Query 044891
Match_columns 233
No_of_seqs 177 out of 1285
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 13:32:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 7.9E-56 2.7E-60 403.5 18.1 205 4-209 121-351 (356)
2 1w9y_A 1-aminocyclopropane-1-c 100.0 7.1E-56 2.4E-60 398.5 16.2 214 6-223 72-316 (319)
3 3oox_A Putative 2OG-Fe(II) oxy 100.0 6.1E-53 2.1E-57 378.0 17.9 199 4-203 75-309 (312)
4 1odm_A Isopenicillin N synthas 100.0 3.3E-50 1.1E-54 363.0 15.7 183 18-204 96-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2.7E-50 9.1E-55 361.0 13.3 194 3-205 72-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 5.4E-46 1.8E-50 328.7 16.3 176 3-203 64-277 (280)
7 2iuw_A Alkylated repair protei 92.2 0.82 2.8E-05 38.5 9.4 92 61-165 119-229 (238)
8 3tht_A Alkylated DNA repair pr 91.1 1.1 3.6E-05 40.1 9.3 120 40-168 171-315 (345)
9 2hbt_A EGL nine homolog 1; pro 91.0 1.3 4.4E-05 37.5 9.4 81 69-165 118-212 (247)
10 3s57_A Alpha-ketoglutarate-dep 90.5 1.6 5.4E-05 35.9 9.3 90 59-163 91-200 (204)
11 3i3q_A Alpha-ketoglutarate-dep 90.5 2.8 9.5E-05 34.7 10.8 109 37-164 75-201 (211)
12 3dkq_A PKHD-type hydroxylase S 89.8 0.82 2.8E-05 38.8 7.1 80 68-165 99-194 (243)
13 2rg4_A Uncharacterized protein 85.3 2.1 7.3E-05 35.3 6.9 43 114-168 166-209 (216)
14 3itq_A Prolyl 4-hydroxylase, a 69.1 22 0.00075 29.2 8.3 88 67-165 110-211 (216)
15 2jig_A Prolyl-4 hydroxylase; h 67.3 6.1 0.00021 32.3 4.5 90 68-167 98-218 (224)
16 1e5r_A Proline oxidase; oxidor 47.5 54 0.0019 28.3 7.3 65 86-164 103-175 (290)
17 3kt7_A PKHD-type hydroxylase T 27.2 2.4E+02 0.0081 27.0 8.6 93 57-165 108-227 (633)
18 2vf9_A Coat protein; virion, R 22.2 19 0.00066 26.1 0.1 18 134-151 49-66 (131)
19 2ww6_A Fibritin, T4 fibritin; 20.8 61 0.0021 17.8 1.9 13 108-120 12-24 (27)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=7.9e-56 Score=403.55 Aligned_cols=205 Identities=28% Similarity=0.525 Sum_probs=185.5
Q ss_pred CccccccCccCCCcCCCCceeeeeccccCCCCCCCCCCCCCCchhHHHHHHHH----------------------HHHHh
Q 044891 4 DLEGFGQAYVLSEEQKFVWGDGFIMTTLPVNLRKPHLFPKLPLPLRFSLCLFL----------------------EEMKN 61 (233)
Q Consensus 4 ~~~GY~~~~~~~~~~~~dw~E~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~----------------------~~~~~ 61 (233)
.++||+........++.||+|+|++...|.....+|.||+.+++||+++++|+ ++|.+
T Consensus 121 ~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 200 (356)
T 1gp6_A 121 KIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEK 200 (356)
T ss_dssp BCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHH
T ss_pred CccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 57899887665666789999999998877544678999999999999999999 34556
Q ss_pred hcc---CCcceEEEeecCCCCCCcCccccccccCCCCcEEEEecCCCCceEEeECCeEEEeecCCCeEEEcchhhhhhhh
Q 044891 62 FFE---NGLQVMRMNYYPPCPQPEKVAGLTPHSDGCGLTILLQINEVEGLQIKKDGMWIPLTPLPNAFLVNVGDIMEIIT 138 (233)
Q Consensus 62 ~~~---~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~v~GLqV~~~g~W~~v~p~~~~lvvnvGd~l~~~T 138 (233)
++. .+.+.||++|||||++++..+|+++|||+|+||||+|| +++||||+++|+|++|+|++|+|||||||+||+||
T Consensus 201 ~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~T 279 (356)
T 1gp6_A 201 EVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILS 279 (356)
T ss_dssp HTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC-SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred HhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc-CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhc
Confidence 665 36788999999999998888999999999999999995 79999999999999999999999999999999999
Q ss_pred CCeecCcCcccccCCCCCeeEEEEeeecCCCe-EEecCCcccCCCCCCCCCCccHHHHHHHHHhhhcCCCcc
Q 044891 139 NGKYRSIEHRATVNSVQERLSVGTFYYTRYDG-EVYPASSLISEKAPALFRRLTVEEYLSGRFARELRGKSY 209 (233)
Q Consensus 139 nG~~ks~~HRVv~~~~~~R~S~~~F~~P~~d~-~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~g~~~ 209 (233)
||+|||+.|||+++++++|+|++||++|+.|+ +|+|+++|+++++|++|+++|++||+..+++++++|+..
T Consensus 280 nG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~~~ 351 (356)
T 1gp6_A 280 NGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEELV 351 (356)
T ss_dssp TTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHHC-
T ss_pred CCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcchh
Confidence 99999999999998889999999999999999 999999999999999999999999999999888766543
No 2
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=7.1e-56 Score=398.54 Aligned_cols=214 Identities=29% Similarity=0.573 Sum_probs=180.1
Q ss_pred cccccCccCCCcCCCCceeeeeccccCCCCCCCCCCCCCCchhHHHHHHHH----------------------HHHHhhc
Q 044891 6 EGFGQAYVLSEEQKFVWGDGFIMTTLPVNLRKPHLFPKLPLPLRFSLCLFL----------------------EEMKNFF 63 (233)
Q Consensus 6 ~GY~~~~~~~~~~~~dw~E~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~----------------------~~~~~~~ 63 (233)
.||+.. ..+.++.||+|+|++...|. ..+|.||+.+++||+++++|+ ++|.+.+
T Consensus 72 ~Gy~~~--~~e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 147 (319)
T 1w9y_A 72 KALEGV--QAEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAF 147 (319)
T ss_dssp HHHTTC--CCCGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHH
T ss_pred CCCCcc--cccCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHh
Confidence 366543 23446889999999988764 357899999999999999999 3455555
Q ss_pred cC---CcceEEEeecCCCCCCcCccccccccCCCCcEEEEecCCCCceEEeECCeEEEeecCCCeEEEcchhhhhhhhCC
Q 044891 64 EN---GLQVMRMNYYPPCPQPEKVAGLTPHSDGCGLTILLQINEVEGLQIKKDGMWIPLTPLPNAFLVNVGDIMEIITNG 140 (233)
Q Consensus 64 ~~---~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~v~GLqV~~~g~W~~v~p~~~~lvvnvGd~l~~~TnG 140 (233)
.. +.+.||++|||||++++..+|+++|||+|+||||+||++++||||+++|+|++|+|++|++||||||+||+||||
T Consensus 148 ~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG 227 (319)
T 1w9y_A 148 YGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNG 227 (319)
T ss_dssp HTTTCCEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTT
T ss_pred cCcCCccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCC
Confidence 52 457899999999999988999999999999999999657999999999999999999999999999999999999
Q ss_pred eecCcCcccccCCCCCeeEEEEeeecCCCeEEecCCcccCCC---CCCCCCCccHHHHHHHHHhhhcCCCcc-cchhccc
Q 044891 141 KYRSIEHRATVNSVQERLSVGTFYYTRYDGEVYPASSLISEK---APALFRRLTVEEYLSGRFARELRGKSY-LDWWLLN 216 (233)
Q Consensus 141 ~~ks~~HRVv~~~~~~R~S~~~F~~P~~d~~i~pl~~~v~~~---~p~~y~~~~~~ey~~~~~~~~~~g~~~-~d~~k~~ 216 (233)
+|||+.|||+++++++|+|++||++|+.|++|+|+++|++++ +|++|++++++||+..+++..+.++.. ++.+|+.
T Consensus 228 ~~kS~~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~~ 307 (319)
T 1w9y_A 228 KYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKAM 307 (319)
T ss_dssp SSCCCCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHHC
T ss_pred eeecccceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHHHH
Confidence 999999999999889999999999999999999999999987 599999999999999999999888864 7888876
Q ss_pred --cCCCCCC
Q 044891 217 --ELSNQPI 223 (233)
Q Consensus 217 --~~~~~~~ 223 (233)
..+.+||
T Consensus 308 ~~~~~~~~~ 316 (319)
T 1w9y_A 308 ETDVKMDPI 316 (319)
T ss_dssp ---------
T ss_pred hhhcccCCc
Confidence 2344554
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=6.1e-53 Score=378.02 Aligned_cols=199 Identities=23% Similarity=0.387 Sum_probs=169.0
Q ss_pred CccccccCccC--CCcCCCCceeeeecccc-CCC-----CCCCCCCCCCCchhHHHHHHHH-------------------
Q 044891 4 DLEGFGQAYVL--SEEQKFVWGDGFIMTTL-PVN-----LRKPHLFPKLPLPLRFSLCLFL------------------- 56 (233)
Q Consensus 4 ~~~GY~~~~~~--~~~~~~dw~E~~~~~~~-p~~-----~~~~n~WP~~~~~fr~~~~~y~------------------- 56 (233)
..+||...... ......||+|.|.++.. +.. ...+|.||+.+|+||+++++|+
T Consensus 75 ~~~Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lg 154 (312)
T 3oox_A 75 GARGYIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLK 154 (312)
T ss_dssp GTSEEECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CccccccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 45788543322 23457899999998652 211 2357999999999999999999
Q ss_pred ---HHHHhhccCCcceEEEeecCCCCCCcCccccccccCCCCcEEEEecCCCCceEEe-ECCeEEEeecCCCeEEEcchh
Q 044891 57 ---EEMKNFFENGLQVMRMNYYPPCPQPEKVAGLTPHSDGCGLTILLQINEVEGLQIK-KDGMWIPLTPLPNAFLVNVGD 132 (233)
Q Consensus 57 ---~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~~lTlL~qd~~v~GLqV~-~~g~W~~v~p~~~~lvvnvGd 132 (233)
++|.+.+..+.+.||++|||||++++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|++|++||||||
T Consensus 155 l~~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD 233 (312)
T 3oox_A 155 LERDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGD 233 (312)
T ss_dssp SCTTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECH
T ss_pred cCHHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHH
Confidence 2345556667789999999999976555999999999999999995 79999998 799999999999999999999
Q ss_pred hhhhhhCCeecCcCcccccCC----CCCeeEEEEeeecCCCeEEecCCcccCCCCCCCCC-CccHHHHHHHHHhhh
Q 044891 133 IMEIITNGKYRSIEHRATVNS----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALFR-RLTVEEYLSGRFARE 203 (233)
Q Consensus 133 ~l~~~TnG~~ks~~HRVv~~~----~~~R~S~~~F~~P~~d~~i~pl~~~v~~~~p~~y~-~~~~~ey~~~~~~~~ 203 (233)
+||+||||+|||+.|||+.++ ..+|+|++||++|+.|++|+|+++|+++++|++|+ +++++||+..+++..
T Consensus 234 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 234 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp HHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred HHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999999999998763 46799999999999999999999999999999999 999999999988754
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=3.3e-50 Score=363.04 Aligned_cols=183 Identities=18% Similarity=0.207 Sum_probs=162.6
Q ss_pred CCCCceeeeeccccCCC----------CCCCCCCCCC--CchhHHHHHHHH----------------------HHHHhhc
Q 044891 18 QKFVWGDGFIMTTLPVN----------LRKPHLFPKL--PLPLRFSLCLFL----------------------EEMKNFF 63 (233)
Q Consensus 18 ~~~dw~E~~~~~~~p~~----------~~~~n~WP~~--~~~fr~~~~~y~----------------------~~~~~~~ 63 (233)
++.||+|+|++...+.. ...+|.||+. +|+||+++++|+ ++|.+.+
T Consensus 96 ~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~ 175 (331)
T 1odm_A 96 GKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSALLKGYALALGKEENFFARHF 175 (331)
T ss_dssp TTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTGGGC
T ss_pred CCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHh
Confidence 57899999999864311 2458999987 899999999999 2344555
Q ss_pred cCCcceEE--EeecC------C---CCCCcC-ccccccccCCCCcEEEEecCCCCceEEe-ECCeEEEeecCCCeEEEcc
Q 044891 64 ENGLQVMR--MNYYP------P---CPQPEK-VAGLTPHSDGCGLTILLQINEVEGLQIK-KDGMWIPLTPLPNAFLVNV 130 (233)
Q Consensus 64 ~~~~~~lr--~~~Yp------p---~~~~~~-~~g~~~HtD~~~lTlL~qd~~v~GLqV~-~~g~W~~v~p~~~~lvvnv 130 (233)
..+.+.|| ++||| | |++++. .+|+++|||+|+||||+|| +++||||+ ++| |++|+|++|++||||
T Consensus 176 ~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~~~g-Wi~V~p~pgalvVNi 253 (331)
T 1odm_A 176 KPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVETAAG-YQDIEADDTGYLINC 253 (331)
T ss_dssp CTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEETTE-EEECCCCTTSEEEEE
T ss_pred cCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEcCCC-eEECCCCCCeEEEEc
Confidence 56778999 99999 8 877776 8999999999999999995 79999999 788 999999999999999
Q ss_pred hhhhhhhhCCeecCcCcccccCCCCCeeEEEEeeecCCCeEEecCCcccCCCCCCCCCCccHHHHHHHHHhhhc
Q 044891 131 GDIMEIITNGKYRSIEHRATVNSVQERLSVGTFYYTRYDGEVYPASSLISEKAPALFRRLTVEEYLSGRFAREL 204 (233)
Q Consensus 131 Gd~l~~~TnG~~ks~~HRVv~~~~~~R~S~~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~ 204 (233)
||+||+||||+|||+.|||+.+ +++|+|++||++|+.|++|+|+++++++++ ++|++++++||+..+++..+
T Consensus 254 GD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 254 GSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp CHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHH
T ss_pred cHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHH
Confidence 9999999999999999999864 789999999999999999999999998877 89999999999999888764
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.7e-50 Score=360.99 Aligned_cols=194 Identities=20% Similarity=0.260 Sum_probs=154.6
Q ss_pred CCccccccCccC------CCcCCCCceeeeeccccCCCCCCCCCCCCCCchhHHHHHHHHHHHH-----------hh---
Q 044891 3 EDLEGFGQAYVL------SEEQKFVWGDGFIMTTLPVNLRKPHLFPKLPLPLRFSLCLFLEEMK-----------NF--- 62 (233)
Q Consensus 3 ~~~~GY~~~~~~------~~~~~~dw~E~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~~~~~-----------~~--- 62 (233)
+..+||+..... ...+..||+|+|++... +|.|| +++||+++++|+..+. ..
T Consensus 72 ~~~~Gy~~~~~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl 143 (311)
T 1dcs_A 72 TMRRGFTGLESESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGT 143 (311)
T ss_dssp CSSSEEEEC-----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCceeeccccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 356899865432 33568999999999864 58999 8999999999993221 11
Q ss_pred --------ccCCcceEEEeecCCCCCCc--C--ccccccccCCCCcEEEEecCCCCc---eEEeECCeEEEeecCCCeEE
Q 044891 63 --------FENGLQVMRMNYYPPCPQPE--K--VAGLTPHSDGCGLTILLQINEVEG---LQIKKDGMWIPLTPLPNAFL 127 (233)
Q Consensus 63 --------~~~~~~~lr~~~Ypp~~~~~--~--~~g~~~HtD~~~lTlL~qd~~v~G---LqV~~~g~W~~v~p~~~~lv 127 (233)
|.+..+.||++|||||++++ . .+|+++|||+|+||||+||++++| |||+.+|+|++|+|++|++|
T Consensus 144 ~~~~~~~~f~~~~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lv 223 (311)
T 1dcs_A 144 EPDGGVEAFLDCEPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVL 223 (311)
T ss_dssp CCTTCHHHHHSCCCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEE
T ss_pred CCcCcHhHHhhcchhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEE
Confidence 22225789999999998763 3 678999999999999999537999 99999999999999999999
Q ss_pred EcchhhhhhhhCCeecCcCcccccCC-----CCCeeEEEEeeecCCCeEEecCCcccCCCCCCCC--CCccHHHHHHHHH
Q 044891 128 VNVGDIMEIITNGKYRSIEHRATVNS-----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALF--RRLTVEEYLSGRF 200 (233)
Q Consensus 128 vnvGd~l~~~TnG~~ks~~HRVv~~~-----~~~R~S~~~F~~P~~d~~i~pl~~~v~~~~p~~y--~~~~~~ey~~~~~ 200 (233)
|||||+||+||||+|||+.|||+.++ .++|+|++||++|+.|++|+ +++++++++|++| +++|++||+..++
T Consensus 224 VNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~ 302 (311)
T 1dcs_A 224 VFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNY 302 (311)
T ss_dssp EEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSC
T ss_pred EEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHH
Confidence 99999999999999999999999987 68999999999999999999 9999998899999 9999999998877
Q ss_pred hhhcC
Q 044891 201 ARELR 205 (233)
Q Consensus 201 ~~~~~ 205 (233)
++.+.
T Consensus 303 ~~~~~ 307 (311)
T 1dcs_A 303 VNIRR 307 (311)
T ss_dssp CCEEC
T ss_pred HHHhc
Confidence 66543
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=5.4e-46 Score=328.71 Aligned_cols=176 Identities=23% Similarity=0.374 Sum_probs=145.9
Q ss_pred CCccccccCc---cCCCcCCCCceeeeeccccCCCCCCCCCCCCCCchhHHHHHHHHHH---------------------
Q 044891 3 EDLEGFGQAY---VLSEEQKFVWGDGFIMTTLPVNLRKPHLFPKLPLPLRFSLCLFLEE--------------------- 58 (233)
Q Consensus 3 ~~~~GY~~~~---~~~~~~~~dw~E~~~~~~~p~~~~~~n~WP~~~~~fr~~~~~y~~~--------------------- 58 (233)
+..+||+... ........||+|+|.+. .||+.|++||+++++|++.
T Consensus 64 ~~~~GY~~~~~~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~ 133 (280)
T 3on7_A 64 ETHDGFFPASISETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIK 133 (280)
T ss_dssp TTCCEEECCC--------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCCCccccCccccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 3568897643 12233468999999864 3888889999999999921
Q ss_pred ------HHhhccCCc-ceEEEeecCCCCCCc--CccccccccCCCCcEEEEecCCCCceEEe-ECCeEEEeecCCCeEEE
Q 044891 59 ------MKNFFENGL-QVMRMNYYPPCPQPE--KVAGLTPHSDGCGLTILLQINEVEGLQIK-KDGMWIPLTPLPNAFLV 128 (233)
Q Consensus 59 ------~~~~~~~~~-~~lr~~~Ypp~~~~~--~~~g~~~HtD~~~lTlL~qd~~v~GLqV~-~~g~W~~v~p~~~~lvv 128 (233)
|.++++.+. +.||++|||||+.++ ..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|++|++||
T Consensus 134 ~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vV 212 (280)
T 3on7_A 134 AKFSIPLPEMIANSHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIII 212 (280)
T ss_dssp TTCSSCHHHHHTTCSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEE
T ss_pred hhhhHHHHHHhcCCccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEE
Confidence 112233333 789999999998654 47899999999999999995 79999999 79999999999999999
Q ss_pred cchhhhhhhhCCeecCcCcccccCC----CCCeeEEEEeeecCCCeEEecCCcccCCCCCCCCCCccHHHHHHHHHhhh
Q 044891 129 NVGDIMEIITNGKYRSIEHRATVNS----VQERLSVGTFYYTRYDGEVYPASSLISEKAPALFRRLTVEEYLSGRFARE 203 (233)
Q Consensus 129 nvGd~l~~~TnG~~ks~~HRVv~~~----~~~R~S~~~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~ 203 (233)
|+||+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|+| ++|++||+.++++..
T Consensus 213 NiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 213 NIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp EECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred EcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 9999999999999999999998874 468999999999999999874 599999999998764
No 7
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=92.18 E-value=0.82 Score=38.48 Aligned_cols=92 Identities=11% Similarity=0.048 Sum_probs=57.5
Q ss_pred hhccCCcceEEEeecCCCCCCcCccccccccCCC--------CcEEEEecCCCCceEEeE-C----------CeEEEeec
Q 044891 61 NFFENGLQVMRMNYYPPCPQPEKVAGLTPHSDGC--------GLTILLQINEVEGLQIKK-D----------GMWIPLTP 121 (233)
Q Consensus 61 ~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~--------~lTlL~qd~~v~GLqV~~-~----------g~W~~v~p 121 (233)
+.........-+|+|.+- .-++++|.|-. ..||=+. ...=+.+.+ . +..+.+..
T Consensus 119 ~~~g~~~n~~LvN~Y~~G-----~d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L 191 (238)
T 2iuw_A 119 ENTGHTFNSLLCNLYRNE-----KDSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPL 191 (238)
T ss_dssp HHHSCCCCEEEEEEECST-----TCCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEE
T ss_pred HHhCCCCCEEEEEEECCC-----CCceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEc
Confidence 333444556678999872 12588899852 2222222 122233432 1 46899999
Q ss_pred CCCeEEEcchhhhhhhhCCeecCcCcccccCCCCCeeEEEEeee
Q 044891 122 LPNAFLVNVGDIMEIITNGKYRSIEHRATVNSVQERLSVGTFYY 165 (233)
Q Consensus 122 ~~~~lvvnvGd~l~~~TnG~~ks~~HRVv~~~~~~R~S~~~F~~ 165 (233)
.+|+++|.-|++=..|.-|.-+.. .....|+|+.|-..
T Consensus 192 ~~gsllvM~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 192 DHGTLLIMEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp CTTCEEEEEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred CCCCEEEEChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 999999999998777765543321 12568999998753
No 8
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=91.11 E-value=1.1 Score=40.10 Aligned_cols=120 Identities=19% Similarity=0.174 Sum_probs=68.4
Q ss_pred CCCCC-CchhHHHHHHHHHHHHhhccCCcceEEEeecCCCCCCcCccccccccCCC-C----cEEEEecCCCCceEEe-E
Q 044891 40 LFPKL-PLPLRFSLCLFLEEMKNFFENGLQVMRMNYYPPCPQPEKVAGLTPHSDGC-G----LTILLQINEVEGLQIK-K 112 (233)
Q Consensus 40 ~WP~~-~~~fr~~~~~y~~~~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~-~----lTlL~qd~~v~GLqV~-~ 112 (233)
.||.. |+.+...+++..+ ..++.......-+|.|.+ .-++++|.|-. . |..|-- ....=+.+. +
T Consensus 171 p~p~~~P~~L~~l~~r~~~--~~~~~~~~n~~lvN~Y~~------G~~I~~H~D~~~~~~~~I~slSL-G~~~~f~f~~~ 241 (345)
T 3tht_A 171 PLSGGLPDICESFLEKWLR--KGYIKHKPDQMTINQYEP------GQGIPAHIDTHSAFEDEIVSLSL-GSEIVMDFKHP 241 (345)
T ss_dssp ----CCCHHHHHHHHHHHH--HTSCSSCCSEEEEEEECT------TCCEEEECCCTTTBCSCEEEEEE-SSCEEEEEECT
T ss_pred CCCcCcCHHHHHHHHHHHh--cccCCCCCCEEEEEEecC------CCCEeeccCCchhcCCeEEEEEC-CCceeEEEccC
Confidence 34442 3334444444332 123344556677899977 12789999984 1 222211 112224444 3
Q ss_pred CCeEEEeecCCCeEEEcchhhhhhhhCCeecCcCcccc------------------cCCCCCeeEEEEeeecCC
Q 044891 113 DGMWIPLTPLPNAFLVNVGDIMEIITNGKYRSIEHRAT------------------VNSVQERLSVGTFYYTRY 168 (233)
Q Consensus 113 ~g~W~~v~p~~~~lvvnvGd~l~~~TnG~~ks~~HRVv------------------~~~~~~R~S~~~F~~P~~ 168 (233)
+|.++.+...+|+++|.-|+.-..|.-|.-+-...-+- ......|+|+.|=.-+..
T Consensus 242 ~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 242 DGIAVPVMLPRRSLLVMTGESRYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp TSCEEEEEECTTEEEEECTHHHHTSEEEECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred CCceEEEEcCCCcEEEEChHHhhceEccCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 57899999999999999999988886664433222210 011356999999876554
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=91.00 E-value=1.3 Score=37.47 Aligned_cols=81 Identities=21% Similarity=0.347 Sum_probs=55.9
Q ss_pred eEEEeecCCCCCCcCccccccccCCC-----CcEEEEecCC------CCc-eEEeECC--eEEEeecCCCeEEEcchhhh
Q 044891 69 VMRMNYYPPCPQPEKVAGLTPHSDGC-----GLTILLQINE------VEG-LQIKKDG--MWIPLTPLPNAFLVNVGDIM 134 (233)
Q Consensus 69 ~lr~~~Ypp~~~~~~~~g~~~HtD~~-----~lTlL~qd~~------v~G-LqV~~~g--~W~~v~p~~~~lvvnvGd~l 134 (233)
-+.+..|++. .-....|.|.. .+|+++.-++ .+| |++..++ ....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3668889861 12366788873 5788876332 144 6777543 6789999999999976431
Q ss_pred hhhhCCeecCcCcccccCCCCCeeEEEEeee
Q 044891 135 EIITNGKYRSIEHRATVNSVQERLSVGTFYY 165 (233)
Q Consensus 135 ~~~TnG~~ks~~HRVv~~~~~~R~S~~~F~~ 165 (233)
-..|.|.. ..+.|+||+..+.
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~ 212 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYF 212 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEc
Confidence 15899875 4579999988664
No 10
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=90.51 E-value=1.6 Score=35.85 Aligned_cols=90 Identities=10% Similarity=0.105 Sum_probs=55.4
Q ss_pred HHhhccCCcceEEEeecCCCCCCcCccccccccCCC-------Cc-EEEEecCCCCceEEeEC----------CeEEEee
Q 044891 59 MKNFFENGLQVMRMNYYPPCPQPEKVAGLTPHSDGC-------GL-TILLQINEVEGLQIKKD----------GMWIPLT 120 (233)
Q Consensus 59 ~~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~~-------~l-TlL~qd~~v~GLqV~~~----------g~W~~v~ 120 (233)
+.+.+.......-+|+|.+-. -+++.|.|-. .| +|=+. ...=+.+.+. +..+.+.
T Consensus 91 ~~~~~g~~~n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~ 163 (204)
T 3s57_A 91 VSGVTGQTFNFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLP 163 (204)
T ss_dssp HHHHHCCCCSEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEE
T ss_pred HHHHhCCCCceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEE
Confidence 333444455566689998721 2588899862 11 22222 1222444421 2578899
Q ss_pred cCCCeEEEcchhhhhhhhCCeecCcCcccccC--CCCCeeEEEEe
Q 044891 121 PLPNAFLVNVGDIMEIITNGKYRSIEHRATVN--SVQERLSVGTF 163 (233)
Q Consensus 121 p~~~~lvvnvGd~l~~~TnG~~ks~~HRVv~~--~~~~R~S~~~F 163 (233)
..+|+++|.-|++=..|. |.|... ....|+|+.|-
T Consensus 164 L~~GsllvM~g~~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 164 LAHGSLLMMNHPTNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp ECTTEEEEEETTHHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred CCCCCEEEECchhhheeE--------eeccccCCCCCCEEEEEee
Confidence 999999999998877776 444322 23689999884
No 11
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=90.51 E-value=2.8 Score=34.72 Aligned_cols=109 Identities=14% Similarity=0.076 Sum_probs=66.2
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHhhcc-CCcceEEEeecCCCCCCcCccccccccCC-----C--CcEEEEecCCCCce
Q 044891 37 KPHLFPKLPLPLRFSLCLFLEEMKNFFE-NGLQVMRMNYYPPCPQPEKVAGLTPHSDG-----C--GLTILLQINEVEGL 108 (233)
Q Consensus 37 ~~n~WP~~~~~fr~~~~~y~~~~~~~~~-~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~-----~--~lTlL~qd~~v~GL 108 (233)
....||..|+.+++.+++-.... . +. -.....-+|+|.+- . +++.|.|- + .+++=+. ...=+
T Consensus 75 ~~~pw~~~P~~L~~l~~~~~~~~-g-~~~~~pn~~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG--~~~~f 144 (211)
T 3i3q_A 75 TNKPWPAMPQSFHNLCQRAATAA-G-YPDFQPDACLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLG--LPAIF 144 (211)
T ss_dssp TSSBCCCCCHHHHHHHHHHHHHT-T-CTTCCCCEEEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEE--SCEEE
T ss_pred CCCCCCchHHHHHHHHHHHHHhc-C-CCCcCCCEEEEEEEcCC-----C-CcccccCCCccccCCCEEEEECC--CCeEE
Confidence 34679998887777766543221 1 11 12245668999871 2 78999993 2 1233232 12234
Q ss_pred EEeE---CCeEEEeecCCCeEEEcchhhhhhhhCCeecCcCcccccCC-------CCCeeEEEEee
Q 044891 109 QIKK---DGMWIPLTPLPNAFLVNVGDIMEIITNGKYRSIEHRATVNS-------VQERLSVGTFY 164 (233)
Q Consensus 109 qV~~---~g~W~~v~p~~~~lvvnvGd~l~~~TnG~~ks~~HRVv~~~-------~~~R~S~~~F~ 164 (233)
.+.+ .+..+.+...+|+++|.-|+.- .| .|.|.... ...|+|+.|-.
T Consensus 145 ~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 145 QFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp EECCSSTTSCCEEEEECTTCEEEECGGGT-TC--------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred EEecccCCCceEEEECCCCCEEEECchHH-ce--------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 4432 3678999999999999988762 22 36664432 24699999864
No 12
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=89.82 E-value=0.82 Score=38.83 Aligned_cols=80 Identities=19% Similarity=0.112 Sum_probs=54.1
Q ss_pred ceEEEeecCCCCCCcCccccccccCCC-----------CcEEEEecCC----CCc-eEEeECCeEEEeecCCCeEEEcch
Q 044891 68 QVMRMNYYPPCPQPEKVAGLTPHSDGC-----------GLTILLQINE----VEG-LQIKKDGMWIPLTPLPNAFLVNVG 131 (233)
Q Consensus 68 ~~lr~~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~qd~~----v~G-LqV~~~g~W~~v~p~~~~lvvnvG 131 (233)
.-+++++|.+- --..+|.|.. .+|+++.=++ .|| |.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G------~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGG------ETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTT------CEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCC------CeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 34888999772 2256777763 4666655332 344 555544344789999999998632
Q ss_pred hhhhhhhCCeecCcCcccccCCCCCeeEEEEeee
Q 044891 132 DIMEIITNGKYRSIEHRATVNSVQERLSVGTFYY 165 (233)
Q Consensus 132 d~l~~~TnG~~ks~~HRVv~~~~~~R~S~~~F~~ 165 (233)
.++|+|.......|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689997666679999998875
No 13
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=85.26 E-value=2.1 Score=35.32 Aligned_cols=43 Identities=19% Similarity=0.194 Sum_probs=33.1
Q ss_pred CeEEEeecCCCeEEEcchhhhhhhhCCeecCcCcccccCC-CCCeeEEEEeeecCC
Q 044891 114 GMWIPLTPLPNAFLVNVGDIMEIITNGKYRSIEHRATVNS-VQERLSVGTFYYTRY 168 (233)
Q Consensus 114 g~W~~v~p~~~~lvvnvGd~l~~~TnG~~ks~~HRVv~~~-~~~R~S~~~F~~P~~ 168 (233)
..+..+.|.+|.+||.-+. -.|.|..+. +++|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCC
Confidence 4567899999999997653 379998765 468999999998765
No 14
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=69.09 E-value=22 Score=29.23 Aligned_cols=88 Identities=10% Similarity=0.005 Sum_probs=54.2
Q ss_pred cceEEEeecCCCCCCcCccccccccCCC-----------CcEEEEecCC--CCceEEeECCeEEEeecCCCeEEEcchhh
Q 044891 67 LQVMRMNYYPPCPQPEKVAGLTPHSDGC-----------GLTILLQINE--VEGLQIKKDGMWIPLTPLPNAFLVNVGDI 133 (233)
Q Consensus 67 ~~~lr~~~Ypp~~~~~~~~g~~~HtD~~-----------~lTlL~qd~~--v~GLqV~~~g~W~~v~p~~~~lvvnvGd~ 133 (233)
...+++.+|.+-. ...+|.|.. .+|+|+.-++ .||=-+..+. =+.|.|..|++++.-.
T Consensus 110 ~E~lqv~~Y~~G~------~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~-- 180 (216)
T 3itq_A 110 GEGLHILNYEVDQ------QYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEY-- 180 (216)
T ss_dssp BCCCEEEEECBTC------CEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEEC--
T ss_pred ccceeEEEeCCCC------ccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEec--
Confidence 3458889997621 256777764 3677766332 3443334221 2788999998887542
Q ss_pred hhhhhCCe-ecCcCcccccCCCCCeeEEEEeee
Q 044891 134 MEIITNGK-YRSIEHRATVNSVQERLSVGTFYY 165 (233)
Q Consensus 134 l~~~TnG~-~ks~~HRVv~~~~~~R~S~~~F~~ 165 (233)
...||. -..++|++.......|+++..+++
T Consensus 181 --~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 181 --FYQDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp --CCSSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred --cCCCCCCCCccccccceeccccEEEEEeeEe
Confidence 111222 246899987655578999888775
No 15
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=67.30 E-value=6.1 Score=32.30 Aligned_cols=90 Identities=14% Similarity=0.186 Sum_probs=55.6
Q ss_pred ceEEEeecCCCCCCcCccccccccCC--------------CCcEEEEecC--CCCceEEeECC--------------eEE
Q 044891 68 QVMRMNYYPPCPQPEKVAGLTPHSDG--------------CGLTILLQIN--EVEGLQIKKDG--------------MWI 117 (233)
Q Consensus 68 ~~lr~~~Ypp~~~~~~~~g~~~HtD~--------------~~lTlL~qd~--~v~GLqV~~~g--------------~W~ 117 (233)
..+++.+|.+- -...+|.|. ..+|+|+.=+ ..+|=-+..+. .-+
T Consensus 98 e~~qv~rY~~G------~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~ 171 (224)
T 2jig_A 98 EGLQVLHYHDG------QKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGL 171 (224)
T ss_dssp CCCEEEEEETT------CCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSE
T ss_pred cceEEEecCCC------ccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCcccccccccccccccCce
Confidence 35788889762 125667774 1477775532 23453333211 247
Q ss_pred EeecCCCeEEEcchhhhhhhhCCee-cCcCcccccCCCCCeeEEEEeeecC
Q 044891 118 PLTPLPNAFLVNVGDIMEIITNGKY-RSIEHRATVNSVQERLSVGTFYYTR 167 (233)
Q Consensus 118 ~v~p~~~~lvvnvGd~l~~~TnG~~-ks~~HRVv~~~~~~R~S~~~F~~P~ 167 (233)
.|.|..|.+|+.-- ...||.. ..++|+|.......|+++..+++-.
T Consensus 172 ~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 172 AVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp EECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred EEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 89999998887542 1223432 5789998765557899998887643
No 16
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=47.49 E-value=54 Score=28.30 Aligned_cols=65 Identities=15% Similarity=0.156 Sum_probs=39.7
Q ss_pred ccccccCC--------CCcEEEEecCCCCceEEeECCeEEEeecCCCeEEEcchhhhhhhhCCeecCcCcccccCCCCCe
Q 044891 86 GLTPHSDG--------CGLTILLQINEVEGLQIKKDGMWIPLTPLPNAFLVNVGDIMEIITNGKYRSIEHRATVNSVQER 157 (233)
Q Consensus 86 g~~~HtD~--------~~lTlL~qd~~v~GLqV~~~g~W~~v~p~~~~lvvnvGd~l~~~TnG~~ks~~HRVv~~~~~~R 157 (233)
.+.+|.|+ +.+.+...-...+|....-+|+-+..++ ..+..+|. +..|.|.+.++.+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~-GE~w~~d~-------------~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP-GEIWFLDA-------------ATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT-TEEEECCT-------------TSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC-CCEEEEcC-------------CCeeEEEcCCCCCe
Confidence 38899998 2233333322345666555665444444 33334432 45899999999999
Q ss_pred eEEEEee
Q 044891 158 LSVGTFY 164 (233)
Q Consensus 158 ~S~~~F~ 164 (233)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988655
No 17
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=27.19 E-value=2.4e+02 Score=27.05 Aligned_cols=93 Identities=20% Similarity=0.169 Sum_probs=56.1
Q ss_pred HHHHhhccCC-----cceEEEeecCCCCCCcCccccccccCC-C--CcEEEEecCC---------CCceEEeE-C-----
Q 044891 57 EEMKNFFENG-----LQVMRMNYYPPCPQPEKVAGLTPHSDG-C--GLTILLQINE---------VEGLQIKK-D----- 113 (233)
Q Consensus 57 ~~~~~~~~~~-----~~~lr~~~Ypp~~~~~~~~g~~~HtD~-~--~lTlL~qd~~---------v~GLqV~~-~----- 113 (233)
+++.++++.+ ..-+.++.|++- --+..|.|. + .||+++.-+. .|-|+++. +
T Consensus 108 ~~Ls~iTGi~~Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P 181 (633)
T 3kt7_A 108 DFFGYVTKAGKLSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVP 181 (633)
T ss_dssp HHHHHHHTCCCCCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEE
T ss_pred HHHHHHhCCcccCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCC
Confidence 5555555531 234667888762 237789995 2 4666664222 23388873 2
Q ss_pred --CeEEEeecCCCeEEEcchhhhhhhhC-CeecCcCcccccC-CCCCeeEEEEeee
Q 044891 114 --GMWIPLTPLPNAFLVNVGDIMEIITN-GKYRSIEHRATVN-SVQERLSVGTFYY 165 (233)
Q Consensus 114 --g~W~~v~p~~~~lvvnvGd~l~~~Tn-G~~ks~~HRVv~~-~~~~R~S~~~F~~ 165 (233)
.....|.|..|.+|+..- . + ...|.|... ..+.|+||+-.++
T Consensus 182 ~~d~~~~I~P~fNrLV~F~v-------sp~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 182 HSDPSAKLVPQFNQIAFFKV-------LPG---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp CSSCSEEECCCTTEEEEEEC-------CTT---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred CCCceEEEecCCCeEEEEEc-------CCC---CCcCCCCccCCCCCEEEEEEEec
Confidence 246789999999998642 1 1 246765221 2788999986654
No 18
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=22.19 E-value=19 Score=26.13 Aligned_cols=18 Identities=22% Similarity=0.392 Sum_probs=14.7
Q ss_pred hhhhhCCeecCcCccccc
Q 044891 134 MEIITNGKYRSIEHRATV 151 (233)
Q Consensus 134 l~~~TnG~~ks~~HRVv~ 151 (233)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 456799999999988753
No 19
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=20.82 E-value=61 Score=17.82 Aligned_cols=13 Identities=31% Similarity=0.685 Sum_probs=10.1
Q ss_pred eEEeECCeEEEee
Q 044891 108 LQIKKDGMWIPLT 120 (233)
Q Consensus 108 LqV~~~g~W~~v~ 120 (233)
..|+++|.|+...
T Consensus 12 ~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 12 AYVRKFGEWVLLS 24 (27)
T ss_dssp EEEEETTEEEEGG
T ss_pred eeEEEcCeEEEcc
Confidence 5677999999754
Done!