BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044886
(183 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V0T|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 119/183 (65%), Gaps = 24/183 (13%)
Query: 1 MSAFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKV------------ 47
+S Y + PE IA+ A + GI DTSD+YG + +NE LLGK
Sbjct: 23 LSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREKIQVG 82
Query: 48 ----IYEDG--KYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELK 101
I+E G G P Y+R+ CEASLKRLDVD IDL+ HRIDT VPIE+T+GELK
Sbjct: 83 TKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELK 142
Query: 102 RLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIV 156
+LVEEGKIK++ LSEA TIRRAH +HP+T +++E+SL +RD+++E+ +LGIGIV
Sbjct: 143 KLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIV 202
Query: 157 AYN 159
Y+
Sbjct: 203 PYS 205
>pdb|3V0U|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 338
Score = 157 bits (398), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 119/183 (65%), Gaps = 24/183 (13%)
Query: 1 MSAFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKV------------ 47
+S Y + PE IA+ A + GI DTSD+YG + +NE LLGK
Sbjct: 24 LSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREKIQVG 83
Query: 48 ----IYEDG--KYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELK 101
I+E G G P Y+R+ CEASLKRLDVD IDL+ HRIDT VPIE+T+GELK
Sbjct: 84 TKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELK 143
Query: 102 RLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIV 156
+LVEEGKIK++ LSEA TIRRAH +HP+T +++E+SL +RD+++E+ +LGIGIV
Sbjct: 144 KLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIV 203
Query: 157 AYN 159
Y+
Sbjct: 204 PYS 206
>pdb|3UYI|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 155 bits (393), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 118/183 (64%), Gaps = 24/183 (13%)
Query: 1 MSAFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKV------------ 47
+S Y + PE IA+ A + GI DTSD+YG + +NE LLGK
Sbjct: 24 LSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREKIQVG 83
Query: 48 ----IYEDG--KYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELK 101
I+E G G P Y+R+ CEASLKRLDVD IDL+ HRIDT VPIE+T+GEL
Sbjct: 84 TKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELX 143
Query: 102 RLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIV 156
+LVEEGKIK++ LSEA TIRRAH +HP+T +++E+SL +RD+++E+ +LGIGIV
Sbjct: 144 KLVEEGKIKYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIV 203
Query: 157 AYN 159
Y+
Sbjct: 204 PYS 206
>pdb|3V0S|A Chain A, Crystal Structure Of Perakine Reductase, Founder Member Of
A Novel Akr Subfamily With Unique Conformational Changes
During Nadph Binding
Length = 337
Score = 152 bits (385), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 116/183 (63%), Gaps = 24/183 (13%)
Query: 1 MSAFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKV------------ 47
+S Y + PE IA+ A + GI DTSD+YG + +NE LLGK
Sbjct: 23 LSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVG 82
Query: 48 ----IYEDG--KYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELK 101
I+E G G P Y+R+ CEASLKRLDVD IDL+ HRIDT VPIE+T+GEL
Sbjct: 83 TKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELX 142
Query: 102 RLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIV 156
LVEEGKI ++ LSEA TIRRAH +HP+T +++E+SL +RD+++E+ +LGIGIV
Sbjct: 143 XLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIV 202
Query: 157 AYN 159
Y+
Sbjct: 203 PYS 205
>pdb|1YNP|A Chain A, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNP|B Chain B, Aldo-keto Reductase Akr11c1 From Bacillus Halodurans (apo
Form)
pdb|1YNQ|A Chain A, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
pdb|1YNQ|B Chain B, Aldo-Keto Reductase Akr11c1 From Bacillus Halodurans (Holo
Form)
Length = 317
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 81/176 (46%), Gaps = 22/176 (12%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVI----------------YEDGKYSYCGDP 60
+ + ++ GIN LDT+D+Y NE +GK + +E GK + DP
Sbjct: 53 IMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVGNRFEQGKEGWWWDP 112
Query: 61 --AYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAF 118
AY++ A + SL+RL D IDLY H PI+ TI + L +EG I++ +S
Sbjct: 113 SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIR 172
Query: 119 ASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL----GIGIVAYNLLECEFLSSGP 170
+ I+ I + +++S+ R +E L G+ +V + LS P
Sbjct: 173 PNVIKEYLKRSNIVSIMMQYSILDRRPEEWFPLIQEHGVSVVVRGPVARGLLSRRP 228
>pdb|3ERP|A Chain A, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
pdb|3ERP|B Chain B, Structure Of Idp01002, A Putative Oxidoreductase From And
Essential Gene Of Salmonella Typhimurium
Length = 353
Score = 63.2 bits (152), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 16 ALTNHAIDSGINVLDTSDVYGP--HTNEILLGKVIYED--------------------GK 53
AL A D GI D ++ YGP + E G+++ ED G
Sbjct: 68 ALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGP 127
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID 113
Y G YL A+ + SLKR+ ++ +D++ HR D + P++ T+ L LV GK ++
Sbjct: 128 YGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVG 187
Query: 114 LSEAFASTIRRAHTI-----HPITVVRLEWSLRSRDVKEEM-----ELGIGIVAYNLL 161
+S A R+A I P + + ++SL R V++ + E G+G +A++ L
Sbjct: 188 ISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIAFSPL 245
>pdb|3N2T|A Chain A, Structure Of The Glycerol Dehydrogenase Akr11b4 From
Gluconobacter Oxydans
Length = 348
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 21/150 (14%)
Query: 21 AIDSGINVLDTSDVYGPHTNEILLGKVIYEDGKYSYCGD--------------------- 59
A+D GIN++DT+ VYG +E ++G+ + E ++
Sbjct: 61 ALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSR 120
Query: 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFA 119
PA +R E SL+RL V+ IDL H D K PI+ + EL++L ++GKI+ + +S
Sbjct: 121 PARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSP 180
Query: 120 STIRRAHTIHPITVVRLEWSLRSRDVKEEM 149
+ + P+ ++ +L R +++++
Sbjct: 181 EQMDIFREVAPLATIQPPLNLFERTIEKDI 210
>pdb|1PYF|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Apo)
pdb|1PZ0|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11a(Holo)
Length = 312
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 17/158 (10%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDGK------------- 53
P+ E L AI +G+ LDT+ +YG +E L+G+V+ E +
Sbjct: 30 PNLNEETGKELVREAIRNGVTXLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRK 89
Query: 54 ----YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKI 109
+ + P +L+ + + SLKRL+ D IDL+ H D P + + L + GKI
Sbjct: 90 QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEXKKAGKI 149
Query: 110 KHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKE 147
+ I +S ++ A+ + V++ E++L +R+ ++
Sbjct: 150 RSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEK 187
>pdb|1PZ1|A Chain A, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
pdb|1PZ1|B Chain B, Structure Of Nadph-Dependent Family 11 Aldo-Keto Reductase
Akr11b(Holo)
Length = 333
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 11 ESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDGKYSYC------------- 57
E I A+D GI ++DT+ YG +E ++GK I E K
Sbjct: 33 EKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYXKRDQVILATKTALDWKNN 92
Query: 58 -----GDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHI 112
+ A + E SLKRL D IDLY H D VPIE T K L + GKI+ I
Sbjct: 93 QLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVXKELYDAGKIRAI 152
Query: 113 DLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEM 149
+S + P+ ++ ++L R+ +E +
Sbjct: 153 GVSNFSIEQXDTFRAVAPLHTIQPPYNLFEREXEESV 189
>pdb|4AUB|A Chain A, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|B Chain B, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|C Chain C, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|D Chain D, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|E Chain E, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|F Chain F, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|G Chain G, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
pdb|4AUB|H Chain H, The Complex Structure Of The Bacterial Aldo-Keto Reductase
Akr14a1 With Nadp And Citrate
Length = 366
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 16 ALTNHAIDSGINVLDTSDVYGP--HTNEILLGKVIYED--------------------GK 53
A+ A D GI D ++ YGP + E G+++ ED G
Sbjct: 67 AILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGP 126
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID 113
Y G YL A+ + SLKR+ ++ +D++ HR+D P+E T L V+ GK ++
Sbjct: 127 YGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVG 186
Query: 114 LS 115
+S
Sbjct: 187 IS 188
>pdb|3N6Q|A Chain A, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|B Chain B, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|C Chain C, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|D Chain D, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|E Chain E, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|F Chain F, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|G Chain G, Crystal Structure Of Yghz From E. Coli
pdb|3N6Q|H Chain H, Crystal Structure Of Yghz From E. Coli
pdb|4AST|A Chain A, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|B Chain B, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|C Chain C, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|D Chain D, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|E Chain E, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|F Chain F, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|G Chain G, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
pdb|4AST|H Chain H, The Apo Structure Of A Bacterial Aldo-Keto Reductase
Akr14a1
Length = 346
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 16 ALTNHAIDSGINVLDTSDVYGP--HTNEILLGKVIYED--------------------GK 53
A+ A D GI D ++ YGP + E G+++ ED G
Sbjct: 47 AILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGP 106
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID 113
Y G YL A+ + SLKR+ ++ +D++ HR+D P+E T L V+ GK ++
Sbjct: 107 YGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVG 166
Query: 114 LS 115
+S
Sbjct: 167 IS 168
>pdb|1ZSX|A Chain A, Crystal Structure Of Human Potassium Channel Kv
Beta-Subunit (Kcnab2)
Length = 347
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 59 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 118
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 119 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 178
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ ++ R + P + E+ + R+ K E++L G+G + ++ L C
Sbjct: 179 SMEIMEAY--SVARQFNLTPPICEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 235
Query: 164 EFLS 167
+S
Sbjct: 236 GIVS 239
>pdb|3LUT|A Chain A, A Structural Model For The Full-Length Shaker Potassium
Channel Kv1.2
Length = 367
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 72 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 131
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 132 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 191
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 192 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 248
Query: 164 EFLS 167
+S
Sbjct: 249 GIVS 252
>pdb|1QRQ|A Chain A, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|B Chain B, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|C Chain C, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
pdb|1QRQ|D Chain D, Structure Of A Voltage-Dependent K+ Channel Beta Subunit
Length = 325
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 37 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 96
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 97 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 156
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 157 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 213
Query: 164 EFLS 167
+S
Sbjct: 214 GIVS 217
>pdb|3EAU|A Chain A, Voltage-Dependent K+ Channel Beta Subunit In Complex With
Cortisone
Length = 327
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 38 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 97
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 98 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 158 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 214
Query: 164 EFLS 167
+S
Sbjct: 215 GIVS 218
>pdb|1EXB|A Chain A, Structure Of The Cytoplasmic Beta Subunit-T1 Assembly Of
Voltage-Dependent K Channels
Length = 332
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 37 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 96
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 97 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 156
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 157 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 213
Query: 164 EFLS 167
+S
Sbjct: 214 GIVS 217
>pdb|2A79|A Chain A, Mammalian Shaker Kv1.2 Potassium Channel- Beta Subunit
Complex
pdb|2R9R|A Chain A, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|2R9R|G Chain G, Shaker Family Voltage Dependent Potassium Channel
(Kv1.2-Kv2.1 Paddle Chimera Channel) In Association With
Beta Subunit
pdb|3LNM|A Chain A, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
pdb|3LNM|C Chain C, F233w Mutant Of The Kv2.1 Paddle-Kv1.2 Chimera Channel
Length = 333
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 87/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 38 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 97
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 98 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 158 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 214
Query: 164 EFLS 167
+S
Sbjct: 215 GIVS 218
>pdb|3EB4|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (I211r) In
Complex With Cortisone
Length = 327
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------KYSYCGDPAYLRA- 65
L A D+GIN+ DT++VY E++LG +I + G K + G R
Sbjct: 38 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGL 97
Query: 66 -------ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
+ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 98 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ ++ R + P + E+ + R+ K E++L G+G + ++ L C
Sbjct: 158 SMEIMEAY--SVARQFNLIPPRCEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 214
Query: 164 EFLS 167
+S
Sbjct: 215 GIVS 218
>pdb|3EB3|A Chain A, Voltage-Dependent K+ Channel Beta Subunit (W121a) In
Complex With Cortisone
Length = 327
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 88/184 (47%), Gaps = 36/184 (19%)
Query: 17 LTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDGKYS---------YCGDPA------ 61
L A D+GIN+ DT++VY E++LG +I + G + G A
Sbjct: 38 LMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFAGGKAETERGL 97
Query: 62 ---YLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG--------KIK 110
++ +ASL+RL ++ +D+ +R D P+E T+ + ++ +G +
Sbjct: 98 SRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWS 157
Query: 111 HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKEEMEL-------GIGIVAYNLLEC 163
+++ EA+ S R+ + I PI + E+ + R+ K E++L G+G + ++ L C
Sbjct: 158 SMEIMEAY-SVARQFNLIPPI-CEQAEYHMFQRE-KVEVQLPELFHKIGVGAMTWSPLAC 214
Query: 164 EFLS 167
+S
Sbjct: 215 GIVS 218
>pdb|2BP1|A Chain A, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|B Chain B, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|C Chain C, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
pdb|2BP1|D Chain D, Structure Of The Aflatoxin Aldehyde Reductase In Complex
With Nadph
Length = 360
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFA 119
P +R+ E SLKRL +DL+ H D P+E T+ +RL +EGK + LS +A
Sbjct: 117 PDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSN-YA 175
Query: 120 S-------TIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIVAYNLL 161
S T+ +++ TV + ++ +R V+ E+ G+ AYN L
Sbjct: 176 SWEVAEICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYAYNPL 229
>pdb|2C91|A Chain A, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|B Chain B, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|C Chain C, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|D Chain D, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|E Chain E, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|F Chain F, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|G Chain G, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|H Chain H, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|I Chain I, Mouse Succinic Semialdehyde Reductase, Akr7a5
pdb|2C91|J Chain J, Mouse Succinic Semialdehyde Reductase, Akr7a5
Length = 338
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFA 119
P +R+ E SLKRL +DL+ H D P+E T+ +L +EGK + LS +A
Sbjct: 95 PDSIRSQLETSLKRLQCPRVDLFYLHAPDHSTPVEETLCACHQLHQEGKFVELGLSN-YA 153
Query: 120 S-------TIRRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIVAYNLL 161
S T+ +++ TV + ++ +R V+ E+ G+ AYN L
Sbjct: 154 SWEVAEICTLCKSNGWILPTVYQGMYNATTRQVEAELLPCLRHFGLRFYAYNPL 207
>pdb|3KRB|A Chain A, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
pdb|3KRB|B Chain B, Structure Of Aldose Reductase From Giardia Lamblia At
1.75a Resolution
Length = 334
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 28/135 (20%)
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQH------RIDT---------------KVP 92
++Y P +R C+ ++ L VD +DL+ H R D KVP
Sbjct: 94 WNYNHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVP 153
Query: 93 IEVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVK 146
+ T +++LVEEG +KHI +S + + I P+ V ++E W VK
Sbjct: 154 LADTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPL-VNQIEIHPWHPNDATVK 212
Query: 147 EEMELGIGIVAYNLL 161
++ GIG+ AY+ +
Sbjct: 213 FCLDNGIGVTAYSPM 227
>pdb|1GVE|A Chain A, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver
pdb|1GVE|B Chain B, Aflatoxin Aldehyde Reductase (Akr7a1) From Rat Liver
Length = 327
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFA 119
PA +R E SLKRL +DL+ H D PIE T+ +L +EGK + LS +
Sbjct: 84 PADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVS 143
Query: 120 STI-------RRAHTIHPITVVRLEWSLRSRDVKEEM-----ELGIGIVAYNLL 161
+ ++ I P TV + ++ +R V+ E+ G+ A+N L
Sbjct: 144 WEVAEICTLCKKNGWIMP-TVYQGMYNAITRQVETELFPCLRHFGLRFYAFNPL 196
>pdb|1MRQ|A Chain A, Crystal Structure Of Human 20alpha-hsd In Ternary Complex
With Nadp And 20alpha-hydroxy-progesterone
Length = 323
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPH-------TNEILLGKVIYEDGKYS- 55
Y P++ P+S + T AI++G +D++ +Y ++I G V ED Y+
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 56 --YCGD--PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
+C P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 84 KLWCNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|3GUG|A Chain A, Crystal Structure Of Akr1c1 L308v Mutant In Complex With
Nadp And 3,5-Dichlorosalicylic Acid
Length = 323
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPH-------TNEILLGKVIYEDGKYS- 55
Y P++ P+S + T AI++G +D++ +Y ++I G V ED Y+
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 56 --YCGD--PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
+C P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 84 KLWCNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|3C3U|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And 3,5-
Dichlorosalicylic Acid
pdb|3NTY|A Chain A, Crystal Structure Of Akr1c1 In Complex With Nadp And
5-Phenyl,3- Chlorosalicylic Acid
Length = 323
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 18/108 (16%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPH-------TNEILLGKVIYEDGKYS- 55
Y P++ P+S + T AI++G +D++ +Y ++I G V ED Y+
Sbjct: 24 YAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 56 --YCGD--PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
+C P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 84 KLWCNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|2CLP|A Chain A, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|B Chain B, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|C Chain C, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|D Chain D, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|E Chain E, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|F Chain F, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|G Chain G, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|H Chain H, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|I Chain I, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|J Chain J, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
pdb|2CLP|K Chain K, Crystal Structure Of Human Aflatoxin B1 Aldehyde Reductase
Member 3
Length = 347
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS 115
P LR E SLKRL +DL+ H D P+E T+ +L +EGK + LS
Sbjct: 104 PDSLRFQLETSLKRLQCPRVDLFYLHMPDHSTPVEETLRACHQLHQEGKFVELGLS 159
>pdb|2IPF|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp+ And Epi-Testosterone
pdb|2IPF|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp+ And Epi-Testosterone
Length = 318
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGP--HTNE-----ILLGKVIYEDGKYS---YCGD 59
P+S LT AID+G + D++ VY H E I G V ED Y+ +C
Sbjct: 25 PKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTS 84
Query: 60 --PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-GKI 109
P +RA+ E SL++L D +DLY H P+ + GE V+E GK+
Sbjct: 85 LHPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKL 132
>pdb|2HE5|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|C Chain C, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE5|D Chain D, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Binary Complex With Nadp(H) In An Open Conformation
pdb|2HE8|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Its Apo- Form
pdb|2HE8|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Its Apo- Form
pdb|2HEJ|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp(H) In A Closed Conformation
pdb|2HEJ|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
In Complex With Nadp(H) In A Closed Conformation
pdb|2P5N|A Chain A, Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase In Complex With Coenzyme Nadph
pdb|2P5N|B Chain B, Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase In Complex With Coenzyme Nadph
Length = 323
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGP--HTNE-----ILLGKVIYEDGKYS---YCGD 59
P+S LT AID+G + D++ VY H E I G V ED Y+ +C
Sbjct: 30 PKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTS 89
Query: 60 --PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-GKI 109
P +RA+ E SL++L D +DLY H P+ + GE V+E GK+
Sbjct: 90 LHPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKL 137
>pdb|3CV6|A Chain A, The Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase Gg225.226pp Mutant In Complex With
Inhibitor And Cofactor Nadp+.
pdb|3CV6|B Chain B, The Crystal Structure Of Mouse 17-Alpha Hydroxysteroid
Dehydrogenase Gg225.226pp Mutant In Complex With
Inhibitor And Cofactor Nadp+
Length = 323
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGP--HTNE-----ILLGKVIYEDGKYS---YCGD 59
P+S LT AID+G + D++ VY H E I G V ED Y+ +C
Sbjct: 30 PKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTS 89
Query: 60 --PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-GKI 109
P +RA+ E SL++L D +DLY H P+ + GE V+E GK+
Sbjct: 90 LHPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKL 137
>pdb|3FJN|A Chain A, The Crystal Structure Of 17-Alpha Hydroxysteroid
Dehydrogenase Y224d Mutant.
pdb|3FJN|B Chain B, The Crystal Structure Of 17-Alpha Hydroxysteroid
Dehydrogenase Y224d Mutant
Length = 323
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGP--HTNE-----ILLGKVIYEDGKYS---YCGD 59
P+S LT AID+G + D++ VY H E I G V ED Y+ +C
Sbjct: 30 PKSKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTS 89
Query: 60 --PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-GKI 109
P +RA+ E SL++L D +DLY H P+ + GE V+E GK+
Sbjct: 90 LHPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKL 137
>pdb|3UP8|A Chain A, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
pdb|3UP8|B Chain B, Crystal Structure Of A Putative 2,5-Diketo-D-Gluconic Acid
Reductase B
Length = 298
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 20 HAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG-------------KYSYCGDPAYLRAA 66
A+ G +DT+ +YG NE +G+ I + G +Y D A++ A+
Sbjct: 55 QALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYRHD-AFI-AS 109
Query: 67 CEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAH 126
+ SL++L D +DL H + VP IG L + GK++HI +S + A
Sbjct: 110 VDESLRKLRTDHVDLLLLHWPGSDVPXAERIGALNEVRNAGKVRHIGISNFNTTQXEEAA 169
Query: 127 TIH--PITVVRLEWSL---RSRDVKEEMELGIGIVAY 158
+ PI ++E+ +++ ++ LG + +Y
Sbjct: 170 RLSDAPIATNQVEYHPYLDQTKVLQTARRLGXSLTSY 206
>pdb|2IPG|A Chain A, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
Mutant K31a In Complex With Nadp+ And Epi-Testosterone
pdb|2IPG|B Chain B, Crystal Structure Of 17alpha-Hydroxysteroid Dehydrogenase
Mutant K31a In Complex With Nadp+ And Epi-Testosterone
Length = 319
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGP--HTNE-----ILLGKVIYEDGKYS---YCGD 59
P S LT AID+G + D++ VY H E I G V ED Y+ +C
Sbjct: 26 PASKAKELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRREDIFYTSKVWCTS 85
Query: 60 --PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-GKI 109
P +RA+ E SL++L D +DLY H P+ + GE V+E GK+
Sbjct: 86 LHPELVRASLERSLQKLQFDYVDLYLIH-----YPMALKPGEENFPVDEHGKL 133
>pdb|1IHI|A Chain A, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid
DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2)
COMPLEXED With Nadp+ And Ursodeoxycholate
pdb|1IHI|B Chain B, Crystal Structure Of Human Type Iii 3-Alpha-Hydroxysteroid
DehydrogenaseBILE ACID BINDING PROTEIN (AKR1C2)
COMPLEXED With Nadp+ And Ursodeoxycholate
pdb|2HDJ|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H)
pdb|2HDJ|B Chain B, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H)
Length = 323
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 24/111 (21%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVI 48
Y P++ P+S + AI++G + +D++ VY NE +G +
Sbjct: 24 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGSVKREDIF 80
Query: 49 YEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
Y +S P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|1J96|A Chain A, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And
Testosterone
pdb|1J96|B Chain B, Human 3alpha-Hsd Type 3 In Ternary Complex With Nadp And
Testosterone
Length = 323
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 24/111 (21%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVI 48
Y P++ P+S + AI++G + +D++ VY NE +G +
Sbjct: 24 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGSVKREDIF 80
Query: 49 YEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
Y +S P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 81 YTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 126
>pdb|1XJB|A Chain A, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H), Citrate And
Acetate Molecules
pdb|1XJB|B Chain B, Crystal Structure Of Human Type 3 3alpha-Hydroxysteroid
Dehydrogenase In Complex With Nadp(H), Citrate And
Acetate Molecules
Length = 325
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 49/111 (44%), Gaps = 24/111 (21%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVI 48
Y P++ P+S + AI++G + +D++ VY NE +G +
Sbjct: 26 YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGSVKREDIF 82
Query: 49 YEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
Y +S P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 83 YTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 128
>pdb|2FVL|A Chain A, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
pdb|2FVL|B Chain B, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
pdb|2FVL|C Chain C, Crystal Structure Of Human 3-alpha
Hydroxysteroid/dihydrodiol Dehydrogenase (akr1c4)
Complexed With Nadp+
Length = 324
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPH-------TNEILLGKVIYEDGKYS---Y 56
P P + + +T AI++G +D++ +Y ++I G V ED Y+ +
Sbjct: 28 PEVPRNRAVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLW 87
Query: 57 CG--DPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
C P ++ A E+SLK+L +D +DLY H P+ + GE
Sbjct: 88 CTFFQPQMVQPALESSLKKLQLDYVDLYLLH-----FPMALKPGE 127
>pdb|3UWE|A Chain A, Akr1c3 Complexed With 3-Phenoxybenzoic Acid
Length = 331
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVIYED 51
P P S + +T AI++G +D++ +Y NE +G + Y
Sbjct: 27 PEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 52 GKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIG-ELKRLVEEGKI 109
+S P +R A E SLK+ +D +DLY H P+ + G EL E GK+
Sbjct: 84 KLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEELSPTDENGKV 137
>pdb|3R43|A Chain A, Akr1c3 Complexed With Mefenamic Acid
pdb|3R58|A Chain A, Akr1c3 Complex With Naproxen
pdb|3R6I|A Chain A, Akr1c3 Complex With Meclofenamic Acid
pdb|3R7M|A Chain A, Akr1c3 Complex With Sulindac
pdb|3R8G|A Chain A, Akr1c3 Complex With Ibuprofen
pdb|3R8H|A Chain A, Akr1c3 Complex With Zomepirac
pdb|3R94|A Chain A, Akr1c3 Complex With Flurbiprofen
pdb|3UFY|A Chain A, Akr1c3 Complex With R-Naproxen
pdb|3UG8|A Chain A, Akr1c3 Complex With Indomethacin At Ph 7.5
pdb|3UGR|A Chain A, Akr1c3 Complex With Indomethacin At Ph 6.8
pdb|4FA3|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
(R)-1-(Naphthalen-2-Ylsulfonyl)piperidine-3- Carboxylic
Acid (86)
pdb|4FAL|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)-N-
Methylbenzamide (80)
pdb|4FAM|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)benzoic
Acid (17)
pdb|4FAM|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 In Complex With
3-((3,4-Dihydroisoquinolin-2(1h)-Yl)sulfonyl)benzoic
Acid (17)
Length = 331
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVIYED 51
P P S + +T AI++G +D++ +Y NE +G + Y
Sbjct: 27 PEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 52 GKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIG-ELKRLVEEGKI 109
+S P +R A E SLK+ +D +DLY H P+ + G EL E GK+
Sbjct: 84 KLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEELSPTDENGKV 137
>pdb|2IPJ|A Chain A, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase
Type 3 Mutant Y24a In Complex With Nadp+ And
Epi-Testosterone
pdb|2IPJ|B Chain B, Crystal Structure Of H3alpha-Hydroxysteroid Dehydrogenase
Type 3 Mutant Y24a In Complex With Nadp+ And
Epi-Testosterone
Length = 321
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 23/105 (21%)
Query: 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVIYEDGKY 54
P+S + AI++G + +D++ VY NE +G + Y +
Sbjct: 28 PKSKALEAVKLAIEAGFHHIDSAHVY---NNEEQVGLAIRSKIADGSVKREDIFYTSKLW 84
Query: 55 SYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGE 99
S P +R A E SLK L +D +DLY H P+ V GE
Sbjct: 85 SNSHRPELVRPALERSLKNLQLDYVDLYLIH-----FPVSVKPGE 124
>pdb|1S1P|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase
(Akr1c3) In Complex With The Non-Steroidal Anti-
Inflammatory Drugs Flufenamic Acid And Indomethacin
pdb|1S1R|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase
(Akr1c3) In Complex With The Non-Steroidal Anti-
Inflammatory Drugs Flufenamic Acid And Indomethacin
pdb|1S2A|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase In
Complex With The Non-Steroidal Anti-Inflammatory Drugs
Flufenamic Acid And Indomethacin
pdb|1S2C|A Chain A, Crystal Structures Of Prostaglandin D2 11-Ketoreductase In
Complex With The Non-Steroidal Anti-Inflammatory Drugs
Flufenamic Acid And Indomethacin
Length = 331
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVIYED 51
P P S + +T AI++G +D++ +Y NE +G + Y
Sbjct: 27 PEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 52 GKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIG-ELKRLVEEGKI 109
+S P +R A E SLK+ +D +DLY H P+ + G EL E GK+
Sbjct: 84 KLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEELSPTDENGKV 137
>pdb|1RY0|A Chain A, Structure Of Prostaglandin F Synthase With Prostaglandin
D2
pdb|1RY0|B Chain B, Structure Of Prostaglandin F Synthase With Prostaglandin
D2
pdb|1RY8|A Chain A, Prostaglandin F Synthase Complexed With Nadph And Rutin
pdb|1RY8|B Chain B, Prostaglandin F Synthase Complexed With Nadph And Rutin
pdb|1XF0|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) Complexed With Delta4-
Androstene-3,17-Dione And Nadp
pdb|2F38|A Chain A, Crystal Structure Of Prostaglandin F Synathase Containing
Bimatoprost
pdb|1ZQ5|A Chain A, Crystal Structure Of Human Androgenic
17beta-Hydroxysteroid Dehydrogenase Type 5 In Complexed
With A Potent Inhibitor Em1404
pdb|2FGB|A Chain A, Crystal Structure Of Human 17bet A-Hydroxysteroid
Dehydrogenase Type 5 In Complexes With Peg And Nadp
pdb|4DBS|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3'-[(4-Nitronaphthalen-1-Yl) Amino]benzoic Acid
pdb|4DBS|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3'-[(4-Nitronaphthalen-1-Yl) Amino]benzoic Acid
pdb|4DBU|A Chain A, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3-((4 -(Trifluoromethyl)phenyl) Amino)benzoic Acid
pdb|4DBU|B Chain B, Crystal Structure Of Human 17beta-Hydroxysteroid
Dehydrogenase Type 5 (Akr1c3) In Complex With Nadp+ And
3-((4 -(Trifluoromethyl)phenyl) Amino)benzoic Acid
Length = 323
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 24/119 (20%)
Query: 7 PSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLG---------------KVIYED 51
P P S + +T AI++G +D++ +Y NE +G + Y
Sbjct: 27 PEVPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTS 83
Query: 52 GKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIG-ELKRLVEEGKI 109
+S P +R A E SLK+ +D +DLY H P+ + G EL E GK+
Sbjct: 84 KLWSTFHRPELVRPALENSLKKAQLDYVDLYLIHS-----PMSLKPGEELSPTDENGKV 137
>pdb|3O0K|A Chain A, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|B Chain B, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|C Chain C, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
pdb|3O0K|D Chain D, Crystal Structure Of AldoKETO REDUCTASE FROM BRUCELLA
MELITENSIS
Length = 283
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 66/149 (44%), Gaps = 15/149 (10%)
Query: 15 IALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG---------KYSYCGDPAYLRA 65
++ + A+ +G +DT+ +YG NE +GK I G + D Y
Sbjct: 53 VSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARADIFLTTKLWNSDQGYEST 109
Query: 66 --ACEASLKRLDVDCIDLYDQHR-IDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTI 122
A + SLK+L D +DLY H + +K T +L EEG++K I +S + +
Sbjct: 110 LKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADL 169
Query: 123 RRAHTIHPITVVRLEWSLRSRDVKEEMEL 151
R +T V + L + ++E+ L
Sbjct: 170 ERLIKESGVTPVLNQIELHPQFQQDELRL 198
>pdb|1Q5M|A Chain A, Binary Complex Of Rabbit 20alpha-Hydroxysteroid
Dehydrogenase With Nadph
pdb|1Q5M|B Chain B, Binary Complex Of Rabbit 20alpha-Hydroxysteroid
Dehydrogenase With Nadph
Length = 322
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPHT-------NEILLGKVIYEDGKYS- 55
Y P + P+S + T AID+G +D++ Y ++I G V ED Y+
Sbjct: 23 YAPEEVPKSKAMEATKIAIDAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVKREDIFYTS 82
Query: 56 --YCG--DPAYLRAACEASLKRLDVDCIDLYDQH 85
+C P +R + E SLK L +D +DLY H
Sbjct: 83 KLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIH 116
>pdb|1Q13|A Chain A, Crystal Structure Of Rabbit 20alpha Hyroxysteroid
Dehydrogenase In Ternary Complex With Nadp And
Testosterone
pdb|1Q13|B Chain B, Crystal Structure Of Rabbit 20alpha Hyroxysteroid
Dehydrogenase In Ternary Complex With Nadp And
Testosterone
Length = 323
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 5 YGPSK-PESGMIALTNHAIDSGINVLDTSDVYGPHT-------NEILLGKVIYEDGKYS- 55
Y P + P+S + T AID+G +D++ Y ++I G V ED Y+
Sbjct: 24 YAPEEVPKSKAMEATKIAIDAGFRHIDSAYFYKNEKEVGLAIRSKIADGTVKREDIFYTS 83
Query: 56 --YCG--DPAYLRAACEASLKRLDVDCIDLYDQH 85
+C P +R + E SLK L +D +DLY H
Sbjct: 84 KLWCTFHRPELVRPSLEDSLKNLQLDYVDLYIIH 117
>pdb|4EXA|A Chain A, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|B Chain B, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|C Chain C, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|D Chain D, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|E Chain E, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXA|F Chain F, Crystal Structure Of The Pa4992, The Putative Aldo-keto
Reductase From Pseudomona Aeruginosa
pdb|4EXB|A Chain A, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|B Chain B, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|C Chain C, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|D Chain D, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|E Chain E, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
pdb|4EXB|F Chain F, Putative Aldo-keto Reductase From Pseudomona Aeruginosa
Length = 292
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 27/135 (20%)
Query: 2 SAFYGPSKPESG-MIALTNHAIDSGINVLDTSDVYG------------PHTNEILLGKVI 48
S F P E+ ++AL A D GIN++DT+ YG + +++ KV
Sbjct: 62 SGFTIPDDREAADLLAL---ARDLGINLIDTAPAYGRSEERLGPLLRGQREHWVIVSKVG 118
Query: 49 YE--DGKYSYCGDPAYLRAACEASLKRLDVDCIDLY----DQHRIDTKVPIEV--TIGEL 100
E DG+ + A+ R + E SLKRL+ D I+L D + +D EV T+ L
Sbjct: 119 EEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAAL 178
Query: 101 KRLVEEGKIKHIDLS 115
KR EG I LS
Sbjct: 179 KR---EGLIGAYGLS 190
>pdb|1OG6|A Chain A, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|B Chain B, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
pdb|1OG6|C Chain C, Ydhf, An Aldo-keto Reductase From E.coli Complexed With
Nadph
Length = 298
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 23/143 (16%)
Query: 14 MIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIY-----------------------E 50
+++ +D G+ +D +D+YG + E G+ + E
Sbjct: 34 LVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREE 93
Query: 51 DGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110
+ Y D ++ + E SL L D +DL HR D + + K L + GK++
Sbjct: 94 NVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVR 153
Query: 111 HIDLSEAFASTIRRAHTIHPITV 133
H +S + + P T+
Sbjct: 154 HFGVSNFTPAQFALLQSRLPFTL 176
>pdb|1UR3|M Chain M, Crystal Structure Of The Apo Form Of The E.Coli Ydhf
Protein
Length = 319
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 23/143 (16%)
Query: 14 MIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIY-----------------------E 50
+++ +D G+ +D +D+YG + E G+ + E
Sbjct: 55 LVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERXEIVSKCGIATTAREE 114
Query: 51 DGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110
+ Y D ++ + E SL L D +DL HR D + K L + GK++
Sbjct: 115 NVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLXDADEVADAFKHLHQSGKVR 174
Query: 111 HIDLSEAFASTIRRAHTIHPITV 133
H +S + + P T+
Sbjct: 175 HFGVSNFTPAQFALLQSRLPFTL 197
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 17/105 (16%)
Query: 21 AIDSGINVLDTSDVYGPHTNEILLGKVIYEDG---------KYSYCGDPAYL--RAACEA 69
A+++G ++DT+ YG NE +G+ I G D + +AA A
Sbjct: 44 ALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDEIYVTTKLATPDQGFTSSQAAARA 100
Query: 70 SLKRLDVDCIDLYDQHRI--DTKVPIEVTIGELKRLVEEGKIKHI 112
SL+RL +D +DLY H DT ++ + G L ++ E+G + I
Sbjct: 101 SLERLGLDYVDLYLIHWPGGDTSKYVD-SWGGLMKVKEDGIARSI 144
>pdb|1LQA|A Chain A, Tas Protein From Escherichia Coli In Complex With Nadph
pdb|1LQA|B Chain B, Tas Protein From Escherichia Coli In Complex With Nadph
Length = 346
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 77/205 (37%), Gaps = 56/205 (27%)
Query: 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYG----PHTN---EILLGKVIYEDG----- 52
+G E+ A ++A+ GIN++D +++Y P T E +G + + G
Sbjct: 23 FGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKL 82
Query: 53 -----------------KYSYCGDPAYLRAACEASLKRLDVDCIDLYDQH---------- 85
+ D +R A SLKRL D +DLY H
Sbjct: 83 IIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFG 142
Query: 86 -----RIDTKVPIEV--TIGELKRLVEEGKIKHIDLSEAFASTIRR------AHTIHPIT 132
D+ + + T+ L GKI++I +S A + R H + I
Sbjct: 143 KLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIV 202
Query: 133 VVRLEWSLRSRDVKEEMELGIGIVA 157
++ +SL +R E+G+ V+
Sbjct: 203 TIQNPYSLLNRS----FEVGLAEVS 223
>pdb|1JEZ|A Chain A, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1JEZ|B Chain B, The Structure Of Xylose Reductase, A Dimeric Aldo-Keto
Reductase From Candida Tenuis
pdb|1K8C|A Chain A, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|B Chain B, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|C Chain C, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1K8C|D Chain D, Crystal Structure Of Dimeric Xylose Reductase In Complex
With Nadp(H)
pdb|1MI3|A Chain A, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|B Chain B, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|C Chain C, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
pdb|1MI3|D Chain D, 1.8 Angstrom Structure Of Xylose Reductase From Candida
Tenuis In Complex With Nadh
Length = 322
Score = 30.4 bits (67), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQH--------RIDTK-----------------VPI 93
DP + A +L L VD +DL+ H I+ K VPI
Sbjct: 88 DPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 147
Query: 94 EVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVKE 147
T L++LV GKIK I +S A + R TI P V+++E + + + ++
Sbjct: 148 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKP-AVLQVEHHPYLQQPKLIEF 206
Query: 148 EMELGIGIVAYN 159
+ G+ I AY+
Sbjct: 207 AQKAGVTITAYS 218
>pdb|1Z9A|A Chain A, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|B Chain B, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|C Chain C, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1Z9A|D Chain D, Crystal Structure Of The Asn-309 To Asp Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
Length = 321
Score = 30.4 bits (67), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQH--------RIDTK-----------------VPI 93
DP + A +L L VD +DL+ H I+ K VPI
Sbjct: 87 DPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 146
Query: 94 EVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVKE 147
T L++LV GKIK I +S A + R TI P V+++E + + + ++
Sbjct: 147 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKP-AVLQVEHHPYLQQPKLIEF 205
Query: 148 EMELGIGIVAYN 159
+ G+ I AY+
Sbjct: 206 AQKAGVTITAYS 217
>pdb|1SM9|A Chain A, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|B Chain B, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|C Chain C, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
pdb|1SM9|D Chain D, Crystal Structure Of An Engineered K274rn276d Double
Mutant Of Xylose Reductase From Candida Tenuis Optimized
To Utilize Nad
Length = 322
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQH--------RIDTK-----------------VPI 93
DP + A +L L VD +DL+ H I+ K VPI
Sbjct: 88 DPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 147
Query: 94 EVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVKE 147
T L++LV GKIK I +S A + R TI P V+++E + + + ++
Sbjct: 148 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKP-AVLQVEHHPYLQQPKLIEF 206
Query: 148 EMELGIGIVAYN 159
+ G+ I AY+
Sbjct: 207 AQKAGVTITAYS 218
>pdb|1YE4|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE4|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nad+
pdb|1YE6|A Chain A, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|B Chain B, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|C Chain C, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
pdb|1YE6|D Chain D, Crystal Structure Of The Lys-274 To Arg Mutant Of Candida
Tenuis Xylose Reductase (Akr2b5) Bound To Nadp+
Length = 322
Score = 30.0 bits (66), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 32/132 (24%)
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQH--------RIDTK-----------------VPI 93
DP + A +L L VD +DL+ H I+ K VPI
Sbjct: 88 DPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 147
Query: 94 EVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVKE 147
T L++LV GKIK I +S A + R TI P V+++E + + + ++
Sbjct: 148 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKP-AVLQVEHHPYLQQPKLIEF 206
Query: 148 EMELGIGIVAYN 159
+ G+ I AY+
Sbjct: 207 AQKAGVTITAYS 218
>pdb|1R38|A Chain A, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|B Chain B, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|C Chain C, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
pdb|1R38|D Chain D, Crystal Structure Of H114a Mutant Of Candida Tenuis Xylose
Reductase
Length = 322
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 32/132 (24%)
Query: 59 DPAYLRAACEASLKRLDVDCIDLY-------------------------DQHRIDTKVPI 93
DP + A +L L VD +DL+ + + VPI
Sbjct: 88 DPKNVETALNKTLADLKVDYVDLFLIAFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPI 147
Query: 94 EVTIGELKRLVEEGKIKHIDLSE---AFASTIRRAHTIHPITVVRLE---WSLRSRDVKE 147
T L++LV GKIK I +S A + R TI P V+++E + + + ++
Sbjct: 148 LETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKP-AVLQVEHHPYLQQPKLIEF 206
Query: 148 EMELGIGIVAYN 159
+ G+ I AY+
Sbjct: 207 AQKAGVTITAYS 218
>pdb|1QWK|A Chain A, Structural Genomics Of Caenorhabditis Elegans:
Hypothetical 35.2 Kda Protein (Aldose Reductase Family
Member)
Length = 317
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 18/87 (20%)
Query: 14 MIALTNHAIDSGINVLDTSDVYGPHTNEILLG---KVIYEDG------------KYSYCG 58
+I A+ +G ++DT+ VY NE +G K + E+G +++
Sbjct: 31 VITAVKTAVKAGYRLIDTASVY---QNEEAIGTAIKELLEEGVVKREELFITTKAWTHEL 87
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQH 85
P L SLK+L ++ +DLY H
Sbjct: 88 APGKLEGGLRESLKKLQLEYVDLYLAH 114
>pdb|3PNN|A Chain A, The Crystal Structure Of A Glycosyltransferase From
Porphyromonas Gingivalis W83
Length = 303
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 47/141 (33%), Gaps = 28/141 (19%)
Query: 18 TNHAIDSG-------INVLDTSDVYGPHTNEILLGKVIYEDGKYS-YCG----------- 58
TNHA+ G V++ D YG + E+L K+ +GK YC
Sbjct: 103 TNHAVLXGRDAIREPFAVINADDFYGRNGFEVLARKLXTLEGKQGEYCXVGYRVGNTLSE 162
Query: 59 DPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK-------- 110
R C+ K L ++ R D + G++ L E+ +
Sbjct: 163 SGGVSRGVCQVDEKHLLTGVVERTGIERTDGTISFRDETGKICTLAEDAPVSXNXWGFTP 222
Query: 111 -HIDLSEAFASTIRRAHTIHP 130
+ D SE AH P
Sbjct: 223 DYFDYSEELFINFLNAHGQEP 243
>pdb|3CGC|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGC|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGD|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(p)h Specificity
pdb|3CGE|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGE|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVT-IGELKRLVEEGKIKHI 112
Y+ CG P + A ++ K + + D++ ID KV EVT + K++V K
Sbjct: 75 YAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTK 134
Query: 113 DLSEAFASTIRRAHTIHPITVVRLEWSLR 141
D+ E + A + P V EW R
Sbjct: 135 DVFEFSYDRLLIATGVRP---VMPEWEGR 160
>pdb|4GAC|A Chain A, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
pdb|4GAC|B Chain B, High Resolution Structure Of Mouse Aldehyde Reductase
(akr1a4) In Its Apo-form
Length = 324
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 20/97 (20%)
Query: 6 GPSKPESGMI-ALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---DGK-------- 53
G K E G + A HA+ +G +D + VYG NE +G+ + E GK
Sbjct: 19 GTWKSEPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVPREELF 75
Query: 54 -----YSYCGDPAYLRAACEASLKRLDVDCIDLYDQH 85
++ P + A +L L ++ +DLY H
Sbjct: 76 VTSKLWNTKHHPEDVEPALRKTLADLQLEYLDLYLMH 112
>pdb|3CGB|A Chain A, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
pdb|3CGB|B Chain B, Pyridine Nucleotide Complexes With Bacillus Anthracis
Coenzyme A- Disulfide Reductase: A Structural Analysis
Of Dual Nad(P)h Specificity
Length = 480
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 54 YSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVT-IGELKRLVEEGKIKHI 112
Y+ CG P + A ++ K + + D++ ID KV EVT + K++V K
Sbjct: 75 YAQCGLPYVISGAIASTEKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTK 134
Query: 113 DLSEAFASTIRRAHTIHPITVVRLEWSLR 141
D+ E + A + P V EW R
Sbjct: 135 DVFEFSYDRLLIATGVRP---VXPEWEGR 160
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 26.6 bits (57), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 35 YGPHTNEILLGKVIYEDGKYSY 56
YG H N I L K +Y+DGKY Y
Sbjct: 72 YGQHPNIITL-KDVYDDGKYVY 92
>pdb|1Z25|A Chain A, Structure Of P.Furiosus Argonaute With Bound Mn2+
pdb|1Z26|A Chain A, Structure Of Pyrococcus Furiosus Argonaute With Bound
Tungstate
Length = 771
Score = 26.6 bits (57), Expect = 9.2, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRL--VEEGKIKHIDLSEAFASTIRRAHTI 128
L+ L + I Y+ ++ K T G+ K + VE IKH E F I H I
Sbjct: 94 LRLLKENGIGEYELSKLLRKFRKPKTFGDYKVIPSVEMSVIKH---DEDFYLVI---HII 147
Query: 129 HPITVVRLEWSLRSRDVKEEMEL 151
H I ++ W L ++D KE E
Sbjct: 148 HQIQSMKTLWELVNKDPKELEEF 170
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Query: 35 YGPHTNEILLGKVIYEDGKYSY 56
YG H N I L K +Y+DGKY Y
Sbjct: 72 YGQHPNIITL-KDVYDDGKYVY 92
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.139 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,602,083
Number of Sequences: 62578
Number of extensions: 224172
Number of successful extensions: 643
Number of sequences better than 100.0: 90
Number of HSP's better than 100.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 546
Number of HSP's gapped (non-prelim): 119
length of query: 183
length of database: 14,973,337
effective HSP length: 93
effective length of query: 90
effective length of database: 9,153,583
effective search space: 823822470
effective search space used: 823822470
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)