Query 044886
Match_columns 183
No_of_seqs 115 out of 1213
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:25:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044886.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044886hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pyf_A IOLS protein; beta-alph 100.0 2.4E-44 8.3E-49 291.1 19.7 169 9-177 32-222 (312)
2 1pz1_A GSP69, general stress p 100.0 9.7E-44 3.3E-48 290.0 19.2 168 5-173 28-218 (333)
3 3n2t_A Putative oxidoreductase 100.0 8.9E-44 3E-48 291.8 18.7 173 5-178 46-244 (348)
4 3v0s_A Perakine reductase; AKR 100.0 5.7E-44 1.9E-48 291.8 13.0 167 3-169 25-215 (337)
5 3eau_A Voltage-gated potassium 100.0 5.5E-43 1.9E-47 284.8 17.2 169 4-172 25-223 (327)
6 3erp_A Putative oxidoreductase 100.0 2.6E-42 8.8E-47 283.6 18.8 169 4-172 56-256 (353)
7 1gve_A Aflatoxin B1 aldehyde r 100.0 9.6E-43 3.3E-47 283.4 15.7 167 5-171 15-206 (327)
8 3n6q_A YGHZ aldo-keto reductas 100.0 3E-42 1E-46 282.5 18.5 168 4-171 35-235 (346)
9 3lut_A Voltage-gated potassium 100.0 1.8E-42 6.2E-47 285.8 17.3 169 4-172 59-257 (367)
10 1ynp_A Oxidoreductase, AKR11C1 100.0 4.1E-42 1.4E-46 278.7 19.0 167 3-169 39-227 (317)
11 2bp1_A Aflatoxin B1 aldehyde r 100.0 2.2E-42 7.4E-47 284.7 16.0 168 5-172 48-240 (360)
12 1lqa_A TAS protein; TIM barrel 100.0 4.6E-41 1.6E-45 275.2 19.0 169 4-172 22-247 (346)
13 1ur3_M Hypothetical oxidoreduc 100.0 8E-41 2.7E-45 271.3 17.7 160 9-168 50-240 (319)
14 4exb_A Putative uncharacterize 100.0 2.1E-40 7.2E-45 265.8 15.3 161 4-169 63-246 (292)
15 3o0k_A Aldo/keto reductase; ss 100.0 3.8E-39 1.3E-43 257.5 18.1 161 3-168 43-220 (283)
16 3up8_A Putative 2,5-diketo-D-g 100.0 4.5E-39 1.5E-43 258.7 18.3 161 3-168 40-216 (298)
17 1qwk_A Aldose reductase, aldo- 100.0 2.8E-39 9.5E-44 262.1 17.1 162 3-170 22-212 (317)
18 3f7j_A YVGN protein; aldo-keto 100.0 5.7E-39 1.9E-43 255.7 18.6 161 3-168 23-199 (276)
19 3buv_A 3-OXO-5-beta-steroid 4- 100.0 7E-39 2.4E-43 260.6 19.2 158 9-170 32-230 (326)
20 3krb_A Aldose reductase; ssgci 100.0 3.4E-39 1.2E-43 263.2 17.3 164 3-171 31-237 (334)
21 3b3e_A YVGN protein; aldo-keto 100.0 9.1E-39 3.1E-43 258.2 19.2 161 3-168 57-233 (310)
22 2wzm_A Aldo-keto reductase; ox 100.0 7.2E-39 2.5E-43 255.9 17.9 160 3-167 28-204 (283)
23 4f40_A Prostaglandin F2-alpha 100.0 5.5E-39 1.9E-43 257.2 17.3 162 3-168 27-211 (288)
24 4gie_A Prostaglandin F synthas 100.0 9.4E-39 3.2E-43 256.1 18.4 164 3-171 30-209 (290)
25 1vbj_A Prostaglandin F synthas 100.0 1.4E-38 4.9E-43 253.9 18.9 159 3-166 26-200 (281)
26 3ln3_A Dihydrodiol dehydrogena 100.0 1.2E-38 4.2E-43 258.9 18.9 162 3-167 23-226 (324)
27 1us0_A Aldose reductase; oxido 100.0 1.3E-38 4.4E-43 258.0 18.6 159 3-166 19-218 (316)
28 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 1.2E-38 4.2E-43 258.9 17.5 157 9-168 29-226 (323)
29 1hw6_A 2,5-diketo-D-gluconic a 100.0 8.1E-39 2.8E-43 255.0 16.0 158 3-165 20-194 (278)
30 4gac_A Alcohol dehydrogenase [ 100.0 1.2E-38 4E-43 258.9 17.1 167 3-174 19-225 (324)
31 1s1p_A Aldo-keto reductase fam 100.0 2E-38 6.7E-43 258.5 18.5 157 9-168 29-226 (331)
32 3o3r_A Aldo-keto reductase fam 100.0 2.8E-38 9.4E-43 256.1 18.1 158 3-165 19-217 (316)
33 1mi3_A Xylose reductase, XR; a 100.0 3.8E-38 1.3E-42 255.9 18.2 159 3-166 22-225 (322)
34 1zgd_A Chalcone reductase; pol 100.0 1.9E-38 6.6E-43 256.6 16.2 159 5-168 30-224 (312)
35 1mzr_A 2,5-diketo-D-gluconate 100.0 3E-38 1E-42 253.6 16.4 157 3-165 42-214 (296)
36 1vp5_A 2,5-diketo-D-gluconic a 100.0 6.7E-38 2.3E-42 251.8 17.6 155 3-164 32-206 (298)
37 3b3d_A YTBE protein, putative 100.0 5.2E-38 1.8E-42 254.3 16.8 164 3-171 57-240 (314)
38 3h7u_A Aldo-keto reductase; st 100.0 8E-38 2.7E-42 255.2 16.5 158 3-165 42-233 (335)
39 2bgs_A Aldose reductase; holoe 100.0 3.1E-37 1.1E-41 252.4 17.0 156 3-164 54-244 (344)
40 3h7r_A Aldo-keto reductase; st 100.0 1.7E-37 5.9E-42 252.9 14.4 149 13-164 46-228 (331)
41 3cf4_A Acetyl-COA decarboxylas 97.8 8.9E-06 3.1E-10 72.8 2.7 97 67-166 231-351 (807)
42 1v5x_A PRA isomerase, phosphor 76.4 8.8 0.0003 28.3 6.7 65 71-138 17-83 (203)
43 2xsa_A Ogoga, hyaluronoglucosa 75.7 31 0.0011 28.7 10.4 100 3-115 8-113 (447)
44 2fkn_A Urocanate hydratase; ro 75.4 11 0.00038 31.8 7.6 65 57-135 193-258 (552)
45 1x87_A Urocanase protein; stru 75.3 11 0.00038 31.7 7.6 66 56-135 191-257 (551)
46 1nsj_A PRAI, phosphoribosyl an 73.4 8.6 0.00029 28.4 6.0 65 71-138 18-84 (205)
47 1uwk_A Urocanate hydratase; hy 73.3 11 0.00038 31.8 7.1 65 57-135 197-262 (557)
48 3gd6_A Muconate cycloisomerase 70.7 22 0.00075 28.7 8.4 145 10-164 142-301 (391)
49 2uyg_A 3-dehydroquinate dehydr 70.2 14 0.00049 25.8 6.2 82 57-145 23-107 (149)
50 2rdx_A Mandelate racemase/muco 70.0 40 0.0014 26.9 11.9 140 10-164 145-300 (379)
51 1olt_A Oxygen-independent copr 69.4 12 0.00041 30.9 6.7 61 56-118 215-291 (457)
52 3jx9_A Putative phosphoheptose 66.1 6.7 0.00023 28.1 4.0 88 12-116 25-112 (170)
53 3eez_A Putative mandelate race 65.0 52 0.0018 26.3 9.6 142 9-164 144-300 (378)
54 3ijw_A Aminoglycoside N3-acety 64.4 7.3 0.00025 30.1 4.1 52 64-115 17-74 (268)
55 3qtp_A Enolase 1; glycolysis, 64.3 61 0.0021 26.9 14.0 143 4-159 215-380 (441)
56 2xvc_A ESCRT-III, SSO0910; cel 64.1 6.4 0.00022 22.9 2.8 21 91-111 37-57 (59)
57 2p8b_A Mandelate racemase/muco 63.3 54 0.0018 25.9 10.8 142 10-163 141-299 (369)
58 3otr_A Enolase; structural gen 63.2 65 0.0022 26.8 10.5 146 3-159 218-383 (452)
59 2nyg_A YOKD protein; PFAM02522 62.0 9.5 0.00032 29.5 4.4 52 64-115 15-72 (273)
60 1h05_A 3-dehydroquinate dehydr 61.9 37 0.0013 23.6 7.6 82 57-145 26-109 (146)
61 3sma_A FRBF; N-acetyl transfer 61.7 14 0.00048 28.8 5.3 53 63-115 23-81 (286)
62 2c4w_A 3-dehydroquinate dehydr 58.0 25 0.00087 25.2 5.6 82 57-145 33-119 (176)
63 2o56_A Putative mandelate race 57.0 75 0.0025 25.5 13.4 143 9-161 151-326 (407)
64 2ps2_A Putative mandelate race 56.5 53 0.0018 26.0 8.1 141 10-164 146-302 (371)
65 1gqo_A Dehydroquinase; dehydra 56.4 35 0.0012 23.7 6.0 80 57-145 24-107 (143)
66 2pgw_A Muconate cycloisomerase 50.9 92 0.0031 24.8 12.9 143 10-164 147-304 (384)
67 2p0o_A Hypothetical protein DU 50.5 29 0.001 28.1 5.6 145 5-163 10-182 (372)
68 1pii_A N-(5'phosphoribosyl)ant 49.6 42 0.0014 27.9 6.6 63 72-138 272-335 (452)
69 3q45_A Mandelate racemase/muco 46.9 1.1E+02 0.0036 24.3 11.6 144 10-164 140-298 (368)
70 1gtz_A 3-dehydroquinate dehydr 46.8 49 0.0017 23.3 5.5 80 57-145 30-114 (156)
71 2yr1_A 3-dehydroquinate dehydr 46.0 94 0.0032 23.5 9.0 28 9-36 97-125 (257)
72 2qde_A Mandelate racemase/muco 45.0 1.2E+02 0.004 24.3 11.8 144 10-164 145-303 (397)
73 2ph5_A Homospermidine synthase 44.8 10 0.00035 31.9 2.1 21 13-33 95-115 (480)
74 2nql_A AGR_PAT_674P, isomerase 44.8 1.2E+02 0.004 24.2 13.1 142 10-164 164-321 (388)
75 3mwc_A Mandelate racemase/muco 42.6 1.3E+02 0.0045 24.2 12.5 140 11-164 164-318 (400)
76 3n8k_A 3-dehydroquinate dehydr 42.1 92 0.0032 22.2 8.0 82 57-145 52-135 (172)
77 3sjn_A Mandelate racemase/muco 40.1 36 0.0012 27.2 4.7 141 10-160 146-304 (374)
78 2ox4_A Putative mandelate race 39.5 1.4E+02 0.0049 23.7 12.2 143 9-161 145-320 (403)
79 1ydn_A Hydroxymethylglutaryl-C 38.9 1.1E+02 0.0039 23.2 7.3 78 58-138 23-100 (295)
80 2qdd_A Mandelate racemase/muco 38.9 1.4E+02 0.0049 23.5 10.8 138 10-163 145-299 (378)
81 3dg3_A Muconate cycloisomerase 38.0 1.5E+02 0.0051 23.4 14.0 144 10-164 139-298 (367)
82 1ydo_A HMG-COA lyase; TIM-barr 37.8 1.4E+02 0.0048 23.1 9.2 27 6-32 22-48 (307)
83 3lte_A Response regulator; str 37.3 51 0.0017 20.8 4.4 60 77-139 49-111 (132)
84 1mli_A Muconolactone isomerase 36.9 69 0.0024 20.6 4.7 49 97-145 28-88 (96)
85 1nu5_A Chloromuconate cycloiso 36.3 1.6E+02 0.0053 23.2 13.4 143 10-164 142-302 (370)
86 3kip_A 3-dehydroquinase, type 35.5 89 0.003 22.2 5.5 80 57-144 38-123 (167)
87 2cw6_A Hydroxymethylglutaryl-C 35.2 1.5E+02 0.0051 22.7 9.9 27 6-32 21-47 (298)
88 3ngj_A Deoxyribose-phosphate a 34.6 45 0.0015 25.2 4.1 29 9-37 154-182 (239)
89 3kht_A Response regulator; PSI 34.4 92 0.0031 20.0 6.1 63 73-138 46-112 (144)
90 3my9_A Muconate cycloisomerase 33.7 1.8E+02 0.006 23.1 10.8 145 10-164 146-305 (377)
91 2ztj_A Homocitrate synthase; ( 33.7 1.8E+02 0.0062 23.2 10.6 27 6-32 19-45 (382)
92 3nhm_A Response regulator; pro 33.6 58 0.002 20.6 4.2 60 77-139 46-108 (133)
93 3ro6_B Putative chloromuconate 33.5 1.7E+02 0.0059 22.9 9.7 145 9-164 139-299 (356)
94 1z41_A YQJM, probable NADH-dep 33.4 1E+02 0.0034 24.2 6.2 78 59-137 227-307 (338)
95 1uqr_A 3-dehydroquinate dehydr 33.0 35 0.0012 24.0 3.0 80 57-145 25-108 (154)
96 2r14_A Morphinone reductase; H 32.8 72 0.0025 25.6 5.3 89 63-154 256-346 (377)
97 3jva_A Dipeptide epimerase; en 32.6 1.8E+02 0.0061 22.8 13.7 141 10-161 139-294 (354)
98 3qy7_A Tyrosine-protein phosph 31.8 55 0.0019 24.8 4.3 128 9-142 17-168 (262)
99 3gr7_A NADPH dehydrogenase; fl 31.4 1.6E+02 0.0056 23.1 7.2 74 65-138 232-308 (340)
100 3ivs_A Homocitrate synthase, m 30.5 2.2E+02 0.0077 23.2 11.2 28 6-33 55-82 (423)
101 2jwk_A Protein TOLR; periplasm 30.3 41 0.0014 19.6 2.7 46 59-108 28-73 (74)
102 2zad_A Muconate cycloisomerase 30.2 1.9E+02 0.0066 22.4 13.0 145 10-164 139-297 (345)
103 2qgy_A Enolase from the enviro 30.0 2.1E+02 0.0071 22.7 14.6 142 9-160 148-304 (391)
104 2al1_A Enolase 1, 2-phospho-D- 29.7 2.3E+02 0.0079 23.1 9.9 126 10-158 220-372 (436)
105 3hgj_A Chromate reductase; TIM 29.6 1.2E+02 0.004 23.9 6.1 78 59-137 237-318 (349)
106 2gl5_A Putative dehydratase pr 28.1 2.3E+02 0.0078 22.6 14.0 141 10-160 150-328 (410)
107 3i4k_A Muconate lactonizing en 28.0 2.3E+02 0.0077 22.5 14.7 145 10-164 148-308 (383)
108 3gt7_A Sensor protein; structu 27.6 1.3E+02 0.0045 19.6 7.7 66 71-139 44-113 (154)
109 1zke_A Hypothetical protein HP 27.5 52 0.0018 20.2 2.7 28 61-88 15-42 (83)
110 1vyr_A Pentaerythritol tetrani 27.4 1.4E+02 0.0049 23.6 6.2 66 65-137 254-323 (364)
111 3va8_A Probable dehydratase; e 27.2 2.6E+02 0.0088 22.9 7.9 147 5-164 186-347 (445)
112 1li5_A Cysrs, cysteinyl-tRNA s 27.2 88 0.003 25.8 5.0 47 60-110 89-135 (461)
113 3l5l_A Xenobiotic reductase A; 27.1 1.6E+02 0.0055 23.3 6.5 72 66-137 250-325 (363)
114 3gl9_A Response regulator; bet 26.9 1.2E+02 0.004 18.9 6.9 64 73-139 41-108 (122)
115 3bjs_A Mandelate racemase/muco 26.1 2.6E+02 0.0089 22.6 12.0 137 10-158 184-338 (428)
116 3cnb_A DNA-binding response re 26.1 1.3E+02 0.0044 19.0 5.8 59 78-139 54-116 (143)
117 1sjd_A N-acylamino acid racema 26.1 2.4E+02 0.0081 22.1 13.2 141 10-164 141-296 (368)
118 2vvp_A Ribose-5-phosphate isom 25.6 1.8E+02 0.0061 20.5 7.3 79 57-136 11-90 (162)
119 1sfl_A 3-dehydroquinate dehydr 25.4 2.1E+02 0.0071 21.2 8.0 27 9-35 80-107 (238)
120 2ovl_A Putative racemase; stru 25.4 2.5E+02 0.0084 22.1 13.7 139 10-160 146-301 (371)
121 1ucr_A Protein DSVD; dissimila 25.2 97 0.0033 19.0 3.7 28 89-116 32-59 (78)
122 3t6k_A Response regulator rece 25.2 1.4E+02 0.0047 19.0 6.0 60 77-139 47-110 (136)
123 1nvm_A HOA, 4-hydroxy-2-oxoval 25.2 1.9E+02 0.0065 22.7 6.5 94 64-158 32-139 (345)
124 3u80_A 3-dehydroquinate dehydr 25.1 1.8E+02 0.006 20.3 6.1 81 57-144 28-113 (151)
125 1jbe_A Chemotaxis protein CHEY 24.9 1.3E+02 0.0044 18.6 7.5 62 75-139 46-111 (128)
126 3c8z_A Cysteinyl-tRNA syntheta 24.7 1.8E+02 0.006 23.5 6.4 47 60-110 106-152 (414)
127 3ozy_A Putative mandelate race 24.3 2.7E+02 0.0092 22.1 12.4 140 9-159 150-305 (389)
128 2zay_A Response regulator rece 24.2 1.4E+02 0.0049 19.0 5.0 59 78-139 52-114 (147)
129 4e8g_A Enolase, mandelate race 24.2 2.7E+02 0.0094 22.2 8.3 143 9-164 163-321 (391)
130 1qbj_A Protein (double-strande 24.2 66 0.0023 19.7 2.9 21 93-113 41-61 (81)
131 3eyy_A Putative iron uptake re 23.8 62 0.0021 22.0 3.0 28 89-116 48-75 (145)
132 3tqo_A Cysteinyl-tRNA syntheta 23.7 99 0.0034 25.7 4.7 64 41-110 75-138 (462)
133 3fv9_G Mandelate racemase/muco 23.4 2.8E+02 0.0096 22.0 11.1 144 9-164 144-306 (386)
134 3nl6_A Thiamine biosynthetic b 23.3 2.8E+02 0.0096 23.4 7.5 34 101-136 102-137 (540)
135 1vp8_A Hypothetical protein AF 23.3 2.2E+02 0.0076 20.8 6.6 82 82-164 18-110 (201)
136 2gou_A Oxidoreductase, FMN-bin 23.2 1.8E+02 0.0062 23.0 6.1 84 64-154 252-340 (365)
137 1tv8_A MOAA, molybdenum cofact 23.1 2.5E+02 0.0087 21.4 9.6 95 9-108 50-160 (340)
138 3ose_A Serine/threonine-protei 23.0 55 0.0019 21.7 2.5 23 57-79 36-58 (120)
139 3sp1_A Cysteinyl-tRNA syntheta 22.9 1.1E+02 0.0038 25.7 4.9 46 61-110 120-165 (501)
140 2csx_A Methionyl-tRNA syntheta 22.9 1E+02 0.0035 25.4 4.7 48 60-110 73-120 (497)
141 3guv_A Site-specific recombina 22.4 94 0.0032 21.3 3.8 49 66-115 61-112 (167)
142 3ddm_A Putative mandelate race 22.2 3E+02 0.01 21.9 8.8 139 11-159 156-309 (392)
143 2lnb_A Z-DNA-binding protein 1 22.2 82 0.0028 19.4 2.9 25 93-117 48-72 (80)
144 2heo_A Z-DNA binding protein 1 22.1 88 0.003 18.0 3.1 20 92-111 38-57 (67)
145 1icp_A OPR1, 12-oxophytodienoa 22.0 3E+02 0.01 21.8 11.7 87 64-153 258-347 (376)
146 1qgp_A Protein (double strande 21.8 85 0.0029 18.8 3.0 21 93-113 45-65 (77)
147 2zc8_A N-acylamino acid racema 21.7 2.9E+02 0.0099 21.6 11.4 140 10-163 141-294 (369)
148 1zat_A L,D-transpeptidase; L,D 21.7 39 0.0013 25.2 1.8 34 2-36 81-114 (250)
149 1r0m_A N-acylamino acid racema 21.7 2.9E+02 0.01 21.6 12.7 140 10-163 148-301 (375)
150 3u1f_A Methionyl-tRNA syntheta 21.6 1.1E+02 0.0037 25.6 4.6 47 61-110 78-124 (542)
151 2hsa_B 12-oxophytodienoate red 21.5 3.2E+02 0.011 22.0 7.3 87 64-153 262-365 (402)
152 1k66_A Phytochrome response re 21.4 1.6E+02 0.0056 18.6 5.8 60 77-139 61-124 (149)
153 1jak_A Beta-N-acetylhexosamini 21.2 81 0.0028 26.5 3.7 24 6-29 225-248 (512)
154 4dlp_A Aminoacyl-tRNA syntheta 21.2 1.1E+02 0.0038 25.6 4.6 47 61-110 94-140 (536)
155 2xig_A Ferric uptake regulatio 21.1 1.3E+02 0.0043 20.5 4.2 27 90-116 58-84 (150)
156 2i7g_A Monooxygenase, AGR_C_41 20.8 2.7E+02 0.0091 21.9 6.7 44 58-104 309-352 (376)
157 2og9_A Mandelate racemase/muco 20.7 3.2E+02 0.011 21.6 13.2 138 10-159 162-316 (393)
158 1r30_A Biotin synthase; SAM ra 20.7 3E+02 0.01 21.4 7.0 94 9-108 99-208 (369)
159 3mwm_A ZUR, putative metal upt 20.3 1.4E+02 0.0046 20.0 4.2 28 89-116 44-71 (139)
160 1k68_A Phytochrome response re 20.2 1.7E+02 0.0057 18.2 7.5 60 77-139 54-117 (140)
161 1kko_A 3-methylaspartate ammon 20.1 3.4E+02 0.012 21.8 9.8 92 71-164 261-365 (413)
162 2gkg_A Response regulator homo 20.1 1.2E+02 0.004 18.6 3.7 58 78-138 49-110 (127)
163 2r6f_A Excinuclease ABC subuni 20.0 4.2E+02 0.014 24.3 8.3 42 80-123 526-570 (972)
No 1
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=2.4e-44 Score=291.13 Aligned_cols=169 Identities=28% Similarity=0.417 Sum_probs=153.5
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------CCC---C------CCCCHHHHHHHHHHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------GKY---S------YCGDPAYLRAACEASL 71 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------~k~---~------~~~~~~~i~~~~~~sL 71 (183)
.+++++.++|+.|+++|||+||||+.||.|.||+.+|++|+.. +|. . .+.+++.+++++++||
T Consensus 32 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~~i~TK~g~~~~~~~~~~~~~~~~i~~~~~~SL 111 (312)
T 1pyf_A 32 LNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESL 111 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGCEEEEEECEEEETTEEEECCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeEEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 5889999999999999999999999999999999999999751 342 1 3678999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCCcHH---H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKE---E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~---~ 148 (183)
++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++++..+|+++|++||+++++.+. .
T Consensus 112 ~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~ 191 (312)
T 1pyf_A 112 KRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVLQGEYNLLNREAEKTFFP 191 (312)
T ss_dssp HHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHH
T ss_pred HHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCCHHHHHHHHhhCCceEEeccCCccccchHHHHHH
Confidence 9999999999999999988899999999999999999999999999999999999998999999999999988753 3
Q ss_pred H--hcCCeEEEeccCCccccCCCCCCCCCCC
Q 044886 149 M--ELGIGIVAYNLLECEFLSSGPKLIHLFA 177 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l~~~~~~~~~~~ 177 (183)
+ ++||++++|+||++|+|++++.....++
T Consensus 192 ~~~~~gi~v~a~spL~~G~L~~~~~~~~~~~ 222 (312)
T 1pyf_A 192 YTKEHNISFIPYFPLVSGLLAGKYTEDTTFP 222 (312)
T ss_dssp HHHHHTCEEEEESTTTTTGGGTCCCTTCCCC
T ss_pred HHHHcCCeEEEecccccccccCCCCCCCCCC
Confidence 3 9999999999999999999886544443
No 2
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=9.7e-44 Score=290.02 Aligned_cols=168 Identities=30% Similarity=0.419 Sum_probs=152.6
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC---------CCCC---C------CCCHHHHHHH
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED---------GKYS---Y------CGDPAYLRAA 66 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~---------~k~~---~------~~~~~~i~~~ 66 (183)
||. .+++++.++|+.|+++|||+||||+.||.|.||+.+|++|++. +|.. + +.+++.++++
T Consensus 28 ~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~i~~~ 106 (333)
T 1pz1_A 28 WGG-TDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQVILATKTALDWKNNQLFRHANRARIVEE 106 (333)
T ss_dssp TTC-CCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGCEEEEEECEEESSSCEEECCCHHHHHHH
T ss_pred CCC-CCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeEEEEEeeCccCCCCCCCCCCCHHHHHHH
Confidence 553 6889999999999999999999999999999999999999751 3432 2 4689999999
Q ss_pred HHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCCcH
Q 044886 67 CEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRDVK 146 (183)
Q Consensus 67 ~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 146 (183)
+++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++++..+|+++|++||+++++.+
T Consensus 107 ~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e 186 (333)
T 1pz1_A 107 VENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVAPLHTIQPPYNLFEREME 186 (333)
T ss_dssp HHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCCHHHHHHHHTTSCCCEECCBCBTTBCGGG
T ss_pred HHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCCHHHHHHHHhcCCcEEEeccccCccCchH
Confidence 99999999999999999999998889999999999999999999999999999999999999999999999999998854
Q ss_pred H---HH--hcCCeEEEeccCCccccCCCCCCC
Q 044886 147 E---EM--ELGIGIVAYNLLECEFLSSGPKLI 173 (183)
Q Consensus 147 ~---~~--~~~i~v~a~~~l~~G~l~~~~~~~ 173 (183)
. .+ ++||++++|+||++|+|++++...
T Consensus 187 ~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~ 218 (333)
T 1pz1_A 187 ESVLPYAKDNKITTLLYGSLCRGLLTGKMTEE 218 (333)
T ss_dssp GTHHHHHHHTTCEEEEBCTTGGGTTSSCCCTT
T ss_pred HHHHHHHHHcCceEEEeecccCCccCCCcccc
Confidence 3 33 999999999999999999987543
No 3
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=8.9e-44 Score=291.79 Aligned_cols=173 Identities=27% Similarity=0.429 Sum_probs=155.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-------CCCC--------------CCCCHHHH
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-------GKYS--------------YCGDPAYL 63 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-------~k~~--------------~~~~~~~i 63 (183)
||. .+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|+.. +|.. .+.+++.+
T Consensus 46 ~g~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i 124 (348)
T 3n2t_A 46 WGG-PDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAEKPNKAHVATKLGLHWVGEDEKNMKVFRDSRPARI 124 (348)
T ss_dssp SCS-TTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHSCCCCEEEEEECEEEESSSTTTCEEEECCCHHHH
T ss_pred CCC-CCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhhCCCeEEEEEeecCCCcCCCcccccccCCCCHHHH
Confidence 444 6899999999999999999999999999999999999999742 2321 13689999
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccC
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSR 143 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 143 (183)
++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||+|||++++++++++..+|+++|++||++++
T Consensus 125 ~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~ 204 (348)
T 3n2t_A 125 RKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIRALGVSNFSPEQMDIFREVAPLATIQPPLNLFER 204 (348)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHSCCCEEECBCBTTBC
T ss_pred HHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcceEEecCCCCHHHHHHHHHhCCccEEEeeecCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcHH---HH--hcCCeEEEeccCCccccCCCCCCCCCCCC
Q 044886 144 DVKE---EM--ELGIGIVAYNLLECEFLSSGPKLIHLFAT 178 (183)
Q Consensus 144 ~~~~---~~--~~~i~v~a~~~l~~G~l~~~~~~~~~~~~ 178 (183)
+.+. ++ ++||++++|+||++|+|++++.....++.
T Consensus 205 ~~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~~~~~~~ 244 (348)
T 3n2t_A 205 TIEKDILPYAEKHNAVVLAYGALCRGLLTGKMNRDTTFPK 244 (348)
T ss_dssp GGGGTHHHHHHHHTCEEEEBCTTGGGGGGTCCCTTCCCCT
T ss_pred chHHHHHHHHHHcCCeEEEeecccCccccCCccCCCCCCC
Confidence 7644 33 99999999999999999999876544443
No 4
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=5.7e-44 Score=291.80 Aligned_cols=167 Identities=50% Similarity=0.814 Sum_probs=147.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCC-CchHHHHHHHHhhC--------CCCC----------CCCCHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGP-HTNEILLGKVIYED--------GKYS----------YCGDPAYL 63 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~sE~~~g~~l~~~--------~k~~----------~~~~~~~i 63 (183)
+.||.+.+.+++.++|++|+++|||+||||+.||. |.||+.+|++|++. +|.. .+.+++.+
T Consensus 25 ~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~i 104 (337)
T 3v0s_A 25 GDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQVGTKFGIHEIGFSGVKAXGTPDYV 104 (337)
T ss_dssp -------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCEEEEEECEEEEETTEEEECCCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceEEEeeeccccCCCCcccCCCCHHHH
Confidence 34676678999999999999999999999999996 68999999999752 2322 25689999
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccC
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSR 143 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 143 (183)
++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++++..+++++|++||++++
T Consensus 105 ~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~~~~~~ 184 (337)
T 3v0s_A 105 RSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASPDTIRRAHAVHPVTALQIEYSLWTR 184 (337)
T ss_dssp HHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHSCCCEEEEECBTTBC
T ss_pred HHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCHHHHHHHhccCCceEEEeecccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcHH---HH--hcCCeEEEeccCCccccCCC
Q 044886 144 DVKE---EM--ELGIGIVAYNLLECEFLSSG 169 (183)
Q Consensus 144 ~~~~---~~--~~~i~v~a~~~l~~G~l~~~ 169 (183)
+.+. ++ ++||++++|+||++|+|+++
T Consensus 185 ~~e~~l~~~~~~~gi~v~a~spL~~G~L~g~ 215 (337)
T 3v0s_A 185 DIEDEIVPLCRQLGIGIVPYSPIGRGLFWGK 215 (337)
T ss_dssp GGGTTHHHHHHHHTCEEEEESTTHHHHHHHH
T ss_pred chhHHHHHHHHHcCceEEEeccccCcccCCC
Confidence 7643 33 99999999999999999876
No 5
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=5.5e-43 Score=284.80 Aligned_cols=169 Identities=24% Similarity=0.372 Sum_probs=151.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCC--------CCCCHHHHHH
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYS--------YCGDPAYLRA 65 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~--------~~~~~~~i~~ 65 (183)
.||.+++.+++.++|++|+++|||+||||+.||+|.||+.+|++|++. +|.. .+.+++.+++
T Consensus 25 ~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~ 104 (327)
T 3eau_A 25 TFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIE 104 (327)
T ss_dssp CCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCCSSGGGBSSSHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCeEEEEEeecCCCCCCCCCCCCHHHHHH
Confidence 456668999999999999999999999999999999999999999852 2421 2358899999
Q ss_pred HHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc------CCeeEEeeecC
Q 044886 66 ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI------HPITVVRLEWS 139 (183)
Q Consensus 66 ~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~------~~~~~~q~~~~ 139 (183)
++++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++... .+|+++|++||
T Consensus 105 ~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~ 184 (327)
T 3eau_A 105 GLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYH 184 (327)
T ss_dssp HHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHTTCCCCCEEEEECB
T ss_pred HHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCCCHHHHHHHHHHHHHcCCCCceeeccccc
Confidence 999999999999999999999999999999999999999999999999999999999888754 58999999999
Q ss_pred cccCCcHH-H---H--hcCCeEEEeccCCccccCCCCCC
Q 044886 140 LRSRDVKE-E---M--ELGIGIVAYNLLECEFLSSGPKL 172 (183)
Q Consensus 140 ~~~~~~~~-~---~--~~~i~v~a~~~l~~G~l~~~~~~ 172 (183)
+++++... + + ++||++++|+||++|+|++++..
T Consensus 185 ~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~ 223 (327)
T 3eau_A 185 MFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 223 (327)
T ss_dssp TTBCHHHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred ccccchhHhhHHHHHHHcCCeEEEeccccCceecCcccC
Confidence 99887533 3 3 89999999999999999999864
No 6
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=2.6e-42 Score=283.60 Aligned_cols=169 Identities=30% Similarity=0.448 Sum_probs=150.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCC--CchHHHHHHHHhh-----C------CCCC---------CCCCHH
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYGP--HTNEILLGKVIYE-----D------GKYS---------YCGDPA 61 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~sE~~~g~~l~~-----~------~k~~---------~~~~~~ 61 (183)
.||...+.+++.++|+.|+++|||+||||+.||+ |.||+.+|++|++ . +|.. ...+++
T Consensus 56 ~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~v~I~TK~g~~~~~~~~~~~~s~~ 135 (353)
T 3erp_A 56 NFGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFLPWRDELIISTKAGYTMWDGPYGDWGSRK 135 (353)
T ss_dssp SCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTGGGGGGCEEEEEESSCCSSSTTSSTTCHH
T ss_pred hcCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhccCCCCeEEEEeeeccCCCCCcccCCCCHH
Confidence 4566678999999999999999999999999998 8999999999973 1 2321 123789
Q ss_pred HHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc-----CCeeEEee
Q 044886 62 YLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI-----HPITVVRL 136 (183)
Q Consensus 62 ~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~-----~~~~~~q~ 136 (183)
.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++++. .+|+++|+
T Consensus 136 ~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~ 215 (353)
T 3erp_A 136 YLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGTPCLIHQP 215 (353)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred HHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHHHHHcCCCeEEeec
Confidence 9999999999999999999999999999999999999999999999999999999999999988764 68999999
Q ss_pred ecCcccCCcHH---HH--hcCCeEEEeccCCccccCCCCCC
Q 044886 137 EWSLRSRDVKE---EM--ELGIGIVAYNLLECEFLSSGPKL 172 (183)
Q Consensus 137 ~~~~~~~~~~~---~~--~~~i~v~a~~~l~~G~l~~~~~~ 172 (183)
+||++++..+. ++ ++||++++|+||++|+|++++..
T Consensus 216 ~~~~~~~~~e~~ll~~~~~~gI~v~a~spL~~G~Ltg~~~~ 256 (353)
T 3erp_A 216 KYSLFERWVEDGLLALLQEKGVGSIAFSPLAGGQLTDRYLN 256 (353)
T ss_dssp BCBTTBCGGGGTHHHHHHHHTCEEEEBSTTGGGTSSGGGTC
T ss_pred cccccccchhhHHHHHHHHcCCeEEEeccccccccCCCccC
Confidence 99999987544 33 99999999999999999998753
No 7
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=9.6e-43 Score=283.42 Aligned_cols=167 Identities=27% Similarity=0.298 Sum_probs=149.1
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCCC----CCCHHHHHHHHHHH
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYSY----CGDPAYLRAACEAS 70 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~~----~~~~~~i~~~~~~s 70 (183)
||...+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|++. +|..+ +.+++.+++++++|
T Consensus 15 ~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~~~~~~~~~i~~~~~~S 94 (327)
T 1gve_A 15 MGRRMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMFGKTLKPADVRFQLETS 94 (327)
T ss_dssp BTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCTTCCSSHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCCCCCCCHHHHHHHHHHH
Confidence 45445889999999999999999999999999889999999999631 23222 56899999999999
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc------CCeeEEeeecCcccCC
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI------HPITVVRLEWSLRSRD 144 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~ 144 (183)
|++||+||||+|++|||+...+++++|++|++|+++||||+||+|||+.++++++++. .+|+++|++||+++++
T Consensus 95 L~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~~~~~~~~ 174 (327)
T 1gve_A 95 LKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLCKKNGWIMPTVYQGMYNAITRQ 174 (327)
T ss_dssp HHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCG
T ss_pred HHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHcCCCCeEEEeccCcceecc
Confidence 9999999999999999998889999999999999999999999999999999888654 5799999999999987
Q ss_pred cHH---HH--hcCCeEEEeccCCccccCCCCC
Q 044886 145 VKE---EM--ELGIGIVAYNLLECEFLSSGPK 171 (183)
Q Consensus 145 ~~~---~~--~~~i~v~a~~~l~~G~l~~~~~ 171 (183)
.+. ++ ++||++++|+||++|+|++++.
T Consensus 175 ~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~ 206 (327)
T 1gve_A 175 VETELFPCLRHFGLRFYAFNPLAGGLLTGRYK 206 (327)
T ss_dssp GGTTHHHHHHHHTCEEEEECTTGGGGGGTCCC
T ss_pred cHHHHHHHHHHcCCeEEEecccccccccCccc
Confidence 543 33 9999999999999999999875
No 8
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=3e-42 Score=282.49 Aligned_cols=168 Identities=26% Similarity=0.438 Sum_probs=149.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCC--CchHHHHHHHHhhC-----------CCCC---------CCCCHH
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYGP--HTNEILLGKVIYED-----------GKYS---------YCGDPA 61 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~sE~~~g~~l~~~-----------~k~~---------~~~~~~ 61 (183)
.||...+.+++.++|+.|+++|||+||||+.||+ |.||+.+|++|++. +|.. ...+++
T Consensus 35 ~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~~~R~~~~I~TK~g~~~~~~~~~~~~s~~ 114 (346)
T 3n6q_A 35 NFGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRK 114 (346)
T ss_dssp SCSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHCTTTGGGCEEEEEECSCCSSSTTSSSSCHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHHHHhhcccccccEEEEEEecccCCCCCCCCCCCHH
Confidence 4566678899999999999999999999999997 89999999999741 2311 123889
Q ss_pred HHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc-----CCeeEEee
Q 044886 62 YLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI-----HPITVVRL 136 (183)
Q Consensus 62 ~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~-----~~~~~~q~ 136 (183)
.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++++++++.+. .+++++|+
T Consensus 115 ~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~ 194 (346)
T 3n6q_A 115 YLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKIPLLIHQP 194 (346)
T ss_dssp HHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEEC
T ss_pred HHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEec
Confidence 9999999999999999999999999999999999999999999999999999999999999887654 67899999
Q ss_pred ecCcccCCcHH-HH-----hcCCeEEEeccCCccccCCCCC
Q 044886 137 EWSLRSRDVKE-EM-----ELGIGIVAYNLLECEFLSSGPK 171 (183)
Q Consensus 137 ~~~~~~~~~~~-~~-----~~~i~v~a~~~l~~G~l~~~~~ 171 (183)
+||++++..+. ++ ++||++++|+||++|+|++++.
T Consensus 195 ~~~l~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~ 235 (346)
T 3n6q_A 195 SYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKYL 235 (346)
T ss_dssp BCBTTBCHHHHTTHHHHHHHHTCEEEEBSTTGGGGGGTSCC
T ss_pred cCchhhcCcchhhHHHHHHHcCCeEEEeccccCeecCCCcc
Confidence 99999987643 33 9999999999999999999874
No 9
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-42 Score=285.83 Aligned_cols=169 Identities=24% Similarity=0.372 Sum_probs=151.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCC--------CCCCHHHHHH
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYS--------YCGDPAYLRA 65 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~--------~~~~~~~i~~ 65 (183)
.||..++.+++.++|+.|+++|||+||||+.||+|.||+.+|++|++. +|.. .+.+++.+++
T Consensus 59 ~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~s~~~i~~ 138 (367)
T 3lut_A 59 TFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIE 138 (367)
T ss_dssp CCCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGGCEEEEEESBCCSSGGGBSSCHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCceEEEEeccccCCCCccCCCCCHHHHHH
Confidence 456678999999999999999999999999999999999999999752 2421 2357899999
Q ss_pred HHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc------CCeeEEeeecC
Q 044886 66 ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI------HPITVVRLEWS 139 (183)
Q Consensus 66 ~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~------~~~~~~q~~~~ 139 (183)
++++||++||+||||+|++|||++..+++++|++|++|+++||||+||+|||++.++++++.. .+|+++|++||
T Consensus 139 ~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~ 218 (367)
T 3lut_A 139 GLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYH 218 (367)
T ss_dssp HHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECB
T ss_pred HHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHHHHHcCCCCceeeecccc
Confidence 999999999999999999999999999999999999999999999999999999999888654 68999999999
Q ss_pred cccCCcHH-H---H--hcCCeEEEeccCCccccCCCCCC
Q 044886 140 LRSRDVKE-E---M--ELGIGIVAYNLLECEFLSSGPKL 172 (183)
Q Consensus 140 ~~~~~~~~-~---~--~~~i~v~a~~~l~~G~l~~~~~~ 172 (183)
+++++... + + ++||++++|+||++|+|++++..
T Consensus 219 ~~~~~~~e~~l~~~~~~~gi~v~a~spL~~G~Ltgk~~~ 257 (367)
T 3lut_A 219 MFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257 (367)
T ss_dssp TTBCHHHHTHHHHHHHHHCCEEEEECTTGGGGGGTTTTT
T ss_pred ceecchhHhHHHHHHHHcCCeEEEecccccccccCCcCC
Confidence 99987622 3 3 89999999999999999999864
No 10
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=4.1e-42 Score=278.68 Aligned_cols=167 Identities=28% Similarity=0.417 Sum_probs=148.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-------CCCC-----------CCCCHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-------GKYS-----------YCGDPAYLR 64 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-------~k~~-----------~~~~~~~i~ 64 (183)
|+|.-..+.+++.++|+.|+++|||+||||+.||.|.||..+|++|+.. +|.. .+.+++.++
T Consensus 39 Gt~~~g~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~v~ 118 (317)
T 1ynp_A 39 GCMSLGTDETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKGRRQDIILATKVGNRFEQGKEGWWWDPSKAYIK 118 (317)
T ss_dssp CSCCCCSCHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTTCGGGCEEEEEC---------------CHHHHH
T ss_pred cCcccCCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCeEEEEeeeCCCcCCCCccccCCCCHHHHH
Confidence 5554334568999999999999999999999999999999999999742 3321 256899999
Q ss_pred HHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC
Q 044886 65 AACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD 144 (183)
Q Consensus 65 ~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~ 144 (183)
+++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||++++++++++..+|+++|++||+++++
T Consensus 119 ~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~ 198 (317)
T 1ynp_A 119 EAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRSNIVSIMMQYSILDRR 198 (317)
T ss_dssp HHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEECCCHHHHHHHHHHSCCCEEEEECBTTBCG
T ss_pred HHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHhcCCCEEEeccCCchhCC
Confidence 99999999999999999999999988889999999999999999999999999999999999998899999999999988
Q ss_pred cHH--HH--hcCCeEEEeccCCccccCCC
Q 044886 145 VKE--EM--ELGIGIVAYNLLECEFLSSG 169 (183)
Q Consensus 145 ~~~--~~--~~~i~v~a~~~l~~G~l~~~ 169 (183)
.+. ++ ++||++++|+||++|.|+++
T Consensus 199 ~e~l~~~~~~~gI~v~a~spL~~G~L~~~ 227 (317)
T 1ynp_A 199 PEEWFPLIQEHGVSVVVRGPVARGLLSRR 227 (317)
T ss_dssp GGGGHHHHHHTTCEEEEECTTGGGTTSSS
T ss_pred HHHHHHHHHHcCCeEEEecCccCcccCCC
Confidence 753 44 99999999999999999987
No 11
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=284.70 Aligned_cols=168 Identities=27% Similarity=0.321 Sum_probs=149.7
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCCC----CCCHHHHHHHHHHH
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYSY----CGDPAYLRAACEAS 70 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~~----~~~~~~i~~~~~~s 70 (183)
||...+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|++. +|..+ +.+++.+++++++|
T Consensus 48 ~g~~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK~~~~~~~~~~~~~i~~~~e~S 127 (360)
T 2bp1_A 48 MGRRMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATKANPWDGKSLKPDSVRSQLETS 127 (360)
T ss_dssp BTTTBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEEECCCTTCCSSHHHHHHHHHHH
T ss_pred hCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEeeecCCCCCCCCHHHHHHHHHHH
Confidence 45555889999999999999999999999999889999999999621 23222 57899999999999
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc------CCeeEEeeecCcccCC
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI------HPITVVRLEWSLRSRD 144 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~ 144 (183)
|++||+||||+|++|||+...+++++|++|++|+++||||+||+|||+.++++++++. .+|+++|++||+++++
T Consensus 128 L~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~g~~~~~~~Q~~yn~~~~~ 207 (360)
T 2bp1_A 128 LKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVAEICTLCKSNGWILPTVYQGMYNATTRQ 207 (360)
T ss_dssp HHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCEEEEEEECBTTBCG
T ss_pred HHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHHHHHHHHHHcCCCCceEEeeccchhhcc
Confidence 9999999999999999998889999999999999999999999999999999888764 5799999999999987
Q ss_pred cHH---HH--hcCCeEEEeccCCccccCCCCCC
Q 044886 145 VKE---EM--ELGIGIVAYNLLECEFLSSGPKL 172 (183)
Q Consensus 145 ~~~---~~--~~~i~v~a~~~l~~G~l~~~~~~ 172 (183)
.+. ++ ++||++++|+||++|+|++++..
T Consensus 208 ~e~~l~~~~~~~gi~v~a~spL~~G~Ltg~~~~ 240 (360)
T 2bp1_A 208 VETELFPCLRHFGLRFYAYNPLAGGLLTGKYKY 240 (360)
T ss_dssp GGTTHHHHHHHHTCEEEEECTTGGGGGGTCCCG
T ss_pred chhhHHHHHHHcCCeEEEecccccCcccCCccC
Confidence 543 33 99999999999999999998753
No 12
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=4.6e-41 Score=275.23 Aligned_cols=169 Identities=27% Similarity=0.365 Sum_probs=146.3
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCC-------CCchHHHHHHHHhhC---------CCCCC-----------
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYG-------PHTNEILLGKVIYED---------GKYSY----------- 56 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~sE~~~g~~l~~~---------~k~~~----------- 56 (183)
.||...+.+++.++|+.|+++|||+||||+.|| .|.||+.+|++|++. +|...
T Consensus 22 ~~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~~~R~~~~i~TK~~~~~~~~~~~~~~ 101 (346)
T 1lqa_A 22 TFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRP 101 (346)
T ss_dssp TBTTTBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHHCCGGGCEEEEEECCSCCTTCCCSST
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhcCCCceEEEEEeECCCcCCcccccCC
Confidence 367656889999999999999999999999996 689999999999742 23211
Q ss_pred --CCCHHHHHHHHHHHHHHcCCCCcceEEeccC---------------CC--CCCHHHHHHHHHHHHHcCCccEEEecCc
Q 044886 57 --CGDPAYLRAACEASLKRLDVDCIDLYDQHRI---------------DT--KVPIEVTIGELKRLVEEGKIKHIDLSEA 117 (183)
Q Consensus 57 --~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~---------------~~--~~~~~~~~~~l~~l~~~G~ir~iG~s~~ 117 (183)
+.+++.+++++++||++||+||||+|++||| |+ ..++.++|++|++|+++||||+||+|||
T Consensus 102 ~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 181 (346)
T 1lqa_A 102 DQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNE 181 (346)
T ss_dssp TCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred CCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCCHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 2689999999999999999999999999999 33 4578999999999999999999999999
Q ss_pred CHHHHHHHhhc------CCeeEEeeecCcccCCcHHHH-----hcCCeEEEeccCCccccCCCCCC
Q 044886 118 FASTIRRAHTI------HPITVVRLEWSLRSRDVKEEM-----ELGIGIVAYNLLECEFLSSGPKL 172 (183)
Q Consensus 118 ~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~~-----~~~i~v~a~~~l~~G~l~~~~~~ 172 (183)
++.++++++.. .+|+++|++||++++..+.++ ++||++++|+||++|+|++++..
T Consensus 182 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a~spL~~G~L~g~~~~ 247 (346)
T 1lqa_A 182 TAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYLN 247 (346)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEEECTTGGGGGGTTTGG
T ss_pred CHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEEecchhhhhhcCcccc
Confidence 99888776542 569999999999998854433 99999999999999999998743
No 13
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=8e-41 Score=271.33 Aligned_cols=160 Identities=21% Similarity=0.314 Sum_probs=144.5
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCC-------------CCCCHHHHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYS-------------YCGDPAYLRA 65 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~-------------~~~~~~~i~~ 65 (183)
.+.+++.++|+.|+++|||+||||+.||.|.||+.+|++|++. +|.. .+.+++.+++
T Consensus 50 ~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~ 129 (319)
T 1ur3_M 50 MSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITDRDHIIK 129 (319)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTCEEEEEECEECTTSTTCSSCEECCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeEEEEEeeccCCCCCcccccccCCCCHHHHHH
Confidence 4789999999999999999999999999999999999999742 2321 1478999999
Q ss_pred HHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccC
Q 044886 66 ACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSR 143 (183)
Q Consensus 66 ~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~ 143 (183)
++++||++||+||||+|++|||++..+.+++|++|++|+++||||+||+|||++++++++.+. .+|+++|++||++++
T Consensus 130 ~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~ 209 (319)
T 1ur3_M 130 SAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNFTPAQFALLQSRLPFTLATNQVEISPVHQ 209 (319)
T ss_dssp HHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEESCCHHHHHHHHTTCSSCCCCEEEECBTTBC
T ss_pred HHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEecCCCHHHHHHHHHhcCCCcEEEEccCchhhC
Confidence 999999999999999999999998888999999999999999999999999999999999876 379999999999998
Q ss_pred CcH-H---HH--hcCCeEEEeccCCccccCC
Q 044886 144 DVK-E---EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 144 ~~~-~---~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
+.. . ++ ++||++++|+||++|.|..
T Consensus 210 ~~~~~~ll~~~~~~gi~v~a~spL~~G~L~~ 240 (319)
T 1ur3_M 210 PLLLDGTLDQLQQLRVRPMAWSCLGGGRLFN 240 (319)
T ss_dssp GGGTSSHHHHHHHHTCCCEEECCCTTTCSSS
T ss_pred chhhHHHHHHHHHcCCeEEEeccccCccccC
Confidence 863 2 33 9999999999999999854
No 14
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=2.1e-40 Score=265.83 Aligned_cols=161 Identities=27% Similarity=0.253 Sum_probs=136.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-------CCCC---------CCCCHHHHHHHH
Q 044886 4 FYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-------GKYS---------YCGDPAYLRAAC 67 (183)
Q Consensus 4 ~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-------~k~~---------~~~~~~~i~~~~ 67 (183)
.||. .+.+++.++|+.|+++|||+||||+.|| .+|+.+|++|+.. +|.. .+.+++.+++++
T Consensus 63 ~~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~al~~~R~~v~I~TK~~~~~~~~~~~~~~~~~~i~~~~ 139 (292)
T 4exb_A 63 GFTI-PDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPLLRGQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSV 139 (292)
T ss_dssp --CC-CCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHHHTTTGGGCEEEEEESBC--CCSCCBCCCHHHHHHHH
T ss_pred ccCC-CCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHHhccCCCcEEEEEeeccccCCCCccCCCCHHHHHHHH
Confidence 3444 6889999999999999999999999998 8999999999742 2322 357899999999
Q ss_pred HHHHHHcCCCCcceEEeccC--CCCCCHH-HHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC
Q 044886 68 EASLKRLDVDCIDLYDQHRI--DTKVPIE-VTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD 144 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~ 144 (183)
++||++||+||||+|++||| +...+.. ++|++|++|+++||||+||+|||++++++++++. |+++|++||+++++
T Consensus 140 e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~ 217 (292)
T 4exb_A 140 ERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERA 217 (292)
T ss_dssp HHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHTTSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCT
T ss_pred HHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHCCCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCC
Confidence 99999999999999999999 5444455 8999999999999999999999999999999988 89999999999998
Q ss_pred c-HH-HH--hcCCeEEEeccCCccccCCC
Q 044886 145 V-KE-EM--ELGIGIVAYNLLECEFLSSG 169 (183)
Q Consensus 145 ~-~~-~~--~~~i~v~a~~~l~~G~l~~~ 169 (183)
. .. ++ ++||++++|+||++|.|+++
T Consensus 218 ~~~l~~~~~~~gi~v~a~spL~~G~L~~~ 246 (292)
T 4exb_A 218 ERPVIEYAAAHAKGILVKKALASGHACLG 246 (292)
T ss_dssp THHHHHHHHHTTCEEEEECCSCC------
T ss_pred HHHHHHHHHHCCcEEEEeccccCCccCCC
Confidence 7 22 44 99999999999999999865
No 15
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=3.8e-39 Score=257.48 Aligned_cols=161 Identities=22% Similarity=0.236 Sum_probs=141.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCC-CCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKY-SYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~-~~~~~~~~i~~~~~~sL 71 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ....+++.+++++++||
T Consensus 43 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~~~~~~~i~~~~e~SL 117 (283)
T 3o0k_A 43 GVWQ--ISNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIARADIFLTTKLWNSDQGYESTLKAFDTSL 117 (283)
T ss_dssp ECCS--CCHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECcc--CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCCcccEEEEEccCCCCCCHHHHHHHHHHHH
Confidence 4554 4789999999999999999999999999 699999999853 232 33578999999999999
Q ss_pred HHcCCCCcceEEeccCCCC-CCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-
Q 044886 72 KRLDVDCIDLYDQHRIDTK-VPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE- 147 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~- 147 (183)
++||+||||+|++|||++. .+..++|++|++|+++||||+||+|||++++++++++. .+|.++|++||++.++...
T Consensus 118 ~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~ 197 (283)
T 3o0k_A 118 KKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIGVSNFRTADLERLIKESGVTPVLNQIELHPQFQQDELR 197 (283)
T ss_dssp HHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHH
T ss_pred HHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEEeccCcHHHHHHHHHhCCCCeEEEEeecCcccCcHHHH
Confidence 9999999999999999876 46789999999999999999999999999999999876 5679999999999987544
Q ss_pred HH--hcCCeEEEeccCCccccCC
Q 044886 148 EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 148 ~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
++ ++||++++|+||++|.|..
T Consensus 198 ~~~~~~gi~v~a~spL~~G~l~~ 220 (283)
T 3o0k_A 198 LFHGKHDIATEAWSPLGQGKLLE 220 (283)
T ss_dssp HHHHHTTCEEEEESTTCCC-CTT
T ss_pred HHHHHCCcEEEEecCCCCCcccc
Confidence 55 9999999999999998764
No 16
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-39 Score=258.66 Aligned_cols=161 Identities=23% Similarity=0.390 Sum_probs=144.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCC-CCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKY-SYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~-~~~~~~~~i~~~~~~sL 71 (183)
|+|. ++.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ..+.+++.+++++++||
T Consensus 40 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~i~~~~e~SL 114 (298)
T 3up8_A 40 GTFR--MSGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRADVFLTTKVWVDNYRHDAFIASVDESL 114 (298)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECCc--CCHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHHEEEEeccCCCCCCHHHHHHHHHHHH
Confidence 4554 4688999999999999999999999999 899999999852 232 34779999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
++||+||||+|++|||++..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||++.++... +
T Consensus 115 ~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~ 194 (298)
T 3up8_A 115 RKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNFNTTQMEEAARLSDAPIATNQVEYHPYLDQTKVLQ 194 (298)
T ss_dssp HHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCEEEEEEECBTTBCCHHHHH
T ss_pred HHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhCCCCceEEEEecccccccHHHHH
Confidence 999999999999999998889999999999999999999999999999999999887 4799999999999886544 4
Q ss_pred H--hcCCeEEEeccCCccccCC
Q 044886 149 M--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l~~ 168 (183)
+ ++||++++|+||++|.|..
T Consensus 195 ~~~~~gi~v~a~spL~~G~l~~ 216 (298)
T 3up8_A 195 TARRLGMSLTSYYAMANGKVPA 216 (298)
T ss_dssp HHHHHTCEEEEECTTGGGHHHH
T ss_pred HHHHCCCEEEEECCCcCCcccc
Confidence 4 9999999999999998653
No 17
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=2.8e-39 Score=262.06 Aligned_cols=162 Identities=23% Similarity=0.338 Sum_probs=142.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh-------C-------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE-------D-------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~-------~-------~k-~~~~~~~~~i~~~~ 67 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++ . +| +....+++.+++++
T Consensus 22 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~i~TK~~~~~~~~~~i~~~~ 96 (317)
T 1qwk_A 22 GTWQ--SSPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGL 96 (317)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCGGGCEEEEEECTTTSSTTTHHHHH
T ss_pred ECCc--CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhheEEEeeeCCCcCCHHHHHHHH
Confidence 5664 5789999999999999999999999999 79999999975 1 23 22367889999999
Q ss_pred HHHHHHcCCCCcceEEeccCCC---------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEee
Q 044886 68 EASLKRLDVDCIDLYDQHRIDT---------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRL 136 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~ 136 (183)
++||++||+||||+|++|||+. ..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|+
T Consensus 97 ~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~ 176 (317)
T 1qwk_A 97 RESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALGLTPVHNSQV 176 (317)
T ss_dssp HHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHTTCSSCCCEEEE
T ss_pred HHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHcCCeeEEEecCCCHHHHHHHHHhcCCccceecc
Confidence 9999999999999999999974 347899999999999999999999999999999999876 46899999
Q ss_pred ecCcccCCcHH-HH--hcCCeEEEeccCCccccCCCC
Q 044886 137 EWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSSGP 170 (183)
Q Consensus 137 ~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~~~ 170 (183)
+||++.++... ++ ++||++++|+||++|.|+ ++
T Consensus 177 ~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G~l~-~~ 212 (317)
T 1qwk_A 177 ELHLYFPQHDHVDFCKKHNISVTSYATLGSPGRV-NF 212 (317)
T ss_dssp ECBTTBCCHHHHHHHHHTTCEEEEESTTCSCCEE-CC
T ss_pred eeccccCcHHHHHHHHHcCCEEEEecCccCCCcc-cc
Confidence 99999887543 44 999999999999999876 44
No 18
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=5.7e-39 Score=255.69 Aligned_cols=161 Identities=25% Similarity=0.261 Sum_probs=142.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CC-CCCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GK-YSYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k-~~~~~~~~~i~~~~~~sL 71 (183)
|+|.. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +| +..+.+++.+++++++||
T Consensus 23 Gt~~~-~~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~~~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL 98 (276)
T 3f7j_A 23 GVFKV-ENGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNEDQGYETTLAAFEKSL 98 (276)
T ss_dssp ECTTC-CTTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHCSCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred cCCcC-CCHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhhcCCCcccEEEEEeeCCCCCCHHHHHHHHHHHH
Confidence 56654 3568999999999999999999999999 799999999852 23 234678999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
++||+||||+|++|||++.. ..++|++|++|+++||||+||+|||++++++++++. .+|.++|++||++.++... +
T Consensus 99 ~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~ 177 (276)
T 3f7j_A 99 ERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRD 177 (276)
T ss_dssp HHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHH
T ss_pred HHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhcCCCceeeeeeeccccCCHHHHH
Confidence 99999999999999998754 889999999999999999999999999999999876 5678999999999887544 5
Q ss_pred H--hcCCeEEEeccCCccccCC
Q 044886 149 M--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l~~ 168 (183)
+ ++||++++|+||++|.|..
T Consensus 178 ~~~~~gi~v~a~spl~~G~l~~ 199 (276)
T 3f7j_A 178 YCKGQGIQLEAWSPLMQGQLLD 199 (276)
T ss_dssp HHHHHTCEEEEESTTGGGTTTT
T ss_pred HHHHCCCEEEEecCCCCCccCC
Confidence 5 9999999999999998764
No 19
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=7e-39 Score=260.60 Aligned_cols=158 Identities=22% Similarity=0.237 Sum_probs=139.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHHHHHHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAACEASLKR 73 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~~~sL~~ 73 (183)
.+.+++.++|+.|+++|||+||||+.|| +|..+|++|+. . +| +....+++.+++++++||++
T Consensus 32 ~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL~r 108 (326)
T 3buv_A 32 TPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRV 108 (326)
T ss_dssp CCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCChhHeEEEeeeCCCcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999 79999999975 1 23 23467899999999999999
Q ss_pred cCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CC--
Q 044886 74 LDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HP-- 130 (183)
Q Consensus 74 lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~-- 130 (183)
||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||+.++++++++. .+
T Consensus 109 L~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~ 188 (326)
T 3buv_A 109 LQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHK 188 (326)
T ss_dssp HTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSC
T ss_pred hCCCceeEEEEccCCccCCccccCccccccccccccccHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCC
Confidence 9999999999999963 236789999999999999999999999999999999876 34
Q ss_pred eeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCCCC
Q 044886 131 ITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSSGP 170 (183)
Q Consensus 131 ~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~~~ 170 (183)
|+++|++||++.++... ++ ++||++++|+||++|.|+ ++
T Consensus 189 p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G~l~-~~ 230 (326)
T 3buv_A 189 PVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNP-IW 230 (326)
T ss_dssp CCEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCCCCCT-TT
T ss_pred CeeeeeecccccCcHHHHHHHHHcCCEEEEeccccCCccc-cc
Confidence 78999999999877443 44 999999999999999987 44
No 20
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=3.4e-39 Score=263.24 Aligned_cols=164 Identities=25% Similarity=0.411 Sum_probs=141.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHh---hC---C----------C-CCCCCCHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIY---ED---G----------K-YSYCGDPAYLRA 65 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~---~~---~----------k-~~~~~~~~~i~~ 65 (183)
|+|. ++.+++.++|+.|+++|||+||||+.|| +|+.+|++|+ +. + | +....+++.+++
T Consensus 31 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~~g~~R~~v~I~TK~~~~~~~~~~v~~ 105 (334)
T 3krb_A 31 GTWQ--APPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDASSGIKREDVWITSKLWNYNHRPELVRE 105 (334)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTTSSCCGGGCEEEEEECGGGCSGGGHHH
T ss_pred eCCC--CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhccCCCChhhEEEEeeeCCCCCCHHHHHH
Confidence 5564 5789999999999999999999999999 8999999998 22 1 3 234678999999
Q ss_pred HHHHHHHHcCCCCcceEEeccCCC--------------C-------CCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHH
Q 044886 66 ACEASLKRLDVDCIDLYDQHRIDT--------------K-------VPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRR 124 (183)
Q Consensus 66 ~~~~sL~~lg~~~iDl~~lh~~~~--------------~-------~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~ 124 (183)
++++||++||+||||+|++|||+. . .++.++|++|++|+++||||+||+|||+++++++
T Consensus 106 ~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~ 185 (334)
T 3krb_A 106 QCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLADTWRAMEQLVEEGLVKHIGVSNYTVPLLAD 185 (334)
T ss_dssp HHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHHTSEEEEEEESCCHHHHHH
T ss_pred HHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHH
Confidence 999999999999999999999943 1 5688999999999999999999999999999999
Q ss_pred Hhhc--CCeeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCCCCC
Q 044886 125 AHTI--HPITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSSGPK 171 (183)
Q Consensus 125 ~~~~--~~~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~~~~ 171 (183)
+++. .+|+++|++||++.++... ++ ++||++++|+||++|.|++++.
T Consensus 186 ~~~~~~~~~~~~Q~~~~~~~~~~~l~~~c~~~gI~v~ayspL~~G~L~~~~~ 237 (334)
T 3krb_A 186 LLNYAKIKPLVNQIEIHPWHPNDATVKFCLDNGIGVTAYSPMGGSYADPRDP 237 (334)
T ss_dssp HHHHCSSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCCSBC-----
T ss_pred HHHhCCCceEEeeeecCcccccHHHHHHHHHcCCEEEEEecCCCCcccCCCC
Confidence 9887 4789999999999987544 45 9999999999999999998764
No 21
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=9.1e-39 Score=258.17 Aligned_cols=161 Identities=25% Similarity=0.261 Sum_probs=142.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CC-CCCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GK-YSYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k-~~~~~~~~~i~~~~~~sL 71 (183)
|+|.. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +| +..+.+++.+++++++||
T Consensus 57 Gt~~~-~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~v~I~TK~~~~~~~~~~i~~~~e~SL 132 (310)
T 3b3e_A 57 GVFKV-ENGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREELFITSKVWNEDQGYETTLAAFEKSL 132 (310)
T ss_dssp ECTTC-CTTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred eCCcC-CCHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcceEEEEEeCCCCCCCHHHHHHHHHHHH
Confidence 56654 3668999999999999999999999999 799999999853 23 234678999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
++||+||||+|++|||+... ..++|++|++|+++||||+||+|||++++++++++. .+|.++|++||++.++... +
T Consensus 133 ~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~ 211 (310)
T 3b3e_A 133 ERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLTQKELRD 211 (310)
T ss_dssp HHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCHHHHH
T ss_pred HHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCCCHHHHHHHHHhcCCCcceeeeeccCccCCHHHHH
Confidence 99999999999999998754 889999999999999999999999999999999876 5688999999999887544 4
Q ss_pred H--hcCCeEEEeccCCccccCC
Q 044886 149 M--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l~~ 168 (183)
+ ++||++++|+||++|.|.+
T Consensus 212 ~~~~~gi~v~a~spL~~G~l~~ 233 (310)
T 3b3e_A 212 YCKGQGIQLEAWSPLMQGQLLD 233 (310)
T ss_dssp HHHHHTCEEEEESTTGGGTTTT
T ss_pred HHHHcCCEEEEeccccCCCcCC
Confidence 5 9999999999999998764
No 22
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=7.2e-39 Score=255.90 Aligned_cols=160 Identities=24% Similarity=0.256 Sum_probs=140.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCC-CCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKY-SYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~-~~~~~~~~i~~~~~~sL 71 (183)
|+|+ .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ..+.+++.+++++++||
T Consensus 28 Gt~~--~~~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~R~~v~i~TK~~~~~~~~~~v~~~~~~SL 102 (283)
T 2wzm_A 28 GVGE--LSDSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIPRDEIYVTTKLATPDQGFTSSQAAARASL 102 (283)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECCC--CChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCCcccEEEEeccCCCCCCHHHHHHHHHHHH
Confidence 5665 3468899999999999999999999999 799999999852 232 34678999999999999
Q ss_pred HHcCCCCcceEEeccCCCC-CCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-
Q 044886 72 KRLDVDCIDLYDQHRIDTK-VPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE- 147 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~- 147 (183)
++||+||||+|++|||++. .+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++++...
T Consensus 103 ~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~ 182 (283)
T 2wzm_A 103 ERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALR 182 (283)
T ss_dssp HHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEECBTTBCCHHHH
T ss_pred HHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEEcCCCHHHHHHHHHhcCCCcccccccCCcccCCHHHH
Confidence 9999999999999999864 45789999999999999999999999999999999876 5679999999999987544
Q ss_pred HH--hcCCeEEEeccCCccccC
Q 044886 148 EM--ELGIGIVAYNLLECEFLS 167 (183)
Q Consensus 148 ~~--~~~i~v~a~~~l~~G~l~ 167 (183)
++ ++||++++|+||++|.+.
T Consensus 183 ~~~~~~gi~v~a~spl~~G~l~ 204 (283)
T 2wzm_A 183 EVNAGYNIVTEAYGPLGVGRLL 204 (283)
T ss_dssp HHHHHTTCEEEEECTTTTTGGG
T ss_pred HHHHHCCCEEEEecCCCCCccc
Confidence 44 999999999999999653
No 23
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=5.5e-39 Score=257.17 Aligned_cols=162 Identities=21% Similarity=0.192 Sum_probs=140.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CC-CCCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GK-YSYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k-~~~~~~~~~i~~~~~~sL 71 (183)
|+|... +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +| +....+++.+++++++||
T Consensus 27 Gt~~~~-~~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~~~I~TK~~~~~~~~~~i~~~~~~SL 102 (288)
T 4f40_A 27 GVWQSP-AGEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPREDVFITTKLWNTEQGYESTLAAFEESR 102 (288)
T ss_dssp ECTTCC-TTHHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECCcCC-CcHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhhEEEEEecCCCcCCHHHHHHHHHHHH
Confidence 456432 248899999999999999999999999 899999999852 23 234678999999999999
Q ss_pred HHcCCCCcceEEeccCCCC-------CCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCccc
Q 044886 72 KRLDVDCIDLYDQHRIDTK-------VPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRS 142 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~ 142 (183)
++||+||||+|++|||+.. .+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++
T Consensus 103 ~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~ 182 (288)
T 4f40_A 103 QKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVRAIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLN 182 (288)
T ss_dssp HHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTB
T ss_pred HHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCccEEEeccCCHHHHHHHHHhCCCCCeEEeccCcccc
Confidence 9999999999999999863 56789999999999999999999999999999999875 57899999999999
Q ss_pred CCcHH-HH--hcCCeEEEeccCCccccCC
Q 044886 143 RDVKE-EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 143 ~~~~~-~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
++... ++ ++||++++|+||++|.|++
T Consensus 183 ~~~~l~~~~~~~gi~v~a~spl~~G~l~~ 211 (288)
T 4f40_A 183 NQADLRAFCDAKQIKVEAWSPLGQGKLLS 211 (288)
T ss_dssp CCHHHHHHHHHTTCEEEEESTTC--CGGG
T ss_pred CCHHHHHHHHHCCCEEEEecCCCCCcccc
Confidence 88544 55 9999999999999998865
No 24
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=9.4e-39 Score=256.07 Aligned_cols=164 Identities=24% Similarity=0.214 Sum_probs=144.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhCC----------C-CCCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG----------K-YSYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~~----------k-~~~~~~~~~i~~~~~~sL 71 (183)
|+|+. .+.+++.++|++|+++|||+||||+.|| +|+.+|++++... | +....+++.+++++++||
T Consensus 30 Gtw~~-~d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r~~~~i~tk~~~~~~~~~~~~~~~e~SL 105 (290)
T 4gie_A 30 GVWRA-QDGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPREEVWVTTKVWNSDQGYEKTLAAFERSR 105 (290)
T ss_dssp ECTTC-CTTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCGGGSEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECCCC-CCHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcchhccccccccccCCChHHHHHHHHHHH
Confidence 68876 4678899999999999999999999999 8999999998532 2 345778999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
++||+||||+|++|||+. .+..++|++|++|+++||||+||+|||+++++.++... ..+.++|+++++...+... +
T Consensus 106 ~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~~~~l~~ 184 (290)
T 4gie_A 106 ELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVSNFEPHHLTELFKSCKIRPMVNQVELHPLFQQRTLRE 184 (290)
T ss_dssp HHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCCHHHHH
T ss_pred HHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeecCCCHHHHHHHHHhccCCCceeeEeccccchhHHHHH
Confidence 999999999999999976 56889999999999999999999999999999999877 5578889888888776544 5
Q ss_pred H--hcCCeEEEeccCCccccCCCCC
Q 044886 149 M--ELGIGIVAYNLLECEFLSSGPK 171 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l~~~~~ 171 (183)
+ ++||++++|+||++|.|++++.
T Consensus 185 ~~~~~gi~~~a~spl~~G~l~~~~~ 209 (290)
T 4gie_A 185 FCKQHNIAITAWSPLGSGEEAGILK 209 (290)
T ss_dssp HHHHTTCEEEEESTTCSSGGGCGGG
T ss_pred HHHHcCceEeeecccccccccccch
Confidence 5 9999999999999999987654
No 25
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=1.4e-38 Score=253.93 Aligned_cols=159 Identities=23% Similarity=0.212 Sum_probs=140.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCC-CCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKY-SYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~-~~~~~~~~i~~~~~~sL 71 (183)
|+|... +.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ..+.+++.+++++++||
T Consensus 26 Gt~~~~-~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL 101 (281)
T 1vbj_A 26 GMWKLQ-DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPREELFVTTKLWNSDQGYESTLSAFEKSI 101 (281)
T ss_dssp ECTTCC-TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGGGCEEEEEECGGGCSHHHHHHHHHHHH
T ss_pred ECCcCC-CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChhHEEEEeccCCCCCCHHHHHHHHHHHH
Confidence 566542 458899999999999999999999999 799999999852 232 34678999999999999
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
++||+||||+|++|||+ ..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++++... +
T Consensus 102 ~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~~ 180 (281)
T 1vbj_A 102 KKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSNFHEHHIEELLKHCKVAPMVNQIELHPLLNQKALCE 180 (281)
T ss_dssp HHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTSCSSCCSEEEEECBTTBCCHHHHH
T ss_pred HHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeCCCHHHHHHHHHhCCCCceeeeEEeccccCCHHHHH
Confidence 99999999999999998 677899999999999999999999999999999999886 5679999999999987544 4
Q ss_pred H--hcCCeEEEeccCCcccc
Q 044886 149 M--ELGIGIVAYNLLECEFL 166 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~l 166 (183)
+ ++||++++|+||++|.+
T Consensus 181 ~~~~~gi~v~a~spL~~G~~ 200 (281)
T 1vbj_A 181 YCKSKNIAVTAWSPLGQGHL 200 (281)
T ss_dssp HHHHTTCEEEEESTTGGGTT
T ss_pred HHHHcCCEEEEecCCcCCCC
Confidence 4 99999999999999954
No 26
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-38 Score=258.92 Aligned_cols=162 Identities=25% Similarity=0.298 Sum_probs=141.0
Q ss_pred CCCCC-CCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CC-CCCCCCHHHHHHH
Q 044886 3 AFYGP-SKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GK-YSYCGDPAYLRAA 66 (183)
Q Consensus 3 ~~~g~-~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k-~~~~~~~~~i~~~ 66 (183)
|+|.. ..+.+++.++|+.|+++|||+||||+.|| +|..+|++|++. +| +....+++.++++
T Consensus 23 Gt~~~~~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~~~I~TK~~~~~~~~~~v~~~ 99 (324)
T 3ln3_A 23 GTYXPXEVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGVVXREDLFVTTKLWCTCFRPELVXPA 99 (324)
T ss_dssp ECCCCTTSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHH
T ss_pred cCCcccCCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCCcccceeEEEeeeCCccCCHHHHHHH
Confidence 45542 26789999999999999999999999999 799999999851 23 2346789999999
Q ss_pred HHHHHHHcCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhh
Q 044886 67 CEASLKRLDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHT 127 (183)
Q Consensus 67 ~~~sL~~lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~ 127 (183)
+++||++||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||++++++++++
T Consensus 100 ~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~ 179 (324)
T 3ln3_A 100 LEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDFCDTWERLEECXDAGLVXSIGVSNFNHRQLERILN 179 (324)
T ss_dssp HHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHT
T ss_pred HHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCHHHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHH
Confidence 99999999999999999999975 34688999999999999999999999999999999987
Q ss_pred c--CC--eeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccC
Q 044886 128 I--HP--ITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLS 167 (183)
Q Consensus 128 ~--~~--~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~ 167 (183)
. .+ |.++|++||++.++... ++ ++||++++|+||++|.+.
T Consensus 180 ~~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~g~~~ 226 (324)
T 3ln3_A 180 XPGLXYXPVCNQVECHLYLNQRXLLDYCESXDIVLVAYGALGTQRYX 226 (324)
T ss_dssp CTTCCCCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSCCCCT
T ss_pred hcCccCCceeeEeeeCcccchHHHHHHHHHcCCEEEEecCCCCCCcc
Confidence 6 23 78999999999876443 44 999999999999999864
No 27
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=1.3e-38 Score=258.04 Aligned_cols=159 Identities=25% Similarity=0.318 Sum_probs=140.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~ 67 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|..+|++|++ . +| +....+++.+++++
T Consensus 19 Gt~~--~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~~~~~~~v~~~~ 93 (316)
T 1us0_A 19 GTWK--SPPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKREELFIVSKLWCTYHEKGLVKGAC 93 (316)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCGGGCEEEEEECGGGCSHHHHHHHH
T ss_pred ECCc--CCHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCChhHeEEEEeeCCCcCCHHHHHHHH
Confidence 5664 5789999999999999999999999999 79999999985 1 23 23467899999999
Q ss_pred HHHHHHcCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc
Q 044886 68 EASLKRLDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI 128 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~ 128 (183)
++||++||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||++++++++++.
T Consensus 94 ~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~ 173 (316)
T 1us0_A 94 QKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNK 173 (316)
T ss_dssp HHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTC
T ss_pred HHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHHHHHHHHHHHCCCccEEEEecCCHHHHHHHHHh
Confidence 9999999999999999999963 236789999999999999999999999999999999886
Q ss_pred --C--CeeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCcccc
Q 044886 129 --H--PITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFL 166 (183)
Q Consensus 129 --~--~~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l 166 (183)
. +|+++|++||++.++... ++ ++||++++|+||++|.+
T Consensus 174 ~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G~l 218 (316)
T 1us0_A 174 PGLKYKPAVNQIECHPYLTQEKLIQYCQSKGIVVTAYSPLGSPDR 218 (316)
T ss_dssp TTCCSCCSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCCTTC
T ss_pred CcccCCceeeehhcCCccCCHHHHHHHHHcCCEEEEecccccCcc
Confidence 3 679999999999877543 45 99999999999999987
No 28
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=1.2e-38 Score=258.88 Aligned_cols=157 Identities=25% Similarity=0.278 Sum_probs=139.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHHHHHHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAACEASLKR 73 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~~~sL~~ 73 (183)
.+.+++.++|+.|+++|||+||||+.|| +|..+|++|+. . +| +....+++.+++++++||++
T Consensus 29 ~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~I~TK~~~~~~~~~~v~~~~~~SL~r 105 (323)
T 1afs_A 29 VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGTVKREDIFYTSKLWSTFHRPELVRTCLEKTLKS 105 (323)
T ss_dssp SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCCCChHHeEEEEecCCCcCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999 79999999975 1 23 22367889999999999999
Q ss_pred cCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--C--C
Q 044886 74 LDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--H--P 130 (183)
Q Consensus 74 lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~--~ 130 (183)
||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||++++++++++. . +
T Consensus 106 Lg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~ 185 (323)
T 1afs_A 106 TQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYK 185 (323)
T ss_dssp HCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSC
T ss_pred hCCCceeEEEecCcCcCCCCcccCcccccccccccCCCHHHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCC
Confidence 9999999999999942 236789999999999999999999999999999999886 3 6
Q ss_pred eeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCC
Q 044886 131 ITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 131 ~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
|+++|++||++.++... ++ ++||++++|+||++|.|++
T Consensus 186 p~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G~l~~ 226 (323)
T 1afs_A 186 PVCNQVECHLYLNQSKMLDYCKSKDIILVSYCTLGSSRDKT 226 (323)
T ss_dssp CSEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTSCCCCTT
T ss_pred CEEEeeccccccchHHHHHHHHHcCCEEEEecCccCCcccc
Confidence 79999999999877543 44 9999999999999999875
No 29
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=8.1e-39 Score=255.04 Aligned_cols=158 Identities=20% Similarity=0.221 Sum_probs=135.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCC-CCCCCHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKY-SYCGDPAYLRAACEASL 71 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~-~~~~~~~~i~~~~~~sL 71 (183)
|+|. ++.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ..+.+++.+++++++||
T Consensus 20 Gt~~--~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~~~i~TK~~~~~~~~~~v~~~~~~SL 94 (278)
T 1hw6_A 20 GVFK--VPPADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDDLFITTKLWNDRHDGDEPAAAIAESL 94 (278)
T ss_dssp ECCS--CCGGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGGCEEEEEECCC-----CHHHHHHHHH
T ss_pred ECCc--CChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhhEEEEEeeCCCCCCHHHHHHHHHHHH
Confidence 5564 3467899999999999999999999999 799999999842 342 34678899999999999
Q ss_pred HHcCCCCcceEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-
Q 044886 72 KRLDVDCIDLYDQHRIDT-KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE- 147 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~- 147 (183)
++||+||||+|++|||++ ..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++++...
T Consensus 95 ~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~~~l~ 174 (278)
T 1hw6_A 95 AKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGVVPAVNQIELHPAYQQREIT 174 (278)
T ss_dssp HHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHH
T ss_pred HHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhcCCCceeEEEEeCcccCCHHHH
Confidence 999999999999999987 467899999999999999999999999999999999876 5679999999999988543
Q ss_pred HH--hcCCeEEEeccCCccc
Q 044886 148 EM--ELGIGIVAYNLLECEF 165 (183)
Q Consensus 148 ~~--~~~i~v~a~~~l~~G~ 165 (183)
++ ++||++++|+||++|.
T Consensus 175 ~~~~~~gi~v~a~spl~~G~ 194 (278)
T 1hw6_A 175 DWAAAHDVKIESWGPLGQGK 194 (278)
T ss_dssp HHHHHTTCEEEEESTTGGGS
T ss_pred HHHHHcCCEEEEeccccCCC
Confidence 44 9999999999999993
No 30
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=1.2e-38 Score=258.86 Aligned_cols=167 Identities=22% Similarity=0.255 Sum_probs=146.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhCC---------------C-CCCCCCHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG---------------K-YSYCGDPAYLRAA 66 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~~---------------k-~~~~~~~~~i~~~ 66 (183)
|+|. .+.+++.++|++|+++|||+||||+.|| +|+.+|++|++.. | +....+++.++++
T Consensus 19 Gtw~--~~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~i~~~ 93 (324)
T 4gac_A 19 GTWK--SEPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPA 93 (324)
T ss_dssp ECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSBCGGGCEEEEEECGGGCSHHHHHHH
T ss_pred ECCC--CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccceecccccccccccCCCCCCHHHHHHH
Confidence 5675 5789999999999999999999999999 8999999998420 1 2357789999999
Q ss_pred HHHHHHHcCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhh
Q 044886 67 CEASLKRLDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHT 127 (183)
Q Consensus 67 ~~~sL~~lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~ 127 (183)
+++||++||+||||+|++|||++ ..+++++|++|++|+++||||+||+|||++++++++..
T Consensus 94 ~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~ 173 (324)
T 4gac_A 94 LRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKETWKALEVLVAKGLVKALGLSNFNSRQIDDVLS 173 (324)
T ss_dssp HHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHH
T ss_pred HHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHHHHHHHHHHHHCCCeeEecCCCCCHHHHHHHHH
Confidence 99999999999999999999863 35689999999999999999999999999999999877
Q ss_pred c--CCeeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCCCCCCCC
Q 044886 128 I--HPITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSSGPKLIH 174 (183)
Q Consensus 128 ~--~~~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~~~~~~~ 174 (183)
. ..+.++|+++|+...+... .+ ++||++++|+||++|.+++++....
T Consensus 174 ~~~~~~~~~q~~~~~~~~~~~l~~~~~~~gi~~~a~spL~~g~~~~~~~~~~ 225 (324)
T 4gac_A 174 VASVRPAVLQVECHPYLAQNELIAHCHARGLEVTAYSPLGSSDRAWRHPDEP 225 (324)
T ss_dssp HCSSCCCEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCGGGGGGSTTSC
T ss_pred hCCCCcceeeeccCchhhHHHHHHHHHHhceeeeecCCcccCccccCCCCCc
Confidence 6 5689999999998877544 44 9999999999999999998876543
No 31
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=2e-38 Score=258.47 Aligned_cols=157 Identities=25% Similarity=0.308 Sum_probs=139.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHHHHHHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAACEASLKR 73 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~~~sL~~ 73 (183)
.+.+++.++|+.|+++|||+||||+.|| +|..+|++|++ . +| +....+++.+++++++||++
T Consensus 29 ~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~~~R~~~~I~TK~~~~~~~~~~v~~~~e~SL~r 105 (331)
T 1s1p_A 29 VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGSVKREDIFYTSKLWSTFHRPELVRPALENSLKK 105 (331)
T ss_dssp SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCCCCchheEEEeccCCccCCHHHHHHHHHHHHHH
Confidence 5788999999999999999999999999 79999999975 1 23 22467899999999999999
Q ss_pred cCCCCcceEEeccCCC-------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--C--C
Q 044886 74 LDVDCIDLYDQHRIDT-------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--H--P 130 (183)
Q Consensus 74 lg~~~iDl~~lh~~~~-------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~--~ 130 (183)
||+||||+|++|||+. ..++.++|++|++|+++||||+||||||++++++++++. . +
T Consensus 106 Lg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~ 185 (331)
T 1s1p_A 106 AQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYK 185 (331)
T ss_dssp HTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCC
T ss_pred hCCCcEEEEEeccCcccCCCcccCCccccccccccccCHHHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCC
Confidence 9999999999999942 236789999999999999999999999999999999886 3 6
Q ss_pred eeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCC
Q 044886 131 ITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 131 ~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
|+++|++||++.++... ++ ++||++++|+||++|.|++
T Consensus 186 p~v~Q~~~~~~~~~~~l~~~~~~~gI~v~a~spL~~G~l~~ 226 (331)
T 1s1p_A 186 PVCNQVECHPYFNRSKLLDFCKSKDIVLVAYSALGSQRDKR 226 (331)
T ss_dssp CSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTSCCCCTT
T ss_pred CceeeeecCCCcChHHHHHHHHHcCCEEEEeccccCCcccc
Confidence 79999999999877543 44 9999999999999999875
No 32
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=2.8e-38 Score=256.09 Aligned_cols=158 Identities=24% Similarity=0.296 Sum_probs=139.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CCC-CCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GKY-SYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k~-~~~~~~~~i~~~~ 67 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ....+++.+++++
T Consensus 19 Gt~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R~~v~I~TK~~~~~~~~~~i~~~~ 93 (316)
T 3o3r_A 19 GTWK--SPPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVRREDLFIVSKLWSTFFEKSLMKEAF 93 (316)
T ss_dssp BCTT--CCTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHH
T ss_pred ECCc--CCcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCChHHcEEEeeeCCCcCCHHHHHHHH
Confidence 5675 4678999999999999999999999999 799999999741 232 3457899999999
Q ss_pred HHHHHHcCCCCcceEEeccCC-------------------CCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc
Q 044886 68 EASLKRLDVDCIDLYDQHRID-------------------TKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI 128 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~-------------------~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~ 128 (183)
++||++||+||||+|++|||+ ...++.++|++|++|+++||||+||+|||+.++++++++.
T Consensus 94 ~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~ 173 (316)
T 3o3r_A 94 QKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDAWEGMEELVDQGLVKALGVSNFNHFQIERLLNK 173 (316)
T ss_dssp HHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTC
T ss_pred HHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHHHHHHHHHHHcCCCcEEEEecCCHHHHHHHHHh
Confidence 999999999999999999996 3467899999999999999999999999999999999875
Q ss_pred C----CeeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccc
Q 044886 129 H----PITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEF 165 (183)
Q Consensus 129 ~----~~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~ 165 (183)
. +|+++|++||++.++... ++ ++||++++|+||++|.
T Consensus 174 ~~~~~~p~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~ 217 (316)
T 3o3r_A 174 PGLKHKPVTNQVECHPYLTQEKLIQYCHSKGIAVIAYSPLGSPD 217 (316)
T ss_dssp TTCCSCCCEEEEECBTTBCCHHHHHHHHTTTCEEEEECTTCCTT
T ss_pred CCCCCCceEeeccCCcccchHHHHHHHHHcCCEEEEecccCCCC
Confidence 2 589999999999876433 44 9999999999999994
No 33
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=3.8e-38 Score=255.86 Aligned_cols=159 Identities=26% Similarity=0.324 Sum_probs=139.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~ 67 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|..+|++|++ . +| +....+++.+++++
T Consensus 22 Gt~~--~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R~~~~i~TK~~~~~~~~~~v~~~~ 96 (322)
T 1mi3_A 22 GCWK--LANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGLVKREEIFLTSKLWNNYHDPKNVETAL 96 (322)
T ss_dssp ECTT--CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSHHHHHHHH
T ss_pred eCCc--CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCChhhEEEEEeeCCCCCCHHHHHHHH
Confidence 5564 5789999999999999999999999999 79999999975 1 23 23467899999999
Q ss_pred HHHHHHcCCCCcceEEeccCCC-------------------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHH
Q 044886 68 EASLKRLDVDCIDLYDQHRIDT-------------------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTI 122 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~-------------------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l 122 (183)
++||++||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||+.+++
T Consensus 97 ~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l 176 (322)
T 1mi3_A 97 NKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIKSIGVSNFPGALL 176 (322)
T ss_dssp HHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCCBCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHH
T ss_pred HHHHHHhCCCCeeeEEEecCcccccCcccccccccccccccccccccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHH
Confidence 9999999999999999999842 236789999999999999999999999999999
Q ss_pred HHHhhc--CCeeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCcccc
Q 044886 123 RRAHTI--HPITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFL 166 (183)
Q Consensus 123 ~~~~~~--~~~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l 166 (183)
+++++. .+|+++|++||++.++... ++ ++||++++|+||++|.+
T Consensus 177 ~~~~~~~~~~~~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spL~~G~~ 225 (322)
T 1mi3_A 177 LDLLRGATIKPAVLQVEHHPYLQQPKLIEFAQKAGVTITAYSSFGPQSF 225 (322)
T ss_dssp HHHHHHCSSCCCEEEEECBTTBCCHHHHHHHHHTTCEEEEECTTTTHHH
T ss_pred HHHHHhCCCCceEeecccCcCcCcHHHHHHHHHcCCEEEEECCCCCCCc
Confidence 999876 5689999999999877543 44 99999999999999944
No 34
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=1.9e-38 Score=256.61 Aligned_cols=159 Identities=22% Similarity=0.230 Sum_probs=139.7
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh---C-----------CC-CCCCCCHHHHHHHHHH
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE---D-----------GK-YSYCGDPAYLRAACEA 69 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~-----------~k-~~~~~~~~~i~~~~~~ 69 (183)
|+ .+.+++.++|+.|+++|||+||||+.|| +|..+|++|+. . +| +....+++.+++++++
T Consensus 30 ~~--~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al~~~~~~g~~~R~~~~i~TK~~~~~~~~~~v~~~~~~ 104 (312)
T 1zgd_A 30 DF--TCKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEALKEAIELGLVTRDDLFVTSKLWVTENHPHLVIPALQK 104 (312)
T ss_dssp CT--TCCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSGGGHHHHHHH
T ss_pred cC--CCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCCcchheEEEeccCCCCCCHHHHHHHHHH
Confidence 65 3567899999999999999999999999 89999999975 1 23 2346789999999999
Q ss_pred HHHHcCCCCcceEEeccCCC----------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCe
Q 044886 70 SLKRLDVDCIDLYDQHRIDT----------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPI 131 (183)
Q Consensus 70 sL~~lg~~~iDl~~lh~~~~----------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~ 131 (183)
||++||+||||+|++|||+. ..+..++|++|++|+++||||+||+|||+.++++++++. .+|
T Consensus 105 SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p 184 (312)
T 1zgd_A 105 SLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADLLPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLP 184 (312)
T ss_dssp HHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGEECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCC
T ss_pred HHHHhCCCceeEEEEeccCcccCccccccccccccccccHHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCc
Confidence 99999999999999999963 246889999999999999999999999999999999886 478
Q ss_pred eEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccccCC
Q 044886 132 TVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEFLSS 168 (183)
Q Consensus 132 ~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~l~~ 168 (183)
+++|++||+++++... ++ ++||++++|+||++|.+.+
T Consensus 185 ~~~Q~~~~~~~~~~~l~~~~~~~gi~v~a~spl~~G~~~~ 224 (312)
T 1zgd_A 185 AVNQVEMNLAWQQKKLREFCNAHGIVLTAFSPVRKGASRG 224 (312)
T ss_dssp SEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTTTTTTTS
T ss_pred eEEeeecCcccCCHHHHHHHHHcCCEEEEecCCCCCCCCC
Confidence 9999999999987443 45 9999999999999997653
No 35
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=3e-38 Score=253.64 Aligned_cols=157 Identities=21% Similarity=0.179 Sum_probs=137.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC----------CCCCCCCCHHHHHHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED----------GKYSYCGDPAYLRAACEASLK 72 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~----------~k~~~~~~~~~i~~~~~~sL~ 72 (183)
|+|. ++.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|..+.. .+.+++++++||+
T Consensus 42 Gt~~--~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~~v~I~TK~~~~~-~~~v~~~~e~SL~ 115 (296)
T 1mzr_A 42 GVWQ--ASNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREELFITTKLWNDD-HKRPREALLDSLK 115 (296)
T ss_dssp ECCS--CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGGCEEEEEECGGG-TTCHHHHHHHHHH
T ss_pred ECCC--CCHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCcccEEEEeccCCCc-HHHHHHHHHHHHH
Confidence 5564 4578999999999999999999999999 799999999853 2322211 2789999999999
Q ss_pred HcCCCCcceEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCcHH-H
Q 044886 73 RLDVDCIDLYDQHRIDT-KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDVKE-E 148 (183)
Q Consensus 73 ~lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~-~ 148 (183)
+||+||||+|++|||++ ..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++++... +
T Consensus 116 rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~~l~~ 195 (296)
T 1mzr_A 116 KLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQIELHPLMQQRQLHA 195 (296)
T ss_dssp HHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHSCCCSEEEEECBTTBCCHHHHH
T ss_pred HhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeCCCHHHHHHHHHhcCCCceEEeeecccccCCHHHHH
Confidence 99999999999999987 478899999999999999999999999999999999875 5689999999999987544 4
Q ss_pred H--hcCCeEEEeccCCccc
Q 044886 149 M--ELGIGIVAYNLLECEF 165 (183)
Q Consensus 149 ~--~~~i~v~a~~~l~~G~ 165 (183)
+ ++||++++|+||++|.
T Consensus 196 ~~~~~gI~v~a~spL~~G~ 214 (296)
T 1mzr_A 196 WNATHKIQTESWSPLAQGG 214 (296)
T ss_dssp HHHHTTCEEEEESTTTTTC
T ss_pred HHHHCCCeEEEeccccCCc
Confidence 4 9999999999999994
No 36
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=6.7e-38 Score=251.83 Aligned_cols=155 Identities=21% Similarity=0.233 Sum_probs=138.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CCC-CCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GKY-SYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k~-~~~~~~~~i~~~~ 67 (183)
|+|. ++.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +|. ..+.+++.+++++
T Consensus 32 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~~v~I~TK~~~~~~~~~~v~~~~ 106 (298)
T 1vp5_A 32 GVFQ--IPPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAF 106 (298)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSSHHHHHHH
T ss_pred eCCc--CChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCChhhEEEEeccCCCCCCHHHHHHHH
Confidence 5664 4578899999999999999999999999 799999999742 232 2467889999999
Q ss_pred HHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCc
Q 044886 68 EASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDV 145 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~ 145 (183)
++||++||+||||+|++|||++ +..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||+++++.
T Consensus 107 ~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~~ 184 (298)
T 1vp5_A 107 EKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQ 184 (298)
T ss_dssp HHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCCH
T ss_pred HHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCceEEEEecccccCCH
Confidence 9999999999999999999986 7889999999999999999999999999999999886 46799999999999875
Q ss_pred HH-HH--hcCCeEEEeccCCcc
Q 044886 146 KE-EM--ELGIGIVAYNLLECE 164 (183)
Q Consensus 146 ~~-~~--~~~i~v~a~~~l~~G 164 (183)
.. ++ ++||++++|+||++|
T Consensus 185 ~l~~~~~~~gI~v~a~spL~~G 206 (298)
T 1vp5_A 185 EEIEFMRNYNIQPEAWGPFAEG 206 (298)
T ss_dssp HHHHHHHHTTCEEEEESTTGGG
T ss_pred HHHHHHHHCCCEEEEecccccC
Confidence 44 44 999999999999999
No 37
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=5.2e-38 Score=254.28 Aligned_cols=164 Identities=26% Similarity=0.278 Sum_probs=140.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k-~~~~~~~~~i~~~~ 67 (183)
|+|.. .+.+++.++|++|+++|||+||||+.|| +|..+|++++.. +| +..+.+++.+++++
T Consensus 57 Gt~~~-~d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r~~~~i~~k~~~~~~~~~~~~~~~ 132 (314)
T 3b3d_A 57 GVFQV-EEGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISREDLFITSKVWNADLGYEETLAAF 132 (314)
T ss_dssp ECCSC-CCSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCGGGCEEEEEECGGGCSHHHHHHHH
T ss_pred ECCCC-CCHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCcccccccccCcCCCCCHHHHHHHH
Confidence 67765 3678899999999999999999999999 899999998731 12 34578999999999
Q ss_pred HHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcccCCc
Q 044886 68 EASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLRSRDV 145 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~ 145 (183)
++||++||+||||+|++|||++ ....++|++|++|+++||||+||+|||+.++++++.+. .++.++|+++++...+.
T Consensus 133 e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~ 211 (314)
T 3b3d_A 133 ETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVSNFQIHHLEDLMTAAEIKPMINQVEFHPRLTQK 211 (314)
T ss_dssp HHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHTTTCSSCCSEEEEECBTTBCCH
T ss_pred HHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEecCCchHHHHHHHHhcCCCeEEEEeccccccchH
Confidence 9999999999999999999975 46788999999999999999999999999999999887 44667777776665554
Q ss_pred HH-HH--hcCCeEEEeccCCccccCCCCC
Q 044886 146 KE-EM--ELGIGIVAYNLLECEFLSSGPK 171 (183)
Q Consensus 146 ~~-~~--~~~i~v~a~~~l~~G~l~~~~~ 171 (183)
.. ++ ++||++++|+||++|.|++++.
T Consensus 212 ~ll~~c~~~gI~v~a~sPL~~G~L~~~~~ 240 (314)
T 3b3d_A 212 ELIRYCQNQGIQMEAWSPLMQGQLLDHPV 240 (314)
T ss_dssp HHHHHHHHHTCEEEEESTTGGGTTTTCHH
T ss_pred HHHHHHHHcCCEEEEeccccCCcccCchh
Confidence 33 44 9999999999999999998653
No 38
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=8e-38 Score=255.24 Aligned_cols=158 Identities=24% Similarity=0.308 Sum_probs=139.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k-~~~~~~~~~i~~~~ 67 (183)
|+|. .+.+++.++|+.|+++|||+||||+.|| +|+.+|++|++. +| +....+++.+++++
T Consensus 42 Gt~~--~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~~~~~~~v~~~~ 116 (335)
T 3h7u_A 42 GTWQ--ASPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDRVVKREDLFITSKLWCTDHDPQDVPEAL 116 (335)
T ss_dssp ECTT--CCHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCGGGCEEEEEECGGGCSTTHHHHHH
T ss_pred eCCc--CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcCCCCcceeEEEeeeCCCCCCHHHHHHHH
Confidence 5564 5788999999999999999999999999 899999999841 23 23577889999999
Q ss_pred HHHHHHcCCCCcceEEeccCCC--------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCe
Q 044886 68 EASLKRLDVDCIDLYDQHRIDT--------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPI 131 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~--------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~ 131 (183)
++||++||+||||+|++|||+. ..++.++|++|++|+++||||+||+|||++++++++++. .+|
T Consensus 117 e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~ 196 (335)
T 3h7u_A 117 NRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTWKAMEALYDSGKARAIGVSNFSTKKLADLLELARVPP 196 (335)
T ss_dssp HHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCC
T ss_pred HHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHHHHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCe
Confidence 9999999999999999999963 246899999999999999999999999999999999876 578
Q ss_pred eEEeeecCcccCCcHH-HH--hcCCeEEEeccCCccc
Q 044886 132 TVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECEF 165 (183)
Q Consensus 132 ~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G~ 165 (183)
+++|++||++.++... ++ ++||++++|+||++|.
T Consensus 197 ~~~Q~~~~~~~~~~~l~~~~~~~gI~v~a~sPL~~g~ 233 (335)
T 3h7u_A 197 AVNQVECHPSWRQTKLQEFCKSKGVHLSAYSPLGSPG 233 (335)
T ss_dssp SEEEEECBTTBCCHHHHHHHHHHTCEEEEESTTCCTT
T ss_pred EEEecccccccCCHHHHHHHHHCCCEEEEeccCcCCC
Confidence 9999999999987544 44 9999999999999863
No 39
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=3.1e-37 Score=252.38 Aligned_cols=156 Identities=28% Similarity=0.351 Sum_probs=137.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-cCCCeEeCcCCCCCCchHHHHHHHHhh---C----------CC-CCCCCCHHHHHHHH
Q 044886 3 AFYGPSKPESGMIALTNHAID-SGINVLDTSDVYGPHTNEILLGKVIYE---D----------GK-YSYCGDPAYLRAAC 67 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~sE~~~g~~l~~---~----------~k-~~~~~~~~~i~~~~ 67 (183)
|+|+. + +++.++|+.|++ +|||+||||+.|| +|..+|++|+. . +| +....+++.+++++
T Consensus 54 Gt~~~--~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~~R~~v~I~TK~~~~~~~~~~v~~al 127 (344)
T 2bgs_A 54 GTWRA--G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGIDRKDLFVTSKIWCTNLAPERVRPAL 127 (344)
T ss_dssp ECTTC--G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTCCGGGCEEEEEECGGGCSHHHHHHHH
T ss_pred eCCCC--c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCCCcccEEEEeccCCCCCCHHHHHHHH
Confidence 56653 4 889999999999 9999999999999 79999999975 1 23 23467899999999
Q ss_pred HHHHHHcCCCCcceEEeccCCC---------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CC
Q 044886 68 EASLKRLDVDCIDLYDQHRIDT---------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HP 130 (183)
Q Consensus 68 ~~sL~~lg~~~iDl~~lh~~~~---------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~ 130 (183)
++||++||+||||+|+||||+. ..++.++|++|++|+++||||+||||||++++++++++. .+
T Consensus 128 e~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~ 207 (344)
T 2bgs_A 128 ENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIP 207 (344)
T ss_dssp HHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSC
T ss_pred HHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCC
Confidence 9999999999999999999962 236789999999999999999999999999999999876 56
Q ss_pred eeEEeeecCcccCCcHH-HH--hcCCeEEEeccCCcc
Q 044886 131 ITVVRLEWSLRSRDVKE-EM--ELGIGIVAYNLLECE 164 (183)
Q Consensus 131 ~~~~q~~~~~~~~~~~~-~~--~~~i~v~a~~~l~~G 164 (183)
|+++|++||++.++... ++ ++||++++|+||++|
T Consensus 208 p~v~Q~e~~~~~~~~~ll~~~~~~gI~v~a~spL~~G 244 (344)
T 2bgs_A 208 PAVCQMEMHPGWKNDKIFEACKKHGIHITAYSPLGSS 244 (344)
T ss_dssp CSEEEEECBTTBCCHHHHHHHHHTTCEEEEESTTCTT
T ss_pred ceeeecccCcccCcHHHHHHHHHCCCEEEEeCcccCC
Confidence 89999999999876543 44 999999999999998
No 40
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-37 Score=252.85 Aligned_cols=149 Identities=24% Similarity=0.316 Sum_probs=133.2
Q ss_pred HHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC--------------CC-CCCCCCHHHHHHHHHHHHHHcCCC
Q 044886 13 GMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED--------------GK-YSYCGDPAYLRAACEASLKRLDVD 77 (183)
Q Consensus 13 ~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~--------------~k-~~~~~~~~~i~~~~~~sL~~lg~~ 77 (183)
++.++|+.|+++|||+||||+.|| +|+.+|++|++. +| +..+.+++.+++++++||++||+|
T Consensus 46 ~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g~~~R~~v~I~TK~~~~~~~~~~i~~~~e~SL~rLg~d 122 (331)
T 3h7r_A 46 MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDGFVKREELFITSKLWSNDHLPEDVPKALEKTLQDLQID 122 (331)
T ss_dssp CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTTSSCGGGCEEEEEECGGGCSTTHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcCCCCchhEEEEEeeCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 678999999999999999999999 899999999851 23 335678899999999999999999
Q ss_pred CcceEEeccCCC--------------CCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc--CCeeEEeeecCcc
Q 044886 78 CIDLYDQHRIDT--------------KVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI--HPITVVRLEWSLR 141 (183)
Q Consensus 78 ~iDl~~lh~~~~--------------~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~--~~~~~~q~~~~~~ 141 (183)
|||+|++|||+. ..+..++|++|++|+++||||+||+|||++++++++++. .+|+++|++||++
T Consensus 123 yiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~ 202 (331)
T 3h7r_A 123 YVDLYLIHWPASLKKESLMPTPEMLTKPDITSTWKAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPV 202 (331)
T ss_dssp CBSEEEECCSCEECTTCSSCCGGGEECCCHHHHHHHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTT
T ss_pred eeEEEEEecCcccccccccccccccccCCHHHHHHHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccc
Confidence 999999999964 356899999999999999999999999999999999876 4789999999999
Q ss_pred cCCcHH-HH--hcCCeEEEeccCCcc
Q 044886 142 SRDVKE-EM--ELGIGIVAYNLLECE 164 (183)
Q Consensus 142 ~~~~~~-~~--~~~i~v~a~~~l~~G 164 (183)
.++... ++ ++||++++|+||++|
T Consensus 203 ~~~~~l~~~~~~~gI~v~a~spL~~g 228 (331)
T 3h7r_A 203 WQQQGLHELCKSKGVHLSGYSPLGSQ 228 (331)
T ss_dssp BCCHHHHHHHHHHTCEEEEESTTSCS
T ss_pred cCCHHHHHHHHHCCCEEEEeCCCCCC
Confidence 887543 44 999999999999986
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.77 E-value=8.9e-06 Score=72.80 Aligned_cols=97 Identities=11% Similarity=-0.013 Sum_probs=72.6
Q ss_pred HHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec--CcCH---H----------------HHHHH
Q 044886 67 CEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS--EAFA---S----------------TIRRA 125 (183)
Q Consensus 67 ~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s--~~~~---~----------------~l~~~ 125 (183)
++.||..|+++|+|++ +|..+.. ...++++++++++.+|+|+++|++ ++.. . ...+.
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5678889999999995 7655432 235789999999999999999665 3332 0 23344
Q ss_pred hhcCCeeEEeeecCcccCCcHHHH--hcCCeEEEeccCCc-ccc
Q 044886 126 HTIHPITVVRLEWSLRSRDVKEEM--ELGIGIVAYNLLEC-EFL 166 (183)
Q Consensus 126 ~~~~~~~~~q~~~~~~~~~~~~~~--~~~i~v~a~~~l~~-G~l 166 (183)
+....++++++.||-..+.. ... ++|++|++++|..+ |++
T Consensus 309 i~tGa~dv~vV~~n~i~~~l-l~~a~~~Gm~Vit~sp~~~~Grp 351 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRGDI-VPEAQKLKIPVIASNPKIMYGLP 351 (807)
T ss_dssp HHHTCCSEEEECSSSCCTTH-HHHHHHTTCCEEECSTTCCTTCC
T ss_pred hhcCCCeEEEEEecCCChHH-HHHHHHCCCEEEEechhhhcCCC
Confidence 56788999999999887432 233 99999999999986 554
No 42
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=76.35 E-value=8.8 Score=28.27 Aligned_cols=65 Identities=8% Similarity=0.039 Sum_probs=42.9
Q ss_pred HHHcCCCCcceEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeec
Q 044886 71 LKRLDVDCIDLYDQHRIDT-KVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~ 138 (183)
..++|.||+=+.+. -..+ ..+.+ ....|.+.. ...+..+||. |-+++.+.++.+...++++|++-
T Consensus 17 a~~~GaD~iGfif~-~~SpR~V~~~-~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 83 (203)
T 1v5x_A 17 AEALGAFALGFVLA-PGSRRRIAPE-AARAIGEAL-GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHG 83 (203)
T ss_dssp HHHHTCSEEEEECC-TTCTTBCCHH-HHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECS
T ss_pred HHHcCCCEEEEEec-CCCCCcCCHH-HHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 34679999888742 2222 23333 333332222 2468899998 56889999999999999999963
No 43
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=75.70 E-value=31 Score=28.68 Aligned_cols=100 Identities=15% Similarity=0.221 Sum_probs=60.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHcCCCCcceE
Q 044886 3 AFYGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLY 82 (183)
Q Consensus 3 ~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~~k~~~~~~~~~i~~~~~~sL~~lg~~~iDl~ 82 (183)
|+||.|++.++-.++++..-+.|.|.+ .|++..-. .-..+|.-.++.+++. ++.+..+.-+-..++++
T Consensus 8 GFYG~PWS~e~R~~l~~f~g~~kmNtY----iYAPKDDp-------yhr~~WRe~Yp~eel~-~l~eLv~~a~~~~V~Fv 75 (447)
T 2xsa_A 8 GFYGRDWRRDERATVMDWIAAAGMNTY----IYGPKDDV-------HVRARWRVPYDAAGLA-RLTELRDAAAARGMVFY 75 (447)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCCEE----EECCTTCT-------TTTTTTTSCCCHHHHH-HHHHHHHHHHTTTCEEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHcCCceE----EEccCCCh-------HHHHhhcccCCHHHHH-HHHHHHHHHHHcCCEEE
Confidence 899999999999999999999999977 45521100 0013344445555543 45555555455556665
Q ss_pred EeccCCCC------CCHHHHHHHHHHHHHcCCccEEEec
Q 044886 83 DQHRIDTK------VPIEVTIGELKRLVEEGKIKHIDLS 115 (183)
Q Consensus 83 ~lh~~~~~------~~~~~~~~~l~~l~~~G~ir~iG~s 115 (183)
+-=.|.-. .++..+.+.++++.+-| ||.++|.
T Consensus 76 ~aisPG~di~~s~~~d~~~L~~K~~ql~~lG-Vr~FaIl 113 (447)
T 2xsa_A 76 VSLAPCLDVTYSDPQDRAALLARVDQLARAG-LRNLVLL 113 (447)
T ss_dssp EEECCCSSCCTTCHHHHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred EEeCCCcccCCCCHHHHHHHHHHHHHHHHhC-CCEEEEe
Confidence 54444211 12344566777777765 5777775
No 44
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=75.40 E-value=11 Score=31.77 Aligned_cols=65 Identities=20% Similarity=0.115 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc-CCeeEEe
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI-HPITVVR 135 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~-~~~~~~q 135 (183)
+.++..|+ +|+.+.|+|.+- .++++.++.+++.+++|+..+||+-..-.+.++++++. ..||++-
T Consensus 193 Evd~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlvt 258 (552)
T 2fkn_A 193 EVDEKRID-------KRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVT 258 (552)
T ss_dssp ESCHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEEC
T ss_pred EECHHHHH-------HHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCC
Confidence 55565555 455678999875 67899999999999999999999999888999999887 3455543
No 45
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=75.26 E-value=11 Score=31.74 Aligned_cols=66 Identities=23% Similarity=0.252 Sum_probs=52.4
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc-CCeeEE
Q 044886 56 YCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI-HPITVV 134 (183)
Q Consensus 56 ~~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~-~~~~~~ 134 (183)
.+.++..|++ |+.+.|+|.+- .++++.++.+++.+++|+..+||+-..-.+.++++++. ..||++
T Consensus 191 ~Evd~~ri~~-------R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlv 256 (551)
T 1x87_A 191 IEVDPARIQR-------RIDTNYLDTMT-------DSLDAALEMAKQAKEEKKALSIGLVGNAAEVLPRLVETGFVPDVL 256 (551)
T ss_dssp EESCHHHHHH-------HHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHTTCCCSEE
T ss_pred EEECHHHHHH-------HHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCC
Confidence 3556666654 55678999875 67899999999999999999999999888989999887 345554
Q ss_pred e
Q 044886 135 R 135 (183)
Q Consensus 135 q 135 (183)
-
T Consensus 257 t 257 (551)
T 1x87_A 257 T 257 (551)
T ss_dssp C
T ss_pred C
Confidence 3
No 46
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=73.44 E-value=8.6 Score=28.36 Aligned_cols=65 Identities=8% Similarity=-0.002 Sum_probs=42.5
Q ss_pred HHHcCCCCcceEEeccCCC-CCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeec
Q 044886 71 LKRLDVDCIDLYDQHRIDT-KVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~ 138 (183)
..++|.||+=+.+. -..+ ..+.+ ....|.+.. ...+..+||. |.+++.+.++.+...++++|++-
T Consensus 18 a~~~GaD~iGfif~-~~SpR~V~~~-~a~~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 84 (205)
T 1nsj_A 18 SVESGADAVGFVFY-PKSKRYISPE-DARRISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHG 84 (205)
T ss_dssp HHHHTCSEEEEECC-TTCTTBCCHH-HHHHHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HHHcCCCEEEEEec-CCCCCcCCHH-HHHHHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 34679999888742 2222 23333 333332222 2468899997 57889999999888899999963
No 47
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=73.25 E-value=11 Score=31.77 Aligned_cols=65 Identities=15% Similarity=0.162 Sum_probs=51.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhc-CCeeEEe
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTI-HPITVVR 135 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~-~~~~~~q 135 (183)
+.++..|++ |+.+.|+|.+- .++++.++.+++.+++|+..+||+-..-.+.++++++. ..||++-
T Consensus 197 Evd~~ri~~-------R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~Dlvt 262 (557)
T 1uwk_A 197 ESQQSRIDF-------RLETRYVDEQA-------TDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVT 262 (557)
T ss_dssp ESCHHHHHH-------HHHTTSCCEEC-------SSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEEC
T ss_pred EECHHHHHH-------HHhCCCceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCC
Confidence 556655554 55678999864 67899999999999999999999999888888888877 3445543
No 48
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=70.73 E-value=22 Score=28.72 Aligned_cols=145 Identities=8% Similarity=-0.038 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-C---CCC-----CCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-G---KYS-----YCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~---k~~-----~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
+.++..+..+.+++.|++.|..--... -..+...-+++++. + ... ...+.+...+ +-+.|+.+++ +
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~-~~~d~~~v~avR~a~g~~~~l~~vDan~~~~~~~A~~-~~~~l~~~~i---~ 216 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKN-LDADEEFLSRVKEEFGSRVRIKSYDFSHLLNWKDAHR-AIKRLTKYDL---G 216 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSC-HHHHHHHHHHHHHHHGGGCEEEEEECTTCSCHHHHHH-HHHHHTTCCS---S
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCC-HHHHHHHHHHHHHHcCCCCcEEEecCCCCcCHHHHHH-HHHHHHhcCC---C
Confidence 567888888999999999987432111 01222333444432 1 111 1234443322 3344454443 3
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCe
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIG 154 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~ 154 (183)
+.++..|-+.. .++.+.++++.-.|-- |=+.++...++++++....+++|+..+-.--- ... .+ .+|+.
T Consensus 217 ~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~ 291 (391)
T 3gd6_A 217 LEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKD 291 (391)
T ss_dssp CCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred cceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCE
Confidence 35566664322 2677888888766665 88889999999999998899999987654311 111 23 88999
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
++..+.+.++
T Consensus 292 ~~~~~~~es~ 301 (391)
T 3gd6_A 292 VVLGTTQELS 301 (391)
T ss_dssp EEECCCCCCH
T ss_pred EEecCCCccH
Confidence 9887765554
No 49
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=70.21 E-value=14 Score=25.83 Aligned_cols=82 Identities=15% Similarity=0.086 Sum_probs=60.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCcCHHHHHHHhhcCCeeE
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEAFASTIRRAHTIHPITV 133 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~~~~~l~~~~~~~~~~~ 133 (183)
..+.+.+.+.+.+.-..+|++ ++++| +..--+.++.+.+...+ |.|-.=|--+++.-.++.++.....-+
T Consensus 23 ~~tl~di~~~l~~~a~~~g~~-v~~~Q------SN~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~ 95 (149)
T 2uyg_A 23 RTTLEELEALCEAWGAELGLG-VVFRQ------TNYEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPV 95 (149)
T ss_dssp SCCHHHHHHHHHHHHHHTTCC-EEEEE------CSCHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCE
T ss_pred cCCHHHHHHHHHHHHHHcCCE-EEEEe------eCCHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCE
Confidence 568899999999999999985 88887 22345678888888644 233333444577778888888877789
Q ss_pred EeeecCcccCCc
Q 044886 134 VRLEWSLRSRDV 145 (183)
Q Consensus 134 ~q~~~~~~~~~~ 145 (183)
+.+..|-+..+.
T Consensus 96 VEVHiSNi~aRE 107 (149)
T 2uyg_A 96 VEVHLTNLHARE 107 (149)
T ss_dssp EEEESSCGGGSC
T ss_pred EEEEecCccccc
Confidence 999998776553
No 50
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=70.05 E-value=40 Score=26.88 Aligned_cols=140 Identities=10% Similarity=-0.073 Sum_probs=82.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCC-chHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
+.++..+..+.+.+.|++.|..-- |.. .....+-+++++. +. . ....+.+...+-+ +.|+.+ +
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~-~~l~~~-----~ 216 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKV--GADWQSDIDRIRACLPLLEPGEKAMADANQGWRVDNAIRLA-RATRDL-----D 216 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEEC--CSCHHHHHHHHHHHGGGSCTTCEEEEECTTCSCHHHHHHHH-HHTTTS-----C
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--cCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHH-HHHHhC-----C
Confidence 567777888899999999987421 110 1122233444432 21 1 1233454433322 224443 3
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i 153 (183)
+ ++..|-+ .++.+.++++.-.|--++--+ ++.+.++++++....+++|+..+..-.- ... .+ .+|+
T Consensus 217 i-~iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 289 (379)
T 2rdx_A 217 Y-ILEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRM 289 (379)
T ss_dssp C-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTC
T ss_pred e-EEeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCC
Confidence 4 4444432 578888888876665444433 6789999999998899999988765322 111 22 8899
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 290 ~~~~~~~~es~ 300 (379)
T 2rdx_A 290 PVVAEDSWGGE 300 (379)
T ss_dssp CEEEECSBCSH
T ss_pred eEEEeeccCcH
Confidence 98888655443
No 51
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=69.35 E-value=12 Score=30.94 Aligned_cols=61 Identities=10% Similarity=0.115 Sum_probs=37.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCcceEEec-cCCCC----------C-CHHH---HH-HHHHHHHHcCCccEEEecCcC
Q 044886 56 YCGDPAYLRAACEASLKRLDVDCIDLYDQH-RIDTK----------V-PIEV---TI-GELKRLVEEGKIKHIDLSEAF 118 (183)
Q Consensus 56 ~~~~~~~i~~~~~~sL~~lg~~~iDl~~lh-~~~~~----------~-~~~~---~~-~~l~~l~~~G~ir~iG~s~~~ 118 (183)
|..+.+.+.+.++..+ .|+.+++.++.+. .|... . +.++ .+ .+.+.|.+.| ...+++|+|.
T Consensus 215 Pget~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y~~yeis~fa 291 (457)
T 1olt_A 215 PKQTPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG-YQFIGMDHFA 291 (457)
T ss_dssp TTCCHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-CEEEETTEEE
T ss_pred CCCCHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCC-CeEEEechhc
Confidence 4567788888877654 6888888888775 22210 1 1122 23 3445556666 6889999864
No 52
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=66.14 E-value=6.7 Score=28.12 Aligned_cols=88 Identities=11% Similarity=-0.058 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCC
Q 044886 12 SGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKV 91 (183)
Q Consensus 12 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~~k~~~~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~ 91 (183)
+++.+++..|+..|-... .||.|.++.+.-+++.+..+....... +..-.++.-|.++++++....
T Consensus 25 ~~AA~llaqai~~~g~Iy----vfG~Ghs~~~~~e~~~~~e~l~~~~~~----------~~~~~i~~~D~vii~S~Sg~n 90 (170)
T 3jx9_A 25 FDVVRLLAQALVGQGKVY----LDAYGEFEGLYPMLSDGPDQMKRVTKI----------KDHKTLHAVDRVLIFTPDTER 90 (170)
T ss_dssp HHHHHHHHHHHHTTCCEE----EEECGGGGGGTHHHHTSTTCCTTEEEC----------CTTCCCCTTCEEEEEESCSCC
T ss_pred HHHHHHHHHHHhCCCEEE----EECCCcHHHHHHHHHcccCCccchhhh----------hhcCCCCCCCEEEEEeCCCCC
Confidence 577888888888876655 577778877777777655443210000 001167789999999996543
Q ss_pred CHHHHHHHHHHHHHcCCccEEEecC
Q 044886 92 PIEVTIGELKRLVEEGKIKHIDLSE 116 (183)
Q Consensus 92 ~~~~~~~~l~~l~~~G~ir~iG~s~ 116 (183)
...++..+++|++| +.-|++++
T Consensus 91 --~~~ie~A~~ake~G-~~vIaITs 112 (170)
T 3jx9_A 91 --SDLLASLARYDAWH-TPYSIITL 112 (170)
T ss_dssp --HHHHHHHHHHHHHT-CCEEEEES
T ss_pred --HHHHHHHHHHHHCC-CcEEEEeC
Confidence 45688888999997 58899988
No 53
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=65.03 E-value=52 Score=26.32 Aligned_cols=142 Identities=7% Similarity=-0.102 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
.+.++..+.++.+.+.|++.|..--.-. -..+...-+++++. +. . ....+.+...+ +-+.|+.+ +
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~iKiK~G~~-~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~-~~~~l~~~-----~ 216 (378)
T 3eez_A 144 KSVEETRAVIDRYRQRGYVAHSVKIGGD-VERDIARIRDVEDIREPGEIVLYDVNRGWTRQQALR-VMRATEDL-----H 216 (378)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHTTSCCTTCEEEEECTTCCCHHHHHH-HHHHTGGG-----T
T ss_pred CCHHHHHHHHHHHHhCCCCEEEeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHH-HHHHhccC-----C
Confidence 4678888889999999999988532111 01233334555543 11 1 12334443322 22334444 4
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID-LSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i 153 (183)
+ ++..|-+ .++.+.++++.-.|--.+ =+-++...++++++....+++|+.....-.- ... .+ .+|+
T Consensus 217 i-~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~ 289 (378)
T 3eez_A 217 V-MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGI 289 (378)
T ss_dssp C-CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTC
T ss_pred e-EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCC
Confidence 4 4555532 367778888776554333 2347889999999998899999987654311 111 23 8999
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 290 ~~~~~~~~es~ 300 (378)
T 3eez_A 290 DMFVMATGGSV 300 (378)
T ss_dssp EEEEECSSCSH
T ss_pred EEEcCCCCCCH
Confidence 99877666554
No 54
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=64.43 E-value=7.3 Score=30.12 Aligned_cols=52 Identities=15% Similarity=0.052 Sum_probs=38.8
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCCCC-----CCHHHHHHHHHHHHH-cCCccEEEec
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRIDTK-----VPIEVTIGELKRLVE-EGKIKHIDLS 115 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~~~-----~~~~~~~~~l~~l~~-~G~ir~iG~s 115 (183)
+++|.+.|++||+..=|.+++|.--.. ...+.++++|.++.. +|.+---..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 567788899999999999999986322 235678899988876 6766554443
No 55
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=64.28 E-value=61 Score=26.86 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=87.2
Q ss_pred CCCCCC-CHHHHHHHHHHHHH-cCCC-----eEeCc--CCCCC--CchHHHHHHHHhhCC---CCCCCCCHHHHHHHHHH
Q 044886 4 FYGPSK-PESGMIALTNHAID-SGIN-----VLDTS--DVYGP--HTNEILLGKVIYEDG---KYSYCGDPAYLRAACEA 69 (183)
Q Consensus 4 ~~g~~~-~~~~~~~~l~~A~~-~Gi~-----~~DtA--~~Yg~--g~sE~~~g~~l~~~~---k~~~~~~~~~i~~~~~~ 69 (183)
.|-++. +.+++.++|..|++ +|++ -+|+| ++|.. |.-+ + .++..+ .-....+++++.+-..+
T Consensus 215 gfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~--l--~f~~~~~~~~~~~~~t~~elid~y~~ 290 (441)
T 3qtp_A 215 GFAPNVSGAREALDLLVEAIAKAGYTGKIEIAMDCAASEFYNEETKKYD--L--GKKIPADKKDPSLVKDVDGLIAEYVD 290 (441)
T ss_dssp CBCCCCSSHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEETTTTEEE--T--TTTSCGGGCCGGGEECHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccchhHHHhhhccCCeEE--e--ecCCcccccccccccCHHHHHHHHHH
Confidence 343334 56899999999997 5886 26776 34531 1100 0 000100 00123577777777777
Q ss_pred HHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcC-CccEEE--ecCcCHHHHHHHhhcCCeeEEeeecCcccCCcH
Q 044886 70 SLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEG-KIKHID--LSEAFASTIRRAHTIHPITVVRLEWSLRSRDVK 146 (183)
Q Consensus 70 sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iG--~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 146 (183)
.++.. ++++|-.|-+..+ |+.+.+|.+.- +|--+| +...++..++++++....+++|+..|-+-.=-+
T Consensus 291 lle~y-----pI~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnqiGGITE 361 (441)
T 3qtp_A 291 YGKHY-----PIASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQIGTLTE 361 (441)
T ss_dssp HHHHS-----CEEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGGTCCHHH
T ss_pred Hhhhc-----ceeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecccccccHHH
Confidence 77754 3778888865544 55555555553 566566 234579999999999889999998885442211
Q ss_pred H----HH--hcCCeEEEec
Q 044886 147 E----EM--ELGIGIVAYN 159 (183)
Q Consensus 147 ~----~~--~~~i~v~a~~ 159 (183)
. .+ .+|+.++...
T Consensus 362 alkaa~lA~~~G~~vmvsH 380 (441)
T 3qtp_A 362 TFKTIKMAQEKGWGVMASH 380 (441)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCeEEEeC
Confidence 1 22 8899877543
No 56
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=64.09 E-value=6.4 Score=22.94 Aligned_cols=21 Identities=24% Similarity=0.238 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHHHHHcCCccE
Q 044886 91 VPIEVTIGELKRLVEEGKIKH 111 (183)
Q Consensus 91 ~~~~~~~~~l~~l~~~G~ir~ 111 (183)
..-++++++|.+|.++|+|+-
T Consensus 37 V~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 37 VEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CCHHHHHHHHHHHHHTTSEEE
T ss_pred CCHHHHHHHHHHHHHCCCeec
Confidence 346789999999999999973
No 57
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=63.31 E-value=54 Score=25.93 Aligned_cols=142 Identities=12% Similarity=0.071 Sum_probs=80.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCC-chHHHHHHHHhhC-CC-C------CCCCCHHHHH-HHHHHHHHHcCCCCc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKVIYED-GK-Y------SYCGDPAYLR-AACEASLKRLDVDCI 79 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~~g~~l~~~-~k-~------~~~~~~~~i~-~~~~~sL~~lg~~~i 79 (183)
+.++..+..+.+.+.|++.|..-- |.. ......-+++++. +. . ....+.+... +-+ +.|+.++++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~-~~l~~~~i~-- 215 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKV--GTNVKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTAL-RSLGHLNID-- 215 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEC--CSCHHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHH-HTSTTSCCS--
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEe--CCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH-HHHHhCCCc--
Confidence 567788888889999999988421 111 1112223344431 11 1 1122333332 222 224444443
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
++..|-+. +-++.+.++++.-.|--.+-- -++...++++++....+++|+..+..-.- ... .+ .+|
T Consensus 216 ---~iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 288 (369)
T 2p8b_A 216 ---WIEQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAG 288 (369)
T ss_dssp ---CEECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTT
T ss_pred ---EEECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcC
Confidence 34454322 237778888887655444333 36889999999988899999977654211 111 22 889
Q ss_pred CeEEEeccCCc
Q 044886 153 IGIVAYNLLEC 163 (183)
Q Consensus 153 i~v~a~~~l~~ 163 (183)
+.++..+.+.+
T Consensus 289 ~~~~~~~~~es 299 (369)
T 2p8b_A 289 IECQVGSMVES 299 (369)
T ss_dssp CEEEECCSSCC
T ss_pred CcEEecCCCcc
Confidence 99888776543
No 58
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=63.19 E-value=65 Score=26.79 Aligned_cols=146 Identities=14% Similarity=0.132 Sum_probs=86.1
Q ss_pred CCCCCCC-CHHHHHHHHHHHHH-cCCC-----eEeCcC--CC--CCCchHHHHHHHHhhCC-CCCCCCCHHHHHHHHHHH
Q 044886 3 AFYGPSK-PESGMIALTNHAID-SGIN-----VLDTSD--VY--GPHTNEILLGKVIYEDG-KYSYCGDPAYLRAACEAS 70 (183)
Q Consensus 3 ~~~g~~~-~~~~~~~~l~~A~~-~Gi~-----~~DtA~--~Y--g~g~sE~~~g~~l~~~~-k~~~~~~~~~i~~~~~~s 70 (183)
|.|-++. +.+++.++|..|++ +|++ -+|+|. +| ..|.-+ +. ++... .-....+++++.+-.++.
T Consensus 218 Ggfap~~~~~~eaL~ll~~Ai~~aGy~~~i~i~lD~Aasefy~~~~g~Y~--l~--fk~~~~~~~~~~t~~Elid~y~~l 293 (452)
T 3otr_A 218 GGFAPNVATAEEALNLLVEAIKAAGYEGKIKIAFDAAASEFYKQDEKKYD--LD--YKCKTKNASKHLTGEKLKEVYEGW 293 (452)
T ss_dssp SCBCCCCCSHHHHHHHHHHHHHHHTCTTTSEEEEECCGGGGEETTTTEEE--TT--TTCSSCCGGGEECHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHcCCCceEEEccccchHhheeccCCeEE--ee--ccCCCCcccccccHHHHHHHHHHH
Confidence 3443345 56899999999997 5886 267763 45 211100 00 00000 001235788887777777
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEE--ecCcCHHHHHHHhhcCCeeEEeeecCcccCCcHH-
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID--LSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKE- 147 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG--~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~- 147 (183)
+++. ++++|-.|-+..+++ .|..|.+... .+|--+| ++..++..++++++....+++++..|-+-.--+.
T Consensus 294 le~y-----pIv~IEDPl~~dD~e-g~a~Lt~~lg-~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQIGgITEal 366 (452)
T 3otr_A 294 LKKY-----PIISVEDPFDQDDFA-SFSAFTKDVG-EKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQIGSVTEAI 366 (452)
T ss_dssp HHHS-----CEEEEECCSCTTCHH-HHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCCHHHHH
T ss_pred Hhhh-----CceEEecCCChhhHH-HHHHHHHhhC-CCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccccccHHHHH
Confidence 7764 378888886655533 2333333221 2465566 3345799999999998889999988754322111
Q ss_pred ---HH--hcCCeEEEec
Q 044886 148 ---EM--ELGIGIVAYN 159 (183)
Q Consensus 148 ---~~--~~~i~v~a~~ 159 (183)
.+ ++|+.++...
T Consensus 367 ka~~lA~~~G~~vmvsh 383 (452)
T 3otr_A 367 EACLLAQKSGWGVQVSH 383 (452)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCeEEEeC
Confidence 22 8899877654
No 59
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=62.01 E-value=9.5 Score=29.55 Aligned_cols=52 Identities=21% Similarity=0.075 Sum_probs=37.9
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCCCC-----CCHHHHHHHHHHHHH-cCCccEEEec
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRIDTK-----VPIEVTIGELKRLVE-EGKIKHIDLS 115 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~~~-----~~~~~~~~~l~~l~~-~G~ir~iG~s 115 (183)
+++|.+.|+.||+..=|.+++|.--.. ...+.++++|.+++- +|.+--=.++
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtft 72 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQS 72 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 566788889999999999999985221 235678999998774 6765544433
No 60
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=61.87 E-value=37 Score=23.62 Aligned_cols=82 Identities=10% Similarity=-0.031 Sum_probs=61.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc--CCccEEEecCcCHHHHHHHhhcCCeeEE
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE--GKIKHIDLSEAFASTIRRAHTIHPITVV 134 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iG~s~~~~~~l~~~~~~~~~~~~ 134 (183)
..+.+.+.+.+.+.-+.+|++ ++++| +..--+.++.+.+...+ |.|-.=|--+++.-.++.++.....-++
T Consensus 26 ~~tl~di~~~l~~~a~~~g~~-~~~~Q------SN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~V 98 (146)
T 1h05_A 26 GTTHDELVALIEREAAELGLK-AVVRQ------SDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 98 (146)
T ss_dssp CCCHHHHHHHHHHHHHHTTCE-EEEEE------CSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEE
T ss_pred cCCHHHHHHHHHHHHHHcCCE-EEEEe------eCCHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEE
Confidence 567899999999999999985 88877 22334678888888654 4444445556777888888888777899
Q ss_pred eeecCcccCCc
Q 044886 135 RLEWSLRSRDV 145 (183)
Q Consensus 135 q~~~~~~~~~~ 145 (183)
.+..|-+..+.
T Consensus 99 EVHiSNi~aRE 109 (146)
T 1h05_A 99 EVHISNVHARE 109 (146)
T ss_dssp EEESSCGGGSC
T ss_pred EEEecCccccc
Confidence 99998776553
No 61
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=61.69 E-value=14 Score=28.80 Aligned_cols=53 Identities=19% Similarity=0.144 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHcCCCCcceEEeccCCCCC-----CHHHHHHHHHHHH-HcCCccEEEec
Q 044886 63 LRAACEASLKRLDVDCIDLYDQHRIDTKV-----PIEVTIGELKRLV-EEGKIKHIDLS 115 (183)
Q Consensus 63 i~~~~~~sL~~lg~~~iDl~~lh~~~~~~-----~~~~~~~~l~~l~-~~G~ir~iG~s 115 (183)
-+++|.+.|+.||+..=|.+++|.--... ..+.++++|.++. ++|.+----+|
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 46788889999999999999999864332 2567899998888 47876655544
No 62
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=57.98 E-value=25 Score=25.24 Aligned_cols=82 Identities=13% Similarity=0.109 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHH--HcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCcCHHHHHHHhhcCCe
Q 044886 57 CGDPAYLRAACEASLK--RLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEAFASTIRRAHTIHPI 131 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~--~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~~~~~l~~~~~~~~~ 131 (183)
..+.+.|.+.+.+.-. .+|++ +++++ +..--++++.+.+.... |.|-.=|--+|+.-.++.++.....
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~~-l~~~Q------SN~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~ 105 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDVE-LEFFQ------TNFEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGK 105 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCEE-EEEEE------CSCHHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSS
T ss_pred cCCHHHHHHHHHHHhccccCCCE-EEEEe------eCcHHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCC
Confidence 6688999999999999 99874 77776 22345788888888654 3333334445677778888888777
Q ss_pred eEEeeecCcccCCc
Q 044886 132 TVVRLEWSLRSRDV 145 (183)
Q Consensus 132 ~~~q~~~~~~~~~~ 145 (183)
-++.+..|-+..+.
T Consensus 106 P~VEVHiSNi~aRE 119 (176)
T 2c4w_A 106 PVIEVHLTNIQARE 119 (176)
T ss_dssp CEEEEESSCGGGSC
T ss_pred CEEEEEecCccccc
Confidence 89999998766543
No 63
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=56.98 E-value=75 Score=25.51 Aligned_cols=143 Identities=8% Similarity=-0.026 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcC-C---CCC---------C---c--hHHHHHHHHhh-CCC-C------CCCCCHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSD-V---YGP---------H---T--NEILLGKVIYE-DGK-Y------SYCGDPAY 62 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~-~---Yg~---------g---~--sE~~~g~~l~~-~~k-~------~~~~~~~~ 62 (183)
.+.++..+..+.+.+.|++.|..-. + +|. . + .....-+++++ .+. . ....+.+.
T Consensus 151 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~ 230 (407)
T 2o56_A 151 TEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDTTS 230 (407)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 3678888888999999999877421 1 121 0 0 11122233333 121 1 12345666
Q ss_pred HHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcc
Q 044886 63 LRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLR 141 (183)
Q Consensus 63 i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~ 141 (183)
..+-++ .|+.+++++ +..|-+. +.++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+-+
T Consensus 231 a~~~~~-~l~~~~i~~-----iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 300 (407)
T 2o56_A 231 AIQFGR-MIEELGIFY-----YEEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTC 300 (407)
T ss_dssp HHHHHH-HHGGGCCSC-----EECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTT
T ss_pred HHHHHH-HHHhcCCCE-----EeCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 555444 377776554 3344322 2367777887775555444333 5678899999888899999987654
Q ss_pred cCC-cHH---HH--hcCCeEEEeccC
Q 044886 142 SRD-VKE---EM--ELGIGIVAYNLL 161 (183)
Q Consensus 142 ~~~-~~~---~~--~~~i~v~a~~~l 161 (183)
-.- ... .+ .+|+.++..+..
T Consensus 301 GGite~~~i~~~A~~~g~~~~~h~~~ 326 (407)
T 2o56_A 301 GGITEVKKICDMAHVYDKTVQIHVCG 326 (407)
T ss_dssp THHHHHHHHHHHHHTTTCEECCCCCS
T ss_pred CCHHHHHHHHHHHHHcCCeEeecCCC
Confidence 211 111 22 778887776653
No 64
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=56.48 E-value=53 Score=26.02 Aligned_cols=141 Identities=11% Similarity=-0.044 Sum_probs=82.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHc-CCCCcc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRL-DVDCID 80 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~l-g~~~iD 80 (183)
+.++..+..+.+.+.|++.|..--. +.-......-+++++. +. . ....+.+... +.++.| . ..+
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~----~~~~~l~~--~~~ 218 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANGKLSVETAL----RLLRLLPH--GLD 218 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTTBCCHHHHH----HHHHHSCT--TCC
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCCCcCHHHHH----HHHHHHHh--hcC
Confidence 5677888888899999999874210 1001122233444442 21 1 1123443322 233444 2 134
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i 153 (183)
+ ++..|-. .++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+..-.- ... .+ .+|+
T Consensus 219 i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~ 291 (371)
T 2ps2_A 219 F-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGY 291 (371)
T ss_dssp C-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTC
T ss_pred C-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCC
Confidence 4 5555532 477888888776555444333 6889999999998899999987654211 111 23 8899
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 292 ~~~~~~~~es~ 302 (371)
T 2ps2_A 292 SVSVQETCGSD 302 (371)
T ss_dssp EEEEECSSCCH
T ss_pred eEEecCCCcCH
Confidence 99988776554
No 65
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=56.40 E-value=35 Score=23.71 Aligned_cols=80 Identities=14% Similarity=0.102 Sum_probs=59.7
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec----CcCHHHHHHHhhcCCee
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS----EAFASTIRRAHTIHPIT 132 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s----~~~~~~l~~~~~~~~~~ 132 (183)
..+.+.+.+.+.+.-+.+|++ ++++| +..--+.++.+.+... .+..|=+. +++.-.++.++.....-
T Consensus 24 ~~tl~di~~~l~~~a~~~g~~-~~~~Q------SN~EgeLid~Ih~a~~--~~dgiiiNpgA~THtSvAlrDAl~~v~~P 94 (143)
T 1gqo_A 24 RQTLTDIETDLFQFAEALHIQ-LTFFQ------SNHEGDLIDAIHEAEE--QYSGIVLNPGALSHYSYAIRDAVSSISLP 94 (143)
T ss_dssp SCCHHHHHHHHHHHHHHHTCE-EEEEE------CSCHHHHHHHHHHHTT--TCSEEEEECGGGGGTCHHHHHHHHTSCSC
T ss_pred cCCHHHHHHHHHHHHHHcCCE-EEEEe------eCCHHHHHHHHHHhhh--cCcEEEEccchhccccHHHHHHHHhCCCC
Confidence 568899999999999999985 88887 2234567888888853 35555444 56677788888887778
Q ss_pred EEeeecCcccCCc
Q 044886 133 VVRLEWSLRSRDV 145 (183)
Q Consensus 133 ~~q~~~~~~~~~~ 145 (183)
++.+..|-...+.
T Consensus 95 ~VEVHiSNi~aRE 107 (143)
T 1gqo_A 95 VVEVHLSNLYARE 107 (143)
T ss_dssp EEEEESSCGGGSC
T ss_pred EEEEEecCccccc
Confidence 9999998776553
No 66
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=50.90 E-value=92 Score=24.76 Aligned_cols=143 Identities=8% Similarity=0.013 Sum_probs=86.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCC-chHHHHHHHHhhC-CCC------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKVIYED-GKY------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~~g~~l~~~-~k~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+..+.+.+.|++.|..- .|.. .....+-+++++. +.. ....+.+...+ +-+.|+..+++++
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~-~~~~l~~~~i~~i-- 221 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLK--VGRGEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAIN-MCRKLEKYDIEFI-- 221 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEE--CCSCHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHH-HHHHHGGGCCSEE--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEC--cCCCHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHH-HHHHHHhcCCCEE--
Confidence 56778888889999999998852 1210 1122233444442 211 12345555444 3346777776543
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccC-CcHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSR-DVKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~---~~--~~~i~ 154 (183)
..|-+. +-++.+.++++.-.|--++--+ ++++.++++++....+++|+..+.+-. .... .+ .+|+.
T Consensus 222 ---EqP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 294 (384)
T 2pgw_A 222 ---EQPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLK 294 (384)
T ss_dssp ---ECCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCC
T ss_pred ---eCCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCe
Confidence 344322 2377778888776665554443 678999999999889999997765422 1111 22 88998
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
++..+.+.++
T Consensus 295 ~~~~~~~es~ 304 (384)
T 2pgw_A 295 ICIHSSFTTG 304 (384)
T ss_dssp EEECCCSCCH
T ss_pred EeeccCcCCH
Confidence 8888755443
No 67
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=50.51 E-value=29 Score=28.09 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=78.5
Q ss_pred CCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHH---HHHH---hhCC-CCCCCCCHHHHHHHHHHHHHHcCCC
Q 044886 5 YGPSKPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILL---GKVI---YEDG-KYSYCGDPAYLRAACEASLKRLDVD 77 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~---g~~l---~~~~-k~~~~~~~~~i~~~~~~sL~~lg~~ 77 (183)
|......++..+.++.|.+.|++.+-|+=+-..+..+..+ .+.+ ++.+ +...+.+|+ +|+.||.+
T Consensus 10 Y~~~~~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~--------~l~~Lg~s 81 (372)
T 2p0o_A 10 FLGEEITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGE--------ALKRAGFS 81 (372)
T ss_dssp CTTSCCCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHH--------HHHTTTCB
T ss_pred cCCCCCHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHH--------HHHHcCCC
Confidence 4443456677799999999999999999776533333222 2222 2211 233466665 45566666
Q ss_pred CcceEEeccC-------CCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCC-eeEEeeecCcccCCcHH--
Q 044886 78 CIDLYDQHRI-------DTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHP-ITVVRLEWSLRSRDVKE-- 147 (183)
Q Consensus 78 ~iDl~~lh~~-------~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~-~~~~q~~~~~~~~~~~~-- 147 (183)
|=|+-.++.. |...+.++. .+|-.. .-=.+=.|+.+.+.+..+++..+ +.-+.. +|-+.+++..
T Consensus 82 ~~dl~~~~~lGi~glRLD~Gf~~~ei----a~ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a-~HNFYPr~~TGL 155 (372)
T 2p0o_A 82 FDELEPLIELGVTGLRMDYGITIEQM----AHASHK-IDIGLNASTITLEEVAELKAHQADFSRLEA-WHNYYPRPETGI 155 (372)
T ss_dssp TTBCHHHHHHTCCEEEECSSCCHHHH----HHHHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEE-ECCCCCSTTCSB
T ss_pred HHHHHHHHHcCCCEEEEcCCCCHHHH----HHHhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEE-eeccCCCCCCCC
Confidence 6555555432 333333332 233222 32344445667888988887742 333322 3333444322
Q ss_pred --HH---------hcCCeEEEeccCCc
Q 044886 148 --EM---------ELGIGIVAYNLLEC 163 (183)
Q Consensus 148 --~~---------~~~i~v~a~~~l~~ 163 (183)
++ +.|+.+.|+-|=..
T Consensus 156 s~~~f~~~n~~~k~~Gi~t~AFI~g~~ 182 (372)
T 2p0o_A 156 GTTFFNEKNRWLKELGLQVFTFVPGDG 182 (372)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CHHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 21 88999999877643
No 68
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=49.59 E-value=42 Score=27.86 Aligned_cols=63 Identities=8% Similarity=0.016 Sum_probs=42.5
Q ss_pred HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeec
Q 044886 72 KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 72 ~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~ 138 (183)
..+|.||+=+++.-.-....+.+.+ .++.+...+..+||- |-+.+.+.++.+..+++++|++=
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a----~~i~~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG 335 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQA----QEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHG 335 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHH----HHHHHHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHH----HHHHhcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECC
Confidence 3558888877753222222333332 233333689999998 56789999999988999999974
No 69
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=46.91 E-value=1.1e+02 Score=24.32 Aligned_cols=144 Identities=12% Similarity=0.029 Sum_probs=84.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+.++.+++.|++.|-.--... ...+...-+++++. +. .....+.+... .+-+.|+.++++++
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~-~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~-~~~~~l~~~~i~~i-- 215 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGS-KELDVERIRMIREAAGDSITLRIDANQGWSVETAI-ETLTLLEPYNIQHC-- 215 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHH-HHHHHHGGGCCSCE--
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCC-HHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHH-HHHHHHhhcCCCEE--
Confidence 577888888899999999876432111 11333344455532 11 11233444432 23445566665444
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHI-DLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-G~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~ 154 (183)
..|-+ . +-++.+.+++++-.|--. |=+-++...++++++....+++|+..+..--- ... .+ .+|+.
T Consensus 216 ---EqP~~---~-~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~ 288 (368)
T 3q45_A 216 ---EEPVS---R-NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMP 288 (368)
T ss_dssp ---ECCBC---G-GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCC
T ss_pred ---ECCCC---h-hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCc
Confidence 34422 1 236677778876555422 22347899999999988899999987754321 111 22 89999
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
++..+.+.++
T Consensus 289 ~~~~~~~es~ 298 (368)
T 3q45_A 289 VQVGGFLESR 298 (368)
T ss_dssp EEECCSSCCH
T ss_pred EEecCccccH
Confidence 9887776554
No 70
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=46.76 E-value=49 Score=23.31 Aligned_cols=80 Identities=13% Similarity=0.015 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec----CcCHHHHHHHhhcCC-e
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS----EAFASTIRRAHTIHP-I 131 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s----~~~~~~l~~~~~~~~-~ 131 (183)
..+.+.+.+.+.+.-..+|++ ++++| +..--+.++.+.+...+ +..|=+. +++.-.++.++.... .
T Consensus 30 ~~Tl~di~~~l~~~a~~~g~~-v~~~Q------SN~EGeLId~Ih~a~~~--~dgiIINpgA~THtSvAlrDAl~~v~~~ 100 (156)
T 1gtz_A 30 SDTLADVEALCVKAAAAHGGT-VDFRQ------SNHEGELVDWIHEARLN--HCGIVINPAAYSHTSVAILDALNTCDGL 100 (156)
T ss_dssp SCCHHHHHHHHHHHHHTTTCC-EEEEE------CSCHHHHHHHHHHHHHH--CSEEEEECTTHHHHCHHHHHHHHTSTTC
T ss_pred CCCHHHHHHHHHHHHHHcCCE-EEEEe------eCCHHHHHHHHHHhhhc--CcEEEECchhhccccHHHHHHHHhcCCC
Confidence 567899999999999999985 88887 22345678888888754 4455444 344556777777766 7
Q ss_pred eEEeeecCcccCCc
Q 044886 132 TVVRLEWSLRSRDV 145 (183)
Q Consensus 132 ~~~q~~~~~~~~~~ 145 (183)
-++.+..|-+..+.
T Consensus 101 P~VEVHiSNi~aRE 114 (156)
T 1gtz_A 101 PVVEVHISNIHQRE 114 (156)
T ss_dssp CEEEEESSCGGGSC
T ss_pred CEEEEEecCccccc
Confidence 89999998776553
No 71
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=45.97 E-value=94 Score=23.46 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=20.8
Q ss_pred CCHHHHHHHHHHHHHcC-CCeEeCcCCCC
Q 044886 9 KPESGMIALTNHAIDSG-INVLDTSDVYG 36 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~G-i~~~DtA~~Yg 36 (183)
.++++-.++++.|++.| +.++|.=-..+
T Consensus 97 ~~~~~~~~ll~~~~~~g~~d~iDvEl~~~ 125 (257)
T 2yr1_A 97 LNEAEVRRLIEAICRSGAIDLVDYELAYG 125 (257)
T ss_dssp SCHHHHHHHHHHHHHHTCCSEEEEEGGGT
T ss_pred CCHHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 47778888888888888 78888654333
No 72
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=45.04 E-value=1.2e+02 Score=24.28 Aligned_cols=144 Identities=4% Similarity=-0.063 Sum_probs=84.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+..+.+.+.|++.|..--.-.. ......-+++++. +. . ....+.+...+- -+.|+.+++++
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~-~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~-~~~l~~~~i~~--- 219 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPL-KADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTT-IRALEKYNLSK--- 219 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCH-HHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH-HHHHGGGCCSC---
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCH-HHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHH-HHHHHhCCCCE---
Confidence 5677788888899999998774211000 1122222444432 21 1 123455555443 33577776654
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~ 154 (183)
+..|-+. +.++.+.++++.-.|--.+-- .++...++++++....+++|+..+..-.- ... .+ .+|+.
T Consensus 220 --iEqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 293 (397)
T 2qde_A 220 --IEQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLP 293 (397)
T ss_dssp --EECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCC
T ss_pred --EECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCe
Confidence 3444322 237777888876555433332 36788999999988899999977653211 111 23 88999
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
++..+-+.+|
T Consensus 294 ~~~~~~~es~ 303 (397)
T 2qde_A 294 VICGCMVGSG 303 (397)
T ss_dssp EEECCCSCCH
T ss_pred EEEecCcccH
Confidence 8888655443
No 73
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=44.84 E-value=10 Score=31.85 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHcCCCeEeCcC
Q 044886 13 GMIALTNHAIDSGINVLDTSD 33 (183)
Q Consensus 13 ~~~~~l~~A~~~Gi~~~DtA~ 33 (183)
+...+++.|+++|++++|||.
T Consensus 95 ~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 95 SSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp CHHHHHHHHHHHTCEEEESSC
T ss_pred cCHHHHHHHHHcCCCEEECCC
Confidence 456899999999999999994
No 74
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=44.83 E-value=1.2e+02 Score=24.20 Aligned_cols=142 Identities=12% Similarity=0.053 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh-CCC-C------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE-DGK-Y------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~-~~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+..+.+.+.|++.|..--.-..-.. ..+-+++++ .+. . ....+.+...+-++ .|+..+++++
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~-~l~~~~i~~i-- 239 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIA-EMQPFDPWFA-- 239 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHH-HHGGGCCSCE--
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHH-HHhhcCCCEE--
Confidence 6778888889999999999874211000012 233344443 221 1 12345665554444 4777776644
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCCcHH--H---H--hcCC
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRDVKE--E---M--ELGI 153 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~--~---~--~~~i 153 (183)
..|-+. +.++.+.++++.-.|--++--+ ++.+.++++++....+++|+..+. - .... . + ++|+
T Consensus 240 ---EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-G-Git~~~~i~~~A~~~g~ 310 (388)
T 2nql_A 240 ---EAPVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-K-GITNFIRIGALAAEHGI 310 (388)
T ss_dssp ---ECCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-H-CHHHHHHHHHHHHHHTC
T ss_pred ---ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-C-CHHHHHHHHHHHHHcCC
Confidence 344221 2377888888876665444443 678999999999889999997665 2 2222 2 2 8899
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 311 ~~~~h~~~es~ 321 (388)
T 2nql_A 311 DVIPHATVGAG 321 (388)
T ss_dssp EECCCCCSSCS
T ss_pred eEEeecCCCcH
Confidence 98887555444
No 75
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=42.65 E-value=1.3e+02 Score=24.16 Aligned_cols=140 Identities=9% Similarity=-0.036 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcceE
Q 044886 11 ESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCIDLY 82 (183)
Q Consensus 11 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iDl~ 82 (183)
.++..+.++.+++.|++.|..-- +.+..... -+++++. +. .....+.+. . .+-+.|+.+++.++
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~-v~avR~a~G~~~~L~vDaN~~w~~~~-~-~~~~~l~~~~i~~i--- 235 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEP-LQETRRAVGDHFPLWTDANSSFELDQ-W-ETFKAMDAAKCLFH--- 235 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHH-HHHHHHHHCTTSCEEEECTTCCCGGG-H-HHHHHHGGGCCSCE---
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHH-HHHHHHhcCCCCEEEEeCCCCCCHHH-H-HHHHHHHhcCCCEE---
Confidence 78888899999999999876432 11122222 3444431 11 112234444 2 34456776665443
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCeE
Q 044886 83 DQHRIDTKVPIEVTIGELKRLVEEGKIK-HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIGI 155 (183)
Q Consensus 83 ~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~v 155 (183)
..|-+.. .++.+.++++.-.|- ..|=+-++...++++++....+++|+..+..--- ... .+ .+|+.+
T Consensus 236 --EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 309 (400)
T 3mwc_A 236 --EQPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIKIYKIATDNGIKL 309 (400)
T ss_dssp --ESCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEE
T ss_pred --eCCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHHHHHHHHHcCCEE
Confidence 4553322 367777888765554 3333447889999999998899999977654211 111 22 899999
Q ss_pred EEeccCCcc
Q 044886 156 VAYNLLECE 164 (183)
Q Consensus 156 ~a~~~l~~G 164 (183)
+..+.+.++
T Consensus 310 ~~~~~~es~ 318 (400)
T 3mwc_A 310 WGGTMPESG 318 (400)
T ss_dssp EECCSCCCH
T ss_pred EecCCCCCH
Confidence 887655443
No 76
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=42.05 E-value=92 Score=22.23 Aligned_cols=82 Identities=11% Similarity=-0.016 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHH--cCCccEEEecCcCHHHHHHHhhcCCeeEE
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVE--EGKIKHIDLSEAFASTIRRAHTIHPITVV 134 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~--~G~ir~iG~s~~~~~~l~~~~~~~~~~~~ 134 (183)
..+.+.|.+.+.+.-.++|++ ++++| +..--+.++.+.+... +|.|-.=|--++..-.++.++....+-++
T Consensus 52 ~~TL~dI~~~l~~~a~~~G~~-l~~~Q------SN~EGeLId~Ih~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P~V 124 (172)
T 3n8k_A 52 GTTHDELVALIEREAAELGLK-AVVRQ------SDSEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 124 (172)
T ss_dssp SCCHHHHHHHHHHHHHHTTCE-EEEEE------CSCHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCE-EEEEe------cCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCCEE
Confidence 568899999999999999975 78877 2223467788877754 23333334445666777888877777799
Q ss_pred eeecCcccCCc
Q 044886 135 RLEWSLRSRDV 145 (183)
Q Consensus 135 q~~~~~~~~~~ 145 (183)
.+..|-+..+.
T Consensus 125 EVHiSNihaRE 135 (172)
T 3n8k_A 125 EVHISNVHARE 135 (172)
T ss_dssp EEESSCTTSSC
T ss_pred EEEcCCchhcc
Confidence 99998776553
No 77
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=40.14 E-value=36 Score=27.20 Aligned_cols=141 Identities=11% Similarity=0.061 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCC-CCCC-chHHHHHHHHhhC-CC-C------CCCCC-HHHHHHHHHHHHHHcCCCC
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDV-YGPH-TNEILLGKVIYED-GK-Y------SYCGD-PAYLRAACEASLKRLDVDC 78 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~-Yg~g-~sE~~~g~~l~~~-~k-~------~~~~~-~~~i~~~~~~sL~~lg~~~ 78 (183)
+.++..+..+.+.+.|++.|..--. +|.. ......-+++|+. +. . ....+ .+...+ +-+.|+.+++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~-~~~~l~~~~i-- 222 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMGDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAM-MAKRLEEFNL-- 222 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTTSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHH-HHHHSGGGCC--
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHH-HHHHhhhcCc--
Confidence 3477888889999999999874321 2110 1223333445542 21 1 11233 433222 2334455554
Q ss_pred cceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCcCHHHHHHHhhcCCeeEEeeecCcccC--CcHH--HH--hc
Q 044886 79 IDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDL-SEAFASTIRRAHTIHPITVVRLEWSLRSR--DVKE--EM--EL 151 (183)
Q Consensus 79 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~--~~~~--~~--~~ 151 (183)
.++..|-+.. .++.+.++++.-.|--.+- +-++...++++++....+++|+..+..-- +... .+ .+
T Consensus 223 ---~~iEqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~ 295 (374)
T 3sjn_A 223 ---NWIEEPVLAD----SLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMN 295 (374)
T ss_dssp ---SEEECSSCTT----CHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHH
T ss_pred ---eEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 3445553322 3677788888755543322 33678889999988888999998775431 1111 22 78
Q ss_pred CCeEEEecc
Q 044886 152 GIGIVAYNL 160 (183)
Q Consensus 152 ~i~v~a~~~ 160 (183)
|+.++..+.
T Consensus 296 gi~~~~h~~ 304 (374)
T 3sjn_A 296 GTQLIPHGF 304 (374)
T ss_dssp TCEECCBCC
T ss_pred CCEEEecCC
Confidence 888877765
No 78
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=39.51 E-value=1.4e+02 Score=23.74 Aligned_cols=143 Identities=11% Similarity=0.003 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCC----CCC---------C---c--hHHHHHHHHhh-CCC-C------CCCCCHHH
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDV----YGP---------H---T--NEILLGKVIYE-DGK-Y------SYCGDPAY 62 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~---------g---~--sE~~~g~~l~~-~~k-~------~~~~~~~~ 62 (183)
.+.++..+..+.+.+.|++.|..-.. +|. . + .....-+++++ .+. . ....+.+.
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~~~ 224 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDLVS 224 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHH
Confidence 36788888889999999998874311 121 0 0 01122233333 121 1 12345555
Q ss_pred HHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcc
Q 044886 63 LRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLR 141 (183)
Q Consensus 63 i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~ 141 (183)
..+-++ .|+.++ +.++..|-+. +-++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+-.
T Consensus 225 ai~~~~-~l~~~~-----i~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 294 (403)
T 2ox4_A 225 AIQFAK-AIEEFN-----IFFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTC 294 (403)
T ss_dssp HHHHHH-HHGGGC-----EEEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHH
T ss_pred HHHHHH-HHHhhC-----CCEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCcccc
Confidence 444433 355544 4455555332 2367778888776665444433 5678899999888889999876643
Q ss_pred cCC-cHH---HH--hcCCeEEEeccC
Q 044886 142 SRD-VKE---EM--ELGIGIVAYNLL 161 (183)
Q Consensus 142 ~~~-~~~---~~--~~~i~v~a~~~l 161 (183)
-.- ... .+ .+|+.++..+..
T Consensus 295 GGite~~~i~~~A~~~g~~~~~h~~~ 320 (403)
T 2ox4_A 295 GGFTEFKKIADMAHIFEVTVQAHVAG 320 (403)
T ss_dssp THHHHHHHHHHHHHHTTCEECCCCCS
T ss_pred CCHHHHHHHHHHHHHcCCEEeecCCC
Confidence 211 111 22 778888776653
No 79
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=38.90 E-value=1.1e+02 Score=23.23 Aligned_cols=78 Identities=9% Similarity=-0.075 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeee
Q 044886 58 GDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLE 137 (183)
Q Consensus 58 ~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~ 137 (183)
.+.+. ...+-+.|.++|+++|.+-....+.....+.+.++.++.+.+...++...+. -+...++++++.. ++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~G-~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAAH-ADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHTT-CSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHCC-CCEEEEE
Confidence 44443 4556667788998888886544332111123556777777665566666665 4567788877763 4566665
Q ss_pred c
Q 044886 138 W 138 (183)
Q Consensus 138 ~ 138 (183)
.
T Consensus 100 ~ 100 (295)
T 1ydn_A 100 I 100 (295)
T ss_dssp E
T ss_pred E
Confidence 3
No 80
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=38.85 E-value=1.4e+02 Score=23.53 Aligned_cols=138 Identities=11% Similarity=-0.023 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCc--hHHHHHHHHhhC-CC-CC------CCCCHHHHHHHHHHHHHHcCCCCc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHT--NEILLGKVIYED-GK-YS------YCGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~--sE~~~g~~l~~~-~k-~~------~~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
+.++..+..+.+.+.|++.|..- -|.+. .....-+++++. +. .. ...+.+. ..+.++.|. .
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik--~g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~----a~~~~~~l~---~ 215 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAK--IGGSDPAQDIARIEAISAGLPDGHRVTFDVNRAWTPAI----AVEVLNSVR---A 215 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEE--CCSSCHHHHHHHHHHHHHSCCTTCEEEEECTTCCCHHH----HHHHHTSCC---C
T ss_pred CHHHHHHHHHHHHHHhhhheeec--CCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHH----HHHHHHHhC---C
Confidence 56778888888999999998852 12211 222333445542 21 11 1223322 223344443 4
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
++ ++-.|-+ .++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+..-.- ... .+ .+|
T Consensus 216 ~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g 288 (378)
T 2qdd_A 216 RD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVG 288 (378)
T ss_dssp CC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHT
T ss_pred Cc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcC
Confidence 55 5655532 478888888776555444333 6788999999988899999977654211 111 22 889
Q ss_pred CeEEEeccCCc
Q 044886 153 IGIVAYNLLEC 163 (183)
Q Consensus 153 i~v~a~~~l~~ 163 (183)
+.++..+.+.+
T Consensus 289 ~~~~~~~~~es 299 (378)
T 2qdd_A 289 WQMHIEDVGGT 299 (378)
T ss_dssp CEEEECCSSCC
T ss_pred CeEEecCCCCc
Confidence 98888865544
No 81
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=38.00 E-value=1.5e+02 Score=23.43 Aligned_cols=144 Identities=16% Similarity=0.122 Sum_probs=83.3
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 10 PESGMIALTNHAIDS-GINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
+.++..+.++.+++. |++.|-.--.......+...-+++++. +. .....+.+...+ +-+.|+.++
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~-~~~~l~~~~----- 212 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLR-AMREMADLD----- 212 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHH-HHHHTTTSC-----
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHH-HHHHHHHhC-----
Confidence 577888888899998 999876432111111333344555531 10 112234433221 223344444
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCcCHHHHHHHhhcCCeeEEeeecCcccCCcHH-HH-----hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHID-LSEAFASTIRRAHTIHPITVVRLEWSLRSRDVKE-EM-----ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~-~~-----~~~i 153 (183)
+.++..|-+.. .++.+.++++.-.|--.+ =+-++...++++++....+++|+..+-. --... .+ .+|+
T Consensus 213 i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~-Git~~~~ia~~A~~~gi 287 (367)
T 3dg3_A 213 LLFAEELCPAD----DVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART-GFTGSTRVHHLAEGLGL 287 (367)
T ss_dssp CSCEESCSCTT----SHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH-TTHHHHHHHHHHHHHTC
T ss_pred CCEEECCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh-hHHHHHHHHHHHHHcCC
Confidence 44455664322 266777888776554333 3347889999999998899999987765 22111 22 8899
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 288 ~~~~~~~~es~ 298 (367)
T 3dg3_A 288 DMVMGNQIDGQ 298 (367)
T ss_dssp EEEECCSSCCH
T ss_pred eEEECCcCCcH
Confidence 99887655544
No 82
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=37.83 E-value=1.4e+02 Score=23.11 Aligned_cols=27 Identities=11% Similarity=0.155 Sum_probs=24.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEeCc
Q 044886 6 GPSKPESGMIALTNHAIDSGINVLDTS 32 (183)
Q Consensus 6 g~~~~~~~~~~~l~~A~~~Gi~~~DtA 32 (183)
+..++.++..++++...+.|+..|+.+
T Consensus 22 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g 48 (307)
T 1ydo_A 22 PVWIATEDKITWINQLSRTGLSYIEIT 48 (307)
T ss_dssp SSCCCHHHHHHHHHHHHTTTCSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 455789999999999999999999986
No 83
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=37.30 E-value=51 Score=20.82 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=32.3
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHcC---CccEEEecCcCHHHHHHHhhcCCeeEEeeecC
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEEG---KIKHIDLSEAFASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
..+|++++...-+... .++.++++++.. .+.-+-++......+.++.+....+++.=+++
T Consensus 49 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~ 111 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD---GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFD 111 (132)
T ss_dssp TCCSEEEEESCBTTBC---HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCC
T ss_pred cCCCEEEEecCCCCCC---HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCC
Confidence 3478888876543333 344555555543 34445555555556666666654455544433
No 84
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=36.93 E-value=69 Score=20.58 Aligned_cols=49 Identities=16% Similarity=0.207 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCccEE----------EecC-cCHHHHHHHhhcCC-eeEEeeecCcccCCc
Q 044886 97 IGELKRLVEEGKIKHI----------DLSE-AFASTIRRAHTIHP-ITVVRLEWSLRSRDV 145 (183)
Q Consensus 97 ~~~l~~l~~~G~ir~i----------G~s~-~~~~~l~~~~~~~~-~~~~q~~~~~~~~~~ 145 (183)
.+...+|+++|+++++ ||-. -+.+.+.+++..-| +-.++++..++.+.+
T Consensus 28 ka~a~eLq~~G~~~~lWRv~G~y~nisIfdv~s~~eLh~iL~~LPLfpym~i~VtpL~~HP 88 (96)
T 1mli_A 28 KELAQRLQREGTWRHLWRIAGHYANYSVFDVPSVEALHDTLMQLPLFPYMDIEVDGLCRHP 88 (96)
T ss_pred HHHHHHHHhCCeeEEEEEecCCccEEEEEEcCCHHHHHHHHHhCCCCceEEEEEEEcccCC
Confidence 4677899999999665 3332 35678888887744 456677766665543
No 85
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=36.28 E-value=1.6e+02 Score=23.18 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCcCCCCCCc--hHHHHHHHHhhC-C-C------CCCCCCHHHHHHHHHHHHHHcCCCC
Q 044886 10 PESGMIALTNHAID-SGINVLDTSDVYGPHT--NEILLGKVIYED-G-K------YSYCGDPAYLRAACEASLKRLDVDC 78 (183)
Q Consensus 10 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~--sE~~~g~~l~~~-~-k------~~~~~~~~~i~~~~~~sL~~lg~~~ 78 (183)
+.++..+..+.+.+ .|++.|..-- |.+. .....-+++++. + . .....+.+...+- -+.|+.+++++
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~-~~~l~~~~i~~ 218 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIW-IPRLEEAGVEL 218 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHH-HHHHHHHTCCE
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHH-HHHHHhcCcce
Confidence 56777788888999 9999987431 2211 122233344431 1 1 1123455555443 34677777553
Q ss_pred cceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hc
Q 044886 79 IDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--EL 151 (183)
Q Consensus 79 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~ 151 (183)
+..|-+. +.++.+.++++.-.|--.+-- -++.+.++++++....+++|+..+..-.- ... .+ .+
T Consensus 219 -----iEqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~ 289 (370)
T 1nu5_A 219 -----VEQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAA 289 (370)
T ss_dssp -----EECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHH
T ss_pred -----EeCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHc
Confidence 4455322 236777888876555433322 36889999999998899999977653211 111 22 88
Q ss_pred CCeEEEeccCCcc
Q 044886 152 GIGIVAYNLLECE 164 (183)
Q Consensus 152 ~i~v~a~~~l~~G 164 (183)
|+.++..+.+.++
T Consensus 290 g~~~~~~~~~es~ 302 (370)
T 1nu5_A 290 GISSYGGTMLDST 302 (370)
T ss_dssp TCEEEECCSSCCH
T ss_pred CCcEEecCCcchH
Confidence 9999888766554
No 86
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=35.47 E-value=89 Score=22.20 Aligned_cols=80 Identities=10% Similarity=0.081 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHHHHH--HHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec----CcCHHHHHHHhhcCC
Q 044886 57 CGDPAYLRAACEASL--KRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS----EAFASTIRRAHTIHP 130 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL--~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s----~~~~~~l~~~~~~~~ 130 (183)
..+.+.+.+.+.+.- .++|++ ++++| +..--+.++.+.+... +.+..|=+. +++.-.++.++....
T Consensus 38 ~~TL~di~~~l~~~a~~~~~g~~-v~~~Q------SN~EGeLId~Ih~A~~-~~~dgIIINpgAyTHtSvAlrDAL~~v~ 109 (167)
T 3kip_A 38 TTSLSDIEQAAIEQAKLKNNDSE-VLVFQ------SNTEGFIIDRIHEAKR-QGVGFVVINAGAYTHTSVGIRDALLGTA 109 (167)
T ss_dssp SCCHHHHHHHHHHHHHHTCSSCE-EEEEE------CSCHHHHHHHHHHHHH-TTCCEEEEECGGGGGTCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHhccccCCcE-EEEEe------cCCHHHHHHHHHHhhh-cCccEEEEccccceeccHHHHHHHHhcC
Confidence 568899999999887 788875 77777 2234567888888752 345666555 455667777777767
Q ss_pred eeEEeeecCcccCC
Q 044886 131 ITVVRLEWSLRSRD 144 (183)
Q Consensus 131 ~~~~q~~~~~~~~~ 144 (183)
+-++.+..|-+..+
T Consensus 110 ~P~VEVHiSNihaR 123 (167)
T 3kip_A 110 IPFIEVHITNVHQR 123 (167)
T ss_dssp CCEEEEESSCGGGS
T ss_pred CCEEEEEcCCcccc
Confidence 77999998876655
No 87
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=35.25 E-value=1.5e+02 Score=22.67 Aligned_cols=27 Identities=19% Similarity=0.278 Sum_probs=24.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEeCc
Q 044886 6 GPSKPESGMIALTNHAIDSGINVLDTS 32 (183)
Q Consensus 6 g~~~~~~~~~~~l~~A~~~Gi~~~DtA 32 (183)
+..++.++..++++...+.|+..|+.+
T Consensus 21 ~~~~~~e~k~~i~~~L~~~Gv~~IE~g 47 (298)
T 2cw6_A 21 KNIVSTPVKIKLIDMLSEAGLSVIETT 47 (298)
T ss_dssp SSCCCHHHHHHHHHHHHHTTCSEECCE
T ss_pred CCCCCHHHHHHHHHHHHHcCcCEEEEC
Confidence 445789999999999999999999986
No 88
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=34.56 E-value=45 Score=25.19 Aligned_cols=29 Identities=14% Similarity=0.326 Sum_probs=24.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCC
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGP 37 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~ 37 (183)
.+.++...+.+.|.++|..|+.|+-.|+.
T Consensus 154 Lt~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 154 LTNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CCHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 46778888899999999999999988763
No 89
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=34.43 E-value=92 Score=19.98 Aligned_cols=63 Identities=8% Similarity=-0.044 Sum_probs=39.1
Q ss_pred HcCCCCcceEEeccCCCCCCHHHHHHHHHHHHH---cCCccEEEecCc-CHHHHHHHhhcCCeeEEeeec
Q 044886 73 RLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVE---EGKIKHIDLSEA-FASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 73 ~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~ 138 (183)
.+....+|++++....+.. ..++.+.++++ ...+.-|-++.. +.+...++.+....+++.-++
T Consensus 46 ~l~~~~~dlii~D~~l~~~---~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 46 QVQQAKYDLIILDIGLPIA---NGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp HHTTCCCSEEEECTTCGGG---CHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCT
T ss_pred HhhcCCCCEEEEeCCCCCC---CHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 3344568999886653322 34556666665 346778888874 566667777766556665555
No 90
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=33.72 E-value=1.8e+02 Score=23.06 Aligned_cols=145 Identities=10% Similarity=0.047 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-C---C----CCCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-G---K----YSYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~---k----~~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+.++.+++.|++.|-.--.-..-..+...-+++++. + . .....+.+... .+-+.|+.++++++
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~A~-~~~~~l~~~~i~~i-- 222 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQALTPFGAM-KILRDVDAFRPTFI-- 222 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTCCCTTTHH-HHHHHHHTTCCSCE--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHH-HHHHHHhhcCCCEE--
Confidence 566666777888889999876432111001233333445431 1 0 00112222222 23445555655443
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEE-EecCcCHHHHHHHhhcCCeeEEeeecCcccC-CcHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHI-DLSEAFASTIRRAHTIHPITVVRLEWSLRSR-DVKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-G~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~---~~--~~~i~ 154 (183)
..|-+.. -++.+.++++.-.|.-. |=+-++...++++++....+++|+..+..-- .... .+ .+|+.
T Consensus 223 ---EqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~gi~ 295 (377)
T 3my9_A 223 ---EQPVPRR----HLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSLMAIADTAGLP 295 (377)
T ss_dssp ---ECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHHHHHHHHHTCC
T ss_pred ---ECCCCcc----CHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCe
Confidence 3443222 26777788776544333 3334788999999998889999997665321 1111 22 88998
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
++..+.+.+|
T Consensus 296 ~~~~~~~es~ 305 (377)
T 3my9_A 296 GYGGTLWEGG 305 (377)
T ss_dssp EECCEECCSH
T ss_pred EecCCCCCcH
Confidence 8765544443
No 91
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=33.70 E-value=1.8e+02 Score=23.21 Aligned_cols=27 Identities=7% Similarity=0.185 Sum_probs=24.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEeCc
Q 044886 6 GPSKPESGMIALTNHAIDSGINVLDTS 32 (183)
Q Consensus 6 g~~~~~~~~~~~l~~A~~~Gi~~~DtA 32 (183)
|..++.++..++++..-+.|+..|+.+
T Consensus 19 ~~~~~~~~k~~ia~~L~~~Gv~~IE~g 45 (382)
T 2ztj_A 19 KANFSTQDKVEIAKALDEFGIEYIEVT 45 (382)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCCcCHHHHHHHHHHHHHcCcCEEEEc
Confidence 456889999999999999999999975
No 92
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=33.56 E-value=58 Score=20.56 Aligned_cols=60 Identities=13% Similarity=-0.103 Sum_probs=31.6
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCcCHHHHHHHhhcCCeeEEeeecC
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEAFASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
..+|++++...-+..+ .++.+.++++. ..+.-|-+|.........+......+++.=+++
T Consensus 46 ~~~dlvi~d~~l~~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~ 108 (133)
T 3nhm_A 46 HPPDVLISDVNMDGMD---GYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVK 108 (133)
T ss_dssp SCCSEEEECSSCSSSC---HHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCC
T ss_pred CCCCEEEEeCCCCCCC---HHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCC
Confidence 3589998876544333 34555566664 357778888754433345555444444443333
No 93
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=33.55 E-value=1.7e+02 Score=22.90 Aligned_cols=145 Identities=12% Similarity=0.022 Sum_probs=82.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
.+.++..+..+.+++.|++.|..--.-. -..+...-+++++. +. .....+.+... .+-+.|+.++++++
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~-~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~-~~~~~l~~~~i~~i- 215 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGD-EEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLL-RLDRLVQELGIEFI- 215 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-HHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHH-HHHHHHHHTTCCCE-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC-HHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHH-HHHHHHHhcCCCEE-
Confidence 3677888888999999999987432111 01233333445432 11 11233444433 23456666665544
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCcCHHHHHHHhhcC-CeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIK-HIDLSEAFASTIRRAHTIH-PITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iG~s~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
..|-+.. .++.+.+++++-.|- ..|=+-++...++++++.. ..+++|+..+..--- ... .+ .+|
T Consensus 216 ----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~a~~~g 287 (356)
T 3ro6_B 216 ----EQPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARRIATIAETAG 287 (356)
T ss_dssp ----ECCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHHHHHHHHHHT
T ss_pred ----ECCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHHHHHHHHHcC
Confidence 3443222 255666666543333 2233347888999999888 899999976643211 111 22 889
Q ss_pred CeEEEeccCCcc
Q 044886 153 IGIVAYNLLECE 164 (183)
Q Consensus 153 i~v~a~~~l~~G 164 (183)
+.++..+.+.++
T Consensus 288 i~~~~~~~~es~ 299 (356)
T 3ro6_B 288 IDLMWGCMDESR 299 (356)
T ss_dssp CEEEECCCSCCH
T ss_pred CEEEecCCcccH
Confidence 999887766554
No 94
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=33.42 E-value=1e+02 Score=24.17 Aligned_cols=78 Identities=13% Similarity=0.031 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHHHHcCCCCcceEEeccCCC--CCCHHHHHHHHHHHHHcCCccEEEecCc-CHHHHHHHhhcCCeeEEe
Q 044886 59 DPAYLRAACEASLKRLDVDCIDLYDQHRIDT--KVPIEVTIGELKRLVEEGKIKHIDLSEA-FASTIRRAHTIHPITVVR 135 (183)
Q Consensus 59 ~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q 135 (183)
+.+.. ..+.+.|+..|++|+++---..... .......++.+.++++.=.+--++.... +++..+++++....|.++
T Consensus 227 ~~~~~-~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 227 DIADH-IGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CHHHH-HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CHHHH-HHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 44443 4566778888987777643211011 1111112455566666556777777775 799999999988888988
Q ss_pred ee
Q 044886 136 LE 137 (183)
Q Consensus 136 ~~ 137 (183)
+-
T Consensus 306 iG 307 (338)
T 1z41_A 306 IG 307 (338)
T ss_dssp EC
T ss_pred ec
Confidence 84
No 95
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=33.05 E-value=35 Score=23.97 Aligned_cols=80 Identities=13% Similarity=0.118 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC----cCHHHHHHHhhcCCee
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE----AFASTIRRAHTIHPIT 132 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~----~~~~~l~~~~~~~~~~ 132 (183)
..+.+.+.+.+.+.-+.+|++ ++++| +..--+.++.+.+... .+..|=+.- ++.-.++.++.....-
T Consensus 25 ~~Tl~di~~~l~~~a~~~g~~-l~~~Q------SN~EGeLId~Ih~a~~--~~dgiIINpgA~THtSvAlrDAl~~v~~P 95 (154)
T 1uqr_A 25 SQTLSDIEQHLQQSAQAQGYE-LDYFQ------ANGEESLINRIHQAFQ--NTDFIIINPGAFTHTSVAIRDALLAVSIP 95 (154)
T ss_dssp CCCHHHHHHHHHHHHHHTTCE-EEEEE------CSSHHHHHHHHHHTTT--TCCEEEEECTTHHHHCHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHCCCE-EEEEe------eCCHHHHHHHHHHhhh--cCcEEEECcchhccchHHHHHHHHhCCCC
Confidence 567899999999999999985 88887 2233467888887753 455555553 4445667777766667
Q ss_pred EEeeecCcccCCc
Q 044886 133 VVRLEWSLRSRDV 145 (183)
Q Consensus 133 ~~q~~~~~~~~~~ 145 (183)
++.+..|-+..+.
T Consensus 96 ~VEVHiSNi~aRE 108 (154)
T 1uqr_A 96 FIEVHLSNVHARE 108 (154)
T ss_dssp EEEEESSCGGGSC
T ss_pred EEEEEecCccccc
Confidence 9999998776553
No 96
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=32.77 E-value=72 Score=25.59 Aligned_cols=89 Identities=13% Similarity=0.034 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCCCcceEEeccCCCCCCHH-HHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecC-c
Q 044886 63 LRAACEASLKRLDVDCIDLYDQHRIDTKVPIE-VTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWS-L 140 (183)
Q Consensus 63 i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~-~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~-~ 140 (183)
--..+.+.|+..|++||++ |......... .-++.+.++++.=.+--++....+++..+++++....|.|++-=- +
T Consensus 256 ~~~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~~l 332 (377)
T 2r14_A 256 MAFYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARLDDNTADAVAFGRPFI 332 (377)
T ss_dssp HHHHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCceEEeecHHHH
Confidence 3455677888888776665 4421100000 024556677777677778888888999999999988899988433 3
Q ss_pred ccCCcHHHHhcCCe
Q 044886 141 RSRDVKEEMELGIG 154 (183)
Q Consensus 141 ~~~~~~~~~~~~i~ 154 (183)
.+++....++.|..
T Consensus 333 ~~P~l~~k~~~g~~ 346 (377)
T 2r14_A 333 ANPDLPERFRLGAA 346 (377)
T ss_dssp HCTTHHHHHHHTCC
T ss_pred hCchHHHHHHcCCC
Confidence 33333334544433
No 97
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=32.59 E-value=1.8e+02 Score=22.79 Aligned_cols=141 Identities=13% Similarity=0.024 Sum_probs=83.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+.++.+++.|++.|-.--.-. ...+...-+++++. +. . ....+.+... +.++.|. ..++
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~-~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~----~~~~~L~--~~~i 211 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTG-IEADIARVKAIREAVGFDIKLRLDANQAWTPKDAV----KAIQALA--DYQI 211 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHH----HHHHHTT--TSCE
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHH----HHHHHHH--hcCC
Confidence 677888888899999999987432111 01233344555542 11 1 1123443322 2333442 3566
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEE-ecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHID-LSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~ 154 (183)
.++..|-+.. .++.+.+++++-.|--.+ =+-++...++++++....+++|+..+..--- ... .+ .+|+.
T Consensus 212 ~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~ 287 (354)
T 3jva_A 212 ELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIE 287 (354)
T ss_dssp EEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCE
T ss_pred CEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCe
Confidence 6777764433 266777887765553322 2347889999999988899999976654211 111 23 89999
Q ss_pred EEEeccC
Q 044886 155 IVAYNLL 161 (183)
Q Consensus 155 v~a~~~l 161 (183)
++..+.+
T Consensus 288 ~~~~~~~ 294 (354)
T 3jva_A 288 CMIGCMA 294 (354)
T ss_dssp EEECCCT
T ss_pred EEecCCC
Confidence 9888877
No 98
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=31.76 E-value=55 Score=24.80 Aligned_cols=128 Identities=9% Similarity=-0.071 Sum_probs=70.8
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCC----chHHHHHH------HHhhC-CCC------CCCCCHHHHHHHHHH-H
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPH----TNEILLGK------VIYED-GKY------SYCGDPAYLRAACEA-S 70 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g----~sE~~~g~------~l~~~-~k~------~~~~~~~~i~~~~~~-s 70 (183)
.+.+++.++++.|.+.|++.|=.++|+..+ ..|.+... .+++. .+. ..+..++.. ..+++ +
T Consensus 17 ~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~Ev~~~~~~~-~~l~~~~ 95 (262)
T 3qy7_A 17 GDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQEIRIYGEVE-QDLAKRQ 95 (262)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCEEECCTTHH-HHHHTTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeEEecchhHH-HHHhcCC
Confidence 578889999999999999999988887532 12222221 11111 111 123333222 22222 2
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC------cCHHHHHHHhhcCCeeEEeeecCccc
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE------AFASTIRRAHTIHPITVVRLEWSLRS 142 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~------~~~~~l~~~~~~~~~~~~q~~~~~~~ 142 (183)
+-.|+ --|.+++-.+.. .....+.+.+.++.+.|.+--|+=-. ...+.+.++.+.. ..+|+..+.+.
T Consensus 96 ~~~l~--~~~~vl~e~~~~-~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G--~~iEiN~~s~~ 168 (262)
T 3qy7_A 96 LLSLN--DTKYILIEFPFD-HVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKG--AASQITSGSLA 168 (262)
T ss_dssp SCCGG--GSSEEEEECCTT-CCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTT--CEEEEEHHHHH
T ss_pred CcEEC--CceEEEEeCCCc-cCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCC--CEEEEECCccC
Confidence 22232 124455554432 23345778888888899887777443 1234566666555 35787766554
No 99
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=31.44 E-value=1.6e+02 Score=23.06 Aligned_cols=74 Identities=12% Similarity=-0.015 Sum_probs=45.7
Q ss_pred HHHHHHHHHcCCCCcceEEe-ccCCC-CCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeec
Q 044886 65 AACEASLKRLDVDCIDLYDQ-HRIDT-KVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 65 ~~~~~sL~~lg~~~iDl~~l-h~~~~-~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~ 138 (183)
..+.+.|+..|+|++++-.= ..+.. .....-.++.+.++++.=.+--++... .+++..+++++....|.+++-=
T Consensus 232 ~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR 308 (340)
T 3gr7_A 232 VPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGR 308 (340)
T ss_dssp HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECH
T ss_pred HHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecH
Confidence 34667778889776665320 01100 001111355566666665677777777 4789999999988888888843
No 100
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=30.48 E-value=2.2e+02 Score=23.25 Aligned_cols=28 Identities=7% Similarity=0.122 Sum_probs=24.6
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeEeCcC
Q 044886 6 GPSKPESGMIALTNHAIDSGINVLDTSD 33 (183)
Q Consensus 6 g~~~~~~~~~~~l~~A~~~Gi~~~DtA~ 33 (183)
|.+++.++-.++++...+.|+..|+.+.
T Consensus 55 ~~~~s~eeKl~Ia~~L~~~Gv~~IEvG~ 82 (423)
T 3ivs_A 55 NAFFDTEKKIQIAKALDNFGVDYIELTS 82 (423)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCSEEEECC
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEee
Confidence 5568999999999999999999999763
No 101
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=30.31 E-value=41 Score=19.63 Aligned_cols=46 Identities=15% Similarity=0.060 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCC
Q 044886 59 DPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGK 108 (183)
Q Consensus 59 ~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ 108 (183)
+.+.+...+...+..- .+.-.+=..|...+...+.+.|..+++.|.
T Consensus 28 ~~~~L~~~l~~~~~~~----~~~~V~I~aD~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 28 TEEMVTQLSRQEFDKD----NNTLFLVGGAKEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp CHHHHHHHHHHHHHHC----TTCCEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhhC----CCceEEEEcCCCCCHHHHHHHHHHHHHcCC
Confidence 4555666655554432 122222245667889999999999999874
No 102
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=30.16 E-value=1.9e+02 Score=22.40 Aligned_cols=145 Identities=10% Similarity=0.037 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCc-hHHHHHHHHhhCCC-C------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHT-NEILLGKVIYEDGK-Y------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~-sE~~~g~~l~~~~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+..+.+.+.|++.|..-- |... .....-+++++.+. . ....+.+...+-+ +.|+.++++ +
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~-~~l~~~~i~---~ 212 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKV--GENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFA-RAVYQKGID---I 212 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--CSCHHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHH-HHHHHTTCC---C
T ss_pred CHHHHHHHHHHHHHcCcCEEEEee--cCCHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHH-HHHHhcCCC---e
Confidence 567778888889999999887421 1111 12222355554332 1 1234566555444 447777654 1
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccC-CcHH--HH--hcCCeE
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSR-DVKE--EM--ELGIGI 155 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~--~~--~~~i~v 155 (183)
.++..|-+. +-++.+.++++.-.|--.+-- -++...++++++....+++|+..+-.-- +... .+ .+|+.+
T Consensus 213 ~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~~g~~~ 288 (345)
T 2zad_A 213 AVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKL 288 (345)
T ss_dssp SEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHHHHHHHHHHHHHHTTTCEE
T ss_pred eeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEecccccHHHHHHHHHHHHHcCCeE
Confidence 144555332 236777788776555443332 3688999999998889999996654111 1111 22 889998
Q ss_pred EEeccCCcc
Q 044886 156 VAYNLLECE 164 (183)
Q Consensus 156 ~a~~~l~~G 164 (183)
+..+.+.++
T Consensus 289 ~~~~~~es~ 297 (345)
T 2zad_A 289 MIGCMGESS 297 (345)
T ss_dssp EECCSSCCH
T ss_pred EEecCcccH
Confidence 888776443
No 103
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=30.00 E-value=2.1e+02 Score=22.74 Aligned_cols=142 Identities=9% Similarity=-0.022 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh-CCC-C------CCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE-DGK-Y------SYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~-~~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
.+.++..+..+.+.+.|++.|..-.....-.....+-+++++ .+. . ....+.+...+-++. |+.+++++
T Consensus 148 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~~~~~~-l~~~~i~~-- 224 (391)
T 2qgy_A 148 KDTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTKSFLKE-VSSFNPYW-- 224 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHHHHHHH-HGGGCCSE--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHHHHHHH-HHhcCCCe--
Confidence 367888888899999999988742111100112222334443 121 1 123456655444433 77776553
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCCc-HH---HH--hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRDV-KE---EM--ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~---~~--~~~i 153 (183)
+..|-+. +.++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+..-.-. .. .+ .+|+
T Consensus 225 ---iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi 297 (391)
T 2qgy_A 225 ---IEEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGI 297 (391)
T ss_dssp ---EECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTC
T ss_pred ---EeCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCC
Confidence 3444322 2377778888776655444333 67899999999988999999877543221 11 22 8899
Q ss_pred eEEEecc
Q 044886 154 GIVAYNL 160 (183)
Q Consensus 154 ~v~a~~~ 160 (183)
.++..+.
T Consensus 298 ~~~~~~~ 304 (391)
T 2qgy_A 298 FISPHCW 304 (391)
T ss_dssp EECCBCC
T ss_pred EEeccCC
Confidence 8887775
No 104
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=29.66 E-value=2.3e+02 Score=23.15 Aligned_cols=126 Identities=15% Similarity=0.118 Sum_probs=79.9
Q ss_pred CHHHHHHHHHHHHH-cCC--C---eEeCcC--CCCCCchHHHHHHHHhhCCCCC-----------CCCCHHHHHHHHHHH
Q 044886 10 PESGMIALTNHAID-SGI--N---VLDTSD--VYGPHTNEILLGKVIYEDGKYS-----------YCGDPAYLRAACEAS 70 (183)
Q Consensus 10 ~~~~~~~~l~~A~~-~Gi--~---~~DtA~--~Yg~g~sE~~~g~~l~~~~k~~-----------~~~~~~~i~~~~~~s 70 (183)
+.+++.+.++.|++ .|+ . .+|.+. .|. .+++. ...++++..+.+.+.
T Consensus 220 ~~~~~l~~i~~ai~~~G~~g~v~l~vD~aase~~~--------------n~~y~~~~~~~~~~~~~~~t~~eai~~~~~~ 285 (436)
T 2al1_A 220 TAEEALDLIVDAIKAAGHDGKVKIGLDCASSEFFK--------------DGKYDLDFKNPNSDKSKWLTGPQLADLYHSL 285 (436)
T ss_dssp CHHHHHHHHHHHHHHHTCTTTCEEEEECCGGGGEE--------------TTEECTTTTCTTCCGGGCBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCcceEEEEechhhhhcc--------------CCceEEecccccccccccCCHHHHHHHHHHH
Confidence 56778888888885 464 2 366642 221 11111 124667666666777
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC--cCHHHHHHHhhcCCeeEEeeecCcccCCc-HH
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE--AFASTIRRAHTIHPITVVRLEWSLRSRDV-KE 147 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~--~~~~~l~~~~~~~~~~~~q~~~~~~~~~~-~~ 147 (183)
++.. ++++|-.|-+..+ |+.+.+|.+..+|--.|=-. +++..++++++....+++|+..|-+-.=- ..
T Consensus 286 l~~y-----~i~~iEdPl~~dD----~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~qiGGitea~ 356 (436)
T 2al1_A 286 MKRY-----PIVSIEDPFAEDD----WEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQIGTLSESI 356 (436)
T ss_dssp HHHS-----CEEEEECCSCTTC----HHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHH
T ss_pred HHhC-----CcEEEECCCCCcC----HHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhhcCCHHHHH
Confidence 7664 4677777754433 77788888887765554433 36899999999988999999877543211 11
Q ss_pred ---HH--hcCCeEEEe
Q 044886 148 ---EM--ELGIGIVAY 158 (183)
Q Consensus 148 ---~~--~~~i~v~a~ 158 (183)
.+ .+|+.++..
T Consensus 357 ~ia~lA~~~g~~~~~s 372 (436)
T 2al1_A 357 KAAQDSFAAGWGVMVS 372 (436)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHcCCeEEEe
Confidence 23 889987653
No 105
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=29.62 E-value=1.2e+02 Score=23.92 Aligned_cols=78 Identities=12% Similarity=0.040 Sum_probs=45.8
Q ss_pred CHHHHHHHHHHHHHHcCCCCcceEE-eccCCCCC--CHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEE
Q 044886 59 DPAYLRAACEASLKRLDVDCIDLYD-QHRIDTKV--PIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVV 134 (183)
Q Consensus 59 ~~~~i~~~~~~sL~~lg~~~iDl~~-lh~~~~~~--~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~ 134 (183)
+.+.. ..+-+.|+..|+||+++-. -..+.... .....++.+.++++.-.+--++... ++++..+++++....|.+
T Consensus 237 ~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V 315 (349)
T 3hgj_A 237 SLEDT-LAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLV 315 (349)
T ss_dssp CHHHH-HHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEE
T ss_pred CHHHH-HHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEE
Confidence 44443 3466777888877766542 00111000 0111245556666654566666665 578889999988878888
Q ss_pred eee
Q 044886 135 RLE 137 (183)
Q Consensus 135 q~~ 137 (183)
++-
T Consensus 316 ~iG 318 (349)
T 3hgj_A 316 LLG 318 (349)
T ss_dssp EES
T ss_pred Eec
Confidence 884
No 106
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=28.14 E-value=2.3e+02 Score=22.59 Aligned_cols=141 Identities=9% Similarity=0.010 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCC----CCC------------Cc----h---HHHHHHHHhh-CCC-C------CCCC
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDV----YGP------------HT----N---EILLGKVIYE-DGK-Y------SYCG 58 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~------------g~----s---E~~~g~~l~~-~~k-~------~~~~ 58 (183)
+.++..+..+.+.+.|++.|..-.. +|. |. . ....-+++++ .+. . ....
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 6788888889999999998773210 121 00 0 1122233333 121 1 1234
Q ss_pred CHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeee
Q 044886 59 DPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLE 137 (183)
Q Consensus 59 ~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~ 137 (183)
+.+...+-++. |+.++ +.++..|-+.. .++.+.++++.-.|--.+--+ ++.+.++++++....+++|+.
T Consensus 230 ~~~~ai~~~~~-l~~~~-----i~~iE~P~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 230 GTNSAIQFAKA-IEKYR-----IFLYEEPIHPL----NSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp CHHHHHHHHHH-HGGGC-----EEEEECSSCSS----CHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHH-HHhcC-----CCeEECCCChh----hHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 55554444333 55544 44566664322 367777888776555444333 578899999988889999998
Q ss_pred cCcccCC-cHH---HH--hcCCeEEEecc
Q 044886 138 WSLRSRD-VKE---EM--ELGIGIVAYNL 160 (183)
Q Consensus 138 ~~~~~~~-~~~---~~--~~~i~v~a~~~ 160 (183)
.+-.-.- ... .+ .+|+.++..+.
T Consensus 300 ~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 328 (410)
T 2gl5_A 300 LCLCGGITEGKKICDYANIYDTTVQVHVC 328 (410)
T ss_dssp TTTTTHHHHHHHHHHHHHTTTCEECCCCC
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEeecCC
Confidence 7654211 111 22 77888877665
No 107
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=27.99 E-value=2.3e+02 Score=22.50 Aligned_cols=145 Identities=12% Similarity=0.037 Sum_probs=83.5
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCcCCCCCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 10 PESGMIALTNHAIDS-GINVLDTSDVYGPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
+.++..+.++.+++. |++.|-.--.-..-..+...-+++++. +. . ....+.+... .+-+.|+.+++++
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~A~-~~~~~l~~~~i~~-- 224 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINARWDRRTAL-HYLPILAEAGVEL-- 224 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTTCSCHHHHH-HHHHHHHHTTCCE--
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHH-HHHHHHHhcCCCE--
Confidence 567777778888887 999887432111001233344556543 21 1 1233444433 3445667776543
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHHHcCCccE-EEecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLVEEGKIKH-IDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGI 153 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i 153 (183)
+..|-+.. -++.+.++++.-.|.- .|=+-++...++++++....+++|+..+..--- ... .+ .+|+
T Consensus 225 ---iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi 297 (383)
T 3i4k_A 225 ---FEQPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGL 297 (383)
T ss_dssp ---EESCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTC
T ss_pred ---EECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCC
Confidence 34553322 2566667776544432 222347889999999998899999987654311 111 22 8899
Q ss_pred eEEEeccCCcc
Q 044886 154 GIVAYNLLECE 164 (183)
Q Consensus 154 ~v~a~~~l~~G 164 (183)
.++..+.+.++
T Consensus 298 ~~~~~~~~es~ 308 (383)
T 3i4k_A 298 ACHGATSLEGP 308 (383)
T ss_dssp EEEECCSCCCH
T ss_pred eEEeCCCCccH
Confidence 99877665543
No 108
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.62 E-value=1.3e+02 Score=19.62 Aligned_cols=66 Identities=12% Similarity=0.015 Sum_probs=40.3
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
++.+....+|++++...-+..+ -++.++.+++. ..+.-|-++.. +.+...++.+....+++.=+++
T Consensus 44 l~~l~~~~~dlii~D~~l~~~~---g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~ 113 (154)
T 3gt7_A 44 VRFLSLTRPDLIISDVLMPEMD---GYALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCK 113 (154)
T ss_dssp HHHHTTCCCSEEEEESCCSSSC---HHHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCC
T ss_pred HHHHHhCCCCEEEEeCCCCCCC---HHHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCC
Confidence 3334445689999876644433 34555566665 46777888764 5566667776665566655544
No 109
>1zke_A Hypothetical protein HP1531; layer of helix-turn-helix, structural G PSI, protein structure initiative, midwest center for struc genomics; 1.60A {Helicobacter pylori} SCOP: a.30.6.1
Probab=27.54 E-value=52 Score=20.20 Aligned_cols=28 Identities=18% Similarity=0.078 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEeccCC
Q 044886 61 AYLRAACEASLKRLDVDCIDLYDQHRID 88 (183)
Q Consensus 61 ~~i~~~~~~sL~~lg~~~iDl~~lh~~~ 88 (183)
+.++..++-.|.--.+..+|.+++-+-.
T Consensus 15 E~~q~eI~~lL~~AkiSl~DyImiKRGS 42 (83)
T 1zke_A 15 EDSQNEIEMLLKLANLSLGDFIEIKRGS 42 (83)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhhhhHHHhheeccC
Confidence 4455556666666688889999887653
No 110
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=27.44 E-value=1.4e+02 Score=23.62 Aligned_cols=66 Identities=11% Similarity=-0.030 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCCCcceEEeccCC----CCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeee
Q 044886 65 AACEASLKRLDVDCIDLYDQHRID----TKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLE 137 (183)
Q Consensus 65 ~~~~~sL~~lg~~~iDl~~lh~~~----~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~ 137 (183)
..+.+.|+..|++|+++ |... +..+ ++.+.++++.=.+--++....+++..+++++....|.+++-
T Consensus 254 ~~~a~~l~~~G~d~i~v---~~~~~~~~~~~~----~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 254 LYLIEELAKRGIAYLHM---SETDLAGGKPYS----EAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEES
T ss_pred HHHHHHHHHhCCCEEEE---ecCcccCCCccc----HHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEEC
Confidence 44667788888766665 4321 1112 45667777776777888888889999999999888998884
No 111
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=27.20 E-value=2.6e+02 Score=22.89 Aligned_cols=147 Identities=12% Similarity=0.147 Sum_probs=82.4
Q ss_pred CCCCCCHHHHHHHHHHHHHc-CCCeEeCcCCCCCCchHHHHHHHHhhC-C--CC----CCCCCHHHHHHHHHHHHHHcCC
Q 044886 5 YGPSKPESGMIALTNHAIDS-GINVLDTSDVYGPHTNEILLGKVIYED-G--KY----SYCGDPAYLRAACEASLKRLDV 76 (183)
Q Consensus 5 ~g~~~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~--k~----~~~~~~~~i~~~~~~sL~~lg~ 76 (183)
|+...+.++..+..+.+++. |++.|=.--.......+...-+++++. . .. ....+.+... +.++.|.
T Consensus 186 ~~~~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai----~~~~~L~- 260 (445)
T 3va8_A 186 YGPALDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSK----WVAKELE- 260 (445)
T ss_dssp TCCBCSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHH----HHHHHTT-
T ss_pred cccCCCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHH----HHHHHHh-
Confidence 33335778888888888875 999865321111001222233444432 1 11 1122333322 3344554
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCcCHHHHHHHhhcCCeeEEeeecCccc--CCcHH--HH--
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK-HIDLSEAFASTIRRAHTIHPITVVRLEWSLRS--RDVKE--EM-- 149 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~--~~~~~--~~-- 149 (183)
++ +.++-.|- + -++.+.++++.-.|- +.|=|.++...+.++++....+++|+..+-.- .+... .+
T Consensus 261 ~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea~kia~lA~ 332 (445)
T 3va8_A 261 GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICA 332 (445)
T ss_dssp TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHH
T ss_pred hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHHHHHHHHHH
Confidence 33 55555552 2 477788888765443 34444577888899998888999999765432 11111 23
Q ss_pred hcCCeEEEeccCCcc
Q 044886 150 ELGIGIVAYNLLECE 164 (183)
Q Consensus 150 ~~~i~v~a~~~l~~G 164 (183)
.+|+.+...+...+|
T Consensus 333 ~~gv~v~~h~~~e~~ 347 (445)
T 3va8_A 333 TWGLRLSMHSNSHLG 347 (445)
T ss_dssp HHTCEEEECCCSCCH
T ss_pred HcCCEEEEeCCcccH
Confidence 889999888776554
No 112
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=27.15 E-value=88 Score=25.83 Aligned_cols=47 Identities=15% Similarity=0.131 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 60 ~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
.+...+.+.+.+++||+.+.|.+. -.+.....+.+.+++|++.|.+-
T Consensus 89 ~~~~~~~f~~~~~~LgI~~~d~~~----r~t~~~~~~~~~i~~L~~~G~aY 135 (461)
T 1li5_A 89 VDRMIAEMHKDFDALNILRPDMEP----RATHHIAEIIELTEQLIAKGHAY 135 (461)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSBCC----BGGGCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCcccc----cccchHHHHHHHHHHHHHCCCEE
Confidence 455778899999999998777642 22235778899999999999874
No 113
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=27.12 E-value=1.6e+02 Score=23.29 Aligned_cols=72 Identities=13% Similarity=-0.001 Sum_probs=43.1
Q ss_pred HHHHHHHHcCCCCcceEEec-cCCCC--CCHHHHHHHHHHHHHcCCccEEEecCc-CHHHHHHHhhcCCeeEEeee
Q 044886 66 ACEASLKRLDVDCIDLYDQH-RIDTK--VPIEVTIGELKRLVEEGKIKHIDLSEA-FASTIRRAHTIHPITVVRLE 137 (183)
Q Consensus 66 ~~~~sL~~lg~~~iDl~~lh-~~~~~--~~~~~~~~~l~~l~~~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~ 137 (183)
.+-+.|+..|++||++-.-. .+... ......++.+.++++.-.+--++.... +++..+++++....|.+++-
T Consensus 250 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 250 ELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVG 325 (363)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECC
T ss_pred HHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEec
Confidence 35667788887777764311 11100 011112444455555545667777764 78999999998878888874
No 114
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=26.91 E-value=1.2e+02 Score=18.89 Aligned_cols=64 Identities=22% Similarity=0.129 Sum_probs=37.6
Q ss_pred HcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 73 RLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 73 ~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
.+....+|++++...-+..+ -++.++++++. ..+.-|-+|.. +.....++.+..-.+++.=+++
T Consensus 41 ~l~~~~~dlvllD~~~p~~~---g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~ 108 (122)
T 3gl9_A 41 KLSEFTPDLIVLXIMMPVMD---GFTVLKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFS 108 (122)
T ss_dssp HHTTBCCSEEEECSCCSSSC---HHHHHHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCC
T ss_pred HHHhcCCCEEEEeccCCCCc---HHHHHHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCC
Confidence 33445689998876544433 34555556554 45777888874 4555666666655555554443
No 115
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=26.06 E-value=2.6e+02 Score=22.57 Aligned_cols=137 Identities=11% Similarity=-0.008 Sum_probs=78.8
Q ss_pred CH-HHHHHHHHHHHHcCCCeEeCcCCCCCC-chHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCc
Q 044886 10 PE-SGMIALTNHAIDSGINVLDTSDVYGPH-TNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 10 ~~-~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
+. ++..+..+.+.+.|++.|..-- |.. ......-+++++. +. . ....+.+...+-++ .|+.++++++
T Consensus 184 ~~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~-~L~~~~i~~i 260 (428)
T 3bjs_A 184 QPKESLAEEAQEYIARGYKALKLRI--GDAARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLP-VLAEIQAGWL 260 (428)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEC--CSCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHH-HHHHTTCSCE
T ss_pred ChHHHHHHHHHHHHHCCCCEEEECC--CCCHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHH-HHHhcCCCEE
Confidence 44 7777888888999999877421 110 1122223444432 21 1 12446666555443 4777776643
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCC-ccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hc
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGK-IKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--EL 151 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~ 151 (183)
..|-+. +.++.+.+++++-. |--.+-- -++...++++++....+++|+..+-.-.- ... .+ .+
T Consensus 261 -----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~~A~~~ 331 (428)
T 3bjs_A 261 -----EEPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAAMASAY 331 (428)
T ss_dssp -----ECCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHHHHHHT
T ss_pred -----ECCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHHc
Confidence 344322 23677777776644 4333332 36789999999988899999987654211 111 22 67
Q ss_pred CCeEEEe
Q 044886 152 GIGIVAY 158 (183)
Q Consensus 152 ~i~v~a~ 158 (183)
|+.++..
T Consensus 332 gi~~~~~ 338 (428)
T 3bjs_A 332 RIPINAH 338 (428)
T ss_dssp TCCBCCB
T ss_pred CCeEEec
Confidence 7776666
No 116
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=26.05 E-value=1.3e+02 Score=19.00 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=33.2
Q ss_pred CcceEEeccCCCCCCHHHHHHHHHHHHH---cCCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 78 CIDLYDQHRIDTKVPIEVTIGELKRLVE---EGKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 78 ~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
.+|++++...-+..+ .++.++++++ ...+.-|-+++. +.....++.+....+++.-+++
T Consensus 54 ~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~ 116 (143)
T 3cnb_A 54 KPDVVMLDLMMVGMD---GFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLN 116 (143)
T ss_dssp CCSEEEEETTCTTSC---HHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCC
T ss_pred CCCEEEEecccCCCc---HHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCC
Confidence 478888876543333 2444555554 345667777764 4455556666555555554443
No 117
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=26.05 E-value=2.4e+02 Score=22.08 Aligned_cols=141 Identities=11% Similarity=-0.002 Sum_probs=80.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhh-CCC-C------CCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYE-DGK-Y------SYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~-~~k-~------~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
+.++..+..+.+.+.|++.|..-- +.......+ +++++ .+. . ....+.+. .+ +-+.|+.++++
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v-~avr~~~g~~~~l~vDan~~~~~~~-~~-~~~~l~~~~i~---- 211 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPV-RAVRERFGDDVLLQVDANTAYTLGD-AP-QLARLDPFGLL---- 211 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHH-HHHHHHHCTTSEEEEECTTCCCGGG-HH-HHHTTGGGCCS----
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHH-HHHHHhcCCCceEEEeccCCCCHHH-HH-HHHHHHhcCCC----
Confidence 567778888888999999876421 111223333 33442 111 1 12334444 32 33336666554
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCe
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDL-SEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIG 154 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~ 154 (183)
++..|-+. +.++.+.++++.-.|--.+- +-++.+.++++++....+++|+..+..-.- ... .+ .+|+.
T Consensus 212 -~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~ 286 (368)
T 1sjd_A 212 -LIEQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRVHDVCAAHGIP 286 (368)
T ss_dssp -EEECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCC
T ss_pred -eEeCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCc
Confidence 34455322 23777778877655543332 236889999999998899999987654321 111 23 88999
Q ss_pred EEEeccCCcc
Q 044886 155 IVAYNLLECE 164 (183)
Q Consensus 155 v~a~~~l~~G 164 (183)
+++.+-+.++
T Consensus 287 ~~~~~~~es~ 296 (368)
T 1sjd_A 287 VWCGGMIETG 296 (368)
T ss_dssp EEECCCCCCH
T ss_pred EEeCCccccH
Confidence 6666555443
No 118
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=25.62 E-value=1.8e+02 Score=20.50 Aligned_cols=79 Identities=13% Similarity=-0.103 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCc-cEEEecCcCHHHHHHHhhcCCeeEEe
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKI-KHIDLSEAFASTIRRAHTIHPITVVR 135 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iG~s~~~~~~l~~~~~~~~~~~~q 135 (183)
++..-.+++.+.+-|+..|.+.+|+-. +..++..+.-+.-..+.+.+.+|.. +.|-+|....-.-..+-+...+-+..
T Consensus 11 DhaG~~lK~~i~~~L~~~G~eV~D~G~-~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv~GIRAAl 89 (162)
T 2vvp_A 11 DHAGYELKQRIIEHLKQTGHEPIDCGA-LRYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQIAANKVPGARCAL 89 (162)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEECSC-CSCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSSHHHHHHHHTSTTCCEEE
T ss_pred CchhHHHHHHHHHHHHHCCCEEEEeCC-CCCCCCCChHHHHHHHHHHHHcCCCceEEEEeCCcHHHHHHHhcCCCeEEEE
Confidence 344456788999999999999888854 3444356788888888888888886 67777877776666666665555554
Q ss_pred e
Q 044886 136 L 136 (183)
Q Consensus 136 ~ 136 (183)
+
T Consensus 90 ~ 90 (162)
T 2vvp_A 90 A 90 (162)
T ss_dssp C
T ss_pred e
Confidence 3
No 119
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=25.43 E-value=2.1e+02 Score=21.19 Aligned_cols=27 Identities=15% Similarity=0.207 Sum_probs=17.6
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCcCCC
Q 044886 9 KPESGMIALTNHAIDS-GINVLDTSDVY 35 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Y 35 (183)
.++++-.++++.+++. |+.++|.=-..
T Consensus 80 ~~~~~~~~ll~~~~~~~~~d~iDvEl~~ 107 (238)
T 1sfl_A 80 FTNDSYLNLISDLANINGIDMIDIEWQA 107 (238)
T ss_dssp CCHHHHHHHHHHGGGCTTCCEEEEECCT
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEEccC
Confidence 4566677777777776 57777754333
No 120
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=25.40 E-value=2.5e+02 Score=22.06 Aligned_cols=139 Identities=10% Similarity=0.040 Sum_probs=81.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCch--HHHHHHHHhhC-C-CC------CCCCCHHHHHHHHHHHHHHcCCCCc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTN--EILLGKVIYED-G-KY------SYCGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~s--E~~~g~~l~~~-~-k~------~~~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
+.++..+..+.+.+.|++.|..-- |.+.- ....-+++++. + .. ....+.+...+-++ .|+.+++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~-~l~~~~i~~- 221 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKV--GRPDLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAAR-ALAPFDLHW- 221 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSSHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHH-HHGGGCCSE-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC--CCCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH-HHHhcCCCE-
Confidence 677888888999999999887431 21121 22222444431 1 11 12345555544443 467666553
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecC-cCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSE-AFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~-~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
+..|-+. +-++.+.++++.-.|--.+--+ ++.+.++++++....+++|+..+-+-.- ... .+ .+|
T Consensus 222 ----iEqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g 293 (371)
T 2ovl_A 222 ----IEEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANN 293 (371)
T ss_dssp ----EECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTT
T ss_pred ----EECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcC
Confidence 3455322 2366777777765554444333 6789999999998899999987754322 111 22 788
Q ss_pred CeEEEecc
Q 044886 153 IGIVAYNL 160 (183)
Q Consensus 153 i~v~a~~~ 160 (183)
+.++..+.
T Consensus 294 i~~~~h~~ 301 (371)
T 2ovl_A 294 MLLTSHGV 301 (371)
T ss_dssp CCEEECSC
T ss_pred CeEccccH
Confidence 88877654
No 121
>1ucr_A Protein DSVD; dissimilatory sulfite reductase D, DNA binding motif, sulfate-reducing bacteria, winged-helix motif, unknown function; 1.20A {Desulfovibrio vulgaris} SCOP: a.4.5.45 PDB: 1wq2_A
Probab=25.25 E-value=97 Score=19.05 Aligned_cols=28 Identities=11% Similarity=0.042 Sum_probs=23.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEecC
Q 044886 89 TKVPIEVTIGELKRLVEEGKIKHIDLSE 116 (183)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 116 (183)
|.....++=.++.+|+.+|++.+|...+
T Consensus 32 P~~k~r~vKK~~~~LV~Eg~leywSSGS 59 (78)
T 1ucr_A 32 PDMKQREVKKILTALVNDEVLEYWSSGS 59 (78)
T ss_dssp TTSCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred cccCHHHHHHHHHHHHhcCceEEEecCC
Confidence 4456778889999999999999998774
No 122
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=25.19 E-value=1.4e+02 Score=19.02 Aligned_cols=60 Identities=8% Similarity=-0.053 Sum_probs=34.4
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
..+|++++...-+..+ -++.+.++++. ..+.-|-+|.. +.....++.+....+++.=+++
T Consensus 47 ~~~dlvl~D~~lp~~~---g~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~ 110 (136)
T 3t6k_A 47 NLPDALICDVLLPGID---GYTLCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFE 110 (136)
T ss_dssp SCCSEEEEESCCSSSC---HHHHHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCC
T ss_pred CCCCEEEEeCCCCCCC---HHHHHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCC
Confidence 3578888876544433 34445555553 35667777764 3455556666655555554443
No 123
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=25.17 E-value=1.9e+02 Score=22.66 Aligned_cols=94 Identities=17% Similarity=0.237 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCcce-----EEeccCCCCCCHHHHHHHHHHHHHc-CCccEEEe---cCcCHHHHHHHhhcCCeeEE
Q 044886 64 RAACEASLKRLDVDCIDL-----YDQHRIDTKVPIEVTIGELKRLVEE-GKIKHIDL---SEAFASTIRRAHTIHPITVV 134 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl-----~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iG~---s~~~~~~l~~~~~~~~~~~~ 134 (183)
...+-+.|.++|+++|.+ +-.-.|.........|+.++++++. ..++...+ +....+.++++.+. ..+.+
T Consensus 32 k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~a-Gvd~v 110 (345)
T 1nvm_A 32 VRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQA-GARVV 110 (345)
T ss_dssp HHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHH-TCCEE
T ss_pred HHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhC-CcCEE
Q ss_pred eeecCcccCCcHHHH-----hcCCeEEEe
Q 044886 135 RLEWSLRSRDVKEEM-----ELGIGIVAY 158 (183)
Q Consensus 135 q~~~~~~~~~~~~~~-----~~~i~v~a~ 158 (183)
.+..++-..+...+. ++|+.++.+
T Consensus 111 ~I~~~~s~~~~~~~~i~~ak~~G~~v~~~ 139 (345)
T 1nvm_A 111 RVATHCTEADVSKQHIEYARNLGMDTVGF 139 (345)
T ss_dssp EEEEETTCGGGGHHHHHHHHHHTCEEEEE
T ss_pred EEEEeccHHHHHHHHHHHHHHCCCEEEEE
No 124
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=25.08 E-value=1.8e+02 Score=20.29 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=52.4
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHH--cCCccEEEecCcCHHHHHHH---hhcCCe
Q 044886 57 CGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVE--EGKIKHIDLSEAFASTIRRA---HTIHPI 131 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~--~G~ir~iG~s~~~~~~l~~~---~~~~~~ 131 (183)
..+.+.+.+.+.+.-.++|++ ++++| +..-.+.++.+.+... +|.|-.=|--+++.-.++.+ +.....
T Consensus 28 ~~Tl~di~~~l~~~a~~~g~~-v~~~Q------SN~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~ 100 (151)
T 3u80_A 28 RQDLDTLRKLCAEWGKDLGLE-VEVRQ------TDDEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENL 100 (151)
T ss_dssp CHHHHHHHHHHHHHHHHTTEE-EEEEE------CSCHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHcCCE-EEEEe------cCCHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCC
Confidence 346788999999998999975 77776 2223467777777754 33333334445566666666 444556
Q ss_pred eEEeeecCcccCC
Q 044886 132 TVVRLEWSLRSRD 144 (183)
Q Consensus 132 ~~~q~~~~~~~~~ 144 (183)
-++.+..|-+..+
T Consensus 101 P~VEVHiSNi~aR 113 (151)
T 3u80_A 101 PLMEVHISNPSAR 113 (151)
T ss_dssp CEEEEESSCCC--
T ss_pred CEEEEEcCCcccc
Confidence 6899988877655
No 125
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=24.92 E-value=1.3e+02 Score=18.62 Aligned_cols=62 Identities=8% Similarity=-0.040 Sum_probs=35.5
Q ss_pred CCCCcceEEeccCCCCCCHHHHHHHHHHHHH---cCCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 75 DVDCIDLYDQHRIDTKVPIEVTIGELKRLVE---EGKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 75 g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
....+|++++...-+..+- ++.++++++ ...+.-+-+|.. +......+.+....+++.-+++
T Consensus 46 ~~~~~dlvi~D~~l~~~~g---~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~ 111 (128)
T 1jbe_A 46 QAGGYGFVISDWNMPNMDG---LELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFT 111 (128)
T ss_dssp TTCCCCEEEEESCCSSSCH---HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCC
T ss_pred HhcCCCEEEEeCCCCCCCH---HHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCC
Confidence 3345899888765444333 344445554 235677777764 4555666666655555554443
No 126
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=24.71 E-value=1.8e+02 Score=23.53 Aligned_cols=47 Identities=13% Similarity=0.046 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 60 ~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
.+...+.+.+.+++||+...|.+.--. .....+.+.+++|++.|.+-
T Consensus 106 ~~~~~~~~~~~~~~Lgi~~~d~~~r~t----~~~~~~~~~~~~L~~kG~~Y 152 (414)
T 3c8z_A 106 GDRETQLFREDMAALRVLPPHDYVAAT----DAIAEVVEMVEKLLASGAAY 152 (414)
T ss_dssp HHHHHHHHHHHHHHTTCCCCSEEEEGG----GCHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHHHHHHHHcCCCCCcceeccc----chHHHHHHHHHHHHHCCCEE
Confidence 466788899999999998788764221 24567889999999999984
No 127
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=24.32 E-value=2.7e+02 Score=22.13 Aligned_cols=140 Identities=6% Similarity=-0.126 Sum_probs=81.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCID 80 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iD 80 (183)
.+.++..+.++.+.+.|++.|..--.-. -..+...-+++++. +. .....+.+...+ +-+.|+.+++++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~~-~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~-~~~~l~~~~i~~-- 225 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGRA-PRKDAANLRAMRQRVGADVEILVDANQSLGRHDALA-MLRILDEAGCYW-- 225 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-HHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHH-HHHHHHHTTCSE--
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCCC-HHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHH-HHHHHHhcCCCE--
Confidence 4678888999999999999988532111 01223333445432 11 112344554332 345567766543
Q ss_pred eEEeccCCCCCCHHHHHHHHHHHH-HcCCccEEEe-cCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 81 LYDQHRIDTKVPIEVTIGELKRLV-EEGKIKHIDL-SEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 81 l~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir~iG~-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
+..|-+.. -++.+.+++ +.-.|--.+- +-++...++++++....+++|+..+..--- ... .+ .+|
T Consensus 226 ---iEqP~~~~----d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g 298 (389)
T 3ozy_A 226 ---FEEPLSID----DIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAH 298 (389)
T ss_dssp ---EESCSCTT----CHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTT
T ss_pred ---EECCCCcc----cHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 34553322 366777887 6555433322 236788899999988899999987764311 111 22 788
Q ss_pred CeEEEec
Q 044886 153 IGIVAYN 159 (183)
Q Consensus 153 i~v~a~~ 159 (183)
+.++..+
T Consensus 299 i~~~~h~ 305 (389)
T 3ozy_A 299 LAWNPHT 305 (389)
T ss_dssp CEECCCC
T ss_pred CEEEecC
Confidence 8887664
No 128
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=24.21 E-value=1.4e+02 Score=18.97 Aligned_cols=59 Identities=15% Similarity=0.041 Sum_probs=35.5
Q ss_pred CcceEEeccCCCCCCHHHHHHHHHHHHH---cCCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 78 CIDLYDQHRIDTKVPIEVTIGELKRLVE---EGKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 78 ~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
.+|++++....+..+ .++.++++++ ...+.-|-+++. +......+.+..-.+++.-+++
T Consensus 52 ~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~ 114 (147)
T 2zay_A 52 HPHLIITEANMPKIS---GMDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVN 114 (147)
T ss_dssp CCSEEEEESCCSSSC---HHHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCC
T ss_pred CCCEEEEcCCCCCCC---HHHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCC
Confidence 479998876544333 3455555554 345777888874 4555666666655566555444
No 129
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=24.18 E-value=2.7e+02 Score=22.17 Aligned_cols=143 Identities=10% Similarity=-0.027 Sum_probs=83.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-C-C-C------CCCCCHHHHHHHHHHHHHHcCCCCc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-G-K-Y------SYCGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~-k-~------~~~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
.+.++..+.++.+++.|++.|-.--.-..-..+...-+++++. + . . ....+++. ..+.++.|. -.
T Consensus 163 ~~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~w~~~~----A~~~~~~L~--~~ 236 (391)
T 4e8g_A 163 GQPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRSLPSRD----ALRLSRECP--EI 236 (391)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTTCCCHHH----HHHHHHHCT--TS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCCHHH----HHHHHHHHh--hc
Confidence 3678888889999999999976432110001222333444321 2 1 1 12334433 223344553 24
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGKIK-HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
++ ++-.|-+ .++.+.++++.-.|- ..|=+-++...+.++++....+++|+.....--- ... .+ .+|
T Consensus 237 ~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~g 309 (391)
T 4e8g_A 237 PF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAAFRDICEARA 309 (391)
T ss_dssp CE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTT
T ss_pred Ce-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcC
Confidence 67 6666621 367778887765543 3333457889999999988899999987654211 111 23 889
Q ss_pred CeEEEeccCCcc
Q 044886 153 IGIVAYNLLECE 164 (183)
Q Consensus 153 i~v~a~~~l~~G 164 (183)
+.++..+.+.++
T Consensus 310 i~~~~~~~~es~ 321 (391)
T 4e8g_A 310 LPHSCDDAWGGD 321 (391)
T ss_dssp CCEEEECSSCSH
T ss_pred CeEEeCCcCCCH
Confidence 999888766554
No 130
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=24.16 E-value=66 Score=19.71 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHcCCccEEE
Q 044886 93 IEVTIGELKRLVEEGKIKHID 113 (183)
Q Consensus 93 ~~~~~~~l~~l~~~G~ir~iG 113 (183)
-..+-+.|.+|+++|+|...|
T Consensus 41 r~tV~~~L~~Le~~G~I~~~g 61 (81)
T 1qbj_A 41 KKEINRVLYSLAKKGKLQKEA 61 (81)
T ss_dssp HHHHHHHHHHHHHTTSEEEES
T ss_pred HHHHHHHHHHHHHCCCEEecC
Confidence 456789999999999999988
No 131
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=23.81 E-value=62 Score=21.99 Aligned_cols=28 Identities=25% Similarity=0.347 Sum_probs=24.2
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEecC
Q 044886 89 TKVPIEVTIGELKRLVEEGKIKHIDLSE 116 (183)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 116 (183)
+..+..-+++.|+.|.+.|.|+.+-+.+
T Consensus 48 ~~is~~TVYR~L~~L~e~Glv~~i~~~~ 75 (145)
T 3eyy_A 48 SGINISTVYRTLELLEELGLVSHAHLGH 75 (145)
T ss_dssp TTCCHHHHHHHHHHHHHHTSEEEEECGG
T ss_pred CCCCHhHHHHHHHHHHHCCcEEEEEeCC
Confidence 3466888999999999999999998764
No 132
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii}
Probab=23.73 E-value=99 Score=25.68 Aligned_cols=64 Identities=11% Similarity=-0.003 Sum_probs=42.9
Q ss_pred HHHHHHHHhhCCCCCCCCCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 41 EILLGKVIYEDGKYSYCGDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 41 E~~~g~~l~~~~k~~~~~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
.+++-++.+. +. .+..-.+...+.+.+.+++||+.+.|.+ |-.+..+.++++.+++|.++|.+-
T Consensus 75 dKIi~~A~~~-g~-~~~e~a~~~~~~f~~d~~~LgI~~d~~~----praTe~i~~i~~~i~~L~ekG~aY 138 (462)
T 3tqo_A 75 DKIIKRAGEN-KE-SPAALAERFIQILHEDEKALRVLSPDQE----PRATQYVPEIIKLIQKLLDNQYAY 138 (462)
T ss_dssp HHHHHHHHHT-TS-CHHHHHHHHHHHHHHHHHHHTCCCCSBC----CBGGGCHHHHHHHHHHHHHHTSEE
T ss_pred cHHHHHHHHc-CC-CHHHHHHHHHHHHHHHHHHcCCCCCccc----cChhhHHHHHHHHHHHHHHCCCEE
Confidence 4555555332 21 2223345567788899999999876653 222356788999999999999974
No 133
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=23.36 E-value=2.8e+02 Score=22.01 Aligned_cols=144 Identities=12% Similarity=-0.051 Sum_probs=84.9
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCC-C---CCCchHHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCC
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDV-Y---GPHTNEILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDV 76 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~-Y---g~g~sE~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~ 76 (183)
.+.++..+.++.+.+.|++.|-.--. + +.-..+...-+++++. +. . ....+.+. ..+.++.|.
T Consensus 144 ~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~~~~~~----A~~~~~~l~- 218 (386)
T 3fv9_G 144 DTPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNGLTVEH----ALRMLSLLP- 218 (386)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTCCCHHH----HHHHHHHSC-
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHH----HHHHHHHhh-
Confidence 36788888899999999998764311 0 1001223333455542 21 1 12334333 233445553
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc-EEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK-HIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM-- 149 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~-- 149 (183)
+..++ ++-.|-+ .++.+.++++.-.|. ..|=|-++...++++++....+++|+..+..--- ... .+
T Consensus 219 ~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~i~~~A~ 291 (386)
T 3fv9_G 219 PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITPMLRQRAIAA 291 (386)
T ss_dssp SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHH
T ss_pred ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHHHHHHHHHHH
Confidence 34566 6666643 367778888765543 2333447889999999988899999987654211 111 23
Q ss_pred hcCCeEEEeccCCcc
Q 044886 150 ELGIGIVAYNLLECE 164 (183)
Q Consensus 150 ~~~i~v~a~~~l~~G 164 (183)
.+|+.++..+.+.++
T Consensus 292 ~~gi~~~~~~~~es~ 306 (386)
T 3fv9_G 292 AAGMVMSVQDTVGSQ 306 (386)
T ss_dssp HTTCEEEEECSSCCH
T ss_pred HcCCEEEeCCCCCCH
Confidence 889999877666554
No 134
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=23.31 E-value=2.8e+02 Score=23.40 Aligned_cols=34 Identities=18% Similarity=0.357 Sum_probs=22.9
Q ss_pred HHHHHcCCccEEEecCcCHHHHHHHhhcCC--eeEEee
Q 044886 101 KRLVEEGKIKHIDLSEAFASTIRRAHTIHP--ITVVRL 136 (183)
Q Consensus 101 ~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~--~~~~q~ 136 (183)
+++...++ -||+|.++.++++++.+..+ .|++-+
T Consensus 102 r~~lg~~~--iiG~S~ht~eea~~A~~~G~~~aDYv~~ 137 (540)
T 3nl6_A 102 RKLVGPDM--VIGWSVGFPEEVDELSKMGPDMVDYIGV 137 (540)
T ss_dssp HHHHCTTS--EEEEEECSHHHHHHHHHTCC--CCEEEE
T ss_pred HHHhCCCC--EEEEECCCHHHHHHHHHcCCCCCCEEEE
Confidence 34443444 69999999999888876542 566555
No 135
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=23.29 E-value=2.2e+02 Score=20.79 Aligned_cols=82 Identities=17% Similarity=0.132 Sum_probs=46.3
Q ss_pred EEeccCCCCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcC-CeeEEeeecCcccCCc-----HH----HH-h
Q 044886 82 YDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIH-PITVVRLEWSLRSRDV-----KE----EM-E 150 (183)
Q Consensus 82 ~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~-~~~~~q~~~~~~~~~~-----~~----~~-~ 150 (183)
+++..|.+ ...+++++...+--++.-|++|=+.+.+-+...++++.. .+.++-+.++.-...+ .+ .+ +
T Consensus 18 ~YF~~~G~-eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~ 96 (201)
T 1vp8_A 18 VYFNKPGR-ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRK 96 (201)
T ss_dssp EEESSCSG-GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHH
T ss_pred EEecCCCc-ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHh
Confidence 44444543 335666665555555555999999987655555554442 3445555544433222 22 23 8
Q ss_pred cCCeEEEeccCCcc
Q 044886 151 LGIGIVAYNLLECE 164 (183)
Q Consensus 151 ~~i~v~a~~~l~~G 164 (183)
.|+.|+..+=+-+|
T Consensus 97 ~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 97 RGAKIVRQSHILSG 110 (201)
T ss_dssp TTCEEEECCCTTTT
T ss_pred CCCEEEEEeccccc
Confidence 89999877655544
No 136
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=23.24 E-value=1.8e+02 Score=23.05 Aligned_cols=84 Identities=15% Similarity=0.136 Sum_probs=53.0
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCC----CCCCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecC
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRID----TKVPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~----~~~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
-..+.+.|+..|++|+++ |... +..+ ++.+.++++.=.+--++....+++..+++++....|.+++-=-
T Consensus 252 ~~~~a~~l~~~G~d~i~v---~~~~~~~~~~~~----~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~igR~ 324 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHI---AEVDWDDAPDTP----VSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGFGRP 324 (365)
T ss_dssp HHHHHHHHHHTTCSEEEE---ECCBTTBCCCCC----HHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEECCHH
T ss_pred HHHHHHHHHHcCCCEEEE---eCCCcCCCCCcc----HHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehhcHH
Confidence 345667788888766665 4431 1112 3456667776677788888888999999999988899998433
Q ss_pred cc-cCCcHHHHhcCCe
Q 044886 140 LR-SRDVKEEMELGIG 154 (183)
Q Consensus 140 ~~-~~~~~~~~~~~i~ 154 (183)
++ +++....++.|..
T Consensus 325 ~i~~P~l~~~~~~g~~ 340 (365)
T 2gou_A 325 FIANPDLPERLRHGYP 340 (365)
T ss_dssp HHHCTTHHHHHHHTCC
T ss_pred HHhCchHHHHHHcCCC
Confidence 33 3322224444443
No 137
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=23.14 E-value=2.5e+02 Score=21.44 Aligned_cols=95 Identities=11% Similarity=0.111 Sum_probs=53.1
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCCCCC----CchHHHHHHHHhhCCC---CCCCCCHHHHHHHHHHHHHHcCCCCcce
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDVYGP----HTNEILLGKVIYEDGK---YSYCGDPAYLRAACEASLKRLDVDCIDL 81 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~----g~sE~~~g~~l~~~~k---~~~~~~~~~i~~~~~~sL~~lg~~~iDl 81 (183)
++.++..++++.+.+.|++.|.-. .|. ..-..+ -+.+++.+. .........+.+ .-+.|...|++++.+
T Consensus 50 ls~e~i~~~i~~~~~~g~~~i~~t--GGEPll~~~l~~l-i~~~~~~~~~~~i~i~TNG~ll~~-~~~~L~~~g~~~v~i 125 (340)
T 1tv8_A 50 LTFDEMARIAKVYAELGVKKIRIT--GGEPLMRRDLDVL-IAKLNQIDGIEDIGLTTNGLLLKK-HGQKLYDAGLRRINV 125 (340)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE--SSCGGGSTTHHHH-HHHHTTCTTCCEEEEEECSTTHHH-HHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEe--CCCccchhhHHHH-HHHHHhCCCCCeEEEEeCccchHH-HHHHHHHCCCCEEEE
Confidence 688999999999999999877633 120 011222 222333221 111111111223 344566667665542
Q ss_pred EEeccCCC--------CC-CHHHHHHHHHHHHHcCC
Q 044886 82 YDQHRIDT--------KV-PIEVTIGELKRLVEEGK 108 (183)
Q Consensus 82 ~~lh~~~~--------~~-~~~~~~~~l~~l~~~G~ 108 (183)
-|+..++ .. .++.+++.++.+++.|.
T Consensus 126 -Sld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 126 -SLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp -ECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred -ecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 3444432 12 58899999999999996
No 138
>3ose_A Serine/threonine-protein kinase MARK1; kinase associated-1(Ka1) domain, transferase, lipid binding membrane association; 1.70A {Homo sapiens} SCOP: d.129.6.1 PDB: 1ul7_A
Probab=22.99 E-value=55 Score=21.75 Aligned_cols=23 Identities=17% Similarity=0.130 Sum_probs=20.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCc
Q 044886 57 CGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 57 ~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
..+|+.|...|.+.|..+|++|-
T Consensus 36 ~~~P~eIm~eI~rvL~~~gi~~~ 58 (120)
T 3ose_A 36 SMDPNDMMREIRKVLDANNCDYE 58 (120)
T ss_dssp CSCHHHHHHHHHHHHHHTTCEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEE
Confidence 66899999999999999998643
No 139
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi}
Probab=22.91 E-value=1.1e+02 Score=25.71 Aligned_cols=46 Identities=17% Similarity=0.114 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 61 AYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 61 ~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
+...+.+.+.+++||+.+.+.+- .......++.+.+++|.+.|.+-
T Consensus 120 ~~~~~~f~~d~~~Lgi~~d~~~~----~~t~hi~~v~~~i~~L~~kG~aY 165 (501)
T 3sp1_A 120 EFFTEAFFNDCRKLNIVYPDKVL----VASKHIPIMIEVVKILEEKKITY 165 (501)
T ss_dssp HHHHHHHHHHHHHTTCCCCSEEE----EGGGCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCCCCCccc----CcchHHHHHHHHHHHHHHCCCEE
Confidence 55777888999999998777542 23456788999999999999984
No 140
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A*
Probab=22.91 E-value=1e+02 Score=25.45 Aligned_cols=48 Identities=6% Similarity=0.038 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 60 PAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 60 ~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
.+...+.+.+.+++||++ .|.+.. .......+.+.+.+++|.++|.|-
T Consensus 73 ~~~~~~~~~~~~~~lgi~-~d~~~~--t~~~~~~~~~~~~~~~L~~~G~iY 120 (497)
T 2csx_A 73 VDRNAERFKKLWEFLKIE-YTKFIR--TTDPYHVKFVQKVFEECYKRGDIY 120 (497)
T ss_dssp HHHHHHHHHHHHHHTTCC-CSEEEE--TTSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHhCCc-CCCCcc--CCCHHHHHHHHHHHHHHHHCCCEE
Confidence 355778888999999995 675432 211123567899999999999984
No 141
>3guv_A Site-specific recombinase, resolvase family prote; structural genomics, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae}
Probab=22.41 E-value=94 Score=21.33 Aligned_cols=49 Identities=6% Similarity=0.118 Sum_probs=28.0
Q ss_pred HHHHHHHHcCCCC--cceEEeccCCCCC-CHHHHHHHHHHHHHcCCccEEEec
Q 044886 66 ACEASLKRLDVDC--IDLYDQHRIDTKV-PIEVTIGELKRLVEEGKIKHIDLS 115 (183)
Q Consensus 66 ~~~~sL~~lg~~~--iDl~~lh~~~~~~-~~~~~~~~l~~l~~~G~ir~iG~s 115 (183)
.+.+.|+.+.... +|.+++...|.-. ...+++..++.|.+.| |+-+-+.
T Consensus 61 ~l~~ll~~~~~g~~~~d~lvv~~ldRl~R~~~~~~~~~~~l~~~g-v~l~~~~ 112 (167)
T 3guv_A 61 QFNRMMEDIKSGKDGVSFVLVFKLSRFARNAADVLSTLQIMQDYG-VNLICVE 112 (167)
T ss_dssp HHHHHHHHHHTCTTCCSEEEESCGGGTCSSHHHHHHHHHHHHHTT-CEEEETT
T ss_pred HHHHHHHHHHcCCCCccEEEEEeCchhcCCHHHHHHHHHHHHHCC-CEEEEee
Confidence 3444444443333 7888887776543 3556677777776665 4444444
No 142
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=22.24 E-value=3e+02 Score=21.92 Aligned_cols=139 Identities=9% Similarity=0.001 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CC-------CCCCCCHHHHHHHHHHHHHHcCCCCcceE
Q 044886 11 ESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GK-------YSYCGDPAYLRAACEASLKRLDVDCIDLY 82 (183)
Q Consensus 11 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k-------~~~~~~~~~i~~~~~~sL~~lg~~~iDl~ 82 (183)
.++..+..+.+.+.|++.|..--... ...+...-+++++. +. .....+.+...+ +-+.|+.++++
T Consensus 156 ~e~~~~~a~~~~~~G~~~iKlK~g~~-~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~-~~~~L~~~~i~----- 228 (392)
T 3ddm_A 156 PENPEDVVARKAAEGYRAFKLKVGFD-DARDVRNALHVRELLGAATPLMADANQGWDLPRARQ-MAQRLGPAQLD----- 228 (392)
T ss_dssp SSSHHHHHHHHHHHTCCCEEEECSSC-HHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHH-HHHHHGGGCCS-----
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCC-HHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHHH-HHHHHHHhCCC-----
Confidence 45677788888899999877432111 11233334455542 21 112334444332 33456666544
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHcCCccE-EEecCcCHHHHHHHhhcCCeeEEeeecCcccC--CcHH--HH--hcCCeE
Q 044886 83 DQHRIDTKVPIEVTIGELKRLVEEGKIKH-IDLSEAFASTIRRAHTIHPITVVRLEWSLRSR--DVKE--EM--ELGIGI 155 (183)
Q Consensus 83 ~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~--~~~~--~~--~~~i~v 155 (183)
++..|-+..+ .++.+.++++.-.|-- .|=+-++...++++++....+++|+..+-.-- +... .+ .+|+.+
T Consensus 229 ~iEeP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~ 305 (392)
T 3ddm_A 229 WLEEPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRY 305 (392)
T ss_dssp EEECCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEE
T ss_pred EEECCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEE
Confidence 3445533221 2667778877655543 23334788999999988889999997664321 1111 22 888888
Q ss_pred EEec
Q 044886 156 VAYN 159 (183)
Q Consensus 156 ~a~~ 159 (183)
+..+
T Consensus 306 ~~h~ 309 (392)
T 3ddm_A 306 CPHY 309 (392)
T ss_dssp CCEE
T ss_pred EecC
Confidence 6544
No 143
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=22.18 E-value=82 Score=19.44 Aligned_cols=25 Identities=16% Similarity=-0.037 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHcCCccEEEecCc
Q 044886 93 IEVTIGELKRLVEEGKIKHIDLSEA 117 (183)
Q Consensus 93 ~~~~~~~l~~l~~~G~ir~iG~s~~ 117 (183)
-.++=++|.+||++|+|-.=+=|.|
T Consensus 48 KKeVdKaik~LKkEgkI~SPkRCyw 72 (80)
T 2lnb_A 48 KRELNQVLYRMKKELKVSLTSPATW 72 (80)
T ss_dssp HHHHHHHHHHHHHTTSEEEEETTEE
T ss_pred HHHHHHHHHHHHHcCCccCCCCcee
Confidence 4677889999999999876655544
No 144
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=22.07 E-value=88 Score=18.05 Aligned_cols=20 Identities=25% Similarity=0.321 Sum_probs=16.9
Q ss_pred CHHHHHHHHHHHHHcCCccE
Q 044886 92 PIEVTIGELKRLVEEGKIKH 111 (183)
Q Consensus 92 ~~~~~~~~l~~l~~~G~ir~ 111 (183)
+-..+++.+..|+++|.|..
T Consensus 38 sr~tv~~~l~~L~~~G~I~~ 57 (67)
T 2heo_A 38 PKKTLNQVLYRLKKEDRVSS 57 (67)
T ss_dssp CHHHHHHHHHHHHHTTSEEE
T ss_pred CHHHHHHHHHHHHHCCcEec
Confidence 45678999999999999864
No 145
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=21.97 E-value=3e+02 Score=21.85 Aligned_cols=87 Identities=15% Similarity=0.009 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcCCCCcceEEeccCCCC--CCHHHHHHHHHHHHHcCCccEEEecCcCHHHHHHHhhcCCeeEEeeecC-c
Q 044886 64 RAACEASLKRLDVDCIDLYDQHRIDTK--VPIEVTIGELKRLVEEGKIKHIDLSEAFASTIRRAHTIHPITVVRLEWS-L 140 (183)
Q Consensus 64 ~~~~~~sL~~lg~~~iDl~~lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~~-~ 140 (183)
-..+.+.|+..|++++++ |..... .+....++.+.++++.=.+--++...++++..+++++....|.+++-=- +
T Consensus 258 ~~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~aD~V~~gR~~l 334 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFI 334 (376)
T ss_dssp HHHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCCcEEeecHHHH
Confidence 455677788888666555 443211 0101123445666666567777777788899999999988899988433 3
Q ss_pred ccCCcHHHHhcCC
Q 044886 141 RSRDVKEEMELGI 153 (183)
Q Consensus 141 ~~~~~~~~~~~~i 153 (183)
.+++....++.|.
T Consensus 335 ~~P~l~~k~~~g~ 347 (376)
T 1icp_A 335 SNPDLPKRFELNA 347 (376)
T ss_dssp HCTTHHHHHHHTC
T ss_pred hCccHHHHHHcCC
Confidence 3433333444443
No 146
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=21.79 E-value=85 Score=18.83 Aligned_cols=21 Identities=19% Similarity=0.173 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHcCCccEEE
Q 044886 93 IEVTIGELKRLVEEGKIKHID 113 (183)
Q Consensus 93 ~~~~~~~l~~l~~~G~ir~iG 113 (183)
...+-..|.+|+++|+|...|
T Consensus 45 ~~tV~~~L~~L~~~G~I~~~g 65 (77)
T 1qgp_A 45 KKEINRVLYSLAKKGKLQKEA 65 (77)
T ss_dssp HHHHHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEecC
Confidence 456788999999999999988
No 147
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=21.74 E-value=2.9e+02 Score=21.56 Aligned_cols=140 Identities=15% Similarity=0.034 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhCC-C--C----CCCCCHHHHHHHHHHHHHHcCCCCcceE
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYEDG-K--Y----SYCGDPAYLRAACEASLKRLDVDCIDLY 82 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~~-k--~----~~~~~~~~i~~~~~~sL~~lg~~~iDl~ 82 (183)
+.++..+..+.+.+.|++.|..-- +.......+ +++++.- . . ....+.+. .+ +-+.|+.++++
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~~~~~l~vDan~~~~~~~-~~-~~~~l~~~~i~----- 210 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAFPEATLTADANSAYSLAN-LA-QLKRLDELRLD----- 210 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCTTSCEEEECTTCCCGGG-HH-HHHGGGGGCCS-----
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHcCCCeEEEecCCCCCHHH-HH-HHHHHHhCCCc-----
Confidence 567778888888999999876421 211223333 4444321 1 0 11234444 22 33345655544
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCeE
Q 044886 83 DQHRIDTKVPIEVTIGELKRLVEEGKIKHIDL-SEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIGI 155 (183)
Q Consensus 83 ~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~v 155 (183)
++..|-+. +.++.+.+++++-.|--.+- +-++...++++++....+++|+..+..-.- ... .+ ++|+.+
T Consensus 211 ~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 286 (369)
T 2zc8_A 211 YIEQPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLRVHALAESAGIPL 286 (369)
T ss_dssp CEECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCE
T ss_pred EEECCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHHHHHHHHHcCCcE
Confidence 44455332 22566777777655543322 337889999999988899999976653211 111 23 889996
Q ss_pred EEeccCCc
Q 044886 156 VAYNLLEC 163 (183)
Q Consensus 156 ~a~~~l~~ 163 (183)
++.+-+.+
T Consensus 287 ~~~~~~es 294 (369)
T 2zc8_A 287 WMGGMLEA 294 (369)
T ss_dssp EECCCCCC
T ss_pred EecCcccc
Confidence 66655544
No 148
>1zat_A L,D-transpeptidase; L,D-transpeptidation, peptidoglycan, beta-lactam insensitive transpeptidase, antibiotic resistance, transferase; 2.40A {Enterococcus faecium} SCOP: b.160.1.1 d.335.1.1 PDB: 2hkl_A
Probab=21.73 E-value=39 Score=25.24 Aligned_cols=34 Identities=15% Similarity=0.084 Sum_probs=26.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCCeEeCcCCCC
Q 044886 2 SAFYGPSKPESGMIALTNHAIDSGINVLDTSDVYG 36 (183)
Q Consensus 2 ~~~~g~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg 36 (183)
+|.||+.++.++..+.|..|+..|=... ..+.|.
T Consensus 81 ~g~yGw~id~~~~~~~l~~al~~g~~~~-~~p~~~ 114 (250)
T 1zat_A 81 VGTYSWTIQTDSETEALKKAILAGQDFT-RSPIVQ 114 (250)
T ss_dssp CCSSCEEECHHHHHHHHHHHHHHTSCEE-ECCCEE
T ss_pred CCcceeEECHHHHHHHHHHHHHcCCCce-eccccc
Confidence 4789999999999999999999985443 345554
No 149
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=21.70 E-value=2.9e+02 Score=21.61 Aligned_cols=140 Identities=14% Similarity=0.065 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCchHHHHHHHHhhC-CCC------CCCCCHHHHHHHHHHHHHHcCCCCcceE
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTNEILLGKVIYED-GKY------SYCGDPAYLRAACEASLKRLDVDCIDLY 82 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~sE~~~g~~l~~~-~k~------~~~~~~~~i~~~~~~sL~~lg~~~iDl~ 82 (183)
+.++..+..+.+.+.|++.|..-- +.......+ +++++. ... ....+.+. . .+-+.|+.++++
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~~~~~l~vDan~~~~~~~-~-~~~~~l~~~~i~----- 217 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAFPDIRLTVDANSAYTLAD-A-GRLRQLDEYDLT----- 217 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCTTSCEEEECTTCCCGGG-H-HHHHTTGGGCCS-----
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHcCCCeEEEeCCCCCCHHH-H-HHHHHHHhCCCc-----
Confidence 567778888889999999876421 211223333 444432 110 11234444 2 233335555544
Q ss_pred EeccCCCCCCHHHHHHHHHHHHHcCCccEEEe-cCcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcCCeE
Q 044886 83 DQHRIDTKVPIEVTIGELKRLVEEGKIKHIDL-SEAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELGIGI 155 (183)
Q Consensus 83 ~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~i~v 155 (183)
++..|-+. +.++.+.+++++-.|--.+- +-++...++++++....+++|+..+..-.- ... .+ .+|+.+
T Consensus 218 ~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~ 293 (375)
T 1r0m_A 218 YIEQPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRVHDVAQSFGAPV 293 (375)
T ss_dssp CEECCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHHHHHHHHTTCCE
T ss_pred EEECCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHHHHHHHHcCCcE
Confidence 44455332 23666777777654433222 237889999999998899999987654321 111 23 889996
Q ss_pred EEeccCCc
Q 044886 156 VAYNLLEC 163 (183)
Q Consensus 156 ~a~~~l~~ 163 (183)
++.+-+.+
T Consensus 294 ~~~~~~es 301 (375)
T 1r0m_A 294 WCGGMLES 301 (375)
T ss_dssp EECCCCCC
T ss_pred EecCcccc
Confidence 66554443
No 150
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A*
Probab=21.57 E-value=1.1e+02 Score=25.57 Aligned_cols=47 Identities=17% Similarity=0.262 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 61 AYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 61 ~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
+...+.+.+.+++||++ .|.+. ........+.+.+.+.+|.++|.|-
T Consensus 78 ~~~~~~~~~~~~~lgi~-~D~~~--~T~~~~~~~~v~~~f~~L~~~G~iy 124 (542)
T 3u1f_A 78 TAVAGEFKKCFEQMDYS-IDYFI--RTTNEQHKAVVKELWTKLEQKGDIY 124 (542)
T ss_dssp HHHHHHHHHHHHHHTCC-CSEEE--ETTCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHhCCc-cCcCc--cCCCHHHHHHHHHHHHHHhhcCcEE
Confidence 44567788899999996 47653 2222223456789999999999984
No 151
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=21.54 E-value=3.2e+02 Score=21.99 Aligned_cols=87 Identities=10% Similarity=-0.007 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcC------CCCcceEEeccCCCC----CC-----HH-HHHHHHHHHHHcCCccEEEecCcCHHHHHHHhh
Q 044886 64 RAACEASLKRLD------VDCIDLYDQHRIDTK----VP-----IE-VTIGELKRLVEEGKIKHIDLSEAFASTIRRAHT 127 (183)
Q Consensus 64 ~~~~~~sL~~lg------~~~iDl~~lh~~~~~----~~-----~~-~~~~~l~~l~~~G~ir~iG~s~~~~~~l~~~~~ 127 (183)
-..+.+.|+..| +++++ +|..... .+ .. .-++.+.++++.=.+--|+....+++..+++++
T Consensus 262 ~~~la~~le~~G~~gg~~vd~i~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i~~~~a~~~l~ 338 (402)
T 2hsa_B 262 GLAVVERLNKIQLHSGSKLAYLH---VTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGYTRELGIEAVA 338 (402)
T ss_dssp HHHHHHHHHHHHHHHTSCCSEEE---EECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccCCceEEEE---EecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHH
Confidence 345667777777 55555 4543211 11 11 246777888888778888888888999999999
Q ss_pred cCCeeEEeeec-CcccCCcHHHHhcCC
Q 044886 128 IHPITVVRLEW-SLRSRDVKEEMELGI 153 (183)
Q Consensus 128 ~~~~~~~q~~~-~~~~~~~~~~~~~~i 153 (183)
....|.|++-= .+.+++....++.|.
T Consensus 339 ~g~aD~V~igR~~l~dP~l~~k~~~g~ 365 (402)
T 2hsa_B 339 QGDADLVSYGRLFISNPDLVMRIKLNA 365 (402)
T ss_dssp TTSCSEEEESHHHHHCTTHHHHHHHTC
T ss_pred CCCCceeeecHHHHhCchHHHHHHhCC
Confidence 98889999843 344444333554343
No 152
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=21.38 E-value=1.6e+02 Score=18.56 Aligned_cols=60 Identities=7% Similarity=-0.081 Sum_probs=36.4
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
..+|++++...-+..+ .++.+.++++. ..+.-|-+++. +......+.+....+++.-+++
T Consensus 61 ~~~dlvi~D~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~ 124 (149)
T 1k66_A 61 PRPAVILLDLNLPGTD---GREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLE 124 (149)
T ss_dssp CCCSEEEECSCCSSSC---HHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS
T ss_pred CCCcEEEEECCCCCCC---HHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCC
Confidence 4589998876544333 34555566654 46777888774 4556666666655566555444
No 153
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=21.24 E-value=81 Score=26.52 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=21.1
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCeE
Q 044886 6 GPSKPESGMIALTNHAIDSGINVL 29 (183)
Q Consensus 6 g~~~~~~~~~~~l~~A~~~Gi~~~ 29 (183)
|...++++..++++.|-+.||++|
T Consensus 225 ~g~YT~~di~eiv~yA~~rgI~VI 248 (512)
T 1jak_A 225 GGYYTKAEYKEIVRYAASRHLEVV 248 (512)
T ss_dssp CCCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 344689999999999999999985
No 154
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=21.23 E-value=1.1e+02 Score=25.60 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHcCCcc
Q 044886 61 AYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEEGKIK 110 (183)
Q Consensus 61 ~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 110 (183)
+.+.+.+.+.+++||++ .|.+. +.........+.+.+++|++.|.+-
T Consensus 94 ~~~~~~~~~~l~~lgi~-~d~~~--~t~~~~~~~~v~~~~~~L~~~G~iY 140 (536)
T 4dlp_A 94 DRNTSAFRRMAEVLNSS-NDDYI--RTSEERHYKASQAIWQAMVANGDIY 140 (536)
T ss_dssp HHHHHHHHHHHHHTTCC-CSEEE--ETTSHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCC-CCcce--eCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 45778889999999997 56442 2221123567889999999999984
No 155
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=21.11 E-value=1.3e+02 Score=20.50 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=23.5
Q ss_pred CCCHHHHHHHHHHHHHcCCccEEEecC
Q 044886 90 KVPIEVTIGELKRLVEEGKIKHIDLSE 116 (183)
Q Consensus 90 ~~~~~~~~~~l~~l~~~G~ir~iG~s~ 116 (183)
..+..-++..|+.|.+.|.|+.+-+.+
T Consensus 58 ~is~aTVYR~L~~L~e~Glv~~~~~~~ 84 (150)
T 2xig_A 58 NTSISSVYRILNFLEKENFISVLETSK 84 (150)
T ss_dssp TCCHHHHHHHHHHHHHTTSEEEEEETT
T ss_pred CCCHhhHHHHHHHHHHCCcEEEEEeCC
Confidence 355778999999999999999998865
No 156
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=20.83 E-value=2.7e+02 Score=21.89 Aligned_cols=44 Identities=9% Similarity=0.081 Sum_probs=24.9
Q ss_pred CCHHHHHHHHHHHHHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHH
Q 044886 58 GDPAYLRAACEASLKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLV 104 (183)
Q Consensus 58 ~~~~~i~~~~~~sL~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~ 104 (183)
.+++.+.+++++-.+.+|++. ++++.+....+.++..+.|+.+-
T Consensus 309 Gtpe~va~~l~~~~~~~G~d~---~~l~~~~~~~~~~~~~~~l~~~a 352 (376)
T 2i7g_A 309 GEPELVAEKIIKAHGVFKNDR---FLLQMAIGLMPHDQIMRGIELYG 352 (376)
T ss_dssp ESHHHHHHHHHHHHHHHCCSE---EEEECCCTTCCHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHhcCCCe---EEEEeCCCCCCHHHHHHHHHHHH
Confidence 477888888888777777554 44443332234444444444433
No 157
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=20.75 E-value=3.2e+02 Score=21.65 Aligned_cols=138 Identities=9% Similarity=0.007 Sum_probs=81.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCcCCCCCCch--HHHHHHHHhhC-CC-C------CCCCCHHHHHHHHHHHHHHcCCCCc
Q 044886 10 PESGMIALTNHAIDSGINVLDTSDVYGPHTN--EILLGKVIYED-GK-Y------SYCGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 10 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~s--E~~~g~~l~~~-~k-~------~~~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
+.++..+..+.+.+.|++.|..- -|.+.. ...+-+++++. +. . ....+.+...+-++ .|+.++++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik--~g~~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~-~l~~~~i~~i 238 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLK--VGQPDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCR-IFEPFNLVWI 238 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEE--CCCSCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHH-HHGGGCCSCE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe--cCCCCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHH-HHHhhCCCEE
Confidence 67888888899999999988742 121121 22223455432 21 1 12446666555443 3777776544
Q ss_pred ceEEeccCCCCCCHHHHHHHHHHHHHcCCccEEEec-CcCHHHHHHHhhcCCeeEEeeecCcccCC-cHH---HH--hcC
Q 044886 80 DLYDQHRIDTKVPIEVTIGELKRLVEEGKIKHIDLS-EAFASTIRRAHTIHPITVVRLEWSLRSRD-VKE---EM--ELG 152 (183)
Q Consensus 80 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG~s-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~---~~--~~~ 152 (183)
..|-+. +.++.+.++++.-.|--.+-- .++.+.++++++....+++|+..+-.--- ... .+ .+|
T Consensus 239 -----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g 309 (393)
T 2og9_A 239 -----EEPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAG 309 (393)
T ss_dssp -----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTT
T ss_pred -----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcC
Confidence 344222 236777788777655544433 36789999999988899999876543211 111 22 778
Q ss_pred CeEEEec
Q 044886 153 IGIVAYN 159 (183)
Q Consensus 153 i~v~a~~ 159 (183)
+.++..+
T Consensus 310 i~~~~h~ 316 (393)
T 2og9_A 310 LMLAPHF 316 (393)
T ss_dssp CEECCCS
T ss_pred CEEeccC
Confidence 8776554
No 158
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=20.66 E-value=3e+02 Score=21.40 Aligned_cols=94 Identities=10% Similarity=0.045 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCcCC--CCCCchHHHHHHHH---hhCCC-C--CC-CCCHHHHHHHHHHHHHHcCCCCc
Q 044886 9 KPESGMIALTNHAIDSGINVLDTSDV--YGPHTNEILLGKVI---YEDGK-Y--SY-CGDPAYLRAACEASLKRLDVDCI 79 (183)
Q Consensus 9 ~~~~~~~~~l~~A~~~Gi~~~DtA~~--Yg~g~sE~~~g~~l---~~~~k-~--~~-~~~~~~i~~~~~~sL~~lg~~~i 79 (183)
++.++..+.++.+.+.|++.|--.-. ++....-..+.+.+ ++.+. + .. ..+.+ .-+.|+..|++++
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~l~~e-----~l~~L~~aGvd~v 173 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGTLSES-----QAQRLANAGLDYY 173 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSSCCHH-----HHHHHHHHCCCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCCHH-----HHHHHHHCCCCEE
Confidence 67888888888888889875432211 12111222333333 33221 1 11 12222 2233555565543
Q ss_pred ceEEeccC-------CCCCCHHHHHHHHHHHHHcCC
Q 044886 80 DLYDQHRI-------DTKVPIEVTIGELKRLVEEGK 108 (183)
Q Consensus 80 Dl~~lh~~-------~~~~~~~~~~~~l~~l~~~G~ 108 (183)
.+=+ ... .....+++++++++.+++.|.
T Consensus 174 ~i~l-es~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi 208 (369)
T 1r30_A 174 NHNL-DTSPEFYGNIITTRTYQERLDTLEKVRDAGI 208 (369)
T ss_dssp ECCC-BSCHHHHHHHCCSSCHHHHHHHHHHHHHHHC
T ss_pred eecC-cCCHHHHHHhCCCCCHHHHHHHHHHHHHcCC
Confidence 3211 110 112356788888888888876
No 159
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=20.33 E-value=1.4e+02 Score=20.01 Aligned_cols=28 Identities=18% Similarity=0.355 Sum_probs=24.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCccEEEecC
Q 044886 89 TKVPIEVTIGELKRLVEEGKIKHIDLSE 116 (183)
Q Consensus 89 ~~~~~~~~~~~l~~l~~~G~ir~iG~s~ 116 (183)
+..+..-+++.|+.|.+.|.|+.+-+.+
T Consensus 44 ~~is~aTVYR~L~~L~e~Glv~~~~~~~ 71 (139)
T 3mwm_A 44 DAVGLTTVYRTLQSLADAGEVDVLRTAE 71 (139)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSEEEECTT
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3466788999999999999999998854
No 160
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=20.19 E-value=1.7e+02 Score=18.20 Aligned_cols=60 Identities=15% Similarity=0.003 Sum_probs=36.9
Q ss_pred CCcceEEeccCCCCCCHHHHHHHHHHHHHc---CCccEEEecCc-CHHHHHHHhhcCCeeEEeeecC
Q 044886 77 DCIDLYDQHRIDTKVPIEVTIGELKRLVEE---GKIKHIDLSEA-FASTIRRAHTIHPITVVRLEWS 139 (183)
Q Consensus 77 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iG~s~~-~~~~l~~~~~~~~~~~~q~~~~ 139 (183)
..+|++++...-+..+ .++.++++++. ..+.-|-+++. +.+...++.+..-.+++.-+++
T Consensus 54 ~~~dlvi~d~~~~~~~---g~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~ 117 (140)
T 1k68_A 54 SRPDLILLXLNLPKKD---GREVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSAN 117 (140)
T ss_dssp CCCSEEEECSSCSSSC---HHHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSS
T ss_pred CCCcEEEEecCCCccc---HHHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCC
Confidence 5689999876544333 34555666665 35777888874 4556666666655555555444
No 161
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=20.13 E-value=3.4e+02 Score=21.76 Aligned_cols=92 Identities=12% Similarity=-0.066 Sum_probs=57.7
Q ss_pred HHHcCCCCcceEEeccCCCCCCHHHHHHHHHHHHHc-----CCc-cEEEecCcCHHHHHHHhhcCCeeEEeeecCcccCC
Q 044886 71 LKRLDVDCIDLYDQHRIDTKVPIEVTIGELKRLVEE-----GKI-KHIDLSEAFASTIRRAHTIHPITVVRLEWSLRSRD 144 (183)
Q Consensus 71 L~~lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iG~s~~~~~~l~~~~~~~~~~~~q~~~~~~~~~ 144 (183)
|+..+.. +++ ++-.|-+.....+-++.+.+|.++ -.| -..|=+.++...+.++++....+++|+..+-+-.-
T Consensus 261 L~~~~~~-~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGi 338 (413)
T 1kko_A 261 LEKEAQG-LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGI 338 (413)
T ss_dssp TGGGGTT-SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEECGGGGSST
T ss_pred HHhccCC-cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeCccccCCH
Confidence 4444432 554 666664322224567888888776 333 22333347889999999998899999988764322
Q ss_pred cHH----HH--hcCCeEEEeccC-Ccc
Q 044886 145 VKE----EM--ELGIGIVAYNLL-ECE 164 (183)
Q Consensus 145 ~~~----~~--~~~i~v~a~~~l-~~G 164 (183)
.+. .+ ++|+.++..+.. ..+
T Consensus 339 tea~~i~~~A~~~gi~~~~~~~~~et~ 365 (413)
T 1kko_A 339 HNIVDAVLYCNKHGMEAYQGGTCNETE 365 (413)
T ss_dssp HHHHHHHHHHHHHTCEEEECCCTTSCH
T ss_pred HHHHHHHHHHHHcCCeEEecCCCCCCH
Confidence 111 23 899999988764 444
No 162
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=20.13 E-value=1.2e+02 Score=18.57 Aligned_cols=58 Identities=10% Similarity=-0.113 Sum_probs=29.4
Q ss_pred CcceEEeccCCC-CCCHHHHHHHHHHHHHc---CCccEEEecCcCHHHHHHHhhcCCeeEEeeec
Q 044886 78 CIDLYDQHRIDT-KVPIEVTIGELKRLVEE---GKIKHIDLSEAFASTIRRAHTIHPITVVRLEW 138 (183)
Q Consensus 78 ~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~---G~ir~iG~s~~~~~~l~~~~~~~~~~~~q~~~ 138 (183)
.+|++++...-+ ..+ .++.++++++. ..+.-|-++..+......+.+..-.+++.-++
T Consensus 49 ~~dlvi~d~~~~~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kp~ 110 (127)
T 2gkg_A 49 RPDLVVLAVDLSAGQN---GYLICGKLKKDDDLKNVPIVIIGNPDGFAQHRKLKAHADEYVAKPV 110 (127)
T ss_dssp CCSEEEEESBCGGGCB---HHHHHHHHHHSTTTTTSCEEEEECGGGHHHHHHSTTCCSEEEESSC
T ss_pred CCCEEEEeCCCCCCCC---HHHHHHHHhcCccccCCCEEEEecCCchhHHHHHHhCcchheeCCC
Confidence 367887765433 222 24455555554 45556666333444555555554444544443
No 163
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=20.01 E-value=4.2e+02 Score=24.32 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=31.9
Q ss_pred ceEEeccCCCCCC---HHHHHHHHHHHHHcCCccEEEecCcCHHHHH
Q 044886 80 DLYDQHRIDTKVP---IEVTIGELKRLVEEGKIKHIDLSEAFASTIR 123 (183)
Q Consensus 80 Dl~~lh~~~~~~~---~~~~~~~l~~l~~~G~ir~iG~s~~~~~~l~ 123 (183)
++|.|..|....+ .+.+++.|.+|++.|. .+=+.+|+.+.+.
T Consensus 526 ~llILDEPTagLdp~~~~~L~~~L~~Lr~~G~--TVIvVeHdl~~i~ 570 (972)
T 2r6f_A 526 VLYVLDEPSIGLHQRDNDRLIATLKSMRDLGN--TLIVVEHDEDTML 570 (972)
T ss_dssp CEEEEECTTTTCCGGGHHHHHHHHHHHHTTTC--EEEEECCCHHHHH
T ss_pred CEEEEeCcccCCCHHHHHHHHHHHHHHHhCCC--EEEEEecCHHHHH
Confidence 5777777765544 5678999999998886 7778888887764
Done!