Query 044883
Match_columns 180
No_of_seqs 36 out of 38
Neff 2.3
Searched_HMMs 13730
Date Mon Mar 25 13:21:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044883.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/044883hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1om2a_ a.23.4.1 (A:) Mitochon 67.4 3.5 0.00025 28.8 4.4 68 29-98 12-79 (95)
2 d2i47a1 d.92.1.10 (A:220-473) 42.8 5 0.00037 29.2 1.8 40 23-63 201-245 (254)
3 d2fcea1 a.39.1.5 (A:84-144) Ca 23.9 44 0.0032 19.2 3.6 42 31-76 1-42 (61)
4 d1u5fa1 b.55.1.1 (A:109-219) S 21.7 6.4 0.00047 24.4 -0.8 31 32-63 74-105 (111)
5 d2j59m1 b.55.1.1 (M:931-1063) 20.0 2.5 0.00018 27.7 -3.2 39 24-63 63-103 (133)
6 d2fmma1 b.34.13.2 (A:108-175) 19.0 18 0.0013 23.3 1.0 28 42-69 38-65 (68)
7 d1wjma_ b.55.1.1 (A:) beta-spe 17.8 6.7 0.00049 24.6 -1.3 29 34-63 82-111 (123)
8 d1u6ka1 c.127.1.1 (A:2-283) F4 17.7 24 0.0018 28.7 1.8 26 31-59 215-241 (282)
9 d2hf5a1 a.39.1.5 (A:81-113) Tr 16.2 24 0.0017 20.0 1.0 15 29-44 1-15 (33)
10 d1wgqa_ b.55.1.1 (A:) FYVE, Rh 16.1 6.1 0.00044 24.5 -1.9 33 31-63 65-97 (109)
No 1
>d1om2a_ a.23.4.1 (A:) Mitochondrial import receptor subunit Tom20 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=67.42 E-value=3.5 Score=28.80 Aligned_cols=68 Identities=12% Similarity=0.136 Sum_probs=58.0
Q ss_pred ChhhhhhhhhhhhhhhHHHhhhcccHHHHHHHHhhhccccchHHHHHHHhhhhHhHhhhhHHHHHHHHhh
Q 044883 29 TKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRES 98 (180)
Q Consensus 29 TkeDVkrCfmL~FDR~AFIiast~teeem~~wy~erVvw~d~~~~~kLlrkGiltRiy~P~~ii~~lrEs 98 (180)
..|.++++||-+...-==.++...-++...++|+.-.|.+.+..-+..+++.+=-.||.+ ||+.|-+-
T Consensus 12 D~~~~e~~Fl~eV~lGE~Ll~~G~~~~g~~h~~nAi~Vc~qP~~LL~ilq~tlP~~Vf~~--Ll~kLp~~ 79 (95)
T d1om2a_ 12 DAEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQM--LLTKLPTI 79 (95)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCCHHHHH--HHHHSCSH
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhhCCHHHHHH--HHHHHHHH
Confidence 467899999999887655577777788899999999999999999999999999999987 67777553
No 2
>d2i47a1 d.92.1.10 (A:220-473) TNF-alpha converting enzyme, TACE, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.82 E-value=5 Score=29.16 Aligned_cols=40 Identities=10% Similarity=0.232 Sum_probs=30.1
Q ss_pred cCCCCCChhhhhhhhhhhh-----hhhHHHhhhcccHHHHHHHHhh
Q 044883 23 RCGCKPTKEDVRRCFMLEF-----DRAAFIIASTATEDEMLNWYRE 63 (180)
Q Consensus 23 RCgCKPTkeDVkrCfmL~F-----DR~AFIiast~teeem~~wy~e 63 (180)
.|.|.|....-..|.|-.- +.-.+ .+|.+|.++|.++++.
T Consensus 201 ~~~C~~~~~~~~~~IMs~~~~~~~~~~~~-~fS~CS~~~~~~~l~~ 245 (254)
T d2i47a1 201 LAECAPNEDQGGKYVMYPIAVSGDHENNK-MFSQCSKQSIYKTIES 245 (254)
T ss_dssp TTSSSCCGGGTCCCTTCSSCCCSCSGGGG-SCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCeEeccccccCCCCCCC-cCCHhHHHHHHHHHcc
Confidence 5889998887788999532 22223 4999999999998865
No 3
>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=23.87 E-value=44 Score=19.23 Aligned_cols=42 Identities=14% Similarity=0.171 Sum_probs=21.1
Q ss_pred hhhhhhhhhhhhhhHHHhhhcccHHHHHHHHhhhccccchHHHHHH
Q 044883 31 EDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKL 76 (180)
Q Consensus 31 eDVkrCfmL~FDR~AFIiast~teeem~~wy~erVvw~d~~~~~kL 76 (180)
|++++.|-+ ||+- =-+.-+.+|++++++..-..-+++....|
T Consensus 1 Eel~~aF~~-fD~~---~~G~I~~~el~~~l~~~g~~~~~~ei~~l 42 (61)
T d2fcea1 1 EDFVKAFQV-FDKE---STGKVSVGDLRYMLTGLGEKLTDAEVDEL 42 (61)
T ss_dssp HHHHHHHHH-HCTT---CCSCEEHHHHHHHHHHTTCCCCHHHHHHH
T ss_pred ChHHHHHHH-HCCC---CCCeEeHHHHHHHHHHcCCCCCHHHHHHH
Confidence 455555543 5554 33355666666666554444344333333
No 4
>d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.74 E-value=6.4 Score=24.38 Aligned_cols=31 Identities=16% Similarity=0.458 Sum_probs=22.4
Q ss_pred hhhhhhhhhh-hhhHHHhhhcccHHHHHHHHhh
Q 044883 32 DVRRCFMLEF-DRAAFIIASTATEDEMLNWYRE 63 (180)
Q Consensus 32 DVkrCfmL~F-DR~AFIiast~teeem~~wy~e 63 (180)
.-+-||.+.+ |.-.|++++ .+++||..|+..
T Consensus 74 ~~~~~f~i~~~~~~~~~~~a-~s~~e~~~W~~a 105 (111)
T d1u5fa1 74 KKDCCFEICAPDKRIYQFTA-ASPKDAEEWVQQ 105 (111)
T ss_dssp TGGGEEEEECTTSCEEEEEC-SSHHHHHHHHHH
T ss_pred cccceEEEEccCCcEEEEEc-CCHHHHHHHHHH
Confidence 4567898877 544566654 389999999863
No 5
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.99 E-value=2.5 Score=27.67 Aligned_cols=39 Identities=18% Similarity=0.451 Sum_probs=22.6
Q ss_pred CCCCCChhhhh--hhhhhhhhhhHHHhhhcccHHHHHHHHhh
Q 044883 24 CGCKPTKEDVR--RCFMLEFDRAAFIIASTATEDEMLNWYRE 63 (180)
Q Consensus 24 CgCKPTkeDVk--rCfmL~FDR~AFIiast~teeem~~wy~e 63 (180)
|.|....++-+ -||.+.-.---|++ .+.++++|..|...
T Consensus 63 ~~v~~~~~~~~r~~~F~i~~~~~~~~f-~A~s~~e~~~Wi~a 103 (133)
T d2j59m1 63 CLIDISYSETKRKNVFRLTTSDCECLF-QAEDRDDMLAWIKT 103 (133)
T ss_dssp CEEEECSSSCSCSSEEEEECSSCEEEE-ECSSHHHHHHHHHH
T ss_pred eEEEEcccccccCceeEEecCCCEEEE-EeCCHHHHHHHHHH
Confidence 54433333333 38855433334655 45789999999764
No 6
>d2fmma1 b.34.13.2 (A:108-175) Heterochromatin protein 1, HP1 {Mouse (Mus musculus), HP1 beta (MOD1, M31) [TaxId: 10090]}
Probab=19.01 E-value=18 Score=23.31 Aligned_cols=28 Identities=18% Similarity=0.402 Sum_probs=20.0
Q ss_pred hhhHHHhhhcccHHHHHHHHhhhccccc
Q 044883 42 DRAAFIIASTATEDEMLNWYREHVVWAD 69 (180)
Q Consensus 42 DR~AFIiast~teeem~~wy~erVvw~d 69 (180)
|...--.|...-..-+-++|++|+.|.+
T Consensus 38 dlVp~~~a~~~~Pq~VI~fYE~rl~w~~ 65 (68)
T d2fmma1 38 DLVPAKEANVKCPQVVISFYEERLTWHS 65 (68)
T ss_dssp EEEEHHHHHHHCHHHHHHHHHTTEEESS
T ss_pred hheeHHHHHHhCCHHHHHHHHHhcccCC
Confidence 4444445555666678899999999986
No 7
>d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]}
Probab=17.84 E-value=6.7 Score=24.62 Aligned_cols=29 Identities=24% Similarity=0.544 Sum_probs=19.3
Q ss_pred hhhhhhhhhh-hHHHhhhcccHHHHHHHHhh
Q 044883 34 RRCFMLEFDR-AAFIIASTATEDEMLNWYRE 63 (180)
Q Consensus 34 krCfmL~FDR-~AFIiast~teeem~~wy~e 63 (180)
+-||.+.+.. .-|+ -.+.++++|..|+..
T Consensus 82 ~~~f~i~~~~~~~~~-l~a~s~~e~~~Wi~a 111 (123)
T d1wjma_ 82 KHVFKLGLQDGKEYL-FQAKDEAEMSSWLRV 111 (123)
T ss_dssp SSEEEEECSSSCEEE-EECSSHHHHHHHHHH
T ss_pred CcEEEEEcCCCcEEE-EECCCHHHHHHHHHH
Confidence 3578877743 3343 345589999999863
No 8
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=17.68 E-value=24 Score=28.75 Aligned_cols=26 Identities=31% Similarity=0.539 Sum_probs=16.7
Q ss_pred hhhhhhhhh-hhhhhHHHhhhcccHHHHHH
Q 044883 31 EDVRRCFML-EFDRAAFIIASTATEDEMLN 59 (180)
Q Consensus 31 eDVkrCfmL-~FDR~AFIiast~teeem~~ 59 (180)
-|||-|||. +++.-.=|+| +--||.+
T Consensus 215 idvkgCFm~Ke~e~yipivA---sAHEmmr 241 (282)
T d1u6ka1 215 VSVEGCFVEQDKERYVPIVA---SAHEMMR 241 (282)
T ss_dssp HHHHHHHTCCCHHHHHHHHH---HHHHHHH
T ss_pred CCchheeeeccHHHhhhHHH---hHHHHHH
Confidence 489999997 6777644444 3445543
No 9
>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}
Probab=16.19 E-value=24 Score=19.98 Aligned_cols=15 Identities=33% Similarity=0.864 Sum_probs=10.8
Q ss_pred Chhhhhhhhhhhhhhh
Q 044883 29 TKEDVRRCFMLEFDRA 44 (180)
Q Consensus 29 TkeDVkrCfmL~FDR~ 44 (180)
|.|+++..|-+ |||-
T Consensus 1 seeel~eAF~~-FDkD 15 (33)
T d2hf5a1 1 SEEEIREAFRV-FDKD 15 (33)
T ss_dssp CHHHHHHHHHH-HSSS
T ss_pred CHHHHHHHHHH-hCCC
Confidence 56788888865 7764
No 10
>d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.11 E-value=6.1 Score=24.50 Aligned_cols=33 Identities=12% Similarity=0.278 Sum_probs=22.0
Q ss_pred hhhhhhhhhhhhhhHHHhhhcccHHHHHHHHhh
Q 044883 31 EDVRRCFMLEFDRAAFIIASTATEDEMLNWYRE 63 (180)
Q Consensus 31 eDVkrCfmL~FDR~AFIiast~teeem~~wy~e 63 (180)
.+-+.||.+.+..--.++-.+.++++|.+|...
T Consensus 65 ~~~~~~F~i~~~~~~~~~f~a~s~~~~~~Wi~a 97 (109)
T d1wgqa_ 65 NSESKVFQLLHKGMVFYVFKADDAHSTQRWIDA 97 (109)
T ss_dssp SCSSSEEEEEETTEEEEEEECSSHHHHHHHHHH
T ss_pred cccceeeeeecccceEEEEECCCHHHHHHHHHH
Confidence 345779988774332333345589999999863
Done!