG~IRLyD~~~~r~aKt-~lpg-l-GdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~~~~~~~~~~GF~~ 115 (244)
.+|. |++. .++.||+-+......-|. .+|. + -+.|..+.+||+|++|+.-....|.++..- ++... ..+.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP--~~~~~---~~~~ 103 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVP--WGYSN---VEDV 103 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECC--TTCSC---CCCH
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEec--Ccccc---Cccc
Confidence 3444 5544 348999988752222232 2353 2 337899999999999998888888887742 11100 0110
Q ss_pred ccCCCCCcceeeeeCccchhhcCCccceeeeeeeeecCCCCcceEEEEeeCCeEEEEechh
Q 044877 116 RMGNKIAAPRLLKLTPLDSHLAGVNNKFHKAQFSWVTENGKQERHLVATVGKFSVIWNFQQ 176 (244)
Q Consensus 116 ~~~~~kp~pr~L~L~Pe~~~~~G~~~~Ft~akFn~~tg~~~~E~~IvtStG~fvvvWn~~k 176 (244)
.+ ..+..+|..+|.|.. ......-.++.|. +..-.+..++|=..+.-+-+||+.+
T Consensus 104 ~~-~~~~q~~ty~l~~~~---~~~~s~I~qVlWH--Pl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 104 SI-QDAFQIFHYSIDEEE---VGPKSSIKKVLFH--PKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HH-HHTTEEEEEEGGGCC-----CCCCEEEEEEC--TTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cc-ccccceeEEEcCCcc---cCCCCceeEEEec--cccCCCCeEEEEecCCEEEEEEccc
Confidence 11 233456777776632 1112222344444 5333345555666677899999998
No 274
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=59.14 E-value=20 Score=34.56 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=48.8
Q ss_pred CCceeEEEecCCC-c--EEEeCCCCcEEEEeccccccc-----eecCCCCCCCee-EEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGDG-S--IVVGSLDGKIRLYSSNSMRQA-----KTAFPGLGSPIR-YVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G-~--IavGS~dG~IRLyD~~~~r~a-----Kt~lpglGdPI~-~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
+..||+|+.+..+ + +.+|..+|.|.=.-......+ ...+..-|.||. .|.+++++.+|.+.+.+.|.-+..
T Consensus 399 ~~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kvpl 478 (539)
T 3al9_A 399 RDRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPV 478 (539)
T ss_dssp SSCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEES
T ss_pred ccceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEeccccceeeh
Confidence 4579999998844 3 899999998743322111111 112223478996 999999999999999887666564
No 275
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=58.58 E-value=59 Score=32.50 Aligned_cols=131 Identities=16% Similarity=0.118 Sum_probs=85.0
Q ss_pred eEEEecCCCc--EEEeCCCCcEEEEeccccc-----------cceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEE
Q 044877 34 QCFASTGDGS--IVVGSLDGKIRLYSSNSMR-----------QAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILI 98 (244)
Q Consensus 34 t~vats~~G~--IavGS~dG~IRLyD~~~~r-----------~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~ 98 (244)
-.+-++|+|. ++.|-.+..+-+||..... .+...-|.+|--=.|..|.++| ..-.|. ++.+.-|
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEEEE
Confidence 4688999998 7788889999999986322 1222345688888999999999 554554 4779999
Q ss_pred EeeeccCCCCcccccccccCCCCCcceeeee----Cccchhh-c-------CC----ccceeeeeeeee-cCCCCcceEE
Q 044877 99 CTLFTDKNGTTKTGFNGRMGNKIAAPRLLKL----TPLDSHL-A-------GV----NNKFHKAQFSWV-TENGKQERHL 161 (244)
Q Consensus 99 dt~~~~~~~~~~~GF~~~~~~~kp~pr~L~L----~Pe~~~~-~-------G~----~~~Ft~akFn~~-tg~~~~E~~I 161 (244)
+..- -.+.+..++..|.+-+| .|-|.+. + |+ -++|++-||-.+ +...+.|++|
T Consensus 405 ni~~----------a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~Qli 474 (638)
T 3sbq_A 405 NMEE----------AVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLI 474 (638)
T ss_dssp EHHH----------HHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEE
T ss_pred eccH----------HHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeE
Confidence 8631 01111122233433222 5566533 1 22 258888888754 2334678888
Q ss_pred EEeeCCeEEEEech
Q 044877 162 VATVGKFSVIWNFQ 175 (244)
Q Consensus 162 vtStG~fvvvWn~~ 175 (244)
==|.++..++-|+-
T Consensus 475 dIsGdkM~lv~D~P 488 (638)
T 3sbq_A 475 DISGDEMKLVHDGP 488 (638)
T ss_dssp ECSSSSCEEEEEEE
T ss_pred ecCCCceEEEecCC
Confidence 88999888888764
No 276
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=57.98 E-value=19 Score=34.86 Aligned_cols=71 Identities=15% Similarity=0.177 Sum_probs=49.4
Q ss_pred CCCceeEEEecC-CCc--EEEeCCCCcEEEEecc-ccc---cceecCCCCCCCee-EEEeCCCCCEEEEeCCcceEEEEe
Q 044877 29 RGTNFQCFASTG-DGS--IVVGSLDGKIRLYSSN-SMR---QAKTAFPGLGSPIR-YVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 29 ~~~~Ft~vats~-~G~--IavGS~dG~IRLyD~~-~~r---~aKt~lpglGdPI~-~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
++..||+||.+. +|+ +.+|+.+|.|.=.-.. ... .....+ .-+.||. .|.++++..+|.+.+.+.|.=+..
T Consensus 385 ~~~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vpl 463 (528)
T 3ol2_B 385 PGIQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVPV 463 (528)
T ss_dssp TTCCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEES
T ss_pred cCCceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEEh
Confidence 356799999887 666 7799999998633321 111 011123 3578994 999999999999999877655554
No 277
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=57.45 E-value=24 Score=30.80 Aligned_cols=62 Identities=15% Similarity=0.066 Sum_probs=44.9
Q ss_pred CCcEEEeC-CCCcEEEEeccccccceec-CCCC-----------CCCeeEEEeCCCCCEEEEeCC--cceEEEEeee
Q 044877 41 DGSIVVGS-LDGKIRLYSSNSMRQAKTA-FPGL-----------GSPIRYVDVTYDGRWILGTTD--TYLILICTLF 102 (244)
Q Consensus 41 ~G~IavGS-~dG~IRLyD~~~~r~aKt~-lpgl-----------GdPI~~vdvS~DG~~lLaT~~--~~L~L~dt~~ 102 (244)
+|.|++.. .++.|..-|..+++..++. ++++ ++--.+|+++|||+.+.+|++ ..|..++...
T Consensus 161 dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 161 NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 67876665 5789999999887644422 2222 134589999999999999985 6688888654
No 278
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=56.89 E-value=12 Score=36.31 Aligned_cols=55 Identities=16% Similarity=0.271 Sum_probs=37.2
Q ss_pred EEEecCCCcEEEeCCCCcEEEEeccccccc-eecCC--CCCCCeeEEEeCCCCCEEEEeCC
Q 044877 35 CFASTGDGSIVVGSLDGKIRLYSSNSMRQA-KTAFP--GLGSPIRYVDVTYDGRWILGTTD 92 (244)
Q Consensus 35 ~vats~~G~IavGS~dG~IRLyD~~~~r~a-Kt~lp--glGdPI~~vdvS~DG~~lLaT~~ 92 (244)
...++..|.|++|+.||.++.||..+++.. +..++ ..+.|++. ..||+..++.|.
T Consensus 463 ~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~---~~~G~~yva~~~ 520 (668)
T 1kv9_A 463 GTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF---ELAGRQYVAIMA 520 (668)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE---EETTEEEEEEEE
T ss_pred ceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE---EECCEEEEEEEe
Confidence 344456677999999999999999877643 22233 13456654 478987767665
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=54.83 E-value=1e+02 Score=26.48 Aligned_cols=68 Identities=10% Similarity=0.153 Sum_probs=49.1
Q ss_pred CceeEEEecCCCc-E-EEeCCCCcEEEEecccccccee-cCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEe
Q 044877 31 TNFQCFASTGDGS-I-VVGSLDGKIRLYSSNSMRQAKT-AFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICT 100 (244)
Q Consensus 31 ~~Ft~vats~~G~-I-avGS~dG~IRLyD~~~~r~aKt-~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt 100 (244)
.+.+.++.++++. + |+...++.|-..|.. ++..++ .+.|.+ -..+|++.+||+++|+.- ...|.+++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~-D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVK-DLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCS-SEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCC-ChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4689999998654 4 568889999999996 443332 244554 478999999999887753 356777775
No 280
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=54.29 E-value=42 Score=32.00 Aligned_cols=68 Identities=9% Similarity=0.053 Sum_probs=44.5
Q ss_pred ceeEEEecCC----Cc---EEEeCCCCcEEEEec-cccc----cce----ecCCCCCCCeeEEEeCCCCCEEEEeCCcce
Q 044877 32 NFQCFASTGD----GS---IVVGSLDGKIRLYSS-NSMR----QAK----TAFPGLGSPIRYVDVTYDGRWILGTTDTYL 95 (244)
Q Consensus 32 ~Ft~vats~~----G~---IavGS~dG~IRLyD~-~~~r----~aK----t~lpglGdPI~~vdvS~DG~~lLaT~~~~L 95 (244)
.||+||.+.- |. +.+|..+|.|.=.=. .... .+. ..+...+.||..|.+++++++|.+.+.+.|
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 6899988863 44 899999997632221 1110 011 112225799999999999999999998775
Q ss_pred EEEE
Q 044877 96 ILIC 99 (244)
Q Consensus 96 ~L~d 99 (244)
.=+.
T Consensus 485 ~~vp 488 (495)
T 1q47_A 485 AQLP 488 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5444
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=53.71 E-value=26 Score=33.52 Aligned_cols=58 Identities=10% Similarity=0.139 Sum_probs=42.0
Q ss_pred eEEEecC--CCcEEEeCCC-CcEEEEeccccccceecCCCCC----CCeeEEEe-------CCCCCEEEEeCCc
Q 044877 34 QCFASTG--DGSIVVGSLD-GKIRLYSSNSMRQAKTAFPGLG----SPIRYVDV-------TYDGRWILGTTDT 93 (244)
Q Consensus 34 t~vats~--~G~IavGS~d-G~IRLyD~~~~r~aKt~lpglG----dPI~~vdv-------S~DG~~lLaT~~~ 93 (244)
..++++| +++|++.... +.||+.|..+. ...++++ .+ ....+|++ ++||++|+++...
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~-~v~~l~~-~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNR-MLSSPLN-INTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTT-EEEEEEC-CTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCC-EEEEEEc-cCccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 4788997 4667766654 77999998654 3555554 33 24789999 9999988888754
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=53.40 E-value=23 Score=32.44 Aligned_cols=67 Identities=15% Similarity=0.017 Sum_probs=45.8
Q ss_pred eeEEEecCCCcEEE-eCCC-CcEEEEeccccccceecC---C--CCCCCeeEEEeCCCCCEEEEeCC-cceEEEEe
Q 044877 33 FQCFASTGDGSIVV-GSLD-GKIRLYSSNSMRQAKTAF---P--GLGSPIRYVDVTYDGRWILGTTD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~~G~Iav-GS~d-G~IRLyD~~~~r~aKt~l---p--glGdPI~~vdvS~DG~~lLaT~~-~~L~L~dt 100 (244)
+.-++.+++|.+++ ++.- +.|-.+|.-+. .+.... | .-.--.++|.++|||+.||++-. ..|.-+|.
T Consensus 139 ~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp EEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred CceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 66899999999776 8888 88888887543 222211 1 11112679999999999987743 44777774
No 283
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=51.99 E-value=16 Score=32.23 Aligned_cols=60 Identities=15% Similarity=0.040 Sum_probs=42.7
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEecccccc------ceecCCCCCCCeeEEEeCCCCCEEEEeCCcc
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQ------AKTAFPGLGSPIRYVDVTYDGRWILGTTDTY 94 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~------aKt~lpglGdPI~~vdvS~DG~~lLaT~~~~ 94 (244)
|.++.++++|.++++ .||.|.-+|..+... +...-.+--..+..|.+.|||...+++ +..
T Consensus 90 F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~ 155 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQ 155 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTE
T ss_pred ceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCc
Confidence 789999999998888 669998888754211 111001111378999999999999888 655
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=50.31 E-value=44 Score=31.90 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=41.7
Q ss_pred eEEEecC-CCcEEE-eCCCCcEEEEecc-------cccc-----------cee--cCCCCCCCeeEEEeCCCCCEEE-Ee
Q 044877 34 QCFASTG-DGSIVV-GSLDGKIRLYSSN-------SMRQ-----------AKT--AFPGLGSPIRYVDVTYDGRWIL-GT 90 (244)
Q Consensus 34 t~vats~-~G~Iav-GS~dG~IRLyD~~-------~~r~-----------aKt--~lpglGdPI~~vdvS~DG~~lL-aT 90 (244)
.+++.++ +|.|++ -..+|.|..||.. ++.. .+. .++. +..-.+|+++|||++|. |-
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~-~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD-PSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS-SSCCEEEEECTTSSEEEEEE
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC-CCCceEEEEcCCCCEEEEEe
Confidence 4678888 677654 5567779999985 3321 001 1222 23347999999999543 44
Q ss_pred CC-cceEEEEe
Q 044877 91 TD-TYLILICT 100 (244)
Q Consensus 91 ~~-~~L~L~dt 100 (244)
+. ..|+.+|.
T Consensus 329 ~~~h~I~kid~ 339 (496)
T 3kya_A 329 INNHYFMRSDY 339 (496)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEec
Confidence 54 66888764
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=49.64 E-value=32 Score=31.82 Aligned_cols=57 Identities=16% Similarity=0.042 Sum_probs=37.3
Q ss_pred eeEEEecCCCcEEEeCCCC-cEEEEecccccccee--cCCCC------CCCeeEEEeCCC----CCEEEEe
Q 044877 33 FQCFASTGDGSIVVGSLDG-KIRLYSSNSMRQAKT--AFPGL------GSPIRYVDVTYD----GRWILGT 90 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG-~IRLyD~~~~r~aKt--~lpgl------GdPI~~vdvS~D----G~~lLaT 90 (244)
=.++++.++|.|.++...| .|++++..+++ +.+ .++.. ..-..+|+++|| |...++.
T Consensus 29 P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~ 98 (454)
T 1cru_A 29 PHALLWGPDNQIWLTERATGKILRVNPESGS-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISG 98 (454)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCC-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEE
T ss_pred ceEEEEcCCCcEEEEEcCCCEEEEEECCCCc-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEE
Confidence 3689999999998888886 69999864332 221 23321 234569999995 4444444
No 286
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=49.03 E-value=67 Score=27.68 Aligned_cols=63 Identities=6% Similarity=0.031 Sum_probs=44.5
Q ss_pred CceeEEEecC-CCc-EEEeCCCCcEEEEeccccccceecCC-CCC------CCeeEEEeCCCCCEEEEeCCc
Q 044877 31 TNFQCFASTG-DGS-IVVGSLDGKIRLYSSNSMRQAKTAFP-GLG------SPIRYVDVTYDGRWILGTTDT 93 (244)
Q Consensus 31 ~~Ft~vats~-~G~-IavGS~dG~IRLyD~~~~r~aKt~lp-glG------dPI~~vdvS~DG~~lLaT~~~ 93 (244)
.++++++.+| .|+ .++.+....+-.+|..+.-.....|+ ++. .-=.+|++.+||+..+++=.|
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n 244 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPN 244 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCc
Confidence 4689999999 777 67888888899999865422322333 321 245899999999966664446
No 287
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=47.96 E-value=12 Score=36.40 Aligned_cols=50 Identities=16% Similarity=0.220 Sum_probs=32.2
Q ss_pred CCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEE-EeCCcceEEEEee
Q 044877 50 DGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWIL-GTTDTYLILICTL 101 (244)
Q Consensus 50 dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lL-aT~~~~L~L~dt~ 101 (244)
+|.|+.||..+++..- .++ ++.|+.+-.++..|..|. ++.+.+|+.||..
T Consensus 454 ~g~l~A~D~~tG~~~W-~~~-~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAW-EVP-YVTIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEEEEEEETTTTEEEE-EEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ceeEEEEECCCCCeEe-Ecc-CCCCccCccceECCCEEEEECCCCcEEEEECC
Confidence 4889999998876443 233 455555544444444454 4446889999973
No 288
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=45.89 E-value=79 Score=30.19 Aligned_cols=70 Identities=9% Similarity=0.062 Sum_probs=49.4
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccccceecC-CC----CCCCeeEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAF-PG----LGSPIRYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~l-pg----lGdPI~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+.+.|+..+.+|.|-+|+. |=|-.||..+.+...-.. +. -...|.+|...++|+..++|....|.++|.
T Consensus 372 ~~~v~~i~~d~~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~ 446 (758)
T 3ott_A 372 HNRIRHIYEDKEQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDK 446 (758)
T ss_dssp CSCEEEEEECTTSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEH
T ss_pred CCceEEEEECCCCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcc
Confidence 34578999999999999985 457778876543221111 11 134688999999999888887778888874
No 289
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=45.70 E-value=51 Score=29.82 Aligned_cols=50 Identities=18% Similarity=0.262 Sum_probs=34.8
Q ss_pred eEEEecCCCcEEEeCC-CCcEEEEeccccccc-eecCCCC----CCCeeEEEeCCC
Q 044877 34 QCFASTGDGSIVVGSL-DGKIRLYSSNSMRQA-KTAFPGL----GSPIRYVDVTYD 83 (244)
Q Consensus 34 t~vats~~G~IavGS~-dG~IRLyD~~~~r~a-Kt~lpgl----GdPI~~vdvS~D 83 (244)
..+++.++|.|.+... .|.|++++..+++.. -..+|.+ ..-..+|+++||
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pd 90 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPD 90 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTT
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccc
Confidence 6899999999888887 999999986443321 1113321 234589999996
No 290
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=42.61 E-value=72 Score=31.74 Aligned_cols=71 Identities=10% Similarity=0.125 Sum_probs=45.7
Q ss_pred CCceeEEEec----CCCc---EEEeCCCCcEE-EEe--ccccccce------ecCCCCCCCeeEEEeCCCCCEEEEeCCc
Q 044877 30 GTNFQCFAST----GDGS---IVVGSLDGKIR-LYS--SNSMRQAK------TAFPGLGSPIRYVDVTYDGRWILGTTDT 93 (244)
Q Consensus 30 ~~~Ft~vats----~~G~---IavGS~dG~IR-LyD--~~~~r~aK------t~lpglGdPI~~vdvS~DG~~lLaT~~~ 93 (244)
+..||+||++ .+|. +.+|..+|.|. +.- ........ ..+-.-+.||..|.+++++++|.+.+.+
T Consensus 411 ~~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~ 490 (667)
T 4gz8_A 411 NYQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTA 490 (667)
T ss_dssp SCCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSS
T ss_pred ccceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECC
Confidence 3468999874 4554 78999999984 221 11100000 0112368899999999999999999887
Q ss_pred ceEEEEe
Q 044877 94 YLILICT 100 (244)
Q Consensus 94 ~L~L~dt 100 (244)
.|.=+..
T Consensus 491 ~V~kVPl 497 (667)
T 4gz8_A 491 GVAQLPL 497 (667)
T ss_dssp CEEEEES
T ss_pred EEEEEEh
Confidence 7555454
No 291
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=41.57 E-value=24 Score=31.28 Aligned_cols=55 Identities=13% Similarity=0.034 Sum_probs=37.8
Q ss_pred cEEE-eCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC-CcceEEEEee
Q 044877 43 SIVV-GSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT-DTYLILICTL 101 (244)
Q Consensus 43 ~Iav-GS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~-~~~L~L~dt~ 101 (244)
.|++ .-.++.+.+||..+.+..++ +|--+. +..+++||++|..+. .+.|.++|+.
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~t-i~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~ 163 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERT-TRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPD 163 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEE-EECSSC---CCCEEEETTEEEEECSSSEEEEECTT
T ss_pred EEEEEEccCCEEEEEECCcCcEEEE-EeCCCc---eeEEecCCCEEEEECCCCEEEEEcCC
Confidence 4544 44689999999988765553 443222 355668999888776 5779999963
No 292
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=40.96 E-value=86 Score=30.82 Aligned_cols=72 Identities=11% Similarity=0.058 Sum_probs=47.4
Q ss_pred CCCceeEEEec----CCC--c--EEEeCCCCcEEEEecc-cccc--c----eecCCCCCCCeeEEEeCCCCCEEEEeCCc
Q 044877 29 RGTNFQCFAST----GDG--S--IVVGSLDGKIRLYSSN-SMRQ--A----KTAFPGLGSPIRYVDVTYDGRWILGTTDT 93 (244)
Q Consensus 29 ~~~~Ft~vats----~~G--~--IavGS~dG~IRLyD~~-~~r~--a----Kt~lpglGdPI~~vdvS~DG~~lLaT~~~ 93 (244)
++..||.||++ .+| + +.+|+.+|.|.=.=.. .... . ...+..-+.||..|.++++..+|.+.+.+
T Consensus 360 ~~~~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~ 439 (590)
T 3nvq_A 360 SKYHYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQW 439 (590)
T ss_dssp ESSCEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSS
T ss_pred cCCcEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecc
Confidence 46679999865 344 2 7899999998632221 1100 1 01111347899999999999999999887
Q ss_pred ceEEEEe
Q 044877 94 YLILICT 100 (244)
Q Consensus 94 ~L~L~dt 100 (244)
.|.=+..
T Consensus 440 ~V~qVPl 446 (590)
T 3nvq_A 440 EVSQVPL 446 (590)
T ss_dssp EEEEEET
T ss_pred eEEEcch
Confidence 7655554
No 293
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=39.77 E-value=31 Score=30.35 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=42.8
Q ss_pred ceeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCC--------eeEEEeCCCCCEEEEeCCcceEEEE
Q 044877 32 NFQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSP--------IRYVDVTYDGRWILGTTDTYLILIC 99 (244)
Q Consensus 32 ~Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdP--------I~~vdvS~DG~~lLaT~~~~L~L~d 99 (244)
+|+.+|++|+|.|++. .+|.+.-.|..+.. ....+ +..-- -..+-+-+||...++ ++..|.-++
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~-~~~W~-~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHD-NDNWM-GRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCST-TCCHH-HHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEES
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCC-ccccc-ccccEecccccccceEEEECCCCCEEEe-CCCEEEEeC
Confidence 7889999999998777 88887777764311 11111 11222 377888899999988 666665555
No 294
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.06 E-value=92 Score=32.18 Aligned_cols=92 Identities=11% Similarity=0.031 Sum_probs=54.8
Q ss_pred ecc---cccccCCCCceeEEEecCCCcEEEeCCC-CcEEE-Eecccc-------------ccceecCC------CCC--C
Q 044877 20 NWS---QGHQFSRGTNFQCFASTGDGSIVVGSLD-GKIRL-YSSNSM-------------RQAKTAFP------GLG--S 73 (244)
Q Consensus 20 ~~~---~~k~Y~~~~~Ft~vats~~G~IavGS~d-G~IRL-yD~~~~-------------r~aKt~lp------glG--d 73 (244)
+|+ ....+.-+.|+--+|.+++ .++++-.| |.+|| ++.... .-.+-++| ..+ .
T Consensus 160 ~W~k~~~P~~f~~r~Ph~L~avs~~-~lvVsL~DGgLLrL~r~~~d~~~~~~~f~~~s~l~sL~~l~~~~~~~~~~~~~~ 238 (1139)
T 4fhn_B 160 DWCLCYRPISFLNQKPDLMAAISTS-EICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPN 238 (1139)
T ss_dssp CCBCCBCCSCTTTSCEEEEEECCSS-EEEEEETTSCEEEEEEETTEEEEEEEC---------------------CCCCTT
T ss_pred ccceeccCCCccCCCceEEEEEcCC-cEEEEECCCCEEEEEecCCCCCCceeeecCCcHHhhhhhhcccccCCccCCCcc
Confidence 565 4555677778888999887 66666666 56676 222110 01111233 122 2
Q ss_pred CeeEEEeCCCCCEEEEeCC-cceEEEEeeeccCCCCcccccccccC
Q 044877 74 PIRYVDVTYDGRWILGTTD-TYLILICTLFTDKNGTTKTGFNGRMG 118 (244)
Q Consensus 74 PI~~vdvS~DG~~lLaT~~-~~L~L~dt~~~~~~~~~~~GF~~~~~ 118 (244)
.|.++..++|.++|.+-|. ..||+|+.. .+++-++.-|.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~------t~~~v~t~DL~ 278 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLS------TNQCVETIELS 278 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETT------TTEEEEEEECC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECC------CCCeEEeechh
Confidence 4566677899999999996 669999963 23445554443
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=37.85 E-value=1.2e+02 Score=27.69 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=40.9
Q ss_pred eEEEecC-CCcEEEeC-CCCcEEEEeccccccceecCCCC---CCC---eeEEEe---CCCCCEEEE
Q 044877 34 QCFASTG-DGSIVVGS-LDGKIRLYSSNSMRQAKTAFPGL---GSP---IRYVDV---TYDGRWILG 89 (244)
Q Consensus 34 t~vats~-~G~IavGS-~dG~IRLyD~~~~r~aKt~lpgl---GdP---I~~vdv---S~DG~~lLa 89 (244)
.|++.++ +|.+.+|+ ..|.|-.||..+.....+.+|++ |+| +.+|.+ =|+|+.+++
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv 82 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAV 82 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEE
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEE
Confidence 5777877 66688888 68999999986544455567764 554 578999 488877764
No 296
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=37.42 E-value=1.1e+02 Score=26.89 Aligned_cols=62 Identities=11% Similarity=0.108 Sum_probs=44.5
Q ss_pred CCcEEEeC-CCCcEEEEecccccccee-cCCCC----------CCCeeEEEeCCCCCEEEEeCCcceEEEEeee
Q 044877 41 DGSIVVGS-LDGKIRLYSSNSMRQAKT-AFPGL----------GSPIRYVDVTYDGRWILGTTDTYLILICTLF 102 (244)
Q Consensus 41 ~G~IavGS-~dG~IRLyD~~~~r~aKt-~lpgl----------GdPI~~vdvS~DG~~lLaT~~~~L~L~dt~~ 102 (244)
+|.|.+.. .++.|..-|..+++...+ -+++| ++--.+|+++|+++.|..|++.-=.|+..++
T Consensus 181 ~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 181 DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 67877666 588899999887763321 12222 3556899999999999999987766666655
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=36.22 E-value=84 Score=30.20 Aligned_cols=70 Identities=14% Similarity=0.249 Sum_probs=46.2
Q ss_pred CceeEEEecCC-CcEEEeCCCCc-------------------EEEEeccccccce-ecCCC-------CCCCeeEEEeCC
Q 044877 31 TNFQCFASTGD-GSIVVGSLDGK-------------------IRLYSSNSMRQAK-TAFPG-------LGSPIRYVDVTY 82 (244)
Q Consensus 31 ~~Ft~vats~~-G~IavGS~dG~-------------------IRLyD~~~~r~aK-t~lpg-------lGdPI~~vdvS~ 82 (244)
+...+++.+++ |.|++|+.+|. |..+|..+++..= ..... ...|..-.++..
T Consensus 230 ~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~ 309 (668)
T 1kv9_A 230 TVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNI 309 (668)
T ss_dssp CCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEE
T ss_pred ccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEecc
Confidence 34567888885 45899998874 9999998776331 11111 225666677778
Q ss_pred CCC---EEEEeC-CcceEEEEe
Q 044877 83 DGR---WILGTT-DTYLILICT 100 (244)
Q Consensus 83 DG~---~lLaT~-~~~L~L~dt 100 (244)
||+ .|+..+ +.+|..+|.
T Consensus 310 ~G~~~~~v~~~~~~G~l~~lD~ 331 (668)
T 1kv9_A 310 DGKPRKVLMQAPKNGFFYVLDR 331 (668)
T ss_dssp TTEEEEEEEECCTTSEEEEEET
T ss_pred CCcEEEEEEEECCCCEEEEEEC
Confidence 997 455555 467888885
No 298
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=35.61 E-value=1.5e+02 Score=25.05 Aligned_cols=66 Identities=8% Similarity=-0.031 Sum_probs=40.9
Q ss_pred eeEEEecC-CCcEEEeCCC--CcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEe-CC-cceEEEEe
Q 044877 33 FQCFASTG-DGSIVVGSLD--GKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGT-TD-TYLILICT 100 (244)
Q Consensus 33 Ft~vats~-~G~IavGS~d--G~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT-~~-~~L~L~dt 100 (244)
-..+|++| .|.|+..... +.|..+|.-+. ..+.+.. ++. --.+|++++++..|..+ .. ..|..+|.
T Consensus 122 P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~-~P~gla~d~~~~~lY~~D~~~~~I~~~d~ 193 (316)
T 1ijq_A 122 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQ-WPNGITLDLLSGRLYWVDSKLHSISSIDV 193 (316)
T ss_dssp EEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCS-CEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred cceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCC-CceEEEEeccCCEEEEEECCCCeEEEEec
Confidence 35778887 6666655442 67888876432 2333322 333 34799999988777644 43 56888874
No 299
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=34.23 E-value=98 Score=28.85 Aligned_cols=56 Identities=13% Similarity=0.247 Sum_probs=36.7
Q ss_pred eEEEecCCCc--EEEeCCCCcEEEEeccccccce--ecCC-----CC----CCCeeEEEeCCC----CCEEEE
Q 044877 34 QCFASTGDGS--IVVGSLDGKIRLYSSNSMRQAK--TAFP-----GL----GSPIRYVDVTYD----GRWILG 89 (244)
Q Consensus 34 t~vats~~G~--IavGS~dG~IRLyD~~~~r~aK--t~lp-----gl----GdPI~~vdvS~D----G~~lLa 89 (244)
.++++.|+|. |.+....|.||++|..+..... .-+| ++ -.-..+|++.|| |...|+
T Consensus 17 ~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~ 89 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVS 89 (463)
T ss_dssp EEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEE
T ss_pred eEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEE
Confidence 6889999995 9999999999999863321111 1122 10 134578999997 555554
No 300
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=33.96 E-value=1e+02 Score=26.66 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=37.6
Q ss_pred EEEecCCCcEEEe-CCCC--cEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeC--CcceEEEEe
Q 044877 35 CFASTGDGSIVVG-SLDG--KIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTT--DTYLILICT 100 (244)
Q Consensus 35 ~vats~~G~IavG-S~dG--~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~--~~~L~L~dt 100 (244)
.+.+++ |.++.+ +.+| .||.+|..+++..++ ++ ++...-+.-++.+|..|-..+ .+.+.++|.
T Consensus 25 GL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~-~~-l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~ 92 (243)
T 3mbr_X 25 GLFYLR-GHLYESTGETGRSSVRKVDLETGRILQR-AE-VPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDL 92 (243)
T ss_dssp EEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEE-EE-CCTTCCEEEEEEETTEEEEEESSSSEEEEEET
T ss_pred cEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEE-Ee-CCCCcceeEEEEeCCEEEEEEeeCCEEEEEEC
Confidence 455555 675444 4444 899999988875543 33 455554444444455444333 466888886
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=33.62 E-value=74 Score=30.49 Aligned_cols=60 Identities=15% Similarity=0.159 Sum_probs=42.8
Q ss_pred CCceeEEEecCCC----cEEEeCCCCcEEEEeccccc----cceecCCCCC-----CCeeEEEeCCCCCEEEE
Q 044877 30 GTNFQCFASTGDG----SIVVGSLDGKIRLYSSNSMR----QAKTAFPGLG-----SPIRYVDVTYDGRWILG 89 (244)
Q Consensus 30 ~~~Ft~vats~~G----~IavGS~dG~IRLyD~~~~r----~aKt~lpglG-----dPI~~vdvS~DG~~lLa 89 (244)
.-+...|-.+|-| +|++=..|+.||+||....- -.+.....+| ..|.+++|..+|-.|-+
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEE
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEE
Confidence 4568889999943 49999999999999996310 0111223345 78999999999876655
No 302
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=33.37 E-value=1.1e+02 Score=26.08 Aligned_cols=64 Identities=16% Similarity=0.035 Sum_probs=42.4
Q ss_pred eEEEecC-CCcEEEe-CCCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeCC---cceEEEE
Q 044877 34 QCFASTG-DGSIVVG-SLDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTTD---TYLILIC 99 (244)
Q Consensus 34 t~vats~-~G~IavG-S~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~~---~~L~L~d 99 (244)
..+|.++ .|.|++. +..+.|..+|..+. ..+++++ ++.. -.+|++.|++.+|..+.. ..|..++
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~-~~~~~~~~~~~~-P~~iavdp~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGV-KRKTLFRENGSK-PRAIVVDPVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSS-SEEEEEECTTCC-EEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCC-ceEEEEECCCCC-cceEEeCCCCCEEEEEccCCCCeEEEEc
Confidence 5788885 5667655 66789999998543 3444554 4444 489999998776665542 3465555
No 303
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=32.00 E-value=2.1e+02 Score=29.10 Aligned_cols=89 Identities=11% Similarity=-0.008 Sum_probs=52.7
Q ss_pred cccccCCCCceeEEEecCCCcEEEeCCCCc-EEE-Eeccc-------------cccceecCC------CCCC--CeeEEE
Q 044877 23 QGHQFSRGTNFQCFASTGDGSIVVGSLDGK-IRL-YSSNS-------------MRQAKTAFP------GLGS--PIRYVD 79 (244)
Q Consensus 23 ~~k~Y~~~~~Ft~vats~~G~IavGS~dG~-IRL-yD~~~-------------~r~aKt~lp------glGd--PI~~vd 79 (244)
....+.-+.++.-+|.+++ .++++-.||- +|| ++... ....+-++| ..++ .|.++.
T Consensus 164 ~p~~f~~r~p~~l~av~~~-~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~ 242 (950)
T 4gq2_M 164 RPISFLNQKPDLMAAISTS-EICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMI 242 (950)
T ss_dssp CCGGGTTSCEEEEEECSSS-EEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEE
T ss_pred cCcCccCCCceEEEEEcCC-eEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEe
Confidence 3445566778889999987 6666666654 566 22110 001122233 1222 467778
Q ss_pred eCCCCCEEEEeCC-cceEEEEeeeccCCCCcccccccccC
Q 044877 80 VTYDGRWILGTTD-TYLILICTLFTDKNGTTKTGFNGRMG 118 (244)
Q Consensus 80 vS~DG~~lLaT~~-~~L~L~dt~~~~~~~~~~~GF~~~~~ 118 (244)
.++|..+|.+=|. ..||+|+.. .++..++.-+.
T Consensus 243 ~~~~~~~lftl~~D~~LRiWsl~------t~~~v~t~dL~ 276 (950)
T 4gq2_M 243 FLSTYNVLVMLSLDYKLKVLDLS------TNQCVETIELS 276 (950)
T ss_dssp EETTTTEEEEEETTCEEEEEETT------TTEEEEEEECC
T ss_pred ecCCCcEEEEEECCCEEEEEECC------CCCeEeeeccc
Confidence 8899999999996 669999963 34455555443
No 304
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=31.04 E-value=47 Score=33.17 Aligned_cols=71 Identities=17% Similarity=0.241 Sum_probs=46.9
Q ss_pred CCceeEEEecCC-Cc--EEEeCCCCcEEEEecccccc-c---ee-cCCCCCCCe-eEEEeCCCCCEEEEeCCcceEEEEe
Q 044877 30 GTNFQCFASTGD-GS--IVVGSLDGKIRLYSSNSMRQ-A---KT-AFPGLGSPI-RYVDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 30 ~~~Ft~vats~~-G~--IavGS~dG~IRLyD~~~~r~-a---Kt-~lpglGdPI-~~vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
+..||+||.+.. ++ +.+|+.+|.|.=.-...... + .+ .+-.-+.|| ..|.++++..+|.+.+.+.|.=+..
T Consensus 398 ~~~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qvPl 477 (681)
T 3oky_A 398 RDRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRVPV 477 (681)
T ss_dssp SSCBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEEES
T ss_pred CcceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEEEh
Confidence 457899998873 34 78999999986433221110 1 11 122257898 6999999999999988876544443
No 305
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=30.25 E-value=1e+02 Score=29.00 Aligned_cols=71 Identities=15% Similarity=0.159 Sum_probs=43.8
Q ss_pred CCCCceeEEEecCC-Cc--EEEeCCCCcEEEEeccccccc-----eecCCCCCCCeeEEEeCCCCCEEEEeCCcceEEEE
Q 044877 28 SRGTNFQCFASTGD-GS--IVVGSLDGKIRLYSSNSMRQA-----KTAFPGLGSPIRYVDVTYDGRWILGTTDTYLILIC 99 (244)
Q Consensus 28 ~~~~~Ft~vats~~-G~--IavGS~dG~IRLyD~~~~r~a-----Kt~lpglGdPI~~vdvS~DG~~lLaT~~~~L~L~d 99 (244)
..+..||+||.+.. ++ +.+|..+|.|.=.-......+ ...+...|.||. .+++.++.+|++.+.+.|.-+.
T Consensus 402 ~~~~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~-~~l~~~~~~Lyv~s~~~V~~vp 480 (527)
T 4fww_A 402 LGPVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQ-RDVSRLGDHLLFASGDQVFQVP 480 (527)
T ss_dssp TTTCCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBC-SCCEEETTEEEEEETTEEEEEE
T ss_pred CCceEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceee-hhcccCCCEEEEEECCEEEEEe
Confidence 45677999999994 44 789999998754332111111 111233677875 3556666788777776654444
No 306
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=28.05 E-value=2.2e+02 Score=25.27 Aligned_cols=65 Identities=9% Similarity=0.007 Sum_probs=0.0
Q ss_pred eEEEecC-CCcEEEeCCC--CcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEeCC--cceEEEE
Q 044877 34 QCFASTG-DGSIVVGSLD--GKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGTTD--TYLILIC 99 (244)
Q Consensus 34 t~vats~-~G~IavGS~d--G~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT~~--~~L~L~d 99 (244)
..+|++| .|.|+..... +.|..+|.-+.......-.++..| .+|+++++++.|..+-. ..|..+|
T Consensus 205 ~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P-~glavd~~~~~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 205 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSID 274 (400)
T ss_dssp EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCE-EEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCce-EEEEEEeCCCEEEEEECCCCEEEEEe
No 307
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.47 E-value=2.1e+02 Score=24.74 Aligned_cols=32 Identities=9% Similarity=0.246 Sum_probs=21.5
Q ss_pred ecccccccCCCCceeEEEecC--CCcEEEeCCCC
Q 044877 20 NWSQGHQFSRGTNFQCFASTG--DGSIVVGSLDG 51 (244)
Q Consensus 20 ~~~~~k~Y~~~~~Ft~vats~--~G~IavGS~dG 51 (244)
+|......-....+.+++.++ .+.|.+|...|
T Consensus 44 ~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 44 TWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp SEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 555432223456799999998 67788887776
No 308
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=27.15 E-value=69 Score=28.00 Aligned_cols=59 Identities=10% Similarity=-0.041 Sum_probs=36.8
Q ss_pred ceeEEEecCC----CcEEEeCCC------CcEEEEeccccc--ccee---cCC---CCCCCeeEEEeCCCCCEEEEe
Q 044877 32 NFQCFASTGD----GSIVVGSLD------GKIRLYSSNSMR--QAKT---AFP---GLGSPIRYVDVTYDGRWILGT 90 (244)
Q Consensus 32 ~Ft~vats~~----G~IavGS~d------G~IRLyD~~~~r--~aKt---~lp---glGdPI~~vdvS~DG~~lLaT 90 (244)
--..+|++++ |.|++.... +.|..|+....+ ..++ .+| +-.+--.+|.+.|||...+++
T Consensus 76 ~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 76 GLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp SEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 4678999997 777776553 667777764321 1112 244 222233789999999766665
No 309
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=27.02 E-value=53 Score=31.07 Aligned_cols=50 Identities=20% Similarity=0.015 Sum_probs=31.3
Q ss_pred CCCcEEEEeccccccceecCCCCCCCeeEEE-eCCCCCEEEEeCCcceEEEEe
Q 044877 49 LDGKIRLYSSNSMRQAKTAFPGLGSPIRYVD-VTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 49 ~dG~IRLyD~~~~r~aKt~lpglGdPI~~vd-vS~DG~~lLaT~~~~L~L~dt 100 (244)
.+|.|..||..+++..-+ ++ ++.++.+.. ++.+|.-++++.+.+|..||.
T Consensus 442 ~~g~l~a~D~~tG~~~W~-~~-~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWT-KW-EKFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp CCEEEEEECTTTCCEEEE-EE-ESSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred CCCeEEEEECCCCCEEEE-ec-CCCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 468999999987764322 22 334444433 445666555555688999996
No 310
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=25.94 E-value=2.7e+02 Score=26.21 Aligned_cols=64 Identities=20% Similarity=0.173 Sum_probs=40.2
Q ss_pred EEEecCCCc-EEEeC-CCCcEEEEeccccccceecCCCCCCCe--eEEEeCCCCCEEEEeC--C-----cceEEEEe
Q 044877 35 CFASTGDGS-IVVGS-LDGKIRLYSSNSMRQAKTAFPGLGSPI--RYVDVTYDGRWILGTT--D-----TYLILICT 100 (244)
Q Consensus 35 ~vats~~G~-IavGS-~dG~IRLyD~~~~r~aKt~lpglGdPI--~~vdvS~DG~~lLaT~--~-----~~L~L~dt 100 (244)
++++..+|. +++|+ .++++++||..+.+-. .++.+..|= -++.+.+||+.++..- . +.+.+||.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~--~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI--PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEE--ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEET
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCcee--ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCC
Confidence 467778888 56676 4568999998654322 233343332 2355667999887653 1 45777775
No 311
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=25.54 E-value=1.8e+02 Score=25.24 Aligned_cols=64 Identities=14% Similarity=0.004 Sum_probs=40.5
Q ss_pred eEEEecC-CCcEEE-eCCCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeCC---cceEEEE
Q 044877 34 QCFASTG-DGSIVV-GSLDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTTD---TYLILIC 99 (244)
Q Consensus 34 t~vats~-~G~Iav-GS~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~~---~~L~L~d 99 (244)
..+|.++ .|.|+. -+..+.|..+|..+.. .++++. ++..| .+|++.|++.+|..|-. ..|..++
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~l~~P-~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RKVLLWQSLEKP-RAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCSCE-EEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eEEEEeCCCCCc-ceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 4678886 566644 4557889999975532 333443 44444 89999997777765532 3465555
No 312
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=24.80 E-value=2.4e+02 Score=24.70 Aligned_cols=64 Identities=9% Similarity=0.038 Sum_probs=42.4
Q ss_pred eeEEEecCCCcEEEeCCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-CC-cceEEEE
Q 044877 33 FQCFASTGDGSIVVGSLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-TD-TYLILIC 99 (244)
Q Consensus 33 Ft~vats~~G~IavGS~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~~-~~L~L~d 99 (244)
-+|.+..+++.++.+.. ..||.+|..+.. ...+++++.. +.+|++.+++..|..+ .. ..|..++
T Consensus 79 ~~C~~~~~~~~l~~~~~-~~I~~i~~~~~~-~~~~~~~~~~-~~gl~~d~~~~~ly~~D~~~~~I~r~~ 144 (386)
T 3v65_B 79 RSCKALGPEPVLLFANR-IDIRQVLPHRSE-YTLLLNNLEN-AIALDFHHRRELVFWSDVTLDRILRAN 144 (386)
T ss_dssp SCEEECSSCCEEEEECB-SCEEEECTTSCC-CEEEECSCSC-EEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CeECCccccceeEeecC-ccceeeccCCCc-EEEEecCCCc-cEEEEEecCCCeEEEEeCCCCcEEEEe
Confidence 46888888777665544 679999986543 3445566665 5799999766666544 33 5566665
No 313
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=24.28 E-value=3.4e+02 Score=23.33 Aligned_cols=91 Identities=14% Similarity=0.116 Sum_probs=53.4
Q ss_pred eeEEEecC-CCcEEEe-CCCCcEEEEeccccccceecCCCCCCCeeEEEeCCCCCEEEEe-C-CcceEEEEeeeccCCCC
Q 044877 33 FQCFASTG-DGSIVVG-SLDGKIRLYSSNSMRQAKTAFPGLGSPIRYVDVTYDGRWILGT-T-DTYLILICTLFTDKNGT 108 (244)
Q Consensus 33 Ft~vats~-~G~IavG-S~dG~IRLyD~~~~r~aKt~lpglGdPI~~vdvS~DG~~lLaT-~-~~~L~L~dt~~~~~~~~ 108 (244)
-.+++.++ +|.|+.. ...+.|+.++..+.........++..| .+|++.+.+..|..+ . .+.|..++. ++..
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~ly~~d~~~~~I~~~~~---dG~~- 149 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSGTSRIEVANL---DGAH- 149 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC-CEEEEETTTTEEEEEETTTTEEEEEET---TSCS-
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCc-cEEEEecCCCeEEEEcCCCCeEEEEcC---CCCc-
Confidence 36778885 6666655 467889999886543222222455555 799999866666544 3 356877774 2221
Q ss_pred cccccccccC-CCCCcceeeeeCccc
Q 044877 109 TKTGFNGRMG-NKIAAPRLLKLTPLD 133 (244)
Q Consensus 109 ~~~GF~~~~~-~~kp~pr~L~L~Pe~ 133 (244)
...+. .....|+-|.+.|.+
T Consensus 150 -----~~~l~~~~l~~P~~iavdp~~ 170 (349)
T 3v64_C 150 -----RKVLLWQSLEKPRAIALHPME 170 (349)
T ss_dssp -----CEEEECTTCSCEEEEEEETTT
T ss_pred -----eEEEEeCCCCCcceEEEecCc
Confidence 11111 223457777777744
No 314
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=24.00 E-value=69 Score=31.21 Aligned_cols=64 Identities=17% Similarity=0.087 Sum_probs=41.1
Q ss_pred eEEEecC-CCcEEEe-CCCCcEEEEeccccccceecCC-CCCCCeeEEEeCCCCCEEEEeCC---cceEEEE
Q 044877 34 QCFASTG-DGSIVVG-SLDGKIRLYSSNSMRQAKTAFP-GLGSPIRYVDVTYDGRWILGTTD---TYLILIC 99 (244)
Q Consensus 34 t~vats~-~G~IavG-S~dG~IRLyD~~~~r~aKt~lp-glGdPI~~vdvS~DG~~lLaT~~---~~L~L~d 99 (244)
..+|++. .|.|++. ...+.|.++|..+.. .++++. ++..| .+|++.|++.+|..|-. ..|..++
T Consensus 456 ~glavD~~~g~LY~tD~~~~~I~v~d~dg~~-~~~l~~~~~~~P-~giavDp~~g~ly~td~~~~~~I~~~~ 525 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK-RKTLFREQGSKP-RAIVVDPVHGFMYWTDWGTPAKIKKGG 525 (699)
T ss_dssp CCEECCCSSSBCEECCTTTSCEEEEBSSSCC-EEEECCCSSCCC-CCEECCSSSSCCEECCCSSSCCEEBCC
T ss_pred ceEEEEeeCCcEEEEeccCCeEEEEecCCCc-eEEEEeCCCCCc-ceEEEccCCCcEEEcccCCCCeEEEEe
Confidence 4678874 5666655 457889999986543 444554 34444 89999998776665542 3455544
No 315
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=23.87 E-value=1.2e+02 Score=27.40 Aligned_cols=62 Identities=8% Similarity=0.009 Sum_probs=35.2
Q ss_pred CCcEEEeCCCCcEEEEecccccccee-cCCCCCCCee----------E-EEe--CCCCCEEEEeCCcceEEEEeee
Q 044877 41 DGSIVVGSLDGKIRLYSSNSMRQAKT-AFPGLGSPIR----------Y-VDV--TYDGRWILGTTDTYLILICTLF 102 (244)
Q Consensus 41 ~G~IavGS~dG~IRLyD~~~~r~aKt-~lpglGdPI~----------~-vdv--S~DG~~lLaT~~~~L~L~dt~~ 102 (244)
+|.|++|+.||.|.-+|..+++..=+ ..+.+..++. . +.+ +.||+...-...+.+..|...+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecc
Confidence 45699999999999999876653311 1111122222 1 123 5677766555555566665543
No 316
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=23.86 E-value=1.1e+02 Score=29.98 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=44.2
Q ss_pred ceeEEEecC-C---C-c--EEEeCCCCcEE-EEeccccc----cce-----ecCCC--------CCCCeeEEEeCCCCCE
Q 044877 32 NFQCFASTG-D---G-S--IVVGSLDGKIR-LYSSNSMR----QAK-----TAFPG--------LGSPIRYVDVTYDGRW 86 (244)
Q Consensus 32 ~Ft~vats~-~---G-~--IavGS~dG~IR-LyD~~~~r----~aK-----t~lpg--------lGdPI~~vdvS~DG~~ 86 (244)
.||.||.+. . + + +.+|+.+|.|. +.-..... ..- ..++. .+.||..|.++++.++
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 579999886 2 2 4 78999999984 33221100 000 11221 2689999999999999
Q ss_pred EEEeCCcceEEEE
Q 044877 87 ILGTTDTYLILIC 99 (244)
Q Consensus 87 lLaT~~~~L~L~d 99 (244)
|.+.+.+.|.=+.
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9998887754444
No 317
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=23.29 E-value=55 Score=31.13 Aligned_cols=50 Identities=20% Similarity=0.098 Sum_probs=31.6
Q ss_pred CCCcEEEEeccccccceecCCCCCCCeeE-EEeCCCCCEEEEeCCcceEEEEe
Q 044877 49 LDGKIRLYSSNSMRQAKTAFPGLGSPIRY-VDVTYDGRWILGTTDTYLILICT 100 (244)
Q Consensus 49 ~dG~IRLyD~~~~r~aKt~lpglGdPI~~-vdvS~DG~~lLaT~~~~L~L~dt 100 (244)
.+|.|..||..+++..=. .+ ++.|+.+ .-++++|.-++++.+.+|+.+|.
T Consensus 464 ~~G~l~A~D~~tG~~~W~-~~-~~~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWE-HK-EHLPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp CSEEEEEECTTTCCEEEE-EE-ESSCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred CcceEEEEECCCCCEEEE-ec-CCCCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 478999999987764311 12 2233332 23456776666666789999996
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=22.75 E-value=2.4e+02 Score=25.33 Aligned_cols=65 Identities=14% Similarity=0.093 Sum_probs=38.5
Q ss_pred EEEecCCCcEEEeC-------------CCCcEEEEeccc--cccceecCCCCC-------CCeeEEEeCC--CCC--EEE
Q 044877 35 CFASTGDGSIVVGS-------------LDGKIRLYSSNS--MRQAKTAFPGLG-------SPIRYVDVTY--DGR--WIL 88 (244)
Q Consensus 35 ~vats~~G~IavGS-------------~dG~IRLyD~~~--~r~aKt~lpglG-------dPI~~vdvS~--DG~--~lL 88 (244)
-++..++|.+++++ .+|.|-+||..+ .+ ++ .|.-.| ---.+|++-+ ||+ .++
T Consensus 54 Di~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~-~~-~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 54 DLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA-VS-ELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp EEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC-EE-ECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred eeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc-eE-EEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 45667889988887 799999999852 22 22 222112 2456777765 575 333
Q ss_pred EeC---CcceEEEEee
Q 044877 89 GTT---DTYLILICTL 101 (244)
Q Consensus 89 aT~---~~~L~L~dt~ 101 (244)
++- ..++-|++..
T Consensus 132 vnh~~~~s~ielf~~d 147 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQ 147 (355)
T ss_dssp EECSTTCCEEEEEEEE
T ss_pred EECCCCCCeEEEEEEE
Confidence 443 2456676654
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=21.22 E-value=3.3e+02 Score=28.45 Aligned_cols=66 Identities=9% Similarity=0.061 Sum_probs=43.7
Q ss_pred CCceeEEEecCCCcEEEeCCCCcEEEEeccccc---cceecCCCCCCCeeEEEeCCC------CCEEEEeC--CcceEEE
Q 044877 30 GTNFQCFASTGDGSIVVGSLDGKIRLYSSNSMR---QAKTAFPGLGSPIRYVDVTYD------GRWILGTT--DTYLILI 98 (244)
Q Consensus 30 ~~~Ft~vats~~G~IavGS~dG~IRLyD~~~~r---~aKt~lpglGdPI~~vdvS~D------G~~lLaT~--~~~L~L~ 98 (244)
+..+++++++.. +|++++ .|.|-+|....+. ..+ ..+.+.|.++++++. +++++..| +.+++|+
T Consensus 513 ~~~I~~As~n~~-~vvva~-g~~l~~fel~~~~L~~~~~---~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~ 587 (1158)
T 3ei3_A 513 AKNISVASCNSS-QVVVAV-GRALYYLQIHPQELRQISH---TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARIL 587 (1158)
T ss_dssp CCCCCEEEECSS-EEEEEE-TTEEEEEEEETTEEEEEEE---EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEE
T ss_pred CCEEEEEEeCCC-EEEEEE-CCEEEEEEeeCCceeeecc---cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEE
Confidence 345667776654 788885 6788887553211 122 235679999999864 36888777 4679998
Q ss_pred Ee
Q 044877 99 CT 100 (244)
Q Consensus 99 dt 100 (244)
..
T Consensus 588 sL 589 (1158)
T 3ei3_A 588 KL 589 (1158)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 320
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=21.09 E-value=1.3e+02 Score=29.34 Aligned_cols=65 Identities=9% Similarity=0.045 Sum_probs=36.4
Q ss_pred eEEEecC-CCcEEEeCC--CCcEEEEeccccccceecC-CCCCCCeeEEEeCCCCCEEE-EeCC-cceEEEEe
Q 044877 34 QCFASTG-DGSIVVGSL--DGKIRLYSSNSMRQAKTAF-PGLGSPIRYVDVTYDGRWIL-GTTD-TYLILICT 100 (244)
Q Consensus 34 t~vats~-~G~IavGS~--dG~IRLyD~~~~r~aKt~l-pglGdPI~~vdvS~DG~~lL-aT~~-~~L~L~dt 100 (244)
..+|+++ .|.|+.... .+.|..++..+. ..++++ .++..| .+|+++|++.+|. +-.. ..|..+|.
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~-~~~~l~~~~l~~P-nGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWP-NGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSSSC-CCCEESCSSCSSC-CCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCCCC-CeeEEEeCCCCCc-cEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 3456665 455555443 267777766432 223232 234333 6899999876665 4444 55777774
Done!