BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044880
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5QM99|RL37A_ORYSJ 60S ribosomal protein L37a OS=Oryza sativa subsp. japonica
GN=Os01g0679700 PE=1 SV=1
Length = 92
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/91 (96%), Positives = 91/91 (100%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCG 61
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
KVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTEA 92
>sp|Q9XHE4|RL37A_GOSHI 60S ribosomal protein L37a OS=Gossypium hirsutum GN=RPL37A PE=3
SV=1
Length = 92
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/91 (98%), Positives = 90/91 (98%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCK CG
Sbjct: 2 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKACG 61
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
KVKAGGAYTLNTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 92
>sp|Q9ZRS8|RL37A_PSEMZ 60S ribosomal protein L37a OS=Pseudotsuga menziesii GN=RPL37A
PE=3 SV=1
Length = 92
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/90 (96%), Positives = 89/90 (98%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK+AVKRKAVGIWGCKDCG
Sbjct: 2 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKFAVKRKAVGIWGCKDCG 61
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTE 90
KVKAGGAYTLNT SAVTVRSTIRRLREQTE
Sbjct: 62 KVKAGGAYTLNTPSAVTVRSTIRRLREQTE 91
>sp|Q9SRK6|R37A1_ARATH Putative 60S ribosomal protein L37a-1 OS=Arabidopsis thaliana
GN=RPL37AB PE=3 SV=1
Length = 92
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 86/91 (94%), Positives = 89/91 (97%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKY+VKRK VGIWGCKDCG
Sbjct: 2 TKRTKKARIVGKYGTRYGASLRKQIKKMEVSQHNKYFCEFCGKYSVKRKVVGIWGCKDCG 61
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
KVKAGGAYT+NTASAVTVRSTIRRLREQTES
Sbjct: 62 KVKAGGAYTMNTASAVTVRSTIRRLREQTES 92
>sp|Q8RXU5|R37A2_ARATH 60S ribosomal protein L37a-2 OS=Arabidopsis thaliana GN=RPL37AC
PE=3 SV=1
Length = 92
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/89 (94%), Positives = 86/89 (96%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGK
Sbjct: 3 KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
VKAGGAYT+NTASAVTVRSTIRRLREQ E
Sbjct: 63 VKAGGAYTMNTASAVTVRSTIRRLREQIE 91
>sp|P43209|RL37A_BRARA 60S ribosomal protein L37a OS=Brassica rapa GN=RPL37A PE=3 SV=2
Length = 93
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/90 (93%), Positives = 86/90 (95%), Gaps = 1/90 (1%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGKY VKRKAVGIWGCKDCGK
Sbjct: 3 KRTKKVGIVGKYGTRYGASIRKQIKKMEVSQHSKYFCEFCGKYGVKRKAVGIWGCKDCGK 62
Query: 62 VKAGGAYTLNTASAVTVRS-TIRRLREQTE 90
VKAGGAYT+NTASAVTVRS TIRRLREQ E
Sbjct: 63 VKAGGAYTMNTASAVTVRSHTIRRLREQIE 92
>sp|A4S6Z4|RL37A_OSTLU 60S ribosomal protein L37a OS=Ostreococcus lucimarinus (strain
CCE9901) GN=RPL37a PE=3 SV=1
Length = 92
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/89 (80%), Positives = 78/89 (87%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KRKAVGIW CK C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKVVKKQEVSQHSKFFCDFCGKYGMKRKAVGIWSCKGCNK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
KAGGAY+LNT +VTVRSTIRRLRE TE
Sbjct: 63 TKAGGAYSLNTGGSVTVRSTIRRLREATE 91
>sp|Q00VK4|RL37A_OSTTA 60S ribosomal protein L37a OS=Ostreococcus tauri GN=RPL37a PE=3
SV=2
Length = 92
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 71/89 (79%), Positives = 78/89 (87%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK EVSQHSK+FC+FCGKY +KR+AVGIW CK C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKVVKKTEVSQHSKFFCDFCGKYGMKRQAVGIWCCKGCNK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
KAGGAY+LNT +VTVRSTIRRLRE TE
Sbjct: 63 TKAGGAYSLNTGGSVTVRSTIRRLREATE 91
>sp|O61462|RL37A_CRYST 60S ribosomal protein L37a OS=Cryptochiton stelleri GN=RPL37A
PE=3 SV=3
Length = 92
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/90 (74%), Positives = 77/90 (85%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KKME++QHSKY C+FCGK A+KR+AVGIWGCK C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKTVKKMEITQHSKYTCQFCGKDAMKRQAVGIWGCKSCRK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTES 91
V AGGA+ +T +AVTVRS +RRLRE ES
Sbjct: 63 VVAGGAWVYSTMAAVTVRSAVRRLREMKES 92
>sp|Q54UG4|RL37A_DICDI 60S ribosomal protein L37a OS=Dictyostelium discoideum GN=rpl37A
PE=3 SV=1
Length = 91
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK G+VGKYGTRYGASLRKQ+KKME++QH Y C FCGK AV+R +VGIW C C K
Sbjct: 3 KRTKKVGVVGKYGTRYGASLRKQVKKMEITQHGTYTCSFCGKDAVRRSSVGIWKCNGCRK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
V AGGA+T++TA+ TVRSTIRRLRE
Sbjct: 63 VLAGGAWTMSTAAGATVRSTIRRLRE 88
>sp|Q751L1|RL43_ASHGO 60S ribosomal protein L43 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPL43 PE=3
SV=1
Length = 92
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 71/90 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GI GKYG RYG+SLR+Q+KK+EV QH++Y C FCGK AVKR A GIW C C K
Sbjct: 3 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKAVKRGAAGIWNCSSCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTES 91
AGGAYT +TA+A TVRSTIRRLRE E+
Sbjct: 63 TVAGGAYTFSTAAAATVRSTIRRLREMAEA 92
>sp|Q7SZB4|RL37A_XENLA 60S ribosomal protein L37a OS=Xenopus laevis GN=rpl37a PE=3 SV=3
Length = 92
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 72/86 (83%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTR+GASLRK +KK+E+SQH+KY C FCGK +KRKAVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRFGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
+ AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 IVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|P32046|RL37A_CHICK 60S ribosomal protein L37a OS=Gallus gallus GN=RPL37A PE=2 SV=2
Length = 92
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/86 (73%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KRKAVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRKAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|Q9U2A8|RL37A_CAEEL 60S ribosomal protein L37a OS=Caenorhabditis elegans GN=rpl-43
PE=3 SV=3
Length = 91
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/89 (71%), Positives = 70/89 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK KK+EV+QHS+Y C FCGK A+KRKA GIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMAKKLEVAQHSRYTCSFCGKEAMKRKATGIWNCAKCHK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
V AGGAY T +A TVRSTIRRLR+ E
Sbjct: 63 VVAGGAYVYGTVTAATVRSTIRRLRDLKE 91
>sp|P61515|RL37P_RAT Putative 60S ribosomal protein L37a OS=Rattus norvegicus
GN=Rpl37a-ps1 PE=5 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|Q5RBF9|RL37A_PONAB 60S ribosomal protein L37a OS=Pongo abelii GN=RPL37A PE=3 SV=3
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|P61514|RL37A_MOUSE 60S ribosomal protein L37a OS=Mus musculus GN=Rpl37a PE=2 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|P61513|RL37A_HUMAN 60S ribosomal protein L37a OS=Homo sapiens GN=RPL37A PE=1 SV=2
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|Q3MIC0|RL37A_BOVIN 60S ribosomal protein L37a OS=Bos taurus GN=RPL37A PE=3 SV=3
Length = 92
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/86 (72%), Positives = 71/86 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
AGGA+T NT SAVTV+S IRRL+E
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIRRLKE 88
>sp|O61598|RL37A_OSTOS 60S ribosomal protein L37a OS=Ostertagia ostertagi GN=rpl-37a
PE=3 SV=3
Length = 91
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 70/89 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KKME++QHS+Y C FCGK A++R AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSRYTCPFCGKDAMRRGAVGIWNCSKCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
AGGAY T +A TVRST+RRLR+ E
Sbjct: 63 TVAGGAYVYGTVAAATVRSTVRRLRDLKE 91
>sp|Q90YT0|RL37A_ICTPU 60S ribosomal protein L37a OS=Ictalurus punctatus GN=rpl37a PE=3
SV=3
Length = 92
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 72/89 (80%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
AGGA+T NT SAVTV+S I+RL+E +
Sbjct: 63 TVAGGAWTYNTTSAVTVKSAIKRLKEMKD 91
>sp|Q6FRG6|RL43_CANGA 60S ribosomal protein L43 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPL43
PE=3 SV=1
Length = 92
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 59/90 (65%), Positives = 71/90 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GI GKYG RYG+SLR+Q+KK+EV QH++Y C FCGK V+R A GIW C C K
Sbjct: 3 KRTKKVGITGKYGVRYGSSLRRQVKKLEVQQHARYDCSFCGKKTVRRGAAGIWSCHSCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTES 91
AGGAYT++TA+A TVRSTIRRLR+ E+
Sbjct: 63 TVAGGAYTVSTAAAATVRSTIRRLRDMVEA 92
>sp|P0CX26|RL43B_YEAST 60S ribosomal protein L43-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43B PE=1 SV=1
Length = 92
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GI GKYG RYG+SLR+Q+KK+E+ QH++Y C FCGK VKR A GIW C C K
Sbjct: 3 KRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTES 91
AGGAYT++TA+A TVRSTIRRLRE E+
Sbjct: 63 TVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>sp|P0CX25|RL43A_YEAST 60S ribosomal protein L43-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL43A PE=1 SV=1
Length = 92
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/90 (66%), Positives = 71/90 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GI GKYG RYG+SLR+Q+KK+E+ QH++Y C FCGK VKR A GIW C C K
Sbjct: 3 KRTKKVGITGKYGVRYGSSLRRQVKKLEIQQHARYDCSFCGKKTVKRGAAGIWTCSCCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTES 91
AGGAYT++TA+A TVRSTIRRLRE E+
Sbjct: 63 TVAGGAYTVSTAAAATVRSTIRRLREMVEA 92
>sp|Q9VMU4|RL37A_DROME 60S ribosomal protein L37a OS=Drosophila melanogaster GN=RpL37A
PE=1 SV=3
Length = 92
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 59/89 (66%), Positives = 70/89 (78%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KKME++QHSKY C FCGK ++KR VGIW CK C +
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKMEITQHSKYTCSFCGKDSMKRAVVGIWSCKRCKR 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLREQTE 90
AGGA+ +T +A +VRS +RRLRE E
Sbjct: 63 TVAGGAWVYSTTAAASVRSAVRRLRETKE 91
>sp|Q9Y0H7|RL37A_MYXGL 60S ribosomal protein L37a (Fragment) OS=Myxine glutinosa
GN=rpl37a PE=3 SV=1
Length = 85
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 68/84 (80%)
Query: 7 AGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGG 66
GIVGKYGTRYGASLRK +KK+E++QHSKY C FCGK +KR+AVGIW C C K AGG
Sbjct: 1 VGIVGKYGTRYGASLRKMVKKIEITQHSKYTCTFCGKTKMKRRAVGIWHCGSCMKTVAGG 60
Query: 67 AYTLNTASAVTVRSTIRRLREQTE 90
A+T NT+SAVTV+S IRRLRE +
Sbjct: 61 AWTYNTSSAVTVKSAIRRLREMKD 84
>sp|Q23G98|RL37A_TETTS 60S ribosomal protein L37a OS=Tetrahymena thermophila (strain
SB210) GN=RPL37A PE=1 SV=1
Length = 103
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 67/86 (77%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRT+K GI KYGTRYGASLRK +KK E++QH+KY C FCGK AVKR AVGIW CK C K
Sbjct: 3 KRTQKVGITRKYGTRYGASLRKVVKKFEITQHAKYGCPFCGKVAVKRAAVGIWKCKPCKK 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRRLRE 87
+ AGGA+ L T AVT ++T+ RL++
Sbjct: 63 IIAGGAWELTTPPAVTAKTTMNRLKK 88
>sp|O96184|RL37A_PLAF7 60S ribosomal protein L37a OS=Plasmodium falciparum (isolate 3D7)
GN=RPL37A PE=3 SV=1
Length = 96
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/90 (62%), Positives = 69/90 (76%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
++RTKK G+ GKYGTRYG+SLRKQIKK+E+ QH+KY C FCGK A KR VGIW CK C
Sbjct: 2 SRRTKKVGLTGKYGTRYGSSLRKQIKKIELMQHAKYLCTFCGKTATKRTCVGIWKCKKCK 61
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTE 90
+ GGA++L T +AV +STI RLR+Q E
Sbjct: 62 RKVCGGAWSLTTPAAVAAKSTIIRLRKQKE 91
>sp|O17307|RL37A_SCHMA 60S ribosomal protein L37a (Fragment) OS=Schistosoma mansoni PE=3
SV=1
Length = 91
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/91 (68%), Positives = 72/91 (79%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCG 60
KRTKK GIVGKYG RYGASLRK IKK+E+SQH+KY C FCGK ++KRKA GIW CK C
Sbjct: 1 DKRTKKVGIVGKYGVRYGASLRKTIKKIEISQHAKYNCNFCGKDSLKRKAAGIWECKACK 60
Query: 61 KVKAGGAYTLNTASAVTVRSTIRRLREQTES 91
KV AGGAY +T +A T+R+ IRRLR+ ES
Sbjct: 61 KVVAGGAYVCSTTAATTIRAAIRRLRDAHES 91
>sp|D4AAZ6|RL37A_RAT 60S ribosomal protein L37a OS=Rattus norvegicus GN=Rpl37a PE=1
SV=1
Length = 72
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 56/68 (82%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
KRTKK GIVGKYGTRYGASLRK +KK+E+SQH+KY C FCGK +KR+AVGIW C C K
Sbjct: 3 KRTKKVGIVGKYGTRYGASLRKMVKKIEISQHAKYTCSFCGKTKMKRRAVGIWHCGSCMK 62
Query: 62 VKAGGAYT 69
AGGA+T
Sbjct: 63 TVAGGAWT 70
>sp|O94686|RL43B_SCHPO 60S ribosomal protein L43-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43b PE=3 SV=1
Length = 94
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 69/92 (75%), Gaps = 2/92 (2%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KD 58
TKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K
Sbjct: 2 TKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKG 61
Query: 59 CGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 90
C K AGGA+T+ TA+A + RSTIRRLRE E
Sbjct: 62 CSKTLAGGAWTVTTAAATSARSTIRRLREMVE 93
>sp|Q9HGL8|RL43A_SCHPO 60S ribosomal protein L43-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl43a PE=3 SV=1
Length = 94
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/92 (64%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Query: 1 TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGC--KD 58
TKRTKK G+ GKYG RYGASLR+ ++K+EV QHS+Y C FCG+ VKR A GIW C K
Sbjct: 2 TKRTKKVGVTGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRNTVKRTAAGIWCCNGKG 61
Query: 59 CGKVKAGGAYTLNTASAVTVRSTIRRLREQTE 90
C KV AGGA+T+ TA+A + RSTIRRLRE E
Sbjct: 62 CKKVLAGGAWTVTTAAATSARSTIRRLREMVE 93
>sp|A6NKH3|RL37L_HUMAN Putative 60S ribosomal protein L37a-like OS=Homo sapiens
GN=RPL37L PE=5 SV=2
Length = 93
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 58/80 (72%)
Query: 8 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGA 67
GIV KY T +GASL K +K++E+SQH+KY C FCGK +KR+AV I C C K AG A
Sbjct: 10 GIVSKYRTHHGASLWKMVKEIEISQHTKYTCSFCGKTKMKRRAVKIRHCNSCMKTVAGSA 69
Query: 68 YTLNTASAVTVRSTIRRLRE 87
+T NT SAV V+S IRRL+E
Sbjct: 70 WTYNTTSAVMVKSAIRRLKE 89
>sp|Q8TYC3|RL37A_METKA 50S ribosomal protein L37Ae OS=Methanopyrus kandleri (strain AV19
/ DSM 6324 / JCM 9639 / NBRC 100938) GN=rpl37ae PE=3
SV=1
Length = 89
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RTKK G G++G RYG +R+++ ++E Q K+ C C K AVKR GIW C CG
Sbjct: 3 RTKKVGPAGRFGPRYGMRIRRRVAEIESVQRQKHECPVCHKRAVKRVGTGIWRCTKCGAE 62
Query: 63 KAGGAYTLNTASAVTVRSTIRRLREQ 88
GGAY T + VR IR+ E+
Sbjct: 63 FTGGAYYPETEAQRIVRRAIRKALEE 88
>sp|P54051|RL37A_METJA 50S ribosomal protein L37Ae OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 /
NBRC 100440) GN=rpl37ae PE=3 SV=1
Length = 92
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G RYG +R +++ +E+ KY C CG +KR + IW C CG
Sbjct: 5 TKKVGPTGRFGPRYGLKIRVRVRDVEIKAKKKYKCPVCGFPKLKRASTSIWVCGKCGAKI 64
Query: 64 AGGAYTLNTASAVTVRSTIRRLREQTES 91
AGGAYT T + V IRR+ E+ E
Sbjct: 65 AGGAYTPETGAGKAVMKAIRRIVERKEE 92
>sp|B8D6B7|RL37A_DESK1 50S ribosomal protein L37Ae OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCG-KYAVKRKAVGIWGCKDCGK 61
+TK GI G+YGTRYG++LRK+I+ + ++S + C FCG K V R + G+W CK CG
Sbjct: 3 KTKVVGIAGRYGTRYGSTLRKKIRDILEKRYSPHTCPFCGHKGKVYRLSTGVWACKKCGA 62
Query: 62 VKAGGAYTLNTASAVTVRSTIRR 84
AGGAY T SA I R
Sbjct: 63 KWAGGAYMPKTESAKLFSDIIIR 85
>sp|O26777|RL37A_METTH 50S ribosomal protein L37Ae OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RTKK GI G++G RYG ++ +KK+E K+ C C + VKR++ GIW C+ CG V
Sbjct: 3 RTKKVGITGRFGPRYGRKAKRAVKKIEEEMKRKHVCPSCDRPGVKRESRGIWKCRKCGAV 62
Query: 63 KAGGAYTLNTASAVTVRSTIRRL 85
GGAY T T I+R+
Sbjct: 63 FTGGAYLPVTPMGKTAARNIKRI 85
>sp|A5UNQ7|RL37A_METS3 50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=rpl37ae PE=3 SV=1
Length = 89
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 47/83 (56%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RTKK GI G++G RYG ++ +K +E + + C C + VKR+A GIW C+ CG V
Sbjct: 3 RTKKVGITGRFGARYGRKAKRSVKMIEENMKKNHVCPRCDRPYVKRQAAGIWKCRKCGAV 62
Query: 63 KAGGAYTLNTASAVTVRSTIRRL 85
GGAY T A + IR +
Sbjct: 63 FTGGAYVPETPMAKSAARNIRNV 85
>sp|Q9V202|RL37A_PYRAB 50S ribosomal protein L37Ae OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rpl37ae PE=3 SV=1
Length = 83
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 44/71 (61%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW CK CG +
Sbjct: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVRRISTGIWQCKKCGAIF 63
Query: 64 AGGAYTLNTAS 74
AGGAY T +
Sbjct: 64 AGGAYLPVTPA 74
>sp|O74106|RL37A_PYRHO 50S ribosomal protein L37Ae OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rpl37ae PE=3 SV=2
Length = 83
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G RYG +R+++ +E K+ C CG+ AVKR + GIW C CG +
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHVCPVCGRRAVKRISTGIWQCTKCGAIF 63
Query: 64 AGGAYTLNTASAVTVRSTI 82
AGGAY T + R +
Sbjct: 64 AGGAYLPVTPAGKVARRIM 82
>sp|Q8TZI4|RL37A_PYRFU 50S ribosomal protein L37Ae OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rpl37ae PE=1 SV=1
Length = 83
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G RYG +R+++ +E K+ C CG+ AVKR + GIW C+ CG
Sbjct: 4 TKKVGSAGRFGARYGLKIRRRVAAVEAKMRQKHTCPVCGRKAVKRISTGIWQCQKCGATF 63
Query: 64 AGGAYTLNTASAVTVR 79
AGGAY T + VR
Sbjct: 64 AGGAYLPVTPAGKAVR 79
>sp|C6A452|RL37A_THESM 50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM
739 / DSM 12597) GN=rpl37ae PE=3 SV=1
Length = 85
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%)
Query: 2 KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGK 61
RTKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG
Sbjct: 2 PRTKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGA 61
Query: 62 VKAGGAYTLNTAS 74
AGGAY T +
Sbjct: 62 TFAGGAYLPATPA 74
>sp|Q6M0M1|RL37A_METMP 50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain
S2 / LL) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G+RYG +R +++ +E+ Q+ Y C C +KR IW C+ CG
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQNKDYKCPVCAFPKLKRAGTSIWVCEKCGAKI 66
Query: 64 AGGAYTLNTASAVTVRSTIRRLRE 87
AGGAYT T + V IRR+ E
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIE 90
>sp|A6URN7|RL37A_METVS 50S ribosomal protein L37Ae OS=Methanococcus vannielii (strain SB
/ ATCC 35089 / DSM 1224) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G RYG +R +++ +E+ Q+ +Y C C +KR IW C CG
Sbjct: 7 TKKIGSAGRFGPRYGRKIRVRLRDVEIKQNKEYKCPVCAFPKLKRAGTSIWVCDKCGAKI 66
Query: 64 AGGAYTLNTASAVTVRSTIRRLRE 87
AGGAYT T + V IRR+ E
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIE 90
>sp|Q5JDM6|RL37A_PYRKO 50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG
Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 63 KAGGAYTLNTAS 74
AGGAY T +
Sbjct: 63 FAGGAYLPTTPA 74
>sp|A4FZT8|RL37A_METM5 50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain
C5 / ATCC BAA-1333) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C+ CG
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRAGTSIWVCEKCGAKI 66
Query: 64 AGGAYTLNTASAVTVRSTIRRLRE 87
AGGAYT T + V IRR+ E
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIE 90
>sp|C5A4Z4|RL37A_THEGJ 50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG
Sbjct: 3 RTVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 63 KAGGAYTLNTAS 74
AGGAY T +
Sbjct: 63 FAGGAYLPTTPA 74
>sp|B6YTZ8|RL37A_THEON 50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain
NA1) GN=rpl37ae PE=3 SV=1
Length = 86
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 3 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKV 62
RT K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG
Sbjct: 3 RTTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGAT 62
Query: 63 KAGGAYTLNTAS 74
AGGAY T +
Sbjct: 63 FAGGAYLPVTPA 74
>sp|A6VIN8|RL37A_METM7 50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain
C7 / ATCC BAA-1331) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKI 66
Query: 64 AGGAYTLNTASAVTVRSTIRRLRE 87
AGGAYT T + V IRR+ E
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIE 90
>sp|A9A848|RL37A_METM6 50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain
C6 / ATCC BAA-1332) GN=rpl37ae PE=3 SV=1
Length = 96
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%)
Query: 4 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVK 63
TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG
Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKI 66
Query: 64 AGGAYTLNTASAVTVRSTIRRLRE 87
AGGAYT T + V IRR+ E
Sbjct: 67 AGGAYTPETGAGKVVTKAIRRVIE 90
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,883,892
Number of Sequences: 539616
Number of extensions: 908240
Number of successful extensions: 2831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2748
Number of HSP's gapped (non-prelim): 81
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)