Query 044897
Match_columns 90
No_of_seqs 132 out of 1063
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 13:39:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044897.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044897hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d30_A YOAJ, expansin like pro 99.9 7.6E-27 2.6E-31 162.3 8.3 79 1-90 21-105 (208)
2 2hcz_X Beta-expansin 1A; domai 99.9 1.1E-26 3.9E-31 164.9 9.4 84 1-90 40-137 (245)
3 1n10_A PHL P I, pollen allerge 99.9 2.8E-26 9.7E-31 162.6 8.0 84 1-90 40-137 (241)
4 1wc2_A Endoglucanase; hydrolas 99.8 4.4E-22 1.5E-26 135.4 3.1 80 10-90 46-154 (181)
5 1bw3_A Barwin, basic barley SE 99.8 2.2E-20 7.5E-25 121.0 3.9 58 22-90 58-120 (125)
6 4avr_A PA4485; unknown functio 99.7 4.3E-17 1.5E-21 101.1 10.0 74 1-89 18-92 (95)
7 2kqa_A Cerato-platanin; elicit 99.0 1.5E-09 5E-14 70.3 6.9 69 8-90 47-118 (129)
8 3m3g_A EPL1 protein; fungal, p 99.0 1.8E-09 6.1E-14 69.3 6.7 65 11-90 44-112 (120)
9 3sul_A Cerato-platanin-like pr 98.9 3.6E-09 1.2E-13 68.0 7.0 65 13-90 46-114 (122)
10 3suk_A Cerato-platanin-like pr 98.9 2.9E-09 9.9E-14 68.7 6.4 72 8-90 42-117 (125)
11 3suj_A Cerato-platanin 1; doub 98.9 7.1E-09 2.4E-13 67.0 6.7 73 8-90 41-117 (127)
12 3sum_A Cerato-platanin-like pr 98.8 1.2E-08 4.1E-13 66.5 7.4 62 11-90 48-119 (136)
13 2eng_A Endoglucanase V; cellul 96.6 0.0018 6.1E-08 44.7 3.5 41 25-71 84-125 (210)
14 3nrl_A Uncharacterized protein 83.3 3.1 0.00011 24.4 4.9 37 8-55 13-50 (81)
15 2vqe_N 30S ribosomal protein S 40.7 9.7 0.00033 21.0 0.9 36 53-88 18-61 (61)
16 3ndh_A Restriction endonucleas 30.4 40 0.0014 22.5 2.8 27 64-90 180-207 (225)
17 4b2v_A S64; toxin, ICK; NMR {S 28.9 10 0.00034 17.9 -0.3 12 25-36 19-30 (32)
18 3bbn_N Ribosomal protein S14; 28.0 5.8 0.0002 24.0 -1.5 39 50-88 54-100 (100)
19 3r8n_N 30S ribosomal protein S 25.1 9.5 0.00033 23.1 -0.9 39 50-88 54-100 (100)
20 3lcz_A YCZA, inhibitor of trap 21.4 57 0.002 17.1 1.9 27 45-73 14-41 (53)
No 1
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=99.94 E-value=7.6e-27 Score=162.33 Aligned_cols=79 Identities=29% Similarity=0.368 Sum_probs=71.9
Q ss_pred CCCCCc-cCCCceEEEEChhccCCC----CcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCC-CceEcCHHHHH
Q 044897 1 SACFGN-NGQGVMIAAAGDALWDNG----AVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCP-STIDLSREAFT 74 (90)
Q Consensus 1 ~ACg~~-~~~~~~~aAls~~~~~~g----~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~-~~lDLs~~aF~ 74 (90)
.|||.. .+.+.++||||+.+|++| +.||+||+|++ .+++|+|+|+|+||+|+ .|||||+.||+
T Consensus 21 GACG~~~~~~~~~~aAls~~~f~~G~~~~~~CG~c~~v~~-----------~~gsv~V~v~D~CP~C~~~~~DLS~~aF~ 89 (208)
T 3d30_A 21 GAFLLDPIPSDMEITAINPADLNYGGVKAALAGSYLEVEG-----------PKGKTTVYVTDLYPEGARGALDLSPNAFR 89 (208)
T ss_dssp CTTCCCCCCTTCCEEEECHHHHTGGGCTTTTTTCEEEEEE-----------TTEEEEEEEEEECTTCCTTCEEECHHHHH
T ss_pred CcCCCCCCCCCCEEEEeCHHHhCCCCcCccccCCEEEEEe-----------CCCcEEEEEEECCCCCCCCeEECCHHHHH
Confidence 489655 356899999999999987 89999999999 45589999999999999 99999999999
Q ss_pred hhcCCCCcEEEEEEEC
Q 044897 75 QIANPVAGIINIDYHQ 90 (90)
Q Consensus 75 ~la~~~~G~v~i~w~~ 90 (90)
+|++++.|+++|+|++
T Consensus 90 ~la~~~~G~i~v~~~~ 105 (208)
T 3d30_A 90 KIGNMKDGKINIKWRV 105 (208)
T ss_dssp HHSCGGGSSEEEEEEE
T ss_pred HhcccCCCEEEEEEEE
Confidence 9999999999999985
No 2
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=99.94 E-value=1.1e-26 Score=164.93 Aligned_cols=84 Identities=30% Similarity=0.567 Sum_probs=75.0
Q ss_pred CCC-CCcc---CCCceEEEEChhccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCC--C-CceEcCHHHH
Q 044897 1 SAC-FGNN---GQGVMIAAAGDALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGC--P-STIDLSREAF 73 (90)
Q Consensus 1 ~AC-g~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C--~-~~lDLs~~aF 73 (90)
.|| |+++ +.+.++||||+.+|++|..||+||||+|.+ ++.|.+++|+|+|+|+|+ | + .|||||+.||
T Consensus 40 GACGyg~~~~~p~~~~~aAls~~lf~~G~~CG~Cy~V~c~~-----~~~C~~~sv~V~VtD~C~-C~~~~~hfDLS~~AF 113 (245)
T 2hcz_X 40 GACGIKNVNLPPYSGMTACGNVPIFKDGKGCGSCYEVRCKE-----KPECSGNPVTVYITDMNY-EPIAPYHFDLSGKAF 113 (245)
T ss_dssp CTTCCCCTTSTTTTTCEEEECHHHHGGGTSTTCEEEEECCS-----SSSBCSSCEEEEEEEECC-CTTSSSEEEECHHHH
T ss_pred ccCCCCCCCcCCCCCEEEEeCHHHcCCchhcCCeEEEEeCC-----CCccCCCCEEEEEEeccC-CCCCCccEEcCHHHH
Confidence 389 5553 458999999999999999999999999975 357999999999999997 6 4 8999999999
Q ss_pred HhhcC-------CCCcEEEEEEEC
Q 044897 74 TQIAN-------PVAGIINIDYHQ 90 (90)
Q Consensus 74 ~~la~-------~~~G~v~i~w~~ 90 (90)
.+||+ ++.|+|+|+|+|
T Consensus 114 ~~iA~~g~~~~L~~~Gii~V~yrr 137 (245)
T 2hcz_X 114 GSLAKPGLNDKIRHCGIMDVEFRR 137 (245)
T ss_dssp HHTBCTTCHHHHTTTCCEEEEEEE
T ss_pred HHHhccccccccccCCEEEEEEEE
Confidence 99998 799999999996
No 3
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=99.93 E-value=2.8e-26 Score=162.59 Aligned_cols=84 Identities=32% Similarity=0.652 Sum_probs=74.6
Q ss_pred CCC-CCcc---CCCceEEEEChhccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCC---CceEcCHHHH
Q 044897 1 SAC-FGNN---GQGVMIAAAGDALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCP---STIDLSREAF 73 (90)
Q Consensus 1 ~AC-g~~~---~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~---~~lDLs~~aF 73 (90)
.|| |+++ +.+.++||||+.+|++|..||+||||+|.+ ++.|.+++|+|+|+|+| .|+ .|||||+.||
T Consensus 40 GACGyg~~~~~~~g~~~aAls~~lf~~G~~CG~CyeV~c~~-----~~~C~~~~v~V~VtD~C-~C~~~~~hfDLS~~AF 113 (241)
T 1n10_A 40 GACGYKDVDKPPFSGMTGCGNTPIFKSGRGCGSCFEIKCTK-----PEACSGEPVVVHITDDN-EEPIAPYHFDLSGHAF 113 (241)
T ss_dssp CTTCCCCTTSTTTTTCEEEECHHHHGGGTTSSCEEEEEECS-----STTBCSCCEEEEEEEEC-SSCSSSSEEEEEHHHH
T ss_pred eeCCCCCcCcCCCCcEEEEeCHHHccCcccCCCeEEEEeCC-----CCccCCCCEEEEEeEec-CCCCCCcceecCHHHH
Confidence 489 5653 458899999999999999999999999975 34798999999999999 573 8999999999
Q ss_pred HhhcC-------CCCcEEEEEEEC
Q 044897 74 TQIAN-------PVAGIINIDYHQ 90 (90)
Q Consensus 74 ~~la~-------~~~G~v~i~w~~ 90 (90)
.+||+ ++.|+|+|+|||
T Consensus 114 ~~iA~~g~~~~L~~~Gii~V~yrr 137 (241)
T 1n10_A 114 GAMAKKGDEQKLRSAGELELQFRR 137 (241)
T ss_dssp HTTBSTTCHHHHHTTCSEEEEEEE
T ss_pred HHhhccCcccccccCCEEEEEEEE
Confidence 99998 689999999996
No 4
>1wc2_A Endoglucanase; hydrolase, cellulase, cellulose, double-PSI fold, glycoside hydrolase; 1.2A {Mytilus edulis} SCOP: b.52.1.1
Probab=99.84 E-value=4.4e-22 Score=135.37 Aligned_cols=80 Identities=26% Similarity=0.451 Sum_probs=66.2
Q ss_pred CceEEEEChhccCCC------CcCCCeEEEEEcCCCCC-CCCCC-CCCeEEEEEecCCCC-------CC-----------
Q 044897 10 GVMIAAAGDALWDNG------AVCGKMFNVKCTGARNA-VPHPC-TGESVTVKIVDHCPG-------CP----------- 63 (90)
Q Consensus 10 ~~~~aAls~~~~~~g------~~CG~c~~v~~~~~~~~-~~~~c-~g~sv~v~VvD~Cp~-------C~----------- 63 (90)
+.++||||+.||++| ..||+||||++.+.... .+.+| .|++|+|+|+|+||+ |+
T Consensus 46 g~~tAALStaLFn~G~~~w~G~~CG~Cyel~c~~~~c~~cg~~~~~g~SI~VtaTN~CPpn~~nggWCn~pp~~~~~n~~ 125 (181)
T 1wc2_A 46 GSFVAAASQMYFDSGNKGWCGQHCGQCIKLTTTGGYVPGQGGPVREGLSKTFMITNLCPNIYPNQDWCNQGSQYGGHNKY 125 (181)
T ss_dssp GSCEEEEEHHHHCTTCCSSSCTTTTCEEEEEEEEEECTTSCCCCCTTCEEEEEEEEEECSSTTSTTTSCCSSSSSCCCTT
T ss_pred cceeeecCHHHhCCCccccccccCCCcEEEEcCCCCcccccccCCCCCeEEEEEecCCCCCCCCCCccCCCcccCccccc
Confidence 789999999999997 89999999999653100 01123 378999999999993 83
Q ss_pred ---CceEcCHHHHHhhcCCCCcEEEEEEEC
Q 044897 64 ---STIDLSREAFTQIANPVAGIINIDYHQ 90 (90)
Q Consensus 64 ---~~lDLs~~aF~~la~~~~G~v~i~w~~ 90 (90)
.||||+..| .+|+....|+++|+|||
T Consensus 126 G~~~HFDLs~pa-~~Ia~~~~GivpV~yrr 154 (181)
T 1wc2_A 126 GYELHLDLENGR-SQVTGMGWNNPETTWEV 154 (181)
T ss_dssp SCSEEEEEECTT-STTGGGTCSSEEEEEEE
T ss_pred CccccccccchH-HHhhhhcCCCceeEEEE
Confidence 499999999 89998899999999996
No 5
>1bw3_A Barwin, basic barley SEED protein; lectin; NMR {Hordeum vulgare} SCOP: b.52.1.2 PDB: 1bw4_A
Probab=99.80 E-value=2.2e-20 Score=120.96 Aligned_cols=58 Identities=34% Similarity=0.638 Sum_probs=52.4
Q ss_pred CCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcC-HHHHHhhcC----CCCcEEEEEEEC
Q 044897 22 DNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLS-REAFTQIAN----PVAGIINIDYHQ 90 (90)
Q Consensus 22 ~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs-~~aF~~la~----~~~G~v~i~w~~ 90 (90)
++++.||+|++|++.. +|++|+|+|+|+||+|. |||| +.||++|++ .+.|+++|+|++
T Consensus 58 ~~g~~CG~cv~Vtn~~---------nGksV~V~VvD~CP~gg--LDLS~~~AF~~Ia~~g~G~~~G~i~V~w~~ 120 (125)
T 1bw3_A 58 RGQAACGKCLRVTNPA---------TGAQITARIVDQCANGG--LDLDWDTVFTKIDTNGIGYQQGHLNVNYQF 120 (125)
T ss_dssp CSGGGTTCEEEEEETT---------TTEEEEEEEEECCSSSS--CCSCSSSSHHHHCSSCHHHHHSEEEEEEEE
T ss_pred CCCcccCCEEEeEeCC---------CCCEEEEEEEEeCCCCC--CCCCCHHHHHHHhccCCcccCcEEEEEEEE
Confidence 6778999999999954 69999999999999864 9999 999999997 679999999984
No 6
>4avr_A PA4485; unknown function, GRAM-negative bacteria, infectious disease structure-based inhibitor design; 1.08A {Pseudomonas aeruginosa PA01}
Probab=99.73 E-value=4.3e-17 Score=101.13 Aligned_cols=74 Identities=24% Similarity=0.213 Sum_probs=67.9
Q ss_pred CCCCCccCCCceEEEEChhccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCC-CceEcCHHHHHhhcCC
Q 044897 1 SACFGNNGQGVMIAAAGDALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCP-STIDLSREAFTQIANP 79 (90)
Q Consensus 1 ~ACg~~~~~~~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~-~~lDLs~~aF~~la~~ 79 (90)
||||..+....|+||-.+ ..||..++|+++. +|++|+|+|+|+||.++ +.||||+.||++|+..
T Consensus 18 TA~Ge~~~~~~~tAAH~t------lP~gt~vrVtNl~---------nGksVvVrVnDRGP~~~griIDLS~aAa~~Lg~~ 82 (95)
T 4avr_A 18 TASGERYNPNAMTAAHRT------LPFGARVRVTNLD---------NRRSVVVRINDRGPFRRGRIIDVSRKAAEGLGMI 82 (95)
T ss_dssp CTTSCBCCTTSCEEECSS------SCTTCEEEEEETT---------TCCEEEEEEEECCCCSTTEEEEECHHHHHHHTCT
T ss_pred CCCccCcCCCCCEEEcCC------CCCCcEEEEEECC---------CCcEEEEEEccCCCCCCCCEEEeCHHHHHHhCCc
Confidence 688888888899999873 4799999999976 89999999999999999 8999999999999999
Q ss_pred CCcEEEEEEE
Q 044897 80 VAGIINIDYH 89 (90)
Q Consensus 80 ~~G~v~i~w~ 89 (90)
+.|+++|+|+
T Consensus 83 ~~G~~~V~ve 92 (95)
T 4avr_A 83 RSGVAPVRIE 92 (95)
T ss_dssp TTSCEEEEEE
T ss_pred CCCEEEEEEE
Confidence 9999999997
No 7
>2kqa_A Cerato-platanin; elicitor, secreted, toxin; NMR {Ceratocystis platani}
Probab=98.98 E-value=1.5e-09 Score=70.31 Aligned_cols=69 Identities=26% Similarity=0.480 Sum_probs=57.7
Q ss_pred CCCceEEEEChhc-cCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcCHHHHHhhcC-CCCcEE-
Q 044897 8 GQGVMIAAAGDAL-WDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLSREAFTQIAN-PVAGII- 84 (90)
Q Consensus 8 ~~~~~~aAls~~~-~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs~~aF~~la~-~~~G~v- 84 (90)
|.=-+|.+....- |+ .+.||.|++|++. +|++|.+..+|.-+ ..|+++++||+.|++ ...|+|
T Consensus 47 p~FP~IGga~~iagWN-S~~CGtC~~lty~----------ng~sI~vlaID~A~---~gFnIs~~Amn~LT~G~~lG~V~ 112 (129)
T 2kqa_A 47 PGFPNVGGIPDIAGWD-SPSCGTCWKVTIP----------NGNSIFIRGVDSGR---GGFNVNPTAFTKLVGSTEAGRVD 112 (129)
T ss_dssp SCSSSEEEETTCCSTT-CTTCSCEEEEEET----------TTEEEEEEEEEECS---SSEEECHHHHHHHHSSSSSCCBC
T ss_pred CCCCeeccchhhccCC-CCCCCceEEEEEc----------CCCEEEEEEEccCC---CceeehHHHHHHhcCCcccCcEe
Confidence 3335566666554 76 6999999999994 59999999999988 899999999999975 788999
Q ss_pred EEEEEC
Q 044897 85 NIDYHQ 90 (90)
Q Consensus 85 ~i~w~~ 90 (90)
+++|+|
T Consensus 113 ~a~~~q 118 (129)
T 2kqa_A 113 NVNYVQ 118 (129)
T ss_dssp SCEEEE
T ss_pred EEEEEE
Confidence 899875
No 8
>3m3g_A EPL1 protein; fungal, plant defense, fungus, polysaccharide-binding protei; 1.39A {Hypocrea virens}
Probab=98.96 E-value=1.8e-09 Score=69.26 Aligned_cols=65 Identities=25% Similarity=0.488 Sum_probs=54.4
Q ss_pred ceEEEECh-hccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcCHHHHHhhcC-C--CCcEEEE
Q 044897 11 VMIAAAGD-ALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLSREAFTQIAN-P--VAGIINI 86 (90)
Q Consensus 11 ~~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs~~aF~~la~-~--~~G~v~i 86 (90)
-+|.+... .-|++ +.||.|++|++ +|++|.+..+|.-+ ..|+|+.+||+.|++ . ..|+|++
T Consensus 44 P~IGg~~~i~gwns-~~CGtC~~lty-----------~g~si~vlaID~a~---~Gfnis~~A~n~LT~G~a~~lG~V~a 108 (120)
T 3m3g_A 44 PYIGGAAAVAGWNS-ASCGTCWKLQY-----------SGHTIYVLAVDHAA---SGFNIALDAMNALTGGQAVQLGRVSA 108 (120)
T ss_dssp TSEEEETTCCSTTC-TTTTCEEEEEE-----------TTEEEEEEEEEECS---SSEEECHHHHHHHHTSCHHHHCEEEC
T ss_pred CccccccccccCCC-CCCCceEEEEE-----------CCeEEEEEEEecCC---CceeecHHHHHHhhCCcceeeeeEeE
Confidence 45666654 34765 99999999999 79999999999987 889999999999985 3 3499999
Q ss_pred EEEC
Q 044897 87 DYHQ 90 (90)
Q Consensus 87 ~w~~ 90 (90)
+|+|
T Consensus 109 ~~~~ 112 (120)
T 3m3g_A 109 TATQ 112 (120)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9975
No 9
>3sul_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.63A {Moniliophthora perniciosa}
Probab=98.92 E-value=3.6e-09 Score=68.00 Aligned_cols=65 Identities=22% Similarity=0.485 Sum_probs=53.8
Q ss_pred EEEECh-hccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcCHHHHHhhcCC---CCcEEEEEE
Q 044897 13 IAAAGD-ALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLSREAFTQIANP---VAGIINIDY 88 (90)
Q Consensus 13 ~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs~~aF~~la~~---~~G~v~i~w 88 (90)
|.+... .-|++ +.||.|+||++.. .|++|.+..+|.-+ ..|+|+.+||+.|++. ..|+|+++|
T Consensus 46 IGg~~~V~gwnS-~~CGtC~~lty~~---------~g~si~vlaID~a~---~Gfnis~~Amn~LT~G~a~~lG~V~a~~ 112 (122)
T 3sul_A 46 VGAVDTITGWNS-ESCGTCYQITWSG---------TGKTIHVVGVDVAG---NGFNVGQRAMDDLTNGQAVALGNIDVTA 112 (122)
T ss_dssp EEEETTCCSTTC-TTTTCEEEEEETT---------TTEEEEEEEEEECS---SSEEECHHHHHHHHTSCHHHHSEEEEEE
T ss_pred cccccccccCCC-CCCCceEEEEEcC---------CCcEEEEEEEecCC---CceeehHHHHHHhcCCcceecceEeEEE
Confidence 666654 34766 9999999999932 38999999999987 8899999999999853 359999999
Q ss_pred EC
Q 044897 89 HQ 90 (90)
Q Consensus 89 ~~ 90 (90)
+|
T Consensus 113 ~q 114 (122)
T 3sul_A 113 TL 114 (122)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 10
>3suk_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.91 E-value=2.9e-09 Score=68.73 Aligned_cols=72 Identities=19% Similarity=0.372 Sum_probs=55.8
Q ss_pred CCCceEEEEChh-ccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcCHHHHHhhcCC---CCcE
Q 044897 8 GQGVMIAAAGDA-LWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLSREAFTQIANP---VAGI 83 (90)
Q Consensus 8 ~~~~~~aAls~~-~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs~~aF~~la~~---~~G~ 83 (90)
|.=-+|.+.... -||+ +.||.|+||++.++. ..++|.+..+|.-. ..|+|+.+||+.|++. ..|+
T Consensus 42 p~FP~IGg~~~i~gwnS-~~CGtC~~lty~g~~-------~~~si~vlaID~a~---~Gfnis~~Amn~LT~G~a~~lG~ 110 (125)
T 3suk_A 42 PTFPHIGASSDIGGFNS-PACGNCYTISFTFQG-------VTRSINLVAIDHAG---NGFNVAQAAMDELTNGNAVALGT 110 (125)
T ss_dssp TTTTSEEEETTCCSTTC-TTTTCEEEEEEEETT-------EEEEEEEEEEEECS---SSEEECHHHHHHHHTSCHHHHCE
T ss_pred CCCCeeccccccccCCC-CCCCeeEEEEEcCCC-------cceEEEEEEEecCC---CceeecHHHHHHhcCCcccccce
Confidence 333557776653 4765 999999999993210 23999999999987 8899999999999853 4599
Q ss_pred EEEEEEC
Q 044897 84 INIDYHQ 90 (90)
Q Consensus 84 v~i~w~~ 90 (90)
|+++|+|
T Consensus 111 V~~~~~~ 117 (125)
T 3suk_A 111 IDVQSQQ 117 (125)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 9999985
No 11
>3suj_A Cerato-platanin 1; double PSI beta barrel, unknown function; 1.34A {Moniliophthora perniciosa}
Probab=98.86 E-value=7.1e-09 Score=67.04 Aligned_cols=73 Identities=21% Similarity=0.375 Sum_probs=55.3
Q ss_pred CCCceEEEECh-hccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCceEcCHHHHHhhcCC---CCcE
Q 044897 8 GQGVMIAAAGD-ALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPSTIDLSREAFTQIANP---VAGI 83 (90)
Q Consensus 8 ~~~~~~aAls~-~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~lDLs~~aF~~la~~---~~G~ 83 (90)
|.=-+|.+... .-||+ +.||.|+||++.+.. -..++|.+..+|.-+ ..|+|+.+||+.|++. ..|+
T Consensus 41 p~FP~IGg~~~i~gwns-~~CGtC~~lty~g~~------~~~~si~vlaID~a~---~Gfnis~~Amn~LT~g~a~~lG~ 110 (127)
T 3suj_A 41 PGFPCIGGSSDIAGYNS-PNCGSCYQLTYSSAH------TTPKSIYMVAIDRSA---EGFTASKQAMDDLTNKRAEELGT 110 (127)
T ss_dssp TTTTSEEEETTCCSTTC-TTTTCEEEEEECCSS------SCCEEEEEEEEEECS---SSEEECHHHHHHHHTSCHHHHSS
T ss_pred CCCCeeccccccccCCC-CCCCceEEEEECCCC------CcceEEEEEEEecCC---CceeecHHHHHHhcCCcccccee
Confidence 33345666653 34765 999999999994310 023899999999987 8899999999999853 3589
Q ss_pred EEEEEEC
Q 044897 84 INIDYHQ 90 (90)
Q Consensus 84 v~i~w~~ 90 (90)
|+++|+|
T Consensus 111 V~~~~~~ 117 (127)
T 3suj_A 111 VNVDVRK 117 (127)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999985
No 12
>3sum_A Cerato-platanin-like protein; double PSI beta barrel, unknown function; 1.87A {Moniliophthora perniciosa}
Probab=98.84 E-value=1.2e-08 Score=66.49 Aligned_cols=62 Identities=16% Similarity=0.217 Sum_probs=52.5
Q ss_pred ceEEEEChhccCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCCCc--eEcCHHHHHhhcCC-------CC
Q 044897 11 VMIAAAGDALWDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCPST--IDLSREAFTQIANP-------VA 81 (90)
Q Consensus 11 ~~~aAls~~~~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~~~--lDLs~~aF~~la~~-------~~ 81 (90)
-+|.|.. |++ +.||.|++|++ +|++|.+..+|.-. .. ||||.+||+.|++. ..
T Consensus 48 P~igg~~---wns-~~CGtCwkLtY-----------~G~sI~vlaID~a~---~g~~FnIs~~Amn~LT~G~~a~~a~el 109 (136)
T 3sum_A 48 PHFVAAP---EAQ-TECGSCWKLRY-----------KGNHAFVTVVDRVE---EANLFVGGTDLVKNLTTFNGAPEGYDW 109 (136)
T ss_dssp TSEEECC---BTT-BCTTCEEEEEE-----------TTEEEEEEEEECCC---STTEEEECHHHHHHHTCBTTBCHHHHH
T ss_pred Ccccccc---cCC-CCCCceEEEEE-----------CCeEEEEEEEecCC---CcceEeehHHHHHHHhCCCccccceec
Confidence 3567666 765 99999999999 79999999999976 67 99999999999853 25
Q ss_pred cEEEE-EEEC
Q 044897 82 GIINI-DYHQ 90 (90)
Q Consensus 82 G~v~i-~w~~ 90 (90)
|+|++ +|+|
T Consensus 110 G~Vda~~~~q 119 (136)
T 3sum_A 110 GTAQLFSAYQ 119 (136)
T ss_dssp SEEECSEEEE
T ss_pred ceeeeeEEEE
Confidence 89999 8875
No 13
>2eng_A Endoglucanase V; cellulose degradation, hydrolase (endoglucanase), glycosidase; 1.50A {Humicola insolens} SCOP: b.52.1.1 PDB: 3eng_A* 4eng_A* 1hd5_A 1oa7_A* 1oa9_A 1l8f_A
Probab=96.57 E-value=0.0018 Score=44.73 Aligned_cols=41 Identities=17% Similarity=0.321 Sum_probs=30.5
Q ss_pred CcCCCeEEEEEcCCCCCCCCCCCCCeEEEEEecCCCCCC-CceEcCHH
Q 044897 25 AVCGKMFNVKCTGARNAVPHPCTGESVTVKIVDHCPGCP-STIDLSRE 71 (90)
Q Consensus 25 ~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~VvD~Cp~C~-~~lDLs~~ 71 (90)
..|++||+++-++. ..+||+.+|+|++....=. +||||...
T Consensus 84 ~~Cc~C~~LtFt~~------~~~GKkmiVQ~TNtG~Dl~~n~FDl~iP 125 (210)
T 2eng_A 84 GWCCACYELTFTSG------PVAGKKMVVQSTSTGGDLGSNHFDLNIP 125 (210)
T ss_dssp HHTTCEEEEEECSG------GGTTCEEEEEEEEC-----CCEEEEECT
T ss_pred cccceeEEEEEcCC------CcCCCEEEEEEecccCCCCCCceeEecC
Confidence 57999999999764 2369999999999987655 99999754
No 14
>3nrl_A Uncharacterized protein rumgna_01417; beta protein, structural genomics, PSI-2, protein structure initiative; 1.90A {Ruminococcus gnavus}
Probab=83.31 E-value=3.1 Score=24.45 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=24.6
Q ss_pred CCCceEEEEChhc-cCCCCcCCCeEEEEEcCCCCCCCCCCCCCeEEEEE
Q 044897 8 GQGVMIAAAGDAL-WDNGAVCGKMFNVKCTGARNAVPHPCTGESVTVKI 55 (90)
Q Consensus 8 ~~~~~~aAls~~~-~~~g~~CG~c~~v~~~~~~~~~~~~c~g~sv~v~V 55 (90)
...+-+..++... |..|-.||.|++|.. +++-+-++|
T Consensus 13 ~~~dRydi~~~~~~~ygGlHCGE~feV~v-----------~~~WiptRi 50 (81)
T 3nrl_A 13 TETGRYDIRFDLESFYGGLHCGECFDVKV-----------KDVWVPVRI 50 (81)
T ss_dssp TTTTEEEEEEETTEECCCCCTTCEEEEEE-----------TTEEEEEEE
T ss_pred CCCCeEEEEeccccccCCcccccEEEEEE-----------CCEEEEEEE
Confidence 4445444444443 456889999999998 566666655
No 15
>2vqe_N 30S ribosomal protein S14 type Z; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: g.39.1.7 PDB: 1gix_Q* 1hnw_N* 1hnx_N* 1hnz_N* 1hr0_N 1ibk_N* 1ibl_N* 1ibm_N 1jgo_Q* 1jgp_Q* 1jgq_Q* 1ml5_Q* 1xmo_N* 1xmq_N* 1xnq_N* 1xnr_N* 1yl4_Q 2b64_N* 2b9m_N* 2b9o_N* ...
Probab=40.69 E-value=9.7 Score=20.99 Aligned_cols=36 Identities=19% Similarity=0.479 Sum_probs=28.6
Q ss_pred EEEecCCCCCC------CceEcCHHHHHhhc--CCCCcEEEEEE
Q 044897 53 VKIVDHCPGCP------STIDLSREAFTQIA--NPVAGIINIDY 88 (90)
Q Consensus 53 v~VvD~Cp~C~------~~lDLs~~aF~~la--~~~~G~v~i~w 88 (90)
+++.+.|.-|. ..|.|+.-.|.++| ..=.|+..-+|
T Consensus 18 ~r~~nRC~~~GR~rg~iRkfglcR~~FRe~A~~g~lpGv~KasW 61 (61)
T 2vqe_N 18 VRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW 61 (61)
T ss_dssp GGCCCCCTTTCCCTTCCTTTSSCHHHHHHHHHHTCSSSCEECCC
T ss_pred CCCceeeecCCCCceeeccCceeHHHHHHHHhCCccCCeEeeeC
Confidence 56778898777 67899999999997 45578877666
No 16
>3ndh_A Restriction endonuclease THAI; endonuclease-DNA complex, restriction enzyme, THAI, intercal hydrolase-DNA complex; HET: DNA PGE; 1.30A {Thermoplasma acidophilum}
Probab=30.39 E-value=40 Score=22.46 Aligned_cols=27 Identities=22% Similarity=0.458 Sum_probs=23.5
Q ss_pred CceEcCHHHHHhh-cCCCCcEEEEEEEC
Q 044897 64 STIDLSREAFTQI-ANPVAGIINIDYHQ 90 (90)
Q Consensus 64 ~~lDLs~~aF~~l-a~~~~G~v~i~w~~ 90 (90)
+.+.+|..|...+ +..+.=+++|+|++
T Consensus 180 RGVEiSn~Al~e~i~~~~TmsI~IeWkk 207 (225)
T 3ndh_A 180 RGVEISNEALKEIMTDEETMSIKIEWKK 207 (225)
T ss_dssp CSEEECHHHHHHHHHSTTCEEEEEECCC
T ss_pred CceeccHHHHHHHhccccceEEEEEeee
Confidence 8999999998887 67777889999985
No 17
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=28.91 E-value=10 Score=17.94 Aligned_cols=12 Identities=25% Similarity=0.775 Sum_probs=8.8
Q ss_pred CcCCCeEEEEEc
Q 044897 25 AVCGKMFNVKCT 36 (90)
Q Consensus 25 ~~CG~c~~v~~~ 36 (90)
.-||+|++-.|.
T Consensus 19 wccgrcirnecr 30 (32)
T 4b2v_A 19 WCCGRCIRNECR 30 (32)
T ss_dssp CCSSEEETTEEE
T ss_pred hhhhHHHHhhhc
Confidence 458999986663
No 18
>3bbn_N Ribosomal protein S14; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=28.02 E-value=5.8 Score=24.03 Aligned_cols=39 Identities=13% Similarity=0.246 Sum_probs=30.7
Q ss_pred eEEEEEecCCCCCC------CceEcCHHHHHhhcC--CCCcEEEEEE
Q 044897 50 SVTVKIVDHCPGCP------STIDLSREAFTQIAN--PVAGIINIDY 88 (90)
Q Consensus 50 sv~v~VvD~Cp~C~------~~lDLs~~aF~~la~--~~~G~v~i~w 88 (90)
+--+++.+.|.-|. ..|.||.-.|..+|. .=+|+..-+|
T Consensus 54 s~~~r~~nRC~~tGR~rg~~r~fglsR~~fRe~a~~g~lpGv~KssW 100 (100)
T 3bbn_N 54 SAPARLHRRCFLTGRPRANIRDFGLSGHILREMVHTCLLPGATRSSW 100 (100)
T ss_dssp CCGGGCCCCCSSSCCSSSBCTTTCSBTTHHHHHHTTTCSSSCEECCC
T ss_pred cccccccccccCCCCCceeecccCcHHHHHHHHHHcCCCCCeeeccC
Confidence 34577889999777 689999999999975 4568877666
No 19
>3r8n_N 30S ribosomal protein S14; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 1p6g_N 1p87_N 2aw7_N 2avy_N 2i2u_N 2i2p_N* 2qan_N* 2qb9_N* 2qbb_N* 2qbd_N 2qbf_N 2qbh_N* 2qbj_N* 2qou_N* 2qow_N* 2qoy_N* 2qp0_N* 2vho_N 2vhp_N 2ykr_N ...
Probab=25.08 E-value=9.5 Score=23.11 Aligned_cols=39 Identities=18% Similarity=0.314 Sum_probs=30.2
Q ss_pred eEEEEEecCCCCCC------CceEcCHHHHHhhc--CCCCcEEEEEE
Q 044897 50 SVTVKIVDHCPGCP------STIDLSREAFTQIA--NPVAGIINIDY 88 (90)
Q Consensus 50 sv~v~VvD~Cp~C~------~~lDLs~~aF~~la--~~~~G~v~i~w 88 (90)
+--+++.+.|.-|. ..|.||.-.|..+| ..=.|+..-+|
T Consensus 54 Ss~~r~~nRC~~tGR~rg~~r~f~lsR~~fRe~a~~g~lpGv~KasW 100 (100)
T 3r8n_N 54 SSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW 100 (100)
T ss_dssp TSGGGCCCCBTTTBCSSSCCGGGTSCHHHHHHHHHHSCSTTEEECCC
T ss_pred cchhhhcccccCCCCCceecCCCCchHHHHHHHHHcCCCCCeeeccC
Confidence 33467788888766 68999999999997 45678887766
No 20
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=21.38 E-value=57 Score=17.11 Aligned_cols=27 Identities=22% Similarity=0.533 Sum_probs=15.6
Q ss_pred CCCCCeEEEEEecCCCCCC-CceEcCHHHH
Q 044897 45 PCTGESVTVKIVDHCPGCP-STIDLSREAF 73 (90)
Q Consensus 45 ~c~g~sv~v~VvD~Cp~C~-~~lDLs~~aF 73 (90)
.|.|..-. +.|.|+.|. ..+-.....|
T Consensus 14 ~C~GsG~~--i~~~C~~C~G~G~v~~~~G~ 41 (53)
T 3lcz_A 14 NCNGSGRE--EPEPCPKCLGKGVILTAQGS 41 (53)
T ss_dssp TTTTSCEE--TTEECTTTTTSSEEECHHHH
T ss_pred CCcccccC--CCCcCCCCCCcEEEEEEeCc
Confidence 46654332 249999999 5444444433
Done!