Query 044899
Match_columns 299
No_of_seqs 442 out of 1954
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 07:53:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044899.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044899hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2931 Differentiation-relate 100.0 1.1E-33 2.4E-38 215.6 23.9 261 1-272 60-325 (326)
2 PF03096 Ndr: Ndr family; Int 100.0 3.4E-32 7.4E-37 211.0 19.5 245 2-251 38-283 (283)
3 PLN02824 hydrolase, alpha/beta 100.0 1.4E-30 3E-35 213.1 21.0 233 9-246 44-293 (294)
4 PLN02965 Probable pheophorbida 100.0 9.8E-30 2.1E-34 203.8 19.6 221 8-248 17-254 (255)
5 PLN02679 hydrolase, alpha/beta 100.0 2.7E-29 5.9E-34 210.2 22.6 231 9-247 103-357 (360)
6 TIGR02240 PHA_depoly_arom poly 100.0 1.3E-29 2.8E-34 205.6 19.2 224 10-248 41-267 (276)
7 KOG4178 Soluble epoxide hydrol 100.0 2.5E-29 5.3E-34 196.9 18.3 239 6-247 56-320 (322)
8 PRK03592 haloalkane dehalogena 100.0 5.1E-29 1.1E-33 204.0 20.5 232 8-248 41-290 (295)
9 PRK11126 2-succinyl-6-hydroxy- 100.0 2.7E-28 5.9E-33 194.2 21.6 221 9-246 17-241 (242)
10 PRK00870 haloalkane dehalogena 100.0 8.1E-29 1.8E-33 203.4 18.5 225 10-247 62-301 (302)
11 TIGR02427 protocat_pcaD 3-oxoa 100.0 5.2E-28 1.1E-32 193.1 21.5 221 10-245 29-251 (251)
12 PRK10349 carboxylesterase BioH 100.0 3.1E-28 6.6E-33 195.4 20.2 222 9-246 28-255 (256)
13 PRK10673 acyl-CoA esterase; Pr 100.0 6E-28 1.3E-32 193.8 21.9 219 10-246 32-254 (255)
14 KOG4409 Predicted hydrolase/ac 100.0 3.4E-28 7.3E-33 191.1 19.7 230 14-246 110-363 (365)
15 TIGR03343 biphenyl_bphD 2-hydr 100.0 5.7E-28 1.2E-32 196.8 21.5 221 13-245 53-281 (282)
16 PRK06489 hypothetical protein; 100.0 1.3E-27 2.8E-32 200.5 24.0 226 17-248 102-358 (360)
17 PRK07581 hypothetical protein; 100.0 7.8E-28 1.7E-32 200.6 22.1 226 18-247 69-336 (339)
18 PRK08775 homoserine O-acetyltr 100.0 1.7E-27 3.8E-32 198.5 21.6 220 18-248 97-340 (343)
19 TIGR03611 RutD pyrimidine util 100.0 3.9E-27 8.4E-32 189.0 22.3 224 11-245 30-256 (257)
20 PLN03087 BODYGUARD 1 domain co 100.0 2.9E-27 6.3E-32 200.9 22.4 224 18-246 230-478 (481)
21 PF12697 Abhydrolase_6: Alpha/ 100.0 4E-27 8.7E-32 185.1 21.6 211 9-239 13-228 (228)
22 PLN02578 hydrolase 100.0 4.5E-27 9.8E-32 196.6 23.0 228 9-245 101-353 (354)
23 PLN02385 hydrolase; alpha/beta 100.0 7.4E-28 1.6E-32 201.3 17.1 224 11-247 105-345 (349)
24 PLN03084 alpha/beta hydrolase 100.0 1.2E-26 2.6E-31 193.5 23.3 230 8-245 141-382 (383)
25 PRK03204 haloalkane dehalogena 100.0 6.6E-27 1.4E-31 190.1 20.6 224 10-244 50-285 (286)
26 TIGR03056 bchO_mg_che_rel puta 100.0 1E-26 2.2E-31 189.0 19.9 224 10-245 44-278 (278)
27 TIGR01392 homoserO_Ac_trn homo 100.0 2.8E-26 6.1E-31 191.8 22.4 229 15-245 67-351 (351)
28 PRK00175 metX homoserine O-ace 100.0 3.3E-26 7.1E-31 192.8 23.0 234 15-248 86-375 (379)
29 PRK10749 lysophospholipase L2; 100.0 1.5E-26 3.2E-31 191.8 20.3 234 12-247 72-329 (330)
30 TIGR01738 bioH putative pimelo 100.0 1.6E-26 3.4E-31 184.0 19.7 216 10-244 20-245 (245)
31 TIGR03695 menH_SHCHC 2-succiny 99.9 3.1E-26 6.7E-31 182.7 20.2 227 10-245 17-251 (251)
32 TIGR01250 pro_imino_pep_2 prol 99.9 2E-25 4.3E-30 182.0 21.3 223 11-245 43-288 (288)
33 PHA02857 monoglyceride lipase; 99.9 4.7E-26 1E-30 184.8 17.4 223 10-247 41-273 (276)
34 KOG1454 Predicted hydrolase/ac 99.9 2.8E-26 6E-31 187.2 13.6 237 6-247 70-324 (326)
35 PLN02980 2-oxoglutarate decarb 99.9 8.6E-25 1.9E-29 211.1 25.3 233 10-248 1387-1640(1655)
36 PLN02298 hydrolase, alpha/beta 99.9 3.4E-25 7.4E-30 184.2 19.5 222 10-247 76-317 (330)
37 PLN02894 hydrolase, alpha/beta 99.9 1.9E-24 4.2E-29 182.8 23.2 235 13-248 124-386 (402)
38 PF00561 Abhydrolase_1: alpha/ 99.9 2.3E-24 5E-29 170.1 18.7 214 21-241 1-229 (230)
39 PRK06765 homoserine O-acetyltr 99.9 1.3E-23 2.8E-28 175.7 23.7 228 18-246 97-387 (389)
40 PRK14875 acetoin dehydrogenase 99.9 6.7E-24 1.4E-28 179.5 20.8 219 10-246 147-370 (371)
41 PLN02211 methyl indole-3-aceta 99.9 5.6E-24 1.2E-28 171.4 18.7 222 9-247 33-270 (273)
42 KOG2984 Predicted hydrolase [G 99.9 1.4E-24 3E-29 157.0 12.7 208 11-247 61-276 (277)
43 COG2267 PldB Lysophospholipase 99.9 9.7E-24 2.1E-28 170.7 18.3 229 13-247 54-294 (298)
44 KOG1455 Lysophospholipase [Lip 99.9 3.6E-24 7.8E-29 165.4 14.8 221 13-247 75-312 (313)
45 PLN02652 hydrolase; alpha/beta 99.9 5.3E-23 1.1E-27 172.7 19.4 222 10-247 152-387 (395)
46 TIGR01249 pro_imino_pep_1 prol 99.9 4E-22 8.7E-27 163.8 21.9 82 18-101 51-132 (306)
47 COG1647 Esterase/lipase [Gener 99.9 6.7E-22 1.5E-26 145.6 17.3 213 3-246 20-243 (243)
48 PLN02511 hydrolase 99.9 7.1E-22 1.5E-26 166.6 16.9 223 14-248 123-366 (388)
49 TIGR01607 PST-A Plasmodium sub 99.9 1.4E-21 3.1E-26 161.6 17.4 219 13-245 66-331 (332)
50 TIGR03100 hydr1_PEP hydrolase, 99.9 2.4E-21 5.3E-26 156.3 17.2 211 12-245 48-273 (274)
51 PRK05855 short chain dehydroge 99.9 1.2E-21 2.5E-26 175.5 16.0 228 10-248 41-293 (582)
52 KOG2382 Predicted alpha/beta h 99.9 3.2E-20 6.9E-25 146.0 19.4 225 8-247 66-313 (315)
53 PRK10985 putative hydrolase; P 99.9 5.5E-20 1.2E-24 152.1 18.5 222 14-247 81-320 (324)
54 TIGR01836 PHA_synth_III_C poly 99.8 4.9E-19 1.1E-23 148.2 21.0 222 13-246 87-349 (350)
55 PRK05077 frsA fermentation/res 99.8 1.2E-18 2.7E-23 147.6 18.7 189 15-247 217-412 (414)
56 TIGR01838 PHA_synth_I poly(R)- 99.8 2.1E-18 4.5E-23 148.5 18.6 214 13-235 213-463 (532)
57 PRK13604 luxD acyl transferase 99.8 5.3E-18 1.2E-22 135.0 14.4 194 11-247 54-259 (307)
58 COG0596 MhpC Predicted hydrola 99.8 3E-17 6.6E-22 131.7 16.4 216 21-245 51-280 (282)
59 PLN02872 triacylglycerol lipas 99.7 6.6E-17 1.4E-21 135.5 16.3 225 16-247 103-389 (395)
60 COG2021 MET2 Homoserine acetyl 99.7 9.1E-16 2E-20 122.8 21.2 228 18-246 90-367 (368)
61 PF00326 Peptidase_S9: Prolyl 99.7 4.5E-17 9.8E-22 126.9 12.2 187 16-247 10-209 (213)
62 KOG1552 Predicted alpha/beta h 99.7 3.4E-17 7.3E-22 124.6 10.8 158 20-247 88-252 (258)
63 KOG2564 Predicted acetyltransf 99.7 2.8E-17 6E-22 125.4 10.1 218 20-252 102-332 (343)
64 PRK10566 esterase; Provisional 99.7 3.2E-16 7E-21 125.2 16.9 186 13-247 46-248 (249)
65 COG3208 GrsT Predicted thioest 99.7 9.8E-16 2.1E-20 115.9 17.1 202 11-246 24-235 (244)
66 PRK11071 esterase YqiA; Provis 99.7 2.1E-16 4.6E-21 120.1 13.4 156 20-245 32-189 (190)
67 PRK07868 acyl-CoA synthetase; 99.7 8.7E-15 1.9E-19 137.7 23.9 221 16-248 95-362 (994)
68 PF06342 DUF1057: Alpha/beta h 99.6 2.6E-13 5.5E-18 105.0 21.6 219 6-244 47-296 (297)
69 PF12695 Abhydrolase_5: Alpha/ 99.6 9.1E-15 2E-19 106.8 12.9 123 15-227 21-145 (145)
70 KOG4391 Predicted alpha/beta h 99.6 8.6E-16 1.9E-20 113.0 5.9 174 19-251 105-286 (300)
71 TIGR01849 PHB_depoly_PhaZ poly 99.6 3.2E-13 6.9E-18 112.3 18.6 226 13-246 123-405 (406)
72 TIGR03101 hydr2_PEP hydrolase, 99.6 4.7E-14 1E-18 111.9 12.3 84 14-101 49-136 (266)
73 COG0429 Predicted hydrolase of 99.6 2E-13 4.4E-18 107.8 15.6 216 15-247 99-340 (345)
74 KOG1838 Alpha/beta hydrolase [ 99.6 8.3E-13 1.8E-17 108.1 18.4 227 14-247 148-388 (409)
75 TIGR01839 PHA_synth_II poly(R) 99.5 4.1E-13 8.9E-18 114.9 16.6 200 12-230 239-484 (560)
76 KOG4667 Predicted esterase [Li 99.5 1.3E-13 2.9E-18 101.5 11.7 189 18-245 60-256 (269)
77 TIGR02821 fghA_ester_D S-formy 99.5 4.1E-12 8.8E-17 102.8 17.2 82 19-100 71-174 (275)
78 PLN02442 S-formylglutathione h 99.5 2.8E-12 6.1E-17 103.9 15.6 133 48-229 127-264 (283)
79 COG1506 DAP2 Dipeptidyl aminop 99.4 1.7E-12 3.6E-17 116.2 13.6 191 11-247 414-616 (620)
80 PF00975 Thioesterase: Thioest 99.4 5.8E-11 1.3E-15 93.6 19.9 208 6-244 12-229 (229)
81 COG2945 Predicted hydrolase of 99.4 8.7E-12 1.9E-16 90.6 13.5 145 16-245 56-205 (210)
82 COG4757 Predicted alpha/beta h 99.4 1.7E-12 3.6E-17 96.9 9.9 222 10-244 46-280 (281)
83 PF08538 DUF1749: Protein of u 99.4 3.1E-12 6.7E-17 101.3 11.2 222 10-245 52-303 (303)
84 PRK05371 x-prolyl-dipeptidyl a 99.4 2.2E-11 4.7E-16 110.6 17.6 217 14-246 273-518 (767)
85 TIGR00976 /NonD putative hydro 99.4 1.5E-11 3.3E-16 108.9 14.8 82 14-100 47-133 (550)
86 PF06500 DUF1100: Alpha/beta h 99.4 5.3E-11 1.1E-15 98.4 16.6 187 16-246 214-408 (411)
87 TIGR03230 lipo_lipase lipoprot 99.4 5E-12 1.1E-16 106.4 10.1 77 20-100 73-155 (442)
88 PLN00021 chlorophyllase 99.3 3.2E-11 6.9E-16 98.5 13.4 84 10-100 68-167 (313)
89 PF05448 AXE1: Acetyl xylan es 99.3 3E-10 6.4E-15 93.0 18.5 192 14-246 103-319 (320)
90 PRK11460 putative hydrolase; P 99.3 9.8E-11 2.1E-15 92.1 13.7 103 64-244 103-209 (232)
91 PRK10162 acetyl esterase; Prov 99.3 3.2E-10 7E-15 93.6 16.6 194 12-247 102-315 (318)
92 PF01738 DLH: Dienelactone hyd 99.2 1.4E-10 2.9E-15 90.7 11.8 154 17-246 38-216 (218)
93 KOG2565 Predicted hydrolases o 99.2 7.1E-10 1.5E-14 88.7 15.4 77 21-100 189-265 (469)
94 TIGR01840 esterase_phb esteras 99.2 2.7E-10 5.9E-15 88.6 11.1 82 19-100 42-131 (212)
95 COG0412 Dienelactone hydrolase 99.2 8.6E-10 1.9E-14 86.5 13.4 168 3-247 36-233 (236)
96 COG3243 PhaC Poly(3-hydroxyalk 99.2 5.9E-10 1.3E-14 91.1 12.4 83 12-101 131-219 (445)
97 PF06821 Ser_hydrolase: Serine 99.1 4.2E-10 9.1E-15 83.6 9.3 136 13-231 19-157 (171)
98 cd00707 Pancreat_lipase_like P 99.1 1E-10 2.2E-15 94.2 6.4 81 16-100 61-148 (275)
99 PF02230 Abhydrolase_2: Phosph 99.1 1.1E-09 2.5E-14 85.3 12.0 123 47-246 83-214 (216)
100 PF02129 Peptidase_S15: X-Pro 99.1 1.7E-09 3.7E-14 87.4 12.8 80 16-100 53-137 (272)
101 PF05728 UPF0227: Uncharacteri 99.1 4.1E-09 8.8E-14 79.2 13.6 143 46-244 41-186 (187)
102 PF10230 DUF2305: Uncharacteri 99.1 4.5E-08 9.8E-13 78.4 20.4 85 17-101 29-124 (266)
103 PF07859 Abhydrolase_3: alpha/ 99.1 1.9E-09 4E-14 83.9 11.3 81 14-101 22-112 (211)
104 COG3458 Acetyl esterase (deace 99.1 3.2E-09 7E-14 81.6 11.8 190 13-247 102-317 (321)
105 COG0400 Predicted esterase [Ge 99.0 5E-09 1.1E-13 79.7 11.2 118 49-247 82-205 (207)
106 PF09752 DUF2048: Uncharacteri 99.0 8.9E-09 1.9E-13 83.1 13.1 218 14-245 115-347 (348)
107 COG3545 Predicted esterase of 99.0 1.7E-08 3.7E-13 72.8 12.9 135 43-246 39-178 (181)
108 PRK10252 entF enterobactin syn 99.0 6.1E-09 1.3E-13 102.1 14.3 85 9-99 1083-1171(1296)
109 PF06057 VirJ: Bacterial virul 99.0 6.2E-09 1.3E-13 76.8 10.4 161 13-246 21-191 (192)
110 PF08840 BAAT_C: BAAT / Acyl-C 99.0 2.7E-10 5.9E-15 88.1 3.2 49 51-100 6-57 (213)
111 PRK10115 protease 2; Provision 99.0 1.2E-08 2.6E-13 92.3 13.3 176 11-228 465-654 (686)
112 PF02273 Acyl_transf_2: Acyl t 99.0 7.4E-08 1.6E-12 73.2 15.0 184 10-234 46-243 (294)
113 smart00824 PKS_TE Thioesterase 98.9 6.7E-08 1.4E-12 74.9 15.3 85 10-100 15-103 (212)
114 COG3571 Predicted hydrolase of 98.9 1E-07 2.2E-12 67.4 13.6 163 14-247 37-211 (213)
115 PTZ00472 serine carboxypeptida 98.9 4.1E-07 9E-12 78.6 19.1 80 19-100 120-217 (462)
116 COG3319 Thioesterase domains o 98.9 4.5E-07 9.8E-12 71.3 16.9 93 2-100 4-104 (257)
117 PLN02733 phosphatidylcholine-s 98.8 6.7E-09 1.5E-13 88.2 6.5 90 9-101 109-203 (440)
118 TIGR03502 lipase_Pla1_cef extr 98.8 2.1E-08 4.6E-13 90.1 8.8 74 11-84 466-575 (792)
119 PF03583 LIP: Secretory lipase 98.8 7.1E-07 1.5E-11 72.5 16.3 86 12-99 18-113 (290)
120 KOG3043 Predicted hydrolase re 98.7 4.3E-08 9.2E-13 73.5 6.0 151 18-247 65-240 (242)
121 PF05677 DUF818: Chlamydia CHL 98.7 1.6E-06 3.4E-11 69.7 14.2 60 19-85 170-236 (365)
122 PF12715 Abhydrolase_7: Abhydr 98.6 2E-07 4.3E-12 76.3 9.3 85 14-99 154-260 (390)
123 KOG2100 Dipeptidyl aminopeptid 98.6 4.7E-07 1E-11 82.6 11.8 180 17-247 555-747 (755)
124 KOG1515 Arylacetamide deacetyl 98.6 2.8E-06 6.1E-11 69.7 14.4 194 19-247 122-335 (336)
125 KOG1553 Predicted alpha/beta h 98.6 1.5E-07 3.3E-12 74.9 6.1 82 14-100 262-346 (517)
126 KOG2281 Dipeptidyl aminopeptid 98.5 8.8E-07 1.9E-11 76.2 10.8 186 13-246 669-866 (867)
127 KOG4627 Kynurenine formamidase 98.5 1.3E-06 2.8E-11 64.7 10.1 165 15-244 92-268 (270)
128 COG0657 Aes Esterase/lipase [L 98.5 2.7E-06 5.8E-11 70.4 13.4 171 18-229 108-289 (312)
129 PF11339 DUF3141: Protein of u 98.5 8.3E-06 1.8E-10 69.1 15.9 86 6-100 86-176 (581)
130 KOG4840 Predicted hydrolases o 98.5 1.1E-06 2.5E-11 65.8 9.5 81 13-100 59-145 (299)
131 KOG2624 Triglyceride lipase-ch 98.5 5E-06 1.1E-10 69.7 14.0 85 17-101 103-201 (403)
132 PF12146 Hydrolase_4: Putative 98.4 5.8E-07 1.3E-11 57.5 4.8 44 13-59 35-79 (79)
133 PRK04940 hypothetical protein; 98.4 4.5E-05 9.8E-10 56.4 15.1 52 47-101 39-94 (180)
134 PF12740 Chlorophyllase2: Chlo 98.4 3.4E-06 7.5E-11 66.1 9.7 86 10-99 33-131 (259)
135 PF06028 DUF915: Alpha/beta hy 98.4 2.8E-06 6E-11 67.2 9.2 55 46-100 81-144 (255)
136 PF07819 PGAP1: PGAP1-like pro 98.4 4.9E-06 1.1E-10 64.9 10.5 77 19-102 38-126 (225)
137 PF03959 FSH1: Serine hydrolas 98.3 5.7E-06 1.2E-10 64.2 9.1 111 46-231 85-205 (212)
138 COG2936 Predicted acyl esteras 98.3 3.2E-06 7E-11 73.0 7.8 80 16-100 76-160 (563)
139 KOG2551 Phospholipase/carboxyh 98.3 1.8E-05 3.8E-10 59.7 10.5 58 185-247 161-220 (230)
140 PF10142 PhoPQ_related: PhoPQ- 98.2 6.1E-05 1.3E-09 62.5 14.1 156 54-248 159-321 (367)
141 PF10503 Esterase_phd: Esteras 98.2 4.3E-05 9.4E-10 59.0 12.1 82 19-100 45-133 (220)
142 KOG3975 Uncharacterized conser 98.2 0.00013 2.8E-09 56.0 14.0 220 19-245 58-301 (301)
143 KOG3253 Predicted alpha/beta h 98.1 1.6E-05 3.5E-10 68.3 9.0 144 6-230 194-348 (784)
144 PF03403 PAF-AH_p_II: Platelet 98.0 1.2E-05 2.6E-10 67.8 6.7 35 64-99 228-262 (379)
145 COG4188 Predicted dienelactone 98.0 4.4E-06 9.5E-11 68.1 3.5 57 180-236 244-303 (365)
146 KOG1551 Uncharacterized conser 98.0 0.00024 5.1E-09 55.1 11.9 56 190-248 309-367 (371)
147 PF04301 DUF452: Protein of un 98.0 0.00039 8.5E-09 53.1 12.7 74 3-101 16-92 (213)
148 PF00450 Peptidase_S10: Serine 97.9 0.0033 7.1E-08 54.3 19.5 83 18-101 83-183 (415)
149 PRK10439 enterobactin/ferric e 97.9 0.00016 3.5E-09 61.7 11.0 50 49-98 268-322 (411)
150 PF00151 Lipase: Lipase; Inte 97.8 1.2E-05 2.7E-10 66.3 2.3 78 19-100 103-188 (331)
151 PF05705 DUF829: Eukaryotic pr 97.8 0.0012 2.7E-08 52.3 13.5 60 185-244 176-240 (240)
152 PF05577 Peptidase_S28: Serine 97.8 0.00011 2.4E-09 63.7 8.0 82 20-101 59-150 (434)
153 PF05990 DUF900: Alpha/beta hy 97.7 0.0001 2.2E-09 58.0 6.7 85 13-100 41-138 (233)
154 PLN02213 sinapoylglucose-malat 97.7 0.006 1.3E-07 50.6 17.4 78 21-100 2-97 (319)
155 PF08386 Abhydrolase_4: TAP-li 97.7 0.00016 3.4E-09 49.0 6.3 58 187-246 34-93 (103)
156 COG1073 Hydrolases of the alph 97.7 1.6E-05 3.6E-10 64.9 1.7 71 177-247 221-297 (299)
157 KOG2112 Lysophospholipase [Lip 97.6 0.00097 2.1E-08 50.1 9.8 54 45-98 69-127 (206)
158 COG1770 PtrB Protease II [Amin 97.6 0.0022 4.9E-08 56.3 13.2 98 2-100 460-563 (682)
159 cd00741 Lipase Lipase. Lipase 97.6 0.00032 6.9E-09 51.4 7.0 52 48-99 8-67 (153)
160 COG4099 Predicted peptidase [G 97.5 0.00047 1E-08 54.5 7.7 42 58-99 261-304 (387)
161 COG3946 VirJ Type IV secretory 97.5 0.001 2.2E-08 55.0 9.6 65 13-86 279-348 (456)
162 PF01764 Lipase_3: Lipase (cla 97.5 0.0005 1.1E-08 49.5 7.3 39 48-86 48-86 (140)
163 PF01674 Lipase_2: Lipase (cla 97.5 8.7E-05 1.9E-09 57.3 3.0 70 13-83 21-94 (219)
164 PF07224 Chlorophyllase: Chlor 97.4 0.00032 6.8E-09 54.5 4.9 84 14-101 67-159 (307)
165 PLN03016 sinapoylglucose-malat 97.4 0.025 5.5E-07 48.8 16.8 80 19-100 114-211 (433)
166 PF12048 DUF3530: Protein of u 97.4 0.0047 1E-07 50.8 11.8 44 57-100 186-230 (310)
167 PF00756 Esterase: Putative es 97.3 0.00037 8E-09 55.7 4.8 53 49-101 97-152 (251)
168 KOG3847 Phospholipase A2 (plat 97.2 0.0012 2.6E-08 52.6 6.8 33 65-98 242-274 (399)
169 COG4782 Uncharacterized protei 97.2 0.0017 3.6E-08 53.1 7.6 90 11-100 137-235 (377)
170 PF02450 LCAT: Lecithin:choles 97.2 0.00073 1.6E-08 57.5 5.7 54 47-100 99-161 (389)
171 COG1075 LipA Predicted acetylt 97.2 0.00089 1.9E-08 55.8 5.9 73 23-101 92-166 (336)
172 PLN02209 serine carboxypeptida 97.2 0.032 6.9E-07 48.3 15.2 80 19-100 116-213 (437)
173 COG4553 DepA Poly-beta-hydroxy 97.2 0.028 6.1E-07 44.7 13.3 82 15-101 125-211 (415)
174 cd00519 Lipase_3 Lipase (class 97.1 0.0016 3.5E-08 51.2 6.5 25 62-86 126-150 (229)
175 COG3509 LpqC Poly(3-hydroxybut 97.1 0.0034 7.5E-08 49.9 7.9 81 19-99 90-179 (312)
176 KOG2183 Prolylcarboxypeptidase 97.0 0.0018 4E-08 53.7 6.2 79 20-98 111-201 (492)
177 PF10340 DUF2424: Protein of u 97.0 0.016 3.6E-07 48.3 11.6 80 20-102 154-238 (374)
178 PF11187 DUF2974: Protein of u 96.9 0.0035 7.7E-08 48.8 6.7 37 64-100 84-124 (224)
179 PLN02454 triacylglycerol lipas 96.9 0.0032 7E-08 53.0 6.8 34 52-85 214-249 (414)
180 PLN02517 phosphatidylcholine-s 96.9 0.0027 5.9E-08 55.5 6.5 52 48-99 193-263 (642)
181 KOG3724 Negative regulator of 96.9 0.003 6.5E-08 56.6 6.5 77 16-99 128-220 (973)
182 COG2819 Predicted hydrolase of 96.9 0.0022 4.7E-08 50.4 5.1 50 50-99 120-172 (264)
183 PF05576 Peptidase_S37: PS-10 96.8 0.006 1.3E-07 50.9 7.2 78 20-98 88-168 (448)
184 PLN02571 triacylglycerol lipas 96.8 0.0044 9.6E-08 52.2 6.5 38 48-85 208-247 (413)
185 PLN02606 palmitoyl-protein thi 96.7 0.06 1.3E-06 43.6 12.1 53 46-99 75-132 (306)
186 KOG3101 Esterase D [General fu 96.7 0.0018 3.9E-08 48.7 3.3 51 51-101 124-178 (283)
187 COG2382 Fes Enterochelin ester 96.6 0.0049 1.1E-07 49.2 5.3 36 65-100 178-213 (299)
188 PLN02162 triacylglycerol lipas 96.6 0.0062 1.3E-07 51.9 6.1 35 49-83 263-297 (475)
189 cd00312 Esterase_lipase Estera 96.5 0.011 2.4E-07 52.4 7.7 79 20-100 125-214 (493)
190 PLN02633 palmitoyl protein thi 96.5 0.11 2.3E-06 42.2 12.2 54 45-99 73-131 (314)
191 PLN00413 triacylglycerol lipas 96.5 0.0093 2E-07 51.0 6.6 35 49-83 269-303 (479)
192 PF01083 Cutinase: Cutinase; 96.5 0.015 3.2E-07 43.8 7.0 51 50-100 67-123 (179)
193 PLN02408 phospholipase A1 96.4 0.01 2.2E-07 49.4 6.3 38 50-87 184-223 (365)
194 PF05057 DUF676: Putative seri 96.4 0.0042 9.1E-08 48.4 3.9 34 50-83 62-97 (217)
195 COG0627 Predicted esterase [Ge 96.3 0.0046 1E-07 50.7 4.0 58 45-102 127-190 (316)
196 COG4814 Uncharacterized protei 96.3 0.0097 2.1E-07 46.2 5.4 56 45-100 113-177 (288)
197 PF11288 DUF3089: Protein of u 96.3 0.012 2.6E-07 44.9 5.7 41 45-85 75-116 (207)
198 PF06259 Abhydrolase_8: Alpha/ 96.1 0.015 3.4E-07 43.3 5.5 54 47-100 87-145 (177)
199 KOG2182 Hydrolytic enzymes of 96.1 0.023 5E-07 48.6 6.7 81 20-100 118-208 (514)
200 PLN02324 triacylglycerol lipas 96.0 0.021 4.5E-07 48.2 6.3 36 50-85 199-236 (415)
201 COG3150 Predicted esterase [Ge 96.0 0.018 3.9E-07 41.8 5.1 54 44-100 39-92 (191)
202 PLN02934 triacylglycerol lipas 95.9 0.015 3.3E-07 50.1 5.2 36 49-84 306-341 (515)
203 PF05277 DUF726: Protein of un 95.8 0.039 8.5E-07 45.8 6.8 41 61-101 217-262 (345)
204 PLN02719 triacylglycerol lipas 95.7 0.035 7.7E-07 48.0 6.5 36 50-85 279-319 (518)
205 PLN02753 triacylglycerol lipas 95.7 0.035 7.7E-07 48.2 6.5 36 50-85 293-333 (531)
206 PLN02802 triacylglycerol lipas 95.7 0.033 7.2E-07 48.1 6.2 36 50-85 314-351 (509)
207 KOG2369 Lecithin:cholesterol a 95.6 0.019 4.2E-07 48.8 4.6 53 46-98 164-224 (473)
208 PLN02310 triacylglycerol lipas 95.6 0.026 5.6E-07 47.7 5.1 37 49-85 190-230 (405)
209 PLN03037 lipase class 3 family 95.5 0.049 1.1E-06 47.2 6.5 36 50-85 300-339 (525)
210 KOG2237 Predicted serine prote 95.2 0.22 4.7E-06 44.3 9.7 86 15-100 494-585 (712)
211 KOG3967 Uncharacterized conser 95.2 0.15 3.3E-06 38.7 7.6 90 9-100 133-228 (297)
212 COG4287 PqaA PhoPQ-activated p 95.1 0.3 6.6E-06 40.4 9.6 64 184-251 326-391 (507)
213 PF07519 Tannase: Tannase and 95.1 0.093 2E-06 46.0 7.3 87 13-100 52-151 (474)
214 PLN02761 lipase class 3 family 95.0 0.048 1E-06 47.3 5.1 35 50-84 274-314 (527)
215 KOG1202 Animal-type fatty acid 94.8 3.7 8E-05 40.0 16.6 57 44-100 2161-2220(2376)
216 COG2272 PnbA Carboxylesterase 94.8 0.22 4.9E-06 42.9 8.5 96 2-100 109-218 (491)
217 COG1505 Serine proteases of th 94.7 0.071 1.5E-06 46.8 5.4 88 11-99 441-535 (648)
218 PLN02847 triacylglycerol lipas 94.6 0.073 1.6E-06 47.0 5.4 24 62-85 249-272 (633)
219 PF07082 DUF1350: Protein of u 94.5 0.29 6.4E-06 38.4 7.8 34 65-98 91-124 (250)
220 KOG4569 Predicted lipase [Lipi 94.4 0.084 1.8E-06 44.1 5.1 38 48-85 155-192 (336)
221 PF06850 PHB_depo_C: PHB de-po 94.2 0.066 1.4E-06 40.1 3.6 63 184-246 130-201 (202)
222 PF11144 DUF2920: Protein of u 93.7 0.14 3E-06 43.2 5.1 36 65-100 185-220 (403)
223 KOG2541 Palmitoyl protein thio 93.4 1 2.2E-05 35.8 8.9 79 13-98 44-127 (296)
224 KOG2029 Uncharacterized conser 93.0 0.17 3.7E-06 44.4 4.7 56 45-100 504-573 (697)
225 PF08237 PE-PPE: PE-PPE domain 93.0 0.62 1.3E-05 36.5 7.4 63 20-85 2-69 (225)
226 COG2939 Carboxypeptidase C (ca 91.5 0.6 1.3E-05 40.5 6.1 78 20-99 146-236 (498)
227 PF00135 COesterase: Carboxyle 91.1 0.59 1.3E-05 41.8 6.2 82 17-100 153-246 (535)
228 KOG4540 Putative lipase essent 90.9 0.51 1.1E-05 37.6 4.7 25 61-85 273-297 (425)
229 COG5153 CVT17 Putative lipase 90.9 0.51 1.1E-05 37.6 4.7 25 61-85 273-297 (425)
230 PF02089 Palm_thioest: Palmito 90.6 0.87 1.9E-05 36.7 5.9 78 18-99 35-116 (279)
231 COG4947 Uncharacterized protei 90.3 0.4 8.6E-06 35.2 3.4 43 57-99 94-136 (227)
232 KOG1282 Serine carboxypeptidas 89.2 2.1 4.6E-05 37.2 7.5 80 20-100 117-214 (454)
233 COG2830 Uncharacterized protei 86.9 6.4 0.00014 28.8 7.5 34 64-99 57-90 (214)
234 cd01714 ETF_beta The electron 84.3 5.9 0.00013 30.5 7.0 66 18-95 74-145 (202)
235 KOG2385 Uncharacterized conser 83.2 3.9 8.5E-05 35.8 6.0 42 60-101 443-489 (633)
236 smart00827 PKS_AT Acyl transfe 80.0 2.5 5.4E-05 34.7 3.8 30 54-83 72-101 (298)
237 PF00698 Acyl_transf_1: Acyl t 79.5 1.6 3.5E-05 36.2 2.6 29 54-82 74-102 (318)
238 TIGR03131 malonate_mdcH malona 79.0 2.9 6.2E-05 34.3 3.9 30 54-83 66-95 (295)
239 PF09949 DUF2183: Uncharacteri 78.6 11 0.00024 25.2 5.8 83 9-94 12-97 (100)
240 PRK10279 hypothetical protein; 77.5 3.5 7.6E-05 33.9 3.9 33 54-86 23-55 (300)
241 PF10081 Abhydrolase_9: Alpha/ 77.3 6.1 0.00013 31.9 5.0 54 51-104 93-152 (289)
242 TIGR00128 fabD malonyl CoA-acy 76.4 3.5 7.6E-05 33.6 3.7 30 54-83 72-102 (290)
243 cd07198 Patatin Patatin-like p 75.8 4.3 9.2E-05 30.2 3.7 32 54-85 16-47 (172)
244 KOG1282 Serine carboxypeptidas 75.8 8.3 0.00018 33.7 5.8 62 187-248 363-449 (454)
245 COG1752 RssA Predicted esteras 74.6 4.5 9.7E-05 33.4 3.9 33 53-85 28-60 (306)
246 cd07225 Pat_PNPLA6_PNPLA7 Pata 73.9 5 0.00011 33.2 3.9 33 53-85 32-64 (306)
247 KOG4372 Predicted alpha/beta h 72.7 1.5 3.2E-05 37.1 0.6 33 49-81 135-167 (405)
248 KOG1283 Serine carboxypeptidas 72.7 12 0.00027 30.8 5.6 79 21-100 72-167 (414)
249 cd07207 Pat_ExoU_VipD_like Exo 72.3 5.7 0.00012 30.2 3.7 32 54-85 17-48 (194)
250 cd07227 Pat_Fungal_NTE1 Fungal 71.6 6.3 0.00014 31.9 3.9 32 54-85 28-59 (269)
251 cd07210 Pat_hypo_W_succinogene 70.7 6.9 0.00015 30.6 3.9 31 55-85 19-49 (221)
252 PF07519 Tannase: Tannase and 70.1 12 0.00027 33.1 5.7 63 185-247 351-427 (474)
253 cd07230 Pat_TGL4-5_like Triacy 68.4 6 0.00013 34.3 3.4 38 54-91 91-128 (421)
254 PF03283 PAE: Pectinacetyleste 67.6 33 0.00072 29.2 7.5 35 64-98 156-194 (361)
255 cd07228 Pat_NTE_like_bacteria 67.5 9.5 0.00021 28.5 4.0 31 56-86 20-50 (175)
256 PF00448 SRP54: SRP54-type pro 66.8 45 0.00097 25.5 7.5 67 18-96 81-149 (196)
257 TIGR02816 pfaB_fam PfaB family 65.9 7.9 0.00017 34.7 3.7 32 54-85 254-286 (538)
258 cd07231 Pat_SDP1-like Sugar-De 65.9 8 0.00017 32.0 3.4 39 54-92 86-124 (323)
259 PF11713 Peptidase_C80: Peptid 65.8 5.9 0.00013 29.1 2.5 50 26-76 59-116 (157)
260 cd07229 Pat_TGL3_like Triacylg 65.5 6.7 0.00014 33.5 3.0 40 54-93 101-140 (391)
261 cd07232 Pat_PLPL Patain-like p 65.5 6.5 0.00014 33.9 3.0 40 54-93 85-124 (407)
262 KOG1516 Carboxylesterase and r 64.9 15 0.00033 33.1 5.5 58 43-100 169-233 (545)
263 KOG2521 Uncharacterized conser 64.9 86 0.0019 26.5 12.2 213 17-248 63-291 (350)
264 cd07209 Pat_hypo_Ecoli_Z1214_l 64.9 10 0.00022 29.5 3.7 33 54-86 16-48 (215)
265 COG1576 Uncharacterized conser 64.4 29 0.00062 25.3 5.5 54 13-79 60-113 (155)
266 PF02590 SPOUT_MTase: Predicte 62.5 18 0.00038 26.5 4.4 68 15-100 62-129 (155)
267 cd07205 Pat_PNPLA6_PNPLA7_NTE1 60.7 17 0.00038 27.0 4.3 31 55-85 19-49 (175)
268 COG0541 Ffh Signal recognition 58.2 72 0.0016 27.8 7.7 69 16-96 178-248 (451)
269 TIGR01425 SRP54_euk signal rec 55.5 67 0.0014 28.1 7.3 65 19-95 181-247 (429)
270 PRK14974 cell division protein 55.3 66 0.0014 27.1 7.1 67 17-95 219-287 (336)
271 PRK00103 rRNA large subunit me 54.8 52 0.0011 24.2 5.7 66 17-100 64-129 (157)
272 cd07208 Pat_hypo_Ecoli_yjju_li 54.5 20 0.00042 28.9 3.9 34 54-87 16-50 (266)
273 cd07224 Pat_like Patatin-like 51.4 24 0.00051 27.9 3.8 32 54-85 17-50 (233)
274 cd07206 Pat_TGL3-4-5_SDP1 Tria 51.1 25 0.00054 28.9 3.9 31 59-89 92-122 (298)
275 TIGR03712 acc_sec_asp2 accesso 48.0 2E+02 0.0044 25.6 12.3 49 49-99 340-390 (511)
276 cd07212 Pat_PNPLA9 Patatin-lik 46.3 42 0.0009 27.9 4.6 19 67-85 35-53 (312)
277 cd07204 Pat_PNPLA_like Patatin 45.7 36 0.00077 27.1 4.0 19 67-85 34-52 (243)
278 TIGR00959 ffh signal recogniti 44.4 1.5E+02 0.0032 26.1 7.7 66 18-95 180-247 (428)
279 TIGR00064 ftsY signal recognit 43.0 1.6E+02 0.0035 24.0 7.4 68 17-96 151-226 (272)
280 PF09994 DUF2235: Uncharacteri 42.5 56 0.0012 26.6 4.8 39 46-84 72-112 (277)
281 cd07222 Pat_PNPLA4 Patatin-lik 41.4 34 0.00073 27.3 3.3 17 67-83 34-50 (246)
282 PRK12467 peptide synthase; Pro 41.2 1.1E+02 0.0023 35.7 7.9 82 9-96 3707-3792(3956)
283 cd01819 Patatin_and_cPLA2 Pata 40.9 51 0.0011 24.0 3.9 25 58-82 20-46 (155)
284 PF07521 RMMBL: RNA-metabolisi 40.6 62 0.0014 17.6 3.6 33 20-69 6-38 (43)
285 PF00070 Pyr_redox: Pyridine n 40.1 92 0.002 19.4 5.3 33 65-100 1-33 (80)
286 PF14253 AbiH: Bacteriophage a 40.1 16 0.00036 29.4 1.4 17 63-79 234-250 (270)
287 PRK06731 flhF flagellar biosyn 39.6 1.7E+02 0.0037 23.8 7.0 65 19-95 153-219 (270)
288 PF12242 Eno-Rase_NADH_b: NAD( 39.5 85 0.0018 19.9 4.0 24 62-85 38-61 (78)
289 cd07218 Pat_iPLA2 Calcium-inde 39.4 45 0.00099 26.6 3.7 19 67-85 33-51 (245)
290 PF08484 Methyltransf_14: C-me 39.2 53 0.0012 24.2 3.8 45 53-97 56-102 (160)
291 COG0331 FabD (acyl-carrier-pro 38.3 40 0.00086 28.0 3.3 22 62-83 83-104 (310)
292 PRK04148 hypothetical protein; 37.5 60 0.0013 23.1 3.7 45 49-97 3-47 (134)
293 PF15566 Imm18: Immunity prote 37.1 47 0.001 19.1 2.4 31 47-77 4-34 (52)
294 cd07211 Pat_PNPLA8 Patatin-lik 37.0 44 0.00095 27.7 3.4 52 18-83 5-60 (308)
295 PF03681 UPF0150: Uncharacteri 37.0 50 0.0011 18.3 2.7 34 18-60 11-44 (48)
296 cd07221 Pat_PNPLA3 Patatin-lik 35.9 55 0.0012 26.2 3.7 22 65-86 33-54 (252)
297 PLN03093 Protein SENSITIVITY T 35.9 91 0.002 25.2 4.7 74 4-78 138-212 (273)
298 PF10605 3HBOH: 3HB-oligomer h 35.6 2.4E+02 0.0052 26.0 7.6 35 66-100 287-322 (690)
299 COG3621 Patatin [General funct 35.5 92 0.002 26.1 4.8 55 16-85 4-63 (394)
300 COG1087 GalE UDP-glucose 4-epi 34.8 1.4E+02 0.003 24.8 5.6 89 9-99 13-120 (329)
301 cd07220 Pat_PNPLA2 Patatin-lik 34.7 56 0.0012 26.2 3.6 20 66-85 38-57 (249)
302 cd00382 beta_CA Carbonic anhyd 34.4 53 0.0012 22.7 3.0 31 49-79 44-74 (119)
303 PF06500 DUF1100: Alpha/beta h 33.9 62 0.0014 28.0 3.8 63 187-249 189-257 (411)
304 PRK13512 coenzyme A disulfide 33.7 1.8E+02 0.0039 25.5 6.9 43 53-98 138-180 (438)
305 TIGR02069 cyanophycinase cyano 33.3 2.1E+02 0.0046 22.9 6.6 54 191-249 2-57 (250)
306 PF01012 ETF: Electron transfe 33.3 1.9E+02 0.0042 21.1 6.3 57 17-85 54-113 (164)
307 PRK14194 bifunctional 5,10-met 33.2 87 0.0019 25.9 4.4 34 51-84 143-182 (301)
308 TIGR00246 tRNA_RlmH_YbeA rRNA 32.9 1.1E+02 0.0024 22.4 4.5 61 21-100 66-126 (153)
309 PRK10867 signal recognition pa 32.6 3.1E+02 0.0066 24.2 7.9 65 18-94 181-247 (433)
310 TIGR03607 patatin-related prot 32.4 87 0.0019 29.6 4.8 36 48-83 47-85 (739)
311 COG3887 Predicted signaling pr 32.4 1.3E+02 0.0029 27.4 5.6 51 47-100 323-379 (655)
312 PRK10416 signal recognition pa 31.8 2.6E+02 0.0057 23.4 7.2 73 15-96 191-268 (318)
313 PF03490 Varsurf_PPLC: Variant 31.6 71 0.0015 18.1 2.5 27 44-70 5-31 (51)
314 KOG0781 Signal recognition par 30.7 1.7E+02 0.0037 26.1 5.8 57 17-85 463-519 (587)
315 PLN02752 [acyl-carrier protein 30.4 57 0.0012 27.5 3.1 17 67-83 127-143 (343)
316 TIGR02813 omega_3_PfaA polyket 30.1 57 0.0012 35.8 3.6 29 54-82 664-692 (2582)
317 cd03379 beta_CA_cladeD Carboni 29.8 80 0.0017 22.7 3.4 30 49-78 41-70 (142)
318 KOG4231 Intracellular membrane 29.5 71 0.0015 28.4 3.4 53 18-85 414-471 (763)
319 cd01715 ETF_alpha The electron 29.1 1.8E+02 0.0038 21.5 5.3 41 44-85 65-106 (168)
320 KOG2316 Predicted ATPase (PP-l 28.5 89 0.0019 24.4 3.5 66 13-80 55-120 (277)
321 COG0218 Predicted GTPase [Gene 28.0 97 0.0021 23.8 3.6 17 185-201 133-149 (200)
322 PF01734 Patatin: Patatin-like 27.8 65 0.0014 23.8 2.9 21 64-84 27-47 (204)
323 cd07217 Pat17_PNPLA8_PNPLA9_li 27.6 54 0.0012 27.7 2.5 18 67-84 44-61 (344)
324 cd01985 ETF The electron trans 27.5 2.2E+02 0.0047 21.2 5.6 41 44-85 73-114 (181)
325 PF05577 Peptidase_S28: Serine 27.4 76 0.0016 27.8 3.5 40 188-230 377-416 (434)
326 cd07213 Pat17_PNPLA8_PNPLA9_li 27.0 57 0.0012 26.7 2.5 19 67-85 37-55 (288)
327 COG2230 Cfa Cyclopropane fatty 26.6 1.5E+02 0.0032 24.4 4.6 50 46-96 52-105 (283)
328 PF00484 Pro_CA: Carbonic anhy 26.6 1.7E+02 0.0037 21.1 4.7 35 47-81 38-72 (153)
329 COG4075 Uncharacterized conser 26.4 1.1E+02 0.0025 20.2 3.2 42 23-71 31-72 (110)
330 PF02882 THF_DHG_CYH_C: Tetrah 26.1 1.8E+02 0.0038 21.5 4.7 38 47-84 16-59 (160)
331 PRK03363 fixB putative electro 25.9 3.6E+02 0.0078 22.6 6.8 41 45-85 62-103 (313)
332 cd00883 beta_CA_cladeA Carboni 25.9 1E+02 0.0023 23.2 3.6 32 50-81 67-98 (182)
333 COG4667 Predicted esterase of 25.7 73 0.0016 25.7 2.7 42 52-94 28-70 (292)
334 cd03131 GATase1_HTS Type 1 glu 25.6 36 0.00079 25.5 1.0 36 48-83 81-116 (175)
335 PF10913 DUF2706: Protein of u 25.4 1.1E+02 0.0025 17.4 2.7 31 267-297 26-59 (60)
336 cd01853 Toc34_like Toc34-like 25.3 1.2E+02 0.0026 24.3 3.9 16 19-34 77-92 (249)
337 COG2939 Carboxypeptidase C (ca 25.1 1.2E+02 0.0026 27.0 4.1 30 217-247 462-491 (498)
338 KOG2214 Predicted esterase of 24.7 84 0.0018 27.9 3.1 32 62-93 200-231 (543)
339 COG0288 CynT Carbonic anhydras 24.0 89 0.0019 24.2 2.9 35 48-82 76-110 (207)
340 PF00862 Sucrose_synth: Sucros 23.9 1.6E+02 0.0034 26.5 4.6 40 46-85 382-423 (550)
341 PLN03006 carbonate dehydratase 23.8 1.1E+02 0.0025 25.2 3.6 30 50-79 158-187 (301)
342 PRK00771 signal recognition pa 23.7 3.7E+02 0.0081 23.7 6.9 64 19-94 174-239 (437)
343 cd07219 Pat_PNPLA1 Patatin-lik 23.3 1.2E+02 0.0027 26.0 3.8 18 67-84 47-64 (382)
344 cd01528 RHOD_2 Member of the R 23.3 2.2E+02 0.0048 18.5 5.7 21 12-32 6-27 (101)
345 PF09419 PGP_phosphatase: Mito 23.2 3.2E+02 0.007 20.4 6.1 53 16-74 36-88 (168)
346 PLN02925 4-hydroxy-3-methylbut 23.0 1.3E+02 0.0028 28.2 4.0 43 20-71 629-671 (733)
347 PRK15219 carbonic anhydrase; P 23.0 67 0.0014 25.7 2.1 33 49-81 128-160 (245)
348 KOG4389 Acetylcholinesterase/B 22.9 1.2E+02 0.0025 27.1 3.6 52 49-100 201-256 (601)
349 PF06289 FlbD: Flagellar prote 22.6 1.7E+02 0.0036 17.5 3.2 31 217-247 28-58 (60)
350 COG3673 Uncharacterized conser 22.6 2.4E+02 0.0052 23.7 5.0 74 19-96 63-150 (423)
351 cd07216 Pat17_PNPLA8_PNPLA9_li 22.5 60 0.0013 26.9 1.9 17 67-83 45-61 (309)
352 PF07643 DUF1598: Protein of u 22.3 2.3E+02 0.0049 18.3 4.1 31 53-83 32-62 (84)
353 PF00857 Isochorismatase: Isoc 22.3 3E+02 0.0065 20.1 5.5 51 51-101 100-150 (174)
354 PF11009 DUF2847: Protein of u 22.0 2.7E+02 0.0058 18.9 4.8 35 51-85 7-41 (105)
355 PRK12726 flagellar biosynthesi 21.9 5.4E+02 0.012 22.5 7.3 65 19-95 284-350 (407)
356 cd01014 nicotinamidase_related 21.7 2.4E+02 0.0052 20.4 4.8 48 52-99 88-135 (155)
357 cd00884 beta_CA_cladeB Carboni 21.5 1.5E+02 0.0032 22.6 3.6 32 50-81 73-104 (190)
358 PF06833 MdcE: Malonate decarb 21.5 1.4E+02 0.0031 23.6 3.6 59 20-83 65-128 (234)
359 PF02353 CMAS: Mycolic acid cy 21.2 1.4E+02 0.003 24.4 3.6 49 45-94 41-93 (273)
360 PRK13938 phosphoheptose isomer 20.8 2.7E+02 0.0059 21.3 5.0 24 63-86 45-68 (196)
361 PLN00022 electron transfer fla 20.6 4E+02 0.0088 22.8 6.3 41 44-85 99-140 (356)
362 PRK05368 homoserine O-succinyl 20.4 1.3E+02 0.0028 25.0 3.3 32 51-82 121-152 (302)
363 cd07199 Pat17_PNPLA8_PNPLA9_li 20.3 1.8E+02 0.004 23.2 4.2 18 67-84 37-54 (258)
364 PF10561 UPF0565: Uncharacteri 20.2 1.6E+02 0.0035 24.4 3.8 21 65-85 194-214 (303)
365 PRK03031 rnpA ribonuclease P; 20.1 3E+02 0.0065 19.1 4.7 38 15-63 80-117 (122)
No 1
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=100.00 E-value=1.1e-33 Score=215.55 Aligned_cols=261 Identities=41% Similarity=0.708 Sum_probs=234.5
Q ss_pred CCcccccccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHH
Q 044899 1 SFCFQGLFFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTL 80 (299)
Q Consensus 1 ~~c~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~ 80 (299)
.|||+++|+++.+.+++.+ |.|+.+|.|||-......+.+....|+++++++|..++++++++.++-+|...||.|..+
T Consensus 60 ~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~r 138 (326)
T KOG2931|consen 60 KSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILAR 138 (326)
T ss_pred HhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHH
Confidence 4899999999998888776 999999999998777666666667899999999999999999999999999999999999
Q ss_pred HHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhc
Q 044899 81 FAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQ 160 (299)
Q Consensus 81 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (299)
+|..||++|.|+||+++.+..++|.+|...+....++...++...+.+.++.+.|+++.... +.++++.+++.+..
T Consensus 139 FAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~----~~diVq~Yr~~l~~ 214 (326)
T KOG2931|consen 139 FALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLYYYGMTQGVKDYLLAHHFGKEELGN----NSDIVQEYRQHLGE 214 (326)
T ss_pred HHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHHhhchhhhHHHHHHHHHhccccccc----cHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998766 78999999998877
Q ss_pred c-cchhHHHHHHHHhhccchhhhhcc----CCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHh
Q 044899 161 G-QSLNVMHFLQAINERHDLTKGLKE----LQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLA 235 (299)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~~~~~l~~----i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 235 (299)
. .+.+...++.++..|.|+...... ++||+|++.|+..+.++.+.++...+...+..+..+.++|-.+..++|..
T Consensus 215 ~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~k 294 (326)
T KOG2931|consen 215 RLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVSAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGK 294 (326)
T ss_pred cCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhhhhhhhhcccCcccceEEEEcccCCcccccCchH
Confidence 6 558999999999999998765554 45999999999999998889999999888899999999999999999999
Q ss_pred HHHHHHHHHhhcCCccCCCCCCCCCCCCCCCCCCCCC
Q 044899 236 MLIPIELFLMGFGYCKQPNFPSSSSNGPNPTSPLNHS 272 (299)
Q Consensus 236 ~~~~i~~fl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (299)
+++.+.-||++.++.++..... .+++++++.
T Consensus 295 l~ea~~~FlqG~Gy~~s~~~~~------~~Rsr~~s~ 325 (326)
T KOG2931|consen 295 LAEAFKYFLQGMGYLPSASMTR------LPRSRTSST 325 (326)
T ss_pred HHHHHHHHHccCCccccccccc------CcccccCCC
Confidence 9999999999999988765554 455555443
No 2
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=100.00 E-value=3.4e-32 Score=211.03 Aligned_cols=245 Identities=44% Similarity=0.758 Sum_probs=189.1
Q ss_pred CcccccccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 2 FCFQGLFFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 2 ~c~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
|||+++|+++ .+..+.++|.|+-+|.|||.......+.+....|++++++++..++++++++.++-+|-..||.|..++
T Consensus 38 scF~~ff~~~-~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rf 116 (283)
T PF03096_consen 38 SCFQGFFNFE-DMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARF 116 (283)
T ss_dssp HHCHHHHCSH-HHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHH
T ss_pred HHHHHHhcch-hHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhc
Confidence 7999999995 566778899999999999998777767666678999999999999999999999999999999999999
Q ss_pred HHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcc
Q 044899 82 AMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQG 161 (299)
Q Consensus 82 a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
|.+||++|.|+||+++.+...+|.+|...+...+.+...++...+.+.++.++|+...... +.++++.+++.+...
T Consensus 117 Al~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~----n~Dlv~~yr~~l~~~ 192 (283)
T PF03096_consen 117 ALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHYFGKEEEEN----NSDLVQTYRQHLDER 192 (283)
T ss_dssp HHHSGGGEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHHS-HHHHHC----T-HHHHHHHHHHHT-
T ss_pred cccCccceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcccccccccc----cHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999988999999999999999999999987755 678999999988764
Q ss_pred -cchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHH
Q 044899 162 -QSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPI 240 (299)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 240 (299)
.+.+...+++++..|.|+...++...||+|++.|+..+..+.+.++..++...+.++..++++|=++..|+|+.+++.+
T Consensus 193 ~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~ 272 (283)
T PF03096_consen 193 INPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAF 272 (283)
T ss_dssp TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHH
Confidence 5689999999999999999999999999999999999999888999999988889999999999999999999999999
Q ss_pred HHHHhhcCCcc
Q 044899 241 ELFLMGFGYCK 251 (299)
Q Consensus 241 ~~fl~~~~~~~ 251 (299)
+-||+++|+.+
T Consensus 273 ~lFlQG~G~~~ 283 (283)
T PF03096_consen 273 KLFLQGMGYLP 283 (283)
T ss_dssp HHHHHHTTB--
T ss_pred HHHHccCCcCC
Confidence 99999998753
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.98 E-value=1.4e-30 Score=213.15 Aligned_cols=233 Identities=17% Similarity=0.177 Sum_probs=144.6
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSD---FPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~---~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.|..+.+.|++.|+|+++|+||||.|..+.+.. ...++++++++++.+++++++.++++|+||||||++++.+|.++
T Consensus 44 ~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~ 123 (294)
T PLN02824 44 HWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDA 123 (294)
T ss_pred HHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhC
Confidence 455677788889999999999999997542210 23589999999999999999999999999999999999999999
Q ss_pred hhhhcceEEeccCCCCCch--hHHHHH---HHHHHHHHhhcc-hhHHH----HHHHhhhhhhcccCCCCCCchHHHHHHH
Q 044899 86 QERVLGLILVSPICKAPSW--TEWLYN---KVLMNLLYFYGM-CGVLK----ECLLQRYFSKEFRSGEHGAESDIIQACR 155 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (299)
|++|+++|++++....... ...... ..+...+..... ..+.. .......+...+... ....++..+.+.
T Consensus 124 p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 202 (294)
T PLN02824 124 PELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDD-SAVTDELVEAIL 202 (294)
T ss_pred hhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccCh-hhccHHHHHHHH
Confidence 9999999999976432100 000000 011111000000 00000 000011111101000 000122222221
Q ss_pred HHHhcccchhHHHHHHHH--hhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCccccc
Q 044899 156 RVLDQGQSLNVMHFLQAI--NERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEE 231 (299)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 231 (299)
... ........+...+ .........+.++++|+|+|+|++|..++ .++.+.+..+ +.++++++++||++++|
T Consensus 203 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~~e 278 (294)
T PLN02824 203 RPG--LEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA--VEDFIVLPGVGHCPQDE 278 (294)
T ss_pred hcc--CCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC--ccceEEeCCCCCChhhh
Confidence 110 1111111111111 11122345688999999999999999884 4444444443 68899999999999999
Q ss_pred ChHhHHHHHHHHHhh
Q 044899 232 YPLAMLIPIELFLMG 246 (299)
Q Consensus 232 ~p~~~~~~i~~fl~~ 246 (299)
+|+++++.|.+|+++
T Consensus 279 ~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 279 APELVNPLIESFVAR 293 (294)
T ss_pred CHHHHHHHHHHHHhc
Confidence 999999999999975
No 4
>PLN02965 Probable pheophorbidase
Probab=99.97 E-value=9.8e-30 Score=203.78 Aligned_cols=221 Identities=12% Similarity=0.135 Sum_probs=140.2
Q ss_pred ccCHhhHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEeeChhHHHHHHHHHhh
Q 044899 8 FFCPDAASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE-KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 8 ~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..|..+.+.| ..+|+|+++|+||||.|+.+. ...++++++++|+.++++.++.+ +++|+||||||.+++.++.++
T Consensus 17 ~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~ 93 (255)
T PLN02965 17 WCWYKLATLLDAAGFKSTCVDLTGAGISLTDS---NTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKF 93 (255)
T ss_pred CcHHHHHHHHhhCCceEEEecCCcCCCCCCCc---cccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhC
Confidence 3455666777 679999999999999996432 23578999999999999999874 999999999999999999999
Q ss_pred hhhhcceEEeccCCCCCch--hHHHHHHHHHH---HHHh---hcchhH-----HHHHHHhhhhhhcccCCCCCCchHHHH
Q 044899 86 QERVLGLILVSPICKAPSW--TEWLYNKVLMN---LLYF---YGMCGV-----LKECLLQRYFSKEFRSGEHGAESDIIQ 152 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~---~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
|++|+++|++++....+.. .... ...... .... ...... ........++... . ..+...
T Consensus 94 p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~ 165 (255)
T PLN02965 94 TDKISMAIYVAAAMVKPGSIISPRL-KNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ---S----PLEDYT 165 (255)
T ss_pred chheeEEEEEccccCCCCCCccHHH-HhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcC---C----CHHHHH
Confidence 9999999999986432211 1100 000000 0000 000000 0000000000000 0 011011
Q ss_pred HHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccc
Q 044899 153 ACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTE 230 (299)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 230 (299)
.....+........ ... .++...+..+++|+++|+|++|..++ ..+.+.+.++ ++++++++++||++++
T Consensus 166 ~~~~~~~~~~~~~~----~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~--~a~~~~i~~~GH~~~~ 236 (255)
T PLN02965 166 LSSKLLRPAPVRAF----QDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWP--PAQTYVLEDSDHSAFF 236 (255)
T ss_pred HHHHhcCCCCCcch----hhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCC--cceEEEecCCCCchhh
Confidence 11111111000000 000 11223455789999999999999983 5567777777 7899999999999999
Q ss_pred cChHhHHHHHHHHHhhcC
Q 044899 231 EYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 231 e~p~~~~~~i~~fl~~~~ 248 (299)
|+|++|++.|.+|++.+.
T Consensus 237 e~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 237 SVPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred cCHHHHHHHHHHHHHHhc
Confidence 999999999999998763
No 5
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=2.7e-29 Score=210.19 Aligned_cols=231 Identities=15% Similarity=0.243 Sum_probs=143.9
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHh-hhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMK-YQE 87 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~-~p~ 87 (299)
.|..+...|.++|+|+++|+||||.|+.+. ...++++++++++.+++++++.++++|+||||||.+++.++.. +|+
T Consensus 103 ~w~~~~~~L~~~~~via~Dl~G~G~S~~~~---~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~ 179 (360)
T PLN02679 103 HWRRNIGVLAKNYTVYAIDLLGFGASDKPP---GFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRD 179 (360)
T ss_pred HHHHHHHHHhcCCEEEEECCCCCCCCCCCC---CccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChh
Confidence 455567778889999999999999997532 2358999999999999999999999999999999999998874 799
Q ss_pred hhcceEEeccCCCCCch---hHHHHHHH-----HHHHH-Hhhcch-hHHH----HHHHhhhhhhcccCCCCCCchHHHHH
Q 044899 88 RVLGLILVSPICKAPSW---TEWLYNKV-----LMNLL-YFYGMC-GVLK----ECLLQRYFSKEFRSGEHGAESDIIQA 153 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~---~~~~~~~~-----~~~~~-~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (299)
+|+++|++++....... ..+..... ....+ ...... .... ...+..++...+... ....++..+.
T Consensus 180 rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 258 (360)
T PLN02679 180 LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNK-EAVDDELVEI 258 (360)
T ss_pred hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCc-ccCCHHHHHH
Confidence 99999999986432110 01100000 00000 000000 0000 001111111111100 0012233332
Q ss_pred HHHHHhcccchhHHHHHHHHh--hccchhhhhccCCcceEEEecCCCCCCchh-------HHHHHhhCCCceeEEEEcCC
Q 044899 154 CRRVLDQGQSLNVMHFLQAIN--ERHDLTKGLKELQCKTLIFVGESSPFHTES-------LHMSATMGSKNCGLVEVQAC 224 (299)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 224 (299)
+....... .....+...+. ...+....+.++++|+|+|+|++|.+++.. ..+.+.++ ++++++++++
T Consensus 259 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip--~~~l~~i~~a 334 (360)
T PLN02679 259 IRGPADDE--GALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLP--NVTLYVLEGV 334 (360)
T ss_pred HHhhccCC--ChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCC--ceEEEEcCCC
Confidence 22211111 11111111111 123445678899999999999999988422 12333344 7899999999
Q ss_pred CCcccccChHhHHHHHHHHHhhc
Q 044899 225 GSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 225 gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
||++++|+|+++++.|.+||++.
T Consensus 335 GH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 335 GHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCCccccCHHHHHHHHHHHHHhc
Confidence 99999999999999999999875
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.97 E-value=1.3e-29 Score=205.57 Aligned_cols=224 Identities=19% Similarity=0.152 Sum_probs=144.8
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+.+.|.++|+|+++|+||||.|+.+ ...++++++++++.+++++++.++++|+||||||.+++.+|.++|++|
T Consensus 41 w~~~~~~L~~~~~vi~~Dl~G~G~S~~~----~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v 116 (276)
T TIGR02240 41 VFPFIEALDPDLEVIAFDVPGVGGSSTP----RHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERC 116 (276)
T ss_pred HHHHHHHhccCceEEEECCCCCCCCCCC----CCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHh
Confidence 4456677888999999999999999743 235799999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHH-HHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHH
Q 044899 90 LGLILVSPICKAPSWTEWLY-NKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMH 168 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
+++|++++............ .............. .. ......++...... .++...................
T Consensus 117 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 189 (276)
T TIGR02240 117 KKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPS-HG-IHIAPDIYGGAFRR-----DPELAMAHASKVRSGGKLGYYW 189 (276)
T ss_pred hheEEeccCCccccCCCchhHHHHhcCchhhhccc-cc-cchhhhhccceeec-----cchhhhhhhhhcccCCCchHHH
Confidence 99999998764321110000 00000000000000 00 00011111111100 1222222222211111111111
Q ss_pred HHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhh
Q 044899 169 FLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 169 ~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
..... ...+..+.++++++|+|+|+|++|.+++ ..+++.+.++ ++++++++ +||++++|+|+++++.|.+|+++
T Consensus 190 ~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~--~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 190 QLFAG-LGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP--NAELHIID-DGHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred HHHHH-cCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC--CCEEEEEc-CCCchhhccHHHHHHHHHHHHHH
Confidence 11111 1123345678999999999999999984 4566777777 68899997 59999999999999999999987
Q ss_pred cC
Q 044899 247 FG 248 (299)
Q Consensus 247 ~~ 248 (299)
..
T Consensus 266 ~~ 267 (276)
T TIGR02240 266 ER 267 (276)
T ss_pred hh
Confidence 53
No 7
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=2.5e-29 Score=196.92 Aligned_cols=239 Identities=16% Similarity=0.172 Sum_probs=158.8
Q ss_pred ccccCHhhHhhhhc-CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHh
Q 044899 6 GLFFCPDAASLLLH-NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 6 ~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.++.|......|+. ||+|+|+|+||+|.|+.+.. ...|++..++.|+..++++++.++++++||+|||++|+.+|..
T Consensus 56 ~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~--~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~ 133 (322)
T KOG4178|consen 56 SWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPH--ISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALF 133 (322)
T ss_pred cchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCC--cceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHh
Confidence 45666666666665 69999999999999998643 4579999999999999999999999999999999999999999
Q ss_pred hhhhhcceEEeccCCCCCchhHHHHH------HHHHHHHHhhcchh-----HHHHHHHhhhhhhccc----CC------C
Q 044899 85 YQERVLGLILVSPICKAPSWTEWLYN------KVLMNLLYFYGMCG-----VLKECLLQRYFSKEFR----SG------E 143 (299)
Q Consensus 85 ~p~~v~~lvl~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~----~~------~ 143 (299)
+|++|+++|+++.....+........ ....-.....+..+ ...+.+...++..... .. +
T Consensus 134 ~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (322)
T KOG4178|consen 134 YPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENP 213 (322)
T ss_pred ChhhcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCcc
Confidence 99999999999976652211110000 00000000000000 0001111111111110 00 0
Q ss_pred CCCchHHHHHHHHHHhcccchhHHHHHHHHhhcc-chhhhhccCCcceEEEecCCCCCCch---hHHHHHhhCCCceeEE
Q 044899 144 HGAESDIIQACRRVLDQGQSLNVMHFLQAINERH-DLTKGLKELQCKTLIFVGESSPFHTE---SLHMSATMGSKNCGLV 219 (299)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~Pvl~i~G~~D~~~~~---~~~~~~~~~~~~~~~~ 219 (299)
.....+.++.+...+......+...+++.+.... .....+.++++|+++|+|+.|.+.+. ...+.+.++. ..+.+
T Consensus 214 ~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~-l~~~v 292 (322)
T KOG4178|consen 214 LWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPR-LTERV 292 (322)
T ss_pred chhhHHHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHhhcc-ccceE
Confidence 1113445555555554444555666666664433 23456778999999999999998832 3334444442 34788
Q ss_pred EEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 220 EVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 220 ~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
+++++||+++.|+|+++++.|.+|+++.
T Consensus 293 v~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 293 VIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EecCCcccccccCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999875
No 8
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.97 E-value=5.1e-29 Score=204.01 Aligned_cols=232 Identities=14% Similarity=0.147 Sum_probs=145.3
Q ss_pred ccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh
Q 044899 8 FFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 8 ~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
..|..+.+.|.+.|+|+++|+||||.|+.+ ...++++++++|+.+++++++.++++++||||||.+|+.++.++|+
T Consensus 41 ~~w~~~~~~L~~~~~via~D~~G~G~S~~~----~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 116 (295)
T PRK03592 41 YLWRNIIPHLAGLGRCLAPDLIGMGASDKP----DIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPD 116 (295)
T ss_pred HHHHHHHHHHhhCCEEEEEcCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChh
Confidence 345667778888889999999999999754 2248999999999999999999999999999999999999999999
Q ss_pred hhcceEEeccCCCCCchhHHHH-HHHHHHHHHhhcchh-HH--HHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcc-c
Q 044899 88 RVLGLILVSPICKAPSWTEWLY-NKVLMNLLYFYGMCG-VL--KECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQG-Q 162 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 162 (299)
+|+++|++++......+..... .......+....... .. ........+....... ..++....+...+... .
T Consensus 117 ~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 193 (295)
T PRK03592 117 RVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRP---LSDEEMAVYRRPFPTPES 193 (295)
T ss_pred heeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCccccc---CCHHHHHHHHhhcCCchh
Confidence 9999999998543222111000 000011111100000 00 0001111111111000 0222222222211111 0
Q ss_pred chhHHHHHHHHh----------hccchhhhhccCCcceEEEecCCCCCC-c-hhHHHHH-hhCCCceeEEEEcCCCCccc
Q 044899 163 SLNVMHFLQAIN----------ERHDLTKGLKELQCKTLIFVGESSPFH-T-ESLHMSA-TMGSKNCGLVEVQACGSLVT 229 (299)
Q Consensus 163 ~~~~~~~~~~~~----------~~~~~~~~l~~i~~Pvl~i~G~~D~~~-~-~~~~~~~-~~~~~~~~~~~~~~~gH~~~ 229 (299)
......+.+.+. ...++...+.++++|+|+|+|++|.++ + ...+... ..+ ++++++++++||+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~--~~~~~~i~~~gH~~~ 271 (295)
T PRK03592 194 RRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWPN--QLEITVFGAGLHFAQ 271 (295)
T ss_pred hhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhhh--hcceeeccCcchhhh
Confidence 011111111100 011234557889999999999999988 4 3334333 344 689999999999999
Q ss_pred ccChHhHHHHHHHHHhhcC
Q 044899 230 EEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 230 ~e~p~~~~~~i~~fl~~~~ 248 (299)
+|+|+++++.|.+|+++..
T Consensus 272 ~e~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 272 EDSPEEIGAAIAAWLRRLR 290 (295)
T ss_pred hcCHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 9
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.97 E-value=2.7e-28 Score=194.19 Aligned_cols=221 Identities=16% Similarity=0.128 Sum_probs=139.3
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.|..+.+.+ ++|+|+++|+||||.|..+. ..+++++++++.+++++++.++++++||||||.+++.+|.++|+.
T Consensus 17 ~w~~~~~~l-~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~ 90 (242)
T PRK11126 17 DWQPVGEAL-PDYPRLYIDLPGHGGSAAIS-----VDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAG 90 (242)
T ss_pred HHHHHHHHc-CCCCEEEecCCCCCCCCCcc-----ccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcc
Confidence 455566777 48999999999999997532 248999999999999999999999999999999999999999664
Q ss_pred -hcceEEeccCCCCCchhHHHHHHHH-HHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhH
Q 044899 89 -VLGLILVSPICKAPSWTEWLYNKVL-MNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNV 166 (299)
Q Consensus 89 -v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (299)
|+++|++++.+.............. ........ .... ......++........ ..+....+............
T Consensus 91 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 165 (242)
T PRK11126 91 GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFR-QEPL-EQVLADWYQQPVFASL---NAEQRQQLVAKRSNNNGAAV 165 (242)
T ss_pred cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhc-cCcH-HHHHHHHHhcchhhcc---CccHHHHHHHhcccCCHHHH
Confidence 9999999876543322211100000 00000000 0000 1111112111111000 11111111111111111122
Q ss_pred HHHHHHH--hhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHH
Q 044899 167 MHFLQAI--NERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 167 ~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
...+... ....+..+.+.+++||+++|+|++|..+. .+.+. . ++++++++++||++++|+|+++++.|.+|+
T Consensus 166 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~---~~~~~-~--~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 166 AAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ---ALAQQ-L--ALPLHVIPNAGHNAHRENPAAFAASLAQIL 239 (242)
T ss_pred HHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH---HHHHH-h--cCeEEEeCCCCCchhhhChHHHHHHHHHHH
Confidence 2222221 12345667888999999999999998652 22332 2 689999999999999999999999999999
Q ss_pred hh
Q 044899 245 MG 246 (299)
Q Consensus 245 ~~ 246 (299)
+.
T Consensus 240 ~~ 241 (242)
T PRK11126 240 RL 241 (242)
T ss_pred hh
Confidence 75
No 10
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=8.1e-29 Score=203.41 Aligned_cols=225 Identities=9% Similarity=-0.003 Sum_probs=137.9
Q ss_pred CHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 10 CPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 10 ~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
|..++..|. .||+|+++|+||||.|+.+. ....++++++++++.+++++++.++++|+||||||.+++.+|.++|++
T Consensus 62 w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~--~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~ 139 (302)
T PRK00870 62 YRKMIPILAAAGHRVIAPDLIGFGRSDKPT--RREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDR 139 (302)
T ss_pred HHHHHHHHHhCCCEEEEECCCCCCCCCCCC--CcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhh
Confidence 445666676 58999999999999996532 123589999999999999999999999999999999999999999999
Q ss_pred hcceEEeccCCCCCch--hHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhH
Q 044899 89 VLGLILVSPICKAPSW--TEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNV 166 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (299)
|+++|++++....... .... . ...... ..... .....++....... ...+....+............
T Consensus 140 v~~lvl~~~~~~~~~~~~~~~~-~-~~~~~~--~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 208 (302)
T PRK00870 140 FARLVVANTGLPTGDGPMPDAF-W-AWRAFS--QYSPV----LPVGRLVNGGTVRD---LSDAVRAAYDAPFPDESYKAG 208 (302)
T ss_pred eeEEEEeCCCCCCccccchHHH-h-hhhccc--ccCch----hhHHHHhhcccccc---CCHHHHHHhhcccCChhhhcc
Confidence 9999999975322110 0000 0 000000 00000 00000000000000 011111111100000000000
Q ss_pred HHHHHH----------HhhccchhhhhccCCcceEEEecCCCCCCc-hhHHHHHhhCCC-ceeEEEEcCCCCcccccChH
Q 044899 167 MHFLQA----------INERHDLTKGLKELQCKTLIFVGESSPFHT-ESLHMSATMGSK-NCGLVEVQACGSLVTEEYPL 234 (299)
Q Consensus 167 ~~~~~~----------~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~p~ 234 (299)
...... .....+.+..+.++++|+++|+|++|.+++ ....+.+.++.. +..+++++++||++++|+|+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~ 288 (302)
T PRK00870 209 ARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGDAILQKRIPGAAGQPHPTIKGAGHFLQEDSGE 288 (302)
T ss_pred hhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCchHHHHhhcccccccceeeecCCCccchhhChH
Confidence 000000 000112235578899999999999999984 335566666621 12388999999999999999
Q ss_pred hHHHHHHHHHhhc
Q 044899 235 AMLIPIELFLMGF 247 (299)
Q Consensus 235 ~~~~~i~~fl~~~ 247 (299)
++++.|.+|+++.
T Consensus 289 ~~~~~l~~fl~~~ 301 (302)
T PRK00870 289 ELAEAVLEFIRAT 301 (302)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999764
No 11
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.96 E-value=5.2e-28 Score=193.13 Aligned_cols=221 Identities=21% Similarity=0.330 Sum_probs=149.6
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+.+.+.++|+|+++|+||||.|..+ ...++++++++++.++++.++.++++++||||||++++.+|.++|++|
T Consensus 29 ~~~~~~~l~~~~~v~~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v 104 (251)
T TIGR02427 29 WDPVLPALTPDFRVLRYDKRGHGLSDAP----EGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRV 104 (251)
T ss_pred HHHHHHHhhcccEEEEecCCCCCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHh
Confidence 4456677888999999999999998542 335799999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHF 169 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (299)
+++|++++.........+... ... ....+..... ......++...+... .......+...+.......+...
T Consensus 105 ~~li~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 176 (251)
T TIGR02427 105 RALVLSNTAAKIGTPESWNAR--IAA-VRAEGLAALA-DAVLERWFTPGFREA----HPARLDLYRNMLVRQPPDGYAGC 176 (251)
T ss_pred HHHhhccCccccCchhhHHHH--Hhh-hhhccHHHHH-HHHHHHHcccccccC----ChHHHHHHHHHHHhcCHHHHHHH
Confidence 999999876543222221110 000 0001111111 112222222221111 22223333333333332333332
Q ss_pred HHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 170 LQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 170 ~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
...+ ...+....+.++++|+++++|++|..++ ....+.+.++ +.++++++++||+.++++|+++++.|.+|++
T Consensus 177 ~~~~-~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 177 CAAI-RDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVP--GARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred HHHH-hcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCC--CceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 2222 3345566788899999999999999984 3455666565 6889999999999999999999999999974
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.96 E-value=3.1e-28 Score=195.45 Aligned_cols=222 Identities=15% Similarity=0.104 Sum_probs=138.1
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.|..+.+.|.++|+|+++|+||||.|... ..++++++++++.+ ++.++++++||||||.+++.+|.++|++
T Consensus 28 ~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~-----~~~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 98 (256)
T PRK10349 28 VWRCIDEELSSHFTLHLVDLPGFGRSRGF-----GALSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPER 98 (256)
T ss_pred HHHHHHHHHhcCCEEEEecCCCCCCCCCC-----CCCCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHh
Confidence 45567778888999999999999999642 24688887777653 5678999999999999999999999999
Q ss_pred hcceEEeccCCCCCchhH--HHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc-ch-
Q 044899 89 VLGLILVSPICKAPSWTE--WLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ-SL- 164 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 164 (299)
|+++|++++.+....... ............. +.... ......++........ ........+...+.... ..
T Consensus 99 v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 173 (256)
T PRK10349 99 VQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ--LSDDF-QRTVERFLALQTMGTE--TARQDARALKKTVLALPMPEV 173 (256)
T ss_pred hheEEEecCccceecCCCCCcccHHHHHHHHHH--HHhch-HHHHHHHHHHHHccCc--hHHHHHHHHHHHhhccCCCcH
Confidence 999999988543211000 0000000000000 00000 0111111111100000 00111112222221111 11
Q ss_pred hHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHH
Q 044899 165 NVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIEL 242 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 242 (299)
.............+....+.++++|+|+|+|++|.+++ ....+.+.++ ++++++++++||++++|+|++|++.+.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~--~~~~~~i~~~gH~~~~e~p~~f~~~l~~ 251 (256)
T PRK10349 174 DVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWP--HSESYIFAKAAHAPFISHPAEFCHLLVA 251 (256)
T ss_pred HHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHHHHHHHHH
Confidence 11111111223456778899999999999999999883 4455666666 7999999999999999999999999999
Q ss_pred HHhh
Q 044899 243 FLMG 246 (299)
Q Consensus 243 fl~~ 246 (299)
|-++
T Consensus 252 ~~~~ 255 (256)
T PRK10349 252 LKQR 255 (256)
T ss_pred Hhcc
Confidence 8653
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.96 E-value=6e-28 Score=193.76 Aligned_cols=219 Identities=17% Similarity=0.184 Sum_probs=138.4
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+...+.++|+|+++|+||||.|..+ ..++++++++|+.+++++++.++++|+||||||.+++.+|.++|++|
T Consensus 32 ~~~~~~~l~~~~~vi~~D~~G~G~s~~~-----~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v 106 (255)
T PRK10673 32 LGVLARDLVNDHDIIQVDMRNHGLSPRD-----PVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRI 106 (255)
T ss_pred HHHHHHHHhhCCeEEEECCCCCCCCCCC-----CCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhc
Confidence 4556777888999999999999999642 24799999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHH-HHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc-hhHH
Q 044899 90 LGLILVSPICKAPSWTEW-LYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS-LNVM 167 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 167 (299)
+++|++++.+........ .....+... ...+.... . .....+..... ...........+..... ....
T Consensus 107 ~~lvli~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 176 (255)
T PRK10673 107 DKLVAIDIAPVDYHVRRHDEIFAAINAV-SEAGATTR--Q-QAAAIMRQHLN------EEGVIQFLLKSFVDGEWRFNVP 176 (255)
T ss_pred ceEEEEecCCCCccchhhHHHHHHHHHh-hhcccccH--H-HHHHHHHHhcC------CHHHHHHHHhcCCcceeEeeHH
Confidence 999999865432111000 000000000 00000000 0 00000000000 01111111111111000 0000
Q ss_pred HHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 168 HFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 168 ~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
.....+ ........++++++|+|+|+|++|..+ ...+.+.+.++ ++++++++++||++++++|+++++.|.+||.
T Consensus 177 ~~~~~~-~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~ 253 (255)
T PRK10673 177 VLWDQY-PHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFP--QARAHVIAGAGHWVHAEKPDAVLRAIRRYLN 253 (255)
T ss_pred HHHHhH-HHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCC--CcEEEEeCCCCCeeeccCHHHHHHHHHHHHh
Confidence 000111 011112346678999999999999988 34455666666 7899999999999999999999999999997
Q ss_pred h
Q 044899 246 G 246 (299)
Q Consensus 246 ~ 246 (299)
+
T Consensus 254 ~ 254 (255)
T PRK10673 254 D 254 (255)
T ss_pred c
Confidence 5
No 14
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.96 E-value=3.4e-28 Score=191.08 Aligned_cols=230 Identities=21% Similarity=0.241 Sum_probs=149.2
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceE
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLI 93 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 93 (299)
.+-|++.++|+++|++|+|+|+.+.-..........+++-++++....++++.+|+|||+||+++..||.+||++|+.||
T Consensus 110 f~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLi 189 (365)
T KOG4409|consen 110 FDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLI 189 (365)
T ss_pred hhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEE
Confidence 34566799999999999999998755444555667899999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCch----------hHHHHHHHHHHHHHhh-------cchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHH
Q 044899 94 LVSPICKAPSW----------TEWLYNKVLMNLLYFY-------GMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRR 156 (299)
Q Consensus 94 l~~~~~~~~~~----------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (299)
|++|....... ..|. ..+....... .+..+ ...++.++-...+...+....++..-.+.-
T Consensus 190 LvsP~Gf~~~~~~~~~~~~~~~~w~--~~~~~~~~~~nPl~~LR~~Gp~-Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY 266 (365)
T KOG4409|consen 190 LVSPWGFPEKPDSEPEFTKPPPEWY--KALFLVATNFNPLALLRLMGPL-GPKLVSRLRPDRFRKFPSLIEEDFLHEYIY 266 (365)
T ss_pred EecccccccCCCcchhhcCCChHHH--hhhhhhhhcCCHHHHHHhcccc-chHHHhhhhHHHHHhccccchhHHHHHHHH
Confidence 99997764321 1111 0011000000 00000 112222222222222211112333222222
Q ss_pred HHhcccchhHHHHHHHH----hhccchhhhhccCC--cceEEEecCCCCCC-chhHHHHHhhCCCceeEEEEcCCCCccc
Q 044899 157 VLDQGQSLNVMHFLQAI----NERHDLTKGLKELQ--CKTLIFVGESSPFH-TESLHMSATMGSKNCGLVEVQACGSLVT 229 (299)
Q Consensus 157 ~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~i~--~Pvl~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 229 (299)
......+.+...+-..+ ..+..+.+.+..++ ||+++|+|++|.+- ....++...+....++.+++|++||.++
T Consensus 267 ~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~~~~~~v~~aGHhvy 346 (365)
T KOG4409|consen 267 HCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEYVEIIIVPGAGHHVY 346 (365)
T ss_pred HhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhcccceEEEecCCCceee
Confidence 22222222211111111 12344455566665 99999999999887 4566666655555799999999999999
Q ss_pred ccChHhHHHHHHHHHhh
Q 044899 230 EEYPLAMLIPIELFLMG 246 (299)
Q Consensus 230 ~e~p~~~~~~i~~fl~~ 246 (299)
+++|+.|++.+..+++.
T Consensus 347 lDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 347 LDNPEFFNQIVLEECDK 363 (365)
T ss_pred cCCHHHHHHHHHHHHhc
Confidence 99999999999999875
No 15
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.96 E-value=5.7e-28 Score=196.75 Aligned_cols=221 Identities=21% Similarity=0.231 Sum_probs=137.1
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcce
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGL 92 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 92 (299)
+..++..||+|+++|+||||+|+..... ...+. .+++++.++++.++.++++++||||||++++.+|.++|++|+++
T Consensus 53 ~~~l~~~~~~vi~~D~~G~G~S~~~~~~--~~~~~-~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~l 129 (282)
T TIGR03343 53 IGPFVDAGYRVILKDSPGFNKSDAVVMD--EQRGL-VNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKL 129 (282)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCCcCc--ccccc-hhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceE
Confidence 4455677999999999999999753211 11222 56899999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCchhHHHHHHHHHHHHHh--hcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHH
Q 044899 93 ILVSPICKAPSWTEWLYNKVLMNLLYF--YGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFL 170 (299)
Q Consensus 93 vl~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (299)
|++++...................... ...............+... ....+..+........ .......+.
T Consensus 130 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~ 202 (282)
T TIGR03343 130 ILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQS------LITEELLQGRWENIQR-QPEHLKNFL 202 (282)
T ss_pred EEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcc------cCcHHHHHhHHHHhhc-CHHHHHHHH
Confidence 999975322110000000000000000 0001111111100011110 0012222111111111 011111111
Q ss_pred HHH----hhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHH
Q 044899 171 QAI----NERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 171 ~~~----~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
... ....+....++++++|+|+|+|++|.++ +.+..+.+.++ ++++++++++||+++.|+|+.+++.|.+||
T Consensus 203 ~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~--~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 203 ISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMP--DAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred HhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCC--CCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 110 1123445678899999999999999988 35667777776 799999999999999999999999999998
Q ss_pred h
Q 044899 245 M 245 (299)
Q Consensus 245 ~ 245 (299)
+
T Consensus 281 ~ 281 (282)
T TIGR03343 281 R 281 (282)
T ss_pred h
Confidence 6
No 16
>PRK06489 hypothetical protein; Provisional
Probab=99.96 E-value=1.3e-27 Score=200.49 Aligned_cols=226 Identities=14% Similarity=0.154 Sum_probs=139.6
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHH-HHHhCCCcEE-EEeeChhHHHHHHHHHhhhhhhcc
Q 044899 17 LLHNFCIYHIDASGHELGADEIYS---DFPLLNVDDLAEQVAEV-LDFFGLEKVL-CLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~dl~~~-l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
+.++|+||++|+||||.|+.+... ....|+++++++++.++ ++++++++++ |+||||||++|+.+|.++|++|++
T Consensus 102 ~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 102 DASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred cccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 378999999999999999754211 01248999999998885 4889999985 899999999999999999999999
Q ss_pred eEEeccCCCCCchhHHHHHHHHHHHHHhhc-----c----hhHHHHHH-Hhhhhhh----cccCCCCCCchHH-HHHHHH
Q 044899 92 LILVSPICKAPSWTEWLYNKVLMNLLYFYG-----M----CGVLKECL-LQRYFSK----EFRSGEHGAESDI-IQACRR 156 (299)
Q Consensus 92 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~-~~~~~~~----~~~~~~~~~~~~~-~~~~~~ 156 (299)
+|++++.+.......+.............. . ........ ...++.. .+.... ..... ...+..
T Consensus 182 LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 259 (360)
T PRK06489 182 LMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQA--PTRAAADKLVDE 259 (360)
T ss_pred eeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhc--CChHHHHHHHHH
Confidence 999988643222111111111111111000 0 00000000 0000000 000000 01111 111111
Q ss_pred HHh---cccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchh----HHHHHhhCCCceeEEEEcCC----C
Q 044899 157 VLD---QGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTES----LHMSATMGSKNCGLVEVQAC----G 225 (299)
Q Consensus 157 ~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~----g 225 (299)
.+. ......+...... ....+..+.+.+|++|+|+|+|++|.+++.. +.+.+.++ ++++++++++ |
T Consensus 260 ~~~~~~~~~~~~~~~~~~~-~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip--~a~l~~i~~a~~~~G 336 (360)
T PRK06489 260 RLAAPVTADANDFLYQWDS-SRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVK--HGRLVLIPASPETRG 336 (360)
T ss_pred HHHhhhhcCHHHHHHHHHH-hhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCc--CCeEEEECCCCCCCC
Confidence 111 1112222222222 1345667889999999999999999988422 45677777 7899999986 9
Q ss_pred CcccccChHhHHHHHHHHHhhcC
Q 044899 226 SLVTEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 226 H~~~~e~p~~~~~~i~~fl~~~~ 248 (299)
|+++ |+|+++++.|.+||+++.
T Consensus 337 H~~~-e~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 337 HGTT-GSAKFWKAYLAEFLAQVP 358 (360)
T ss_pred cccc-cCHHHHHHHHHHHHHhcc
Confidence 9997 899999999999998763
No 17
>PRK07581 hypothetical protein; Validated
Probab=99.96 E-value=7.8e-28 Score=200.62 Aligned_cols=226 Identities=17% Similarity=0.166 Sum_probs=138.6
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHH-----HHHHHHH----HHHHhCCCcE-EEEeeChhHHHHHHHHHhhhh
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDD-----LAEQVAE----VLDFFGLEKV-LCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~-----~~~dl~~----~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
.++|+||++|+||||.|..+... ...+++++ +++|+.+ ++++++++++ +||||||||++|+.+|.+||+
T Consensus 69 ~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~ 147 (339)
T PRK07581 69 PEKYFIIIPNMFGNGLSSSPSNT-PAPFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPD 147 (339)
T ss_pred cCceEEEEecCCCCCCCCCCCCC-CCCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHH
Confidence 46899999999999999754211 11244432 4566654 7788999994 799999999999999999999
Q ss_pred hhcceEEeccCCCCCchhHHHHHHHHHHHHHh-------------hcchhHHHHHHHhhhhhhcccCC-----CCCC-ch
Q 044899 88 RVLGLILVSPICKAPSWTEWLYNKVLMNLLYF-------------YGMCGVLKECLLQRYFSKEFRSG-----EHGA-ES 148 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-~~ 148 (299)
+|+++|++++...................... .++.... .......+...+... .... .+
T Consensus 148 ~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (339)
T PRK07581 148 MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHA-RVYAGWGFSQAFYRQELWRAMGYASLE 226 (339)
T ss_pred HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHH-HHHHHHHhHHHHHHhhhccccChhhHH
Confidence 99999999987654332211111111000000 0000000 001001111111000 0000 01
Q ss_pred HHHH-HHHHHHhcccchhHHHHHHHHh-----h----ccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCce
Q 044899 149 DIIQ-ACRRVLDQGQSLNVMHFLQAIN-----E----RHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNC 216 (299)
Q Consensus 149 ~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~ 216 (299)
+... .+...............+..+. . ..++...+.++++|+|+|+|++|..++ ....+.+.++ ++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip--~a 304 (339)
T PRK07581 227 DFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIP--NA 304 (339)
T ss_pred HHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CC
Confidence 2221 2222222223333333322221 1 125677889999999999999999883 5566677676 78
Q ss_pred eEEEEcC-CCCcccccChHhHHHHHHHHHhhc
Q 044899 217 GLVEVQA-CGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 217 ~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
+++++++ +||++++|+++++++.|.+||+++
T Consensus 305 ~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 305 ELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred eEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 9999998 999999999999999999999875
No 18
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=1.7e-27 Score=198.51 Aligned_cols=220 Identities=14% Similarity=0.145 Sum_probs=135.8
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcE-EEEeeChhHHHHHHHHHhhhhhhcceEEec
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKV-LCLGVTAGAYILTLFAMKYQERVLGLILVS 96 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 96 (299)
+++|+||++|+||||.|.. ..++++++++|+.+++++++++++ +|+||||||++|+.+|.++|++|+++|+++
T Consensus 97 ~~~~~Vi~~Dl~G~g~s~~------~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~ 170 (343)
T PRK08775 97 PARFRLLAFDFIGADGSLD------VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVS 170 (343)
T ss_pred ccccEEEEEeCCCCCCCCC------CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEEC
Confidence 5799999999999997731 247889999999999999999775 799999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHhh---cch----hHHHHHH---------HhhhhhhcccCCCCCCchHHHHHH----HH
Q 044899 97 PICKAPSWTEWLYNKVLMNLLYFY---GMC----GVLKECL---------LQRYFSKEFRSGEHGAESDIIQAC----RR 156 (299)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~----~~ 156 (299)
+........... ........... +.. ....... ....+................... ..
T Consensus 171 s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 249 (343)
T PRK08775 171 GAHRAHPYAAAW-RALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQ 249 (343)
T ss_pred ccccCCHHHHHH-HHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHH
Confidence 875433211111 10000000000 000 0000000 001111000000000001111111 11
Q ss_pred HHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcC-CCCcccccCh
Q 044899 157 VLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQA-CGSLVTEEYP 233 (299)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p 233 (299)
.........+......... ....+.++++|+|+|+|++|.+++ ....+.+.+.. +++++++++ +||++++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~~---~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p-~a~l~~i~~~aGH~~~lE~P 325 (343)
T PRK08775 250 YVARTPVNAYLRLSESIDL---HRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGP-RGSLRVLRSPYGHDAFLKET 325 (343)
T ss_pred HHHhcChhHHHHHHHHHhh---cCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCC-CCeEEEEeCCccHHHHhcCH
Confidence 2222222222222222211 122467899999999999999884 45566666632 689999985 9999999999
Q ss_pred HhHHHHHHHHHhhcC
Q 044899 234 LAMLIPIELFLMGFG 248 (299)
Q Consensus 234 ~~~~~~i~~fl~~~~ 248 (299)
++|++.|.+||++.+
T Consensus 326 e~~~~~l~~FL~~~~ 340 (343)
T PRK08775 326 DRIDAILTTALRSTG 340 (343)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998764
No 19
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.96 E-value=3.9e-27 Score=189.00 Aligned_cols=224 Identities=20% Similarity=0.297 Sum_probs=143.5
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
......+.++|+|+++|+||||.|..+. ...++++++++++.++++.++.++++++||||||++++.++.++|++|+
T Consensus 30 ~~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~ 106 (257)
T TIGR03611 30 APQLDVLTQRFHVVTYDHRGTGRSPGEL---PPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLL 106 (257)
T ss_pred HHHHHHHHhccEEEEEcCCCCCCCCCCC---cccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhH
Confidence 3456678889999999999999997532 3458999999999999999999999999999999999999999999999
Q ss_pred ceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhc-ccchhHHHH
Q 044899 91 GLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQ-GQSLNVMHF 169 (299)
Q Consensus 91 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 169 (299)
++|++++.............. ............+. .......+...+.... ...........+.. .........
T Consensus 107 ~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 181 (257)
T TIGR03611 107 SLVLINAWSRPDPHTRRCFDV-RIALLQHAGPEAYV-HAQALFLYPADWISEN---AARLAADEAHALAHFPGKANVLRR 181 (257)
T ss_pred HheeecCCCCCChhHHHHHHH-HHHHHhccCcchhh-hhhhhhhccccHhhcc---chhhhhhhhhcccccCccHHHHHH
Confidence 999999865432211111000 00111100111110 0000000000000000 00000000000000 011111111
Q ss_pred HHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 170 LQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 170 ~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
...+ ...+....+.++++|+++++|++|.+++ .+..+.+.++ +.+++.++++||++++++|+++++.|.+||+
T Consensus 182 ~~~~-~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 182 INAL-EAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALP--NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHHH-HcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcC--CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 1222 2345567788899999999999999983 4556666666 6889999999999999999999999999986
No 20
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.96 E-value=2.9e-27 Score=200.86 Aligned_cols=224 Identities=13% Similarity=0.106 Sum_probs=134.4
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEec
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVA-EVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVS 96 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~-~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 96 (299)
..+|+|+++|+||||.|+.+. ...++++++++++. .++++++.++++++||||||++++.+|.++|++|+++|+++
T Consensus 230 ~~~yrVia~Dl~G~G~S~~p~---~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~ 306 (481)
T PLN03087 230 KSTYRLFAVDLLGFGRSPKPA---DSLYTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLA 306 (481)
T ss_pred hCCCEEEEECCCCCCCCcCCC---CCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEEC
Confidence 369999999999999997542 23589999999995 89999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCC--CCCCchHHHHHHHHHHhcc-------------
Q 044899 97 PICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSG--EHGAESDIIQACRRVLDQG------------- 161 (299)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~------------- 161 (299)
+...............+....................++....... .....+...+.+...+...
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~ 386 (481)
T PLN03087 307 PPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCH 386 (481)
T ss_pred CCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhc
Confidence 7654322111110000000000000000000000011110000000 0000011111111111100
Q ss_pred cchhHHHHHHHHh-h-----ccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccc-cC
Q 044899 162 QSLNVMHFLQAIN-E-----RHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTE-EY 232 (299)
Q Consensus 162 ~~~~~~~~~~~~~-~-----~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~ 232 (299)
........+..+. . ...+...+.++++|+|+|+|++|.+++ ..+.+++.++ ++++++++++||++++ |+
T Consensus 387 ~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP--~a~l~vI~~aGH~~~v~e~ 464 (481)
T PLN03087 387 THNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP--RARVKVIDDKDHITIVVGR 464 (481)
T ss_pred cchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC--CCEEEEeCCCCCcchhhcC
Confidence 0000000111010 0 011223344789999999999999983 5566778787 7999999999999886 99
Q ss_pred hHhHHHHHHHHHhh
Q 044899 233 PLAMLIPIELFLMG 246 (299)
Q Consensus 233 p~~~~~~i~~fl~~ 246 (299)
|+++++.|.+|...
T Consensus 465 p~~fa~~L~~F~~~ 478 (481)
T PLN03087 465 QKEFARELEEIWRR 478 (481)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999999864
No 21
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.96 E-value=4e-27 Score=185.06 Aligned_cols=211 Identities=22% Similarity=0.354 Sum_probs=140.0
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.|..+.+.|++||+|+++|+||||.|..... ...++++++++|+.+++++++.++++++|||+||.+++.++.++|++
T Consensus 13 ~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~ 90 (228)
T PF12697_consen 13 SWDPLAEALARGYRVIAFDLPGHGRSDPPPD--YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDR 90 (228)
T ss_dssp GGHHHHHHHHTTSEEEEEECTTSTTSSSHSS--GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHhCCCEEEEEecCCccccccccc--cCCcchhhhhhhhhhcccccccccccccccccccccccccccccccc
Confidence 3455677778999999999999999976431 24689999999999999999999999999999999999999999999
Q ss_pred hcceEEeccCCCCCchh-HHHHHHHHHHHHHhh--cchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchh
Q 044899 89 VLGLILVSPICKAPSWT-EWLYNKVLMNLLYFY--GMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLN 165 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
|+++|++++........ .......+....... ...... ......++. .....+.+.. ....
T Consensus 91 v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~~~~~-----~~~~ 154 (228)
T PF12697_consen 91 VKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLA-SRFFYRWFD----------GDEPEDLIRS-----SRRA 154 (228)
T ss_dssp EEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHT----------HHHHHHHHHH-----HHHH
T ss_pred cccceeecccccccccccccccchhhhhhhhcccccccccc-ccccccccc----------cccccccccc-----cccc
Confidence 99999999987533211 000011111111000 000000 011111111 0111111111 1111
Q ss_pred HHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHH
Q 044899 166 VMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIP 239 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 239 (299)
+...+.......+....++++++|+++++|++|.+++ ..+.+.+.++ ++++++++++||++++|+|+++++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 155 LAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP--NAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST--TEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred cccccccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC--CCEEEEECCCCCccHHHCHHHHhcC
Confidence 2222221012345567788899999999999999983 4556666666 7999999999999999999999864
No 22
>PLN02578 hydrolase
Probab=99.96 E-value=4.5e-27 Score=196.63 Aligned_cols=228 Identities=15% Similarity=0.196 Sum_probs=142.0
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.|..+.+.|.++|+|+++|+||||.|+.+ ...|+.+.+++++.++++.++.++++++||||||.+++.+|.++|++
T Consensus 101 ~w~~~~~~l~~~~~v~~~D~~G~G~S~~~----~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~ 176 (354)
T PLN02578 101 HWRYNIPELAKKYKVYALDLLGFGWSDKA----LIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPEL 176 (354)
T ss_pred HHHHHHHHHhcCCEEEEECCCCCCCCCCc----ccccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHh
Confidence 34456677888999999999999999764 23589999999999999999999999999999999999999999999
Q ss_pred hcceEEeccCCCCCchhH----------HHHHHHHHHHHHhhcchhHHHH---------HHHhhhhhhcccCCCCCCchH
Q 044899 89 VLGLILVSPICKAPSWTE----------WLYNKVLMNLLYFYGMCGVLKE---------CLLQRYFSKEFRSGEHGAESD 149 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 149 (299)
|+++|++++......... ............. ........ ......+...+... ...++.
T Consensus 177 v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 254 (354)
T PLN02578 177 VAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKE-WFQRVVLGFLFWQAKQPSRIESVLKSVYKDK-SNVDDY 254 (354)
T ss_pred cceEEEECCCccccccccccccccccccchhhHHHhHHHHH-HHHHHHHHHHHHHhcCHHHHHHHHHHhcCCc-ccCCHH
Confidence 999999987543211000 0000000000000 00000000 00000000000000 000111
Q ss_pred HHHHHHHHHhcc-cchhHHHHHHHHh---hccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcC
Q 044899 150 IIQACRRVLDQG-QSLNVMHFLQAIN---ERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQA 223 (299)
Q Consensus 150 ~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~ 223 (299)
..+.+....... ....+...+..+. ...+..+.++++++|+++|+|++|.++ ..+..+.+.++ +.+++++ +
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p--~a~l~~i-~ 331 (354)
T PLN02578 255 LVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYP--DTTLVNL-Q 331 (354)
T ss_pred HHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCC--CCEEEEe-C
Confidence 111111110000 1111122222211 123456678899999999999999988 35556667666 6788888 5
Q ss_pred CCCcccccChHhHHHHHHHHHh
Q 044899 224 CGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 224 ~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
+||+++.|+|+++++.|.+|++
T Consensus 332 ~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 332 AGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred CCCCccccCHHHHHHHHHHHHh
Confidence 9999999999999999999986
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=7.4e-28 Score=201.31 Aligned_cols=224 Identities=17% Similarity=0.167 Sum_probs=139.2
Q ss_pred HhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC------cEEEEeeChhHHHHHHHHH
Q 044899 11 PDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE------KVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 11 ~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~------~~~lvGhS~Gg~ia~~~a~ 83 (299)
..+...|. .||+|+++|+||||.|+... ....+++++++|+.++++.+..+ +++|+||||||++++.++.
T Consensus 105 ~~~~~~l~~~g~~v~~~D~~G~G~S~~~~---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~ 181 (349)
T PLN02385 105 EGIARKIASSGYGVFAMDYPGFGLSEGLH---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHL 181 (349)
T ss_pred HHHHHHHHhCCCEEEEecCCCCCCCCCCC---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHH
Confidence 34455554 59999999999999997431 22358999999999999887643 7999999999999999999
Q ss_pred hhhhhhcceEEeccCCCCCch--hHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHH--Hh
Q 044899 84 KYQERVLGLILVSPICKAPSW--TEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRV--LD 159 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 159 (299)
++|++|+++|+++|....... ........+............ .....+...... ... ....... ..
T Consensus 182 ~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~-----~~~-~~~~~~~~~~~ 251 (349)
T PLN02385 182 KQPNAWDGAILVAPMCKIADDVVPPPLVLQILILLANLLPKAKL----VPQKDLAELAFR-----DLK-KRKMAEYNVIA 251 (349)
T ss_pred hCcchhhheeEecccccccccccCchHHHHHHHHHHHHCCCcee----cCCCcccccccc-----CHH-HHHHhhcCcce
Confidence 999999999999987543211 001101110000000000000 000000000000 000 0000000 00
Q ss_pred cccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHh--
Q 044899 160 QGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLA-- 235 (299)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~-- 235 (299)
.............+....+....+.++++|+|+|+|++|.+++ .++.+.+.+..++.++++++++||+++.|+|++
T Consensus 252 ~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~ 331 (349)
T PLN02385 252 YKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMI 331 (349)
T ss_pred eCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhH
Confidence 0001111122222222234556778899999999999999983 566777777555789999999999999999987
Q ss_pred --HHHHHHHHHhhc
Q 044899 236 --MLIPIELFLMGF 247 (299)
Q Consensus 236 --~~~~i~~fl~~~ 247 (299)
+.+.|.+||++.
T Consensus 332 ~~v~~~i~~wL~~~ 345 (349)
T PLN02385 332 FQVLDDIISWLDSH 345 (349)
T ss_pred HHHHHHHHHHHHHh
Confidence 888899999865
No 24
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=1.2e-26 Score=193.48 Aligned_cols=230 Identities=13% Similarity=0.068 Sum_probs=140.5
Q ss_pred ccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh
Q 044899 8 FFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 8 ~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
..|..++..|+++|+|+++|+||||.|+.+.......++++++++++.++++++++++++|+|||+||++++.+|.++|+
T Consensus 141 ~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~ 220 (383)
T PLN03084 141 YSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPD 220 (383)
T ss_pred HHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChH
Confidence 34566778888999999999999999976532212358999999999999999999999999999999999999999999
Q ss_pred hhcceEEeccCCCCCch-hHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc--h
Q 044899 88 RVLGLILVSPICKAPSW-TEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS--L 164 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 164 (299)
+|+++|++++....... .... ...+............... .....+... ......++....+...+..... .
T Consensus 221 ~v~~lILi~~~~~~~~~~~p~~-l~~~~~~l~~~~~~~~~~~-~~~~~~~~~---~~~~~~~e~~~~~~~~~~~~~~~~~ 295 (383)
T PLN03084 221 KIKKLILLNPPLTKEHAKLPST-LSEFSNFLLGEIFSQDPLR-ASDKALTSC---GPYAMKEDDAMVYRRPYLTSGSSGF 295 (383)
T ss_pred hhcEEEEECCCCccccccchHH-HHHHHHHHhhhhhhcchHH-HHhhhhccc---CccCCCHHHHHHHhccccCCcchHH
Confidence 99999999986532110 0000 0000000000000000000 000011000 0000012222222221111111 0
Q ss_pred hHHHHHHHHhhc-cc----hhhhh--ccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHh
Q 044899 165 NVMHFLQAINER-HD----LTKGL--KELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLA 235 (299)
Q Consensus 165 ~~~~~~~~~~~~-~~----~~~~l--~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~ 235 (299)
......+.+... .. ....+ .++++|+++|+|++|.+++ ..+.+.+. . +.++++++++||++++|+|++
T Consensus 296 ~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~--~a~l~vIp~aGH~~~~E~Pe~ 372 (383)
T PLN03084 296 ALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-S--QHKLIELPMAGHHVQEDCGEE 372 (383)
T ss_pred HHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-c--CCeEEEECCCCCCcchhCHHH
Confidence 111112222110 01 11111 3579999999999999883 34444443 3 688999999999999999999
Q ss_pred HHHHHHHHHh
Q 044899 236 MLIPIELFLM 245 (299)
Q Consensus 236 ~~~~i~~fl~ 245 (299)
+++.|.+|+.
T Consensus 373 v~~~I~~Fl~ 382 (383)
T PLN03084 373 LGGIISGILS 382 (383)
T ss_pred HHHHHHHHhh
Confidence 9999999986
No 25
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=6.6e-27 Score=190.12 Aligned_cols=224 Identities=18% Similarity=0.184 Sum_probs=137.0
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+...|.++|+|+++|+||||.|+.+. ...++++++++++.+++++++.++++++||||||.+++.++..+|++|
T Consensus 50 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v 126 (286)
T PRK03204 50 YRDIIVALRDRFRCVAPDYLGFGLSERPS---GFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRV 126 (286)
T ss_pred HHHHHHHHhCCcEEEEECCCCCCCCCCCC---ccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhhe
Confidence 45567788889999999999999997532 235789999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcc-hhHHH-HHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc-chhH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGM-CGVLK-ECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ-SLNV 166 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 166 (299)
+++|++++......... ............. ..... .....+++....... ..++....+........ ....
T Consensus 127 ~~lvl~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 200 (286)
T PRK03204 127 RGVVLGNTWFWPADTLA---MKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHR---PSSAVMAHYRAVQPNAAARRGV 200 (286)
T ss_pred eEEEEECccccCCCchh---HHHHHHHhccccchhhhhhhhHHHHHhccccccCC---CCHHHHHHhcCCCCCHHHHHHH
Confidence 99999887542211100 0000000000000 00000 111112211111000 01122222211110000 0000
Q ss_pred HHHHHHHhhc----cchhhhhcc--CCcceEEEecCCCCCC-c--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHH
Q 044899 167 MHFLQAINER----HDLTKGLKE--LQCKTLIFVGESSPFH-T--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAML 237 (299)
Q Consensus 167 ~~~~~~~~~~----~~~~~~l~~--i~~Pvl~i~G~~D~~~-~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~ 237 (299)
......+... .+....+.. +++|+++|+|++|.++ + ..+.+.+.++ +.++++++++||++++|+|++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip--~~~~~~i~~aGH~~~~e~Pe~~~ 278 (286)
T PRK03204 201 AEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFP--DHVLVELPNAKHFIQEDAPDRIA 278 (286)
T ss_pred HHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcC--CCeEEEcCCCcccccccCHHHHH
Confidence 0000000000 011111111 2899999999999886 3 2456677777 78999999999999999999999
Q ss_pred HHHHHHH
Q 044899 238 IPIELFL 244 (299)
Q Consensus 238 ~~i~~fl 244 (299)
+.|.+||
T Consensus 279 ~~i~~~~ 285 (286)
T PRK03204 279 AAIIERF 285 (286)
T ss_pred HHHHHhc
Confidence 9999997
No 26
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.95 E-value=1e-26 Score=189.00 Aligned_cols=224 Identities=17% Similarity=0.110 Sum_probs=139.5
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+.+.|+++|+|+++|+||||.|+.+. ...++++++++|+.+++++++.++++|+||||||.+++.+|.++|+++
T Consensus 44 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v 120 (278)
T TIGR03056 44 WRDLMPPLARSFRVVAPDLPGHGFTRAPF---RFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTP 120 (278)
T ss_pred HHHHHHHHhhCcEEEeecCCCCCCCCCcc---ccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCccc
Confidence 34566778889999999999999997542 235899999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCch-hHHHHHHHHHHHHHhhcc-hhHHHHH-----HHhhhhhhcccCCCCCCchHHHHHHHHHHhccc
Q 044899 90 LGLILVSPICKAPSW-TEWLYNKVLMNLLYFYGM-CGVLKEC-----LLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ 162 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
+++|++++....... .... ............. ....... ....++... ... ..+.....+......
T Consensus 121 ~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~-- 193 (278)
T TIGR03056 121 RMVVGINAALMPFEGMAGTL-FPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT-GSL---LDKAGMTYYGRLIRS-- 193 (278)
T ss_pred ceEEEEcCcccccccccccc-cchhhHhhhhcccchHHHHhhcccCcchhHHhhcc-ccc---cccchhhHHHHhhcC--
Confidence 999999875432110 0000 0000000000000 0000000 000000000 000 011111111111111
Q ss_pred chhHHHHHHHHh--hccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHH
Q 044899 163 SLNVMHFLQAIN--ERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLI 238 (299)
Q Consensus 163 ~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 238 (299)
..........+. ........++++++|+++|+|++|..++ ..+.+.+.++ +++++.++++||++++|.|+++++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~ 271 (278)
T TIGR03056 194 PAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKRAATRVP--TATLHVVPGGGHLVHEEQADGVVG 271 (278)
T ss_pred chhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHHHHHhcc--CCeEEEECCCCCcccccCHHHHHH
Confidence 000111111110 1122345677899999999999999883 4556666666 689999999999999999999999
Q ss_pred HHHHHHh
Q 044899 239 PIELFLM 245 (299)
Q Consensus 239 ~i~~fl~ 245 (299)
.|.+|++
T Consensus 272 ~i~~f~~ 278 (278)
T TIGR03056 272 LILQAAE 278 (278)
T ss_pred HHHHHhC
Confidence 9999984
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.95 E-value=2.8e-26 Score=191.85 Aligned_cols=229 Identities=18% Similarity=0.238 Sum_probs=141.1
Q ss_pred hhhhcCcEEEEECCCC--CCCCCCCC--CC------CCCCCCHHHHHHHHHHHHHHhCCCc-EEEEeeChhHHHHHHHHH
Q 044899 15 SLLLHNFCIYHIDASG--HELGADEI--YS------DFPLLNVDDLAEQVAEVLDFFGLEK-VLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G--~G~S~~~~--~~------~~~~~~~~~~~~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~ 83 (299)
.++.++|+|+++|+|| ||.|.... +. +...++++++++++.++++++++++ ++|+||||||++++.+|.
T Consensus 67 ~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~ 146 (351)
T TIGR01392 67 AIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAI 146 (351)
T ss_pred CcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHH
Confidence 4557899999999999 55543210 00 1225899999999999999999998 999999999999999999
Q ss_pred hhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhh---------------cch--hHH------HHHHHhhhhhhccc
Q 044899 84 KYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFY---------------GMC--GVL------KECLLQRYFSKEFR 140 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~--~~~------~~~~~~~~~~~~~~ 140 (299)
++|++|+++|++++......+................ +.. ... ....+..+|.....
T Consensus 147 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 226 (351)
T TIGR01392 147 DYPERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQ 226 (351)
T ss_pred HChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcc
Confidence 9999999999999877654332111110000000000 000 000 00001111211110
Q ss_pred CC-CCC---CchHHHHHHH-----HHHhcccchhHHHHHHHHhh------ccchhhhhccCCcceEEEecCCCCCC--ch
Q 044899 141 SG-EHG---AESDIIQACR-----RVLDQGQSLNVMHFLQAINE------RHDLTKGLKELQCKTLIFVGESSPFH--TE 203 (299)
Q Consensus 141 ~~-~~~---~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~ 203 (299)
.. ... ......+.+. ..+.......+......+.. ..++.+.+++|++|+|+|+|++|.++ ..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~ 306 (351)
T TIGR01392 227 SGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAE 306 (351)
T ss_pred cccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHH
Confidence 00 000 0000011111 12222233333333333321 13456889999999999999999987 35
Q ss_pred hHHHHHhhCCCceeEE-----EEcCCCCcccccChHhHHHHHHHHHh
Q 044899 204 SLHMSATMGSKNCGLV-----EVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 204 ~~~~~~~~~~~~~~~~-----~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
.+.+.+.++ +.+++ +++++||++++|+|+++++.|.+||+
T Consensus 307 ~~~~a~~i~--~~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 307 SRELAKALP--AAGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHh--hcCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 677888887 44443 45789999999999999999999984
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.95 E-value=3.3e-26 Score=192.84 Aligned_cols=234 Identities=15% Similarity=0.188 Sum_probs=145.2
Q ss_pred hhhhcCcEEEEECCCCC-CCCCCCCCC----------CCCCCCHHHHHHHHHHHHHHhCCCc-EEEEeeChhHHHHHHHH
Q 044899 15 SLLLHNFCIYHIDASGH-ELGADEIYS----------DFPLLNVDDLAEQVAEVLDFFGLEK-VLCLGVTAGAYILTLFA 82 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~-G~S~~~~~~----------~~~~~~~~~~~~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a 82 (299)
.++.++|+||++|++|+ |.|..+... ....++++++++++.++++++++++ ++|+||||||++++.+|
T Consensus 86 ~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a 165 (379)
T PRK00175 86 PIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWA 165 (379)
T ss_pred ccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHH
Confidence 44578999999999993 555332110 1125899999999999999999999 59999999999999999
Q ss_pred HhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhh----------cchh--------------HHHHHHHhhhhhhc
Q 044899 83 MKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFY----------GMCG--------------VLKECLLQRYFSKE 138 (299)
Q Consensus 83 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~--------------~~~~~~~~~~~~~~ 138 (299)
.++|++|+++|++++....................... +... ..........|...
T Consensus 166 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~ 245 (379)
T PRK00175 166 IDYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRE 245 (379)
T ss_pred HhChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcc
Confidence 99999999999999876543321111000000000000 0000 00001111222221
Q ss_pred ccCCCC---CCchHHHHHHH-----HHHhcccchhHHHHHHHHhhc-------cchhhhhccCCcceEEEecCCCCCC--
Q 044899 139 FRSGEH---GAESDIIQACR-----RVLDQGQSLNVMHFLQAINER-------HDLTKGLKELQCKTLIFVGESSPFH-- 201 (299)
Q Consensus 139 ~~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~i~~Pvl~i~G~~D~~~-- 201 (299)
...... .......+.+. ..........+......+... .++.+.+.+|++|+|+|+|++|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~ 325 (379)
T PRK00175 246 LQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPP 325 (379)
T ss_pred ccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCH
Confidence 111100 00001111111 122233333333333332111 2467889999999999999999987
Q ss_pred chhHHHHHhhCCC--ceeEEEEc-CCCCcccccChHhHHHHHHHHHhhcC
Q 044899 202 TESLHMSATMGSK--NCGLVEVQ-ACGSLVTEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 202 ~~~~~~~~~~~~~--~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~~ 248 (299)
+..+.+.+.++.. .+++++++ ++||++++|+|+++++.|.+||++..
T Consensus 326 ~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 326 ARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 3566778888632 23777775 89999999999999999999998764
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.95 E-value=1.5e-26 Score=191.80 Aligned_cols=234 Identities=13% Similarity=0.092 Sum_probs=139.3
Q ss_pred hhH-hhhhcCcEEEEECCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHh
Q 044899 12 DAA-SLLLHNFCIYHIDASGHELGADEIYS--DFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 12 ~~~-~~l~~~~~vi~~D~~G~G~S~~~~~~--~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.++ .++..||+|+++|+||||.|+.+... ....++++++++|+.++++.+ +..+++++||||||.+++.++.+
T Consensus 72 ~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~ 151 (330)
T PRK10749 72 ELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQR 151 (330)
T ss_pred HHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHh
Confidence 344 35578999999999999999753211 112358999999999999887 66799999999999999999999
Q ss_pred hhhhhcceEEeccCCCCCch-hHHHHHHHHHHHHHhh-cchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc
Q 044899 85 YQERVLGLILVSPICKAPSW-TEWLYNKVLMNLLYFY-GMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ 162 (299)
Q Consensus 85 ~p~~v~~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
+|++|+++|+++|....... ........ ....... ...... ......+.............++....+.+.+....
T Consensus 152 ~p~~v~~lvl~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 229 (330)
T PRK10749 152 HPGVFDAIALCAPMFGIVLPLPSWMARRI-LNWAEGHPRIRDGY-AIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDP 229 (330)
T ss_pred CCCCcceEEEECchhccCCCCCcHHHHHH-HHHHHHhcCCCCcC-CCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999999987543211 11110111 0000000 000000 00000111000000000012222222223222211
Q ss_pred c-----hhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCC-----CceeEEEEcCCCCcccc
Q 044899 163 S-----LNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGS-----KNCGLVEVQACGSLVTE 230 (299)
Q Consensus 163 ~-----~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~-----~~~~~~~~~~~gH~~~~ 230 (299)
. ..+......+.........+.++++|+|+|+|++|.+++ .+..+.+.++. .++++++++|+||.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~ 309 (330)
T PRK10749 230 ELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILF 309 (330)
T ss_pred CcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhh
Confidence 1 011111122111123345677899999999999999993 45556665532 35689999999999998
Q ss_pred cCh---HhHHHHHHHHHhhc
Q 044899 231 EYP---LAMLIPIELFLMGF 247 (299)
Q Consensus 231 e~p---~~~~~~i~~fl~~~ 247 (299)
|.+ +.+.+.|.+||++.
T Consensus 310 E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 310 EKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCcHHHHHHHHHHHHHHhhc
Confidence 876 55888999999764
No 30
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.95 E-value=1.6e-26 Score=183.96 Aligned_cols=216 Identities=15% Similarity=0.113 Sum_probs=136.0
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+.+.|.++|+|+++|+||||.|... ..++++++++++.+.+ .++++++||||||.+++.++.++|+++
T Consensus 20 ~~~~~~~l~~~~~vi~~d~~G~G~s~~~-----~~~~~~~~~~~~~~~~----~~~~~lvG~S~Gg~~a~~~a~~~p~~v 90 (245)
T TIGR01738 20 FRCLDEELSAHFTLHLVDLPGHGRSRGF-----GPLSLADAAEAIAAQA----PDPAIWLGWSLGGLVALHIAATHPDRV 90 (245)
T ss_pred HHHHHHhhccCeEEEEecCCcCccCCCC-----CCcCHHHHHHHHHHhC----CCCeEEEEEcHHHHHHHHHHHHCHHhh
Confidence 4556777888999999999999998542 2467888888777654 268999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHH---HHHHHHHHHHHh--hcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc-
Q 044899 90 LGLILVSPICKAPSWTEW---LYNKVLMNLLYF--YGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS- 163 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 163 (299)
.++|++++.+.......+ ............ .........+.....+.... ..+....+...+.....
T Consensus 91 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 163 (245)
T TIGR01738 91 RALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPT-------ARQDARALKQTLLARPTP 163 (245)
T ss_pred heeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc-------cchHHHHHHHHhhccCCC
Confidence 999999876543211100 000000000000 00000110111001111000 11111222222222111
Q ss_pred --hhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHH
Q 044899 164 --LNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIP 239 (299)
Q Consensus 164 --~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 239 (299)
......+..+ ...+....+.++++|+++|+|++|.+++ ..+.+.+.++ ++++++++++||++++|+|+++++.
T Consensus 164 ~~~~~~~~~~~~-~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~ 240 (245)
T TIGR01738 164 NVQVLQAGLEIL-ATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP--HSELYIFAKAAHAPFLSHAEAFCAL 240 (245)
T ss_pred CHHHHHHHHHHh-hcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC--CCeEEEeCCCCCCccccCHHHHHHH
Confidence 1222222222 3345667788999999999999999883 4455666666 7899999999999999999999999
Q ss_pred HHHHH
Q 044899 240 IELFL 244 (299)
Q Consensus 240 i~~fl 244 (299)
|.+|+
T Consensus 241 i~~fi 245 (245)
T TIGR01738 241 LVAFK 245 (245)
T ss_pred HHhhC
Confidence 99985
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.95 E-value=3.1e-26 Score=182.67 Aligned_cols=227 Identities=22% Similarity=0.275 Sum_probs=143.7
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQ-VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d-l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
|..+...|+++|+|+++|+||||.|..+ .....+++++++++ +..+++.++.++++++||||||.+++.+|.++|+.
T Consensus 17 ~~~~~~~L~~~~~v~~~d~~g~G~s~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~ 94 (251)
T TIGR03695 17 WQALIELLGPHFRCLAIDLPGHGSSQSP--DEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPER 94 (251)
T ss_pred HHHHHHHhcccCeEEEEcCCCCCCCCCC--CccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchh
Confidence 4456667778999999999999999653 22345789999999 88888999989999999999999999999999999
Q ss_pred hcceEEeccCCCCCchhHHHHH----HHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccch
Q 044899 89 VLGLILVSPICKAPSWTEWLYN----KVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSL 164 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (299)
|++++++++.+........... ......+.......+. ..++............++....+..........
T Consensus 95 v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (251)
T TIGR03695 95 VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFL-----DDWYQQPLFASQKNLPPEQRQALRAKRLANNPE 169 (251)
T ss_pred eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHH-----HHHhcCceeeecccCChHHhHHHHHhcccccch
Confidence 9999999986544322111100 0001111111111111 111111100000000122222222211111222
Q ss_pred hHHHHHHHH--hhccchhhhhccCCcceEEEecCCCCCCc-hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHH
Q 044899 165 NVMHFLQAI--NERHDLTKGLKELQCKTLIFVGESSPFHT-ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIE 241 (299)
Q Consensus 165 ~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 241 (299)
.....+... ....+....+.++++|+++|+|++|..++ ....+.+..+ +.++++++++||++++|+|+++++.|.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~~~~~~~~i~ 247 (251)
T TIGR03695 170 GLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFVQIAKEMQKLLP--NLTLVIIANAGHNIHLENPEAFAKILL 247 (251)
T ss_pred HHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHHHHHHHHHhcCC--CCcEEEEcCCCCCcCccChHHHHHHHH
Confidence 222222211 12234456678899999999999998763 3444555454 689999999999999999999999999
Q ss_pred HHHh
Q 044899 242 LFLM 245 (299)
Q Consensus 242 ~fl~ 245 (299)
+|++
T Consensus 248 ~~l~ 251 (251)
T TIGR03695 248 AFLE 251 (251)
T ss_pred HHhC
Confidence 9984
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.94 E-value=2e-25 Score=181.97 Aligned_cols=223 Identities=19% Similarity=0.255 Sum_probs=137.2
Q ss_pred HhhHhhhhc-CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 11 PDAASLLLH-NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 11 ~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
..+..++.+ ||+|+++|+||||.|..+.. ....++++++++++.+++++++.++++++||||||.+++.+|.++|++|
T Consensus 43 ~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v 121 (288)
T TIGR01250 43 ENLRELLKEEGREVIMYDQLGCGYSDQPDD-SDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHL 121 (288)
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-ccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCcccc
Confidence 345556665 89999999999999874321 1113799999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHH-------------HHHhhhhhhcccCCCCCCchHHHHHHHH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKE-------------CLLQRYFSKEFRSGEHGAESDIIQACRR 156 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (299)
+++|++++....+........ .... +.. ........ .....+......... ..+.......
T Consensus 122 ~~lvl~~~~~~~~~~~~~~~~-~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~- 195 (288)
T TIGR01250 122 KGLIISSMLDSAPEYVKELNR-LRKE-LPP-EVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTR--KWPEALKHLK- 195 (288)
T ss_pred ceeeEecccccchHHHHHHHH-HHhh-cCh-hHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccc--cchHHHHHHh-
Confidence 999999986543322211100 0000 000 00000000 000000000000000 0000000000
Q ss_pred HHhcccchhHHHHH--------HHHhhccchhhhhccCCcceEEEecCCCCCC-chhHHHHHhhCCCceeEEEEcCCCCc
Q 044899 157 VLDQGQSLNVMHFL--------QAINERHDLTKGLKELQCKTLIFVGESSPFH-TESLHMSATMGSKNCGLVEVQACGSL 227 (299)
Q Consensus 157 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~ 227 (299)
... .......+ .......+....+.+++||+++++|++|.+. .....+.+.++ +.++++++++||+
T Consensus 196 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~--~~~~~~~~~~gH~ 270 (288)
T TIGR01250 196 --SGM-NTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTMTPEAAREMQELIA--GSRLVVFPDGSHM 270 (288)
T ss_pred --hcc-CHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCccCHHHHHHHHHhcc--CCeEEEeCCCCCC
Confidence 000 00000000 0001123455677889999999999999865 34455666555 6889999999999
Q ss_pred ccccChHhHHHHHHHHHh
Q 044899 228 VTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 228 ~~~e~p~~~~~~i~~fl~ 245 (299)
+++|+|+++++.|.+||+
T Consensus 271 ~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 271 TMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred cccCCHHHHHHHHHHHhC
Confidence 999999999999999984
No 33
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=4.7e-26 Score=184.79 Aligned_cols=223 Identities=15% Similarity=0.141 Sum_probs=132.3
Q ss_pred CHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHh
Q 044899 10 CPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 10 ~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
|..+...|. .||+|+++|+||||.|+.. .....++.++++|+.+.++.+ ...+++|+||||||.+|+.+|.+
T Consensus 41 ~~~~~~~l~~~g~~via~D~~G~G~S~~~---~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~ 117 (276)
T PHA02857 41 YEELAENISSLGILVFSHDHIGHGRSNGE---KMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYK 117 (276)
T ss_pred HHHHHHHHHhCCCEEEEccCCCCCCCCCc---cCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHh
Confidence 345566664 5999999999999999642 122346677777777777654 34589999999999999999999
Q ss_pred hhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccch
Q 044899 85 YQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSL 164 (299)
Q Consensus 85 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (299)
+|++++++|+++|........ . ...+........... .....+ ....... ...+........+......
T Consensus 118 ~p~~i~~lil~~p~~~~~~~~-~--~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~ 186 (276)
T PHA02857 118 NPNLFTAMILMSPLVNAEAVP-R--LNLLAAKLMGIFYPN----KIVGKL-CPESVSR---DMDEVYKYQYDPLVNHEKI 186 (276)
T ss_pred CccccceEEEecccccccccc-H--HHHHHHHHHHHhCCC----CccCCC-CHhhccC---CHHHHHHHhcCCCccCCCc
Confidence 999999999999865422110 0 000000000000000 000000 0000000 0001100000000000000
Q ss_pred hHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccCh---HhHHHH
Q 044899 165 NVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYP---LAMLIP 239 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~ 239 (299)
.............+....+.++++|+|+|+|++|.++ ..+.++.+.+.. ++++++++++||.++.|++ +++.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-~~~~~~~~~~gH~~~~e~~~~~~~~~~~ 265 (276)
T PHA02857 187 KAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANC-NREIKIYEGAKHHLHKETDEVKKSVMKE 265 (276)
T ss_pred cHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccC-CceEEEeCCCcccccCCchhHHHHHHHH
Confidence 0000111111123345678899999999999999998 356667676643 6899999999999999876 458899
Q ss_pred HHHHHhhc
Q 044899 240 IELFLMGF 247 (299)
Q Consensus 240 i~~fl~~~ 247 (299)
+.+||++.
T Consensus 266 ~~~~l~~~ 273 (276)
T PHA02857 266 IETWIFNR 273 (276)
T ss_pred HHHHHHHh
Confidence 99999864
No 34
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.94 E-value=2.8e-26 Score=187.23 Aligned_cols=237 Identities=18% Similarity=0.211 Sum_probs=144.7
Q ss_pred ccccCHhhHhhhhcC--cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 6 GLFFCPDAASLLLHN--FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 6 ~~~~~~~~~~~l~~~--~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+.|...+..+.+. ++|+++|++|||.++.. +....|+..++++.+..++.....++++++|||+||.+|+.+|+
T Consensus 70 ~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~--~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa 147 (326)
T KOG1454|consen 70 SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPL--PRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAA 147 (326)
T ss_pred CcccHhhhccccccccceEEEEEecCCCCcCCCC--CCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHH
Confidence 445677788888876 99999999999954432 22345999999999999999999999999999999999999999
Q ss_pred hhhhhhcceE---EeccCCCCCchhHHHHHHHHHHHHHhhcchh--HH--HHHHHhhhhhhcccCCCCCCchHHHHHHHH
Q 044899 84 KYQERVLGLI---LVSPICKAPSWTEWLYNKVLMNLLYFYGMCG--VL--KECLLQRYFSKEFRSGEHGAESDIIQACRR 156 (299)
Q Consensus 84 ~~p~~v~~lv---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (299)
.+|+.|+++| ++++...............+........... .. ........+....... ........+....
T Consensus 148 ~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 226 (326)
T KOG1454|consen 148 YYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVV-YTDPSRLLEKLLH 226 (326)
T ss_pred hCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeee-ccccccchhhhhh
Confidence 9999999999 5555444333222211111111111000000 00 0000000000000000 0000111111111
Q ss_pred HHhccc-----chhHHHHHHHHhh-ccchhhhhccCC-cceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCc
Q 044899 157 VLDQGQ-----SLNVMHFLQAINE-RHDLTKGLKELQ-CKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSL 227 (299)
Q Consensus 157 ~~~~~~-----~~~~~~~~~~~~~-~~~~~~~l~~i~-~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~ 227 (299)
.+.... ......++..... .......++++. ||+|+|+|++|.++ +.+..+.+.++ ++++++++++||.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~p--n~~~~~I~~~gH~ 304 (326)
T KOG1454|consen 227 LLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKLP--NAELVEIPGAGHL 304 (326)
T ss_pred heecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhCC--CceEEEeCCCCcc
Confidence 111100 0000000111100 122233456666 99999999999999 35677777774 8999999999999
Q ss_pred ccccChHhHHHHHHHHHhhc
Q 044899 228 VTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 228 ~~~e~p~~~~~~i~~fl~~~ 247 (299)
+++|.|+++++.|..|++..
T Consensus 305 ~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 305 PHLERPEEVAALLRSFIARL 324 (326)
T ss_pred cccCCHHHHHHHHHHHHHHh
Confidence 99999999999999999865
No 35
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.94 E-value=8.6e-25 Score=211.05 Aligned_cols=233 Identities=19% Similarity=0.253 Sum_probs=152.8
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIY----SDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
|..+...|.++|+|+++|+||||.|..... .....++++++++++.+++++++.++++|+||||||.+++.++.++
T Consensus 1387 w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~ 1466 (1655)
T PLN02980 1387 WIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRF 1466 (1655)
T ss_pred HHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhC
Confidence 445667788899999999999999965321 0123578999999999999999999999999999999999999999
Q ss_pred hhhhcceEEeccCCCCCchhHHHHHHH----HHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcc
Q 044899 86 QERVLGLILVSPICKAPSWTEWLYNKV----LMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQG 161 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
|++|+++|++++.+.......+..... ....+...+. ..+...++........ ...+...+.+...+...
T Consensus 1467 P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 1540 (1655)
T PLN02980 1467 SDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGL-----EIFLENWYSGELWKSL-RNHPHFNKIVASRLLHK 1540 (1655)
T ss_pred hHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhH-----HHHHHHhccHHHhhhh-ccCHHHHHHHHHHHhcC
Confidence 999999999987654322111110000 0000101111 1122223322211100 00122222222222222
Q ss_pred cchhHHHHHHHHh--hccchhhhhccCCcceEEEecCCCCCCc-hhHHHHHhhCCC----------ceeEEEEcCCCCcc
Q 044899 162 QSLNVMHFLQAIN--ERHDLTKGLKELQCKTLIFVGESSPFHT-ESLHMSATMGSK----------NCGLVEVQACGSLV 228 (299)
Q Consensus 162 ~~~~~~~~~~~~~--~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~----------~~~~~~~~~~gH~~ 228 (299)
........+..+. ...++.+.+.++++|+|+|+|++|..++ .+.++.+.++.. .+++++++++||++
T Consensus 1541 ~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~ 1620 (1655)
T PLN02980 1541 DVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFKQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAV 1620 (1655)
T ss_pred CHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccHHHHHHHHHHccccccccccccccceEEEEECCCCCch
Confidence 2223333333321 2345677899999999999999999874 455666666531 26899999999999
Q ss_pred cccChHhHHHHHHHHHhhcC
Q 044899 229 TEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 229 ~~e~p~~~~~~i~~fl~~~~ 248 (299)
++|+|+++++.|.+||++..
T Consensus 1621 ~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1621 HLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred HHHCHHHHHHHHHHHHHhcc
Confidence 99999999999999999753
No 36
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=3.4e-25 Score=184.16 Aligned_cols=222 Identities=15% Similarity=0.136 Sum_probs=134.7
Q ss_pred CHhhHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------CcEEEEeeChhHHHHHHHH
Q 044899 10 CPDAASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL------EKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 10 ~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a 82 (299)
+..+...| .+||+|+++|+||||.|.... ....+++.+++|+.++++.++. .+++|+||||||++++.++
T Consensus 76 ~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a 152 (330)
T PLN02298 76 FQSTAIFLAQMGFACFALDLEGHGRSEGLR---AYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIH 152 (330)
T ss_pred hhHHHHHHHhCCCEEEEecCCCCCCCCCcc---ccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHH
Confidence 33334434 569999999999999996421 2245899999999999998753 3799999999999999999
Q ss_pred HhhhhhhcceEEeccCCCCCchh--HHHHHHHHHHHHHhhcchhHHHHHHHhhhh-hhc--ccCCCCCCchHHHHHHHHH
Q 044899 83 MKYQERVLGLILVSPICKAPSWT--EWLYNKVLMNLLYFYGMCGVLKECLLQRYF-SKE--FRSGEHGAESDIIQACRRV 157 (299)
Q Consensus 83 ~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~ 157 (299)
.++|++|+++|++++........ .+..... ..... .. ..... ... ..... ..... ...+...
T Consensus 153 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~-~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~ 219 (330)
T PLN02298 153 LANPEGFDGAVLVAPMCKISDKIRPPWPIPQI-LTFVA---------RF-LPTLAIVPTADLLEKS-VKVPA-KKIIAKR 219 (330)
T ss_pred hcCcccceeEEEecccccCCcccCCchHHHHH-HHHHH---------HH-CCCCccccCCCccccc-ccCHH-HHHHHHh
Confidence 99999999999999865432110 1100000 00000 00 00000 000 00000 00000 0000000
Q ss_pred -Hhccc-chhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccCh
Q 044899 158 -LDQGQ-SLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYP 233 (299)
Q Consensus 158 -~~~~~-~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 233 (299)
..... ..........+.........+.++++|+|+|+|++|.++ ..++.+++.++.++.++++++++||.+++++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~p 299 (330)
T PLN02298 220 NPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEP 299 (330)
T ss_pred CccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCC
Confidence 00000 000001111111112234567889999999999999999 35566777776557899999999999999888
Q ss_pred Hh----HHHHHHHHHhhc
Q 044899 234 LA----MLIPIELFLMGF 247 (299)
Q Consensus 234 ~~----~~~~i~~fl~~~ 247 (299)
+. +.+.|.+||.+.
T Consensus 300 d~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 300 DENIEIVRRDILSWLNER 317 (330)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 54 677888999875
No 37
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=1.9e-24 Score=182.82 Aligned_cols=235 Identities=17% Similarity=0.162 Sum_probs=136.7
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcc
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFP-LLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~-~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
....|.++|+|+++|+||||.|+.+...... ....+.+++++.++++.++.++++|+||||||.+++.+|.++|++|++
T Consensus 124 ~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~ 203 (402)
T PLN02894 124 NFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQH 203 (402)
T ss_pred HHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcE
Confidence 4566778899999999999999753110000 011224667888888999999999999999999999999999999999
Q ss_pred eEEeccCCCCCchhHH---HHH--H----HHHHHH-----------Hhhcc-hhHHHHHHHhhhhhhcccCC-CCCCchH
Q 044899 92 LILVSPICKAPSWTEW---LYN--K----VLMNLL-----------YFYGM-CGVLKECLLQRYFSKEFRSG-EHGAESD 149 (299)
Q Consensus 92 lvl~~~~~~~~~~~~~---~~~--~----~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 149 (299)
+|++++.........+ ... . .+.... ...+. ...+........+....... ......+
T Consensus 204 lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 283 (402)
T PLN02894 204 LILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESK 283 (402)
T ss_pred EEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhh
Confidence 9999986543221111 100 0 000000 00000 00000011111111111000 0000011
Q ss_pred -HHHHHHHHHhcc-cchhHHHHHHHH--hhccchhhhhccCCcceEEEecCCCCCCc-hhHHHHHhhCCCceeEEEEcCC
Q 044899 150 -IIQACRRVLDQG-QSLNVMHFLQAI--NERHDLTKGLKELQCKTLIFVGESSPFHT-ESLHMSATMGSKNCGLVEVQAC 224 (299)
Q Consensus 150 -~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
..+.+....... .......+.... ....+....+.++++|+++|+|++|.+.+ ....+.+... ..+++++++++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~~~~~~~~~~~~-~~~~~~~i~~a 362 (402)
T PLN02894 284 LLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNYEGAVEARKRMK-VPCEIIRVPQG 362 (402)
T ss_pred HHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCcHHHHHHHHHcC-CCCcEEEeCCC
Confidence 111111111111 111111111111 12345566788899999999999998773 4444444443 25889999999
Q ss_pred CCcccccChHhHHHHHHHHHhhcC
Q 044899 225 GSLVTEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 225 gH~~~~e~p~~~~~~i~~fl~~~~ 248 (299)
||+++.|+|++|++.|.+|++...
T Consensus 363 GH~~~~E~P~~f~~~l~~~~~~~~ 386 (402)
T PLN02894 363 GHFVFLDNPSGFHSAVLYACRKYL 386 (402)
T ss_pred CCeeeccCHHHHHHHHHHHHHHhc
Confidence 999999999999999999998753
No 38
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.93 E-value=2.3e-24 Score=170.11 Aligned_cols=214 Identities=21% Similarity=0.272 Sum_probs=130.9
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 21 FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 21 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
|+|+++|+||+|.|+.........++.+++++++..+++.++.++++++||||||.+++.+|+++|++|+++|++++...
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~ 80 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPD 80 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSH
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeecc
Confidence 79999999999999830012255789999999999999999999999999999999999999999999999999999630
Q ss_pred CC------chhHHHHHHHHHHHHHh---hcchhHHHHHHH-hhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHH-
Q 044899 101 AP------SWTEWLYNKVLMNLLYF---YGMCGVLKECLL-QRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHF- 169 (299)
Q Consensus 101 ~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 169 (299)
.. ................. ............ .......... .......................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 81 LPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVE-----DFLKQFQSQQYARFAETDAFDNMF 155 (230)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----THHHHHHHHHHHHTCHHHHHHHHH
T ss_pred chhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCcccc-----chhhccchhhhhHHHHHHHHhhhc
Confidence 00 00000000000000000 000000000000 0000000000 00000001111110000111111
Q ss_pred --HHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHH
Q 044899 170 --LQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIE 241 (299)
Q Consensus 170 --~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 241 (299)
........+....+.++++|+++++|++|.+++ ....+.+.++ +.++++++++||+.+++.|+++++.|.
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIP--NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHST--TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcC--CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 112223345566788899999999999999993 4455666677 699999999999999999999999875
No 39
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.3e-23 Score=175.67 Aligned_cols=228 Identities=14% Similarity=0.182 Sum_probs=148.5
Q ss_pred hcCcEEEEECCCCCCCCCCC-------C---C-------CCCCCCCHHHHHHHHHHHHHHhCCCcEE-EEeeChhHHHHH
Q 044899 18 LHNFCIYHIDASGHELGADE-------I---Y-------SDFPLLNVDDLAEQVAEVLDFFGLEKVL-CLGVTAGAYILT 79 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~-------~---~-------~~~~~~~~~~~~~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~ 79 (299)
...|.||++|..|-|.|..| . + .+...+++.++++++.++++++++++++ ++||||||++++
T Consensus 97 t~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial 176 (389)
T PRK06765 97 TNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQ 176 (389)
T ss_pred CCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHH
Confidence 45899999999998764321 0 1 1234589999999999999999999986 999999999999
Q ss_pred HHHHhhhhhhcceEEeccCCCCCchh-HHHHHHHHHHHHHh---------------hcchhHHHHHH-----Hhhhhhhc
Q 044899 80 LFAMKYQERVLGLILVSPICKAPSWT-EWLYNKVLMNLLYF---------------YGMCGVLKECL-----LQRYFSKE 138 (299)
Q Consensus 80 ~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~~~~~~~-----~~~~~~~~ 138 (299)
.+|.++|++|+++|++++......+. .............. .++.... ... ...++...
T Consensus 177 ~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~-~~~~~~~~s~~~~~~~ 255 (389)
T PRK06765 177 EWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLAL-RMMTMNAFDEHFYETT 255 (389)
T ss_pred HHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHH-HHHHHHcCCHHHHHHH
Confidence 99999999999999999877665543 21111111111000 1111110 111 11122222
Q ss_pred ccCCCC-C-------CchHHHHHH-----HHHHhcccchhHHHHHHHHhh------ccchhhhhccCCcceEEEecCCCC
Q 044899 139 FRSGEH-G-------AESDIIQAC-----RRVLDQGQSLNVMHFLQAINE------RHDLTKGLKELQCKTLIFVGESSP 199 (299)
Q Consensus 139 ~~~~~~-~-------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~G~~D~ 199 (299)
+..... . ......+.+ .+.....+...+....+.+.. ..++.+.+.++++|+|+|+|++|.
T Consensus 256 f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~ 335 (389)
T PRK06765 256 FPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDL 335 (389)
T ss_pred cCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCC
Confidence 111100 0 000011121 122334455555555555522 125677899999999999999999
Q ss_pred CCc--hhHHHHHhhCC--CceeEEEEcC-CCCcccccChHhHHHHHHHHHhh
Q 044899 200 FHT--ESLHMSATMGS--KNCGLVEVQA-CGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 200 ~~~--~~~~~~~~~~~--~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
+++ ..+++.+.++. .+++++++++ +||+.++|+|+++++.|.+||++
T Consensus 336 l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 336 LQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 883 45567777753 2689999985 99999999999999999999975
No 40
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.93 E-value=6.7e-24 Score=179.53 Aligned_cols=219 Identities=17% Similarity=0.193 Sum_probs=138.0
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|..+...|.++|+|+++|+||||.|... ....+++++++++.++++.++.++++++||||||.+++.+|.++|+++
T Consensus 147 ~~~~~~~l~~~~~v~~~d~~g~G~s~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v 222 (371)
T PRK14875 147 WLFNHAALAAGRPVIALDLPGHGASSKA----VGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRV 222 (371)
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCCC----CCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchhe
Confidence 3445667778899999999999998532 235789999999999999999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc-chhHHH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ-SLNVMH 168 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 168 (299)
.++|++++............... .... ....+.. .+...+.... .................. ...+..
T Consensus 223 ~~lv~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (371)
T PRK14875 223 ASLTLIAPAGLGPEINGDYIDGF----VAAE-SRRELKP-VLELLFADPA-----LVTRQMVEDLLKYKRLDGVDDALRA 291 (371)
T ss_pred eEEEEECcCCcCcccchhHHHHh----hccc-chhHHHH-HHHHHhcChh-----hCCHHHHHHHHHHhccccHHHHHHH
Confidence 99999988643322111110000 0000 0000000 0111111000 001111111111111000 011111
Q ss_pred HHHHH----hhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHH
Q 044899 169 FLQAI----NERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 169 ~~~~~----~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
..... ....+....+.+++||+|+++|++|.+++.. ..+.+.. +.++.+++++||++++++|+++++.|.+||
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~--~~~~l~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 368 (371)
T PRK14875 292 LADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA--HAQGLPD-GVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368 (371)
T ss_pred HHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH--HHhhccC-CCeEEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 11111 1123445567889999999999999988522 1222332 688999999999999999999999999999
Q ss_pred hh
Q 044899 245 MG 246 (299)
Q Consensus 245 ~~ 246 (299)
++
T Consensus 369 ~~ 370 (371)
T PRK14875 369 GK 370 (371)
T ss_pred cc
Confidence 75
No 41
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=5.6e-24 Score=171.41 Aligned_cols=222 Identities=9% Similarity=0.058 Sum_probs=132.9
Q ss_pred cCHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEeeChhHHHHHHHHHhhh
Q 044899 9 FCPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG-LEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 9 ~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
.|..+...|. .||+|+++|+||||.|.... ...++++++++++.+++++++ .++++|+||||||++++.++.++|
T Consensus 33 ~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~---~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p 109 (273)
T PLN02211 33 CWYKIRCLMENSGYKVTCIDLKSAGIDQSDA---DSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFP 109 (273)
T ss_pred cHHHHHHHHHhCCCEEEEecccCCCCCCCCc---ccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhCh
Confidence 3455666665 59999999999999874321 224799999999999999985 579999999999999999999999
Q ss_pred hhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHH-HHHhh--hhhhcccCCCCCCchHHHHHHHHHHhcccc
Q 044899 87 ERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKE-CLLQR--YFSKEFRSGEHGAESDIIQACRRVLDQGQS 163 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
++|+++|++++........... . .. .+....... ..... .+.............+... ..+....+
T Consensus 110 ~~v~~lv~~~~~~~~~g~~~~~--~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 178 (273)
T PLN02211 110 KKICLAVYVAATMLKLGFQTDE--D-MK-----DGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRR---KILYQMSP 178 (273)
T ss_pred hheeEEEEeccccCCCCCCHHH--H-Hh-----ccccchhhhccceeeeeccCCCCCCceeeeCHHHHH---HHHhcCCC
Confidence 9999999998754322211110 0 00 000000000 00000 0000000000000001000 01111111
Q ss_pred hhHHHHHHHH--------hhccchhhhhccC-CcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccC
Q 044899 164 LNVMHFLQAI--------NERHDLTKGLKEL-QCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEY 232 (299)
Q Consensus 164 ~~~~~~~~~~--------~~~~~~~~~l~~i-~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 232 (299)
.......... ....+......++ ++|+++|.|++|..++ ..+.+.+.++ +.+++.++ +||.+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~--~~~~~~l~-~gH~p~ls~ 255 (273)
T PLN02211 179 QEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWP--PSQVYELE-SDHSPFFST 255 (273)
T ss_pred HHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCC--ccEEEEEC-CCCCccccC
Confidence 1111111110 0111222223445 7899999999999983 4556666666 56899996 899999999
Q ss_pred hHhHHHHHHHHHhhc
Q 044899 233 PLAMLIPIELFLMGF 247 (299)
Q Consensus 233 p~~~~~~i~~fl~~~ 247 (299)
|+++++.|.++....
T Consensus 256 P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 256 PFLLFGLLIKAAASV 270 (273)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 42
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.92 E-value=1.4e-24 Score=156.95 Aligned_cols=208 Identities=17% Similarity=0.165 Sum_probs=138.5
Q ss_pred HhhHhhhhc-CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 11 PDAASLLLH-NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 11 ~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
+++..+... .++|+++|.||+|.|.++.. .....-+..-+++..++++.|..+++.++|+|-||..|+..|+++++.|
T Consensus 61 pql~~l~k~l~~TivawDPpGYG~SrPP~R-kf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v 139 (277)
T KOG2984|consen 61 PQLLSLFKPLQVTIVAWDPPGYGTSRPPER-KFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKV 139 (277)
T ss_pred HHHHhcCCCCceEEEEECCCCCCCCCCCcc-cchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhh
Confidence 556665554 49999999999999975421 1122223344667778899999999999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHH-----HHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccch
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLK-----ECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSL 164 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (299)
.++|+.+............+ .++++... +.-+...++.+ .....+..+..
T Consensus 140 ~rmiiwga~ayvn~~~~ma~----------kgiRdv~kWs~r~R~P~e~~Yg~e----------~f~~~wa~wvD----- 194 (277)
T KOG2984|consen 140 NRMIIWGAAAYVNHLGAMAF----------KGIRDVNKWSARGRQPYEDHYGPE----------TFRTQWAAWVD----- 194 (277)
T ss_pred hhheeecccceecchhHHHH----------hchHHHhhhhhhhcchHHHhcCHH----------HHHHHHHHHHH-----
Confidence 99999998765543322211 12221110 00011111111 11122222211
Q ss_pred hHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHH
Q 044899 165 NVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIEL 242 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 242 (299)
....+.......-.+..+.+++||+|+++|++|+++ +.+..+....+ .++++++|.++|.+++..+++|+..+.+
T Consensus 195 -~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~--~a~~~~~peGkHn~hLrya~eFnklv~d 271 (277)
T KOG2984|consen 195 -VVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKS--LAKVEIHPEGKHNFHLRYAKEFNKLVLD 271 (277)
T ss_pred -HHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcc--cceEEEccCCCcceeeechHHHHHHHHH
Confidence 011111111111245678899999999999999999 45555555555 7999999999999999999999999999
Q ss_pred HHhhc
Q 044899 243 FLMGF 247 (299)
Q Consensus 243 fl~~~ 247 (299)
||++.
T Consensus 272 Fl~~~ 276 (277)
T KOG2984|consen 272 FLKST 276 (277)
T ss_pred HHhcc
Confidence 99863
No 43
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.92 E-value=9.7e-24 Score=170.71 Aligned_cols=229 Identities=14% Similarity=0.112 Sum_probs=142.1
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL----EKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
+..+...||.|+++|+||||.|.. .......++.++.+|+.++++.... .+++|+||||||.|++.++.+++..
T Consensus 54 a~~l~~~G~~V~~~D~RGhG~S~r--~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~ 131 (298)
T COG2267 54 ADDLAARGFDVYALDLRGHGRSPR--GQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPR 131 (298)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCC--CCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCcc
Confidence 344556799999999999999963 1223345699999999999998753 5899999999999999999999999
Q ss_pred hcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHh-cccchhHH
Q 044899 89 VLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLD-QGQSLNVM 167 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 167 (299)
|+++||.+|+......... .. ....................-............+++..+.+...-. ........
T Consensus 132 i~~~vLssP~~~l~~~~~~---~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~ 207 (298)
T COG2267 132 IDGLVLSSPALGLGGAILR---LI-LARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSR 207 (298)
T ss_pred ccEEEEECccccCChhHHH---HH-HHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHH
Confidence 9999999998876641100 00 0000000111111011111000001111111113444444443221 11111222
Q ss_pred HHHHHHhhcc-chhhhhccCCcceEEEecCCCCCCc---hhHHHHHhhCCCceeEEEEcCCCCcccccCh---HhHHHHH
Q 044899 168 HFLQAINERH-DLTKGLKELQCKTLIFVGESSPFHT---ESLHMSATMGSKNCGLVEVQACGSLVTEEYP---LAMLIPI 240 (299)
Q Consensus 168 ~~~~~~~~~~-~~~~~l~~i~~Pvl~i~G~~D~~~~---~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i 240 (299)
.+...+.... ........+++|+|+++|++|.+++ ...++.+....+++++.+++|+.|.++.|.. +++.+.+
T Consensus 208 w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~ 287 (298)
T COG2267 208 WVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDI 287 (298)
T ss_pred HHHHHHHhhcccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHH
Confidence 2222221111 2344566789999999999999885 3345556666667899999999998887744 5688999
Q ss_pred HHHHhhc
Q 044899 241 ELFLMGF 247 (299)
Q Consensus 241 ~~fl~~~ 247 (299)
.+|+.+.
T Consensus 288 ~~~l~~~ 294 (298)
T COG2267 288 LAWLAEA 294 (298)
T ss_pred HHHHHhh
Confidence 9999865
No 44
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.92 E-value=3.6e-24 Score=165.43 Aligned_cols=221 Identities=19% Similarity=0.126 Sum_probs=149.3
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC------CcEEEEeeChhHHHHHHHHHhhh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL------EKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
...+...||.|+++|++|||+|+.. ...-.+++.+++|+....+.... -+..++||||||.|++.++.++|
T Consensus 75 a~~l~~~g~~v~a~D~~GhG~SdGl---~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p 151 (313)
T KOG1455|consen 75 AKRLAKSGFAVYAIDYEGHGRSDGL---HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDP 151 (313)
T ss_pred HHHHHhCCCeEEEeeccCCCcCCCC---cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCC
Confidence 3445567999999999999999843 34456899999999999886432 37899999999999999999999
Q ss_pred hhhcceEEeccCCCCCchh--HHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcc--cCCCCCCchHHHHHHHHHHh-cc
Q 044899 87 ERVLGLILVSPICKAPSWT--EWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEF--RSGEHGAESDIIQACRRVLD-QG 161 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~ 161 (299)
+..+|+|+++|.+...... .+.....+.. + ..++.+|-.-.. .......+++....++..-. ..
T Consensus 152 ~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~-l----------~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~ 220 (313)
T KOG1455|consen 152 NFWDGAILVAPMCKISEDTKPHPPVISILTL-L----------SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYT 220 (313)
T ss_pred cccccceeeecccccCCccCCCcHHHHHHHH-H----------HHhCCceeecCCccccccccCCHHHHHHhhcCCceec
Confidence 9999999999987653221 1111111110 0 111111110000 00001113333333333211 11
Q ss_pred cchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccc----cChHh
Q 044899 162 QSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTE----EYPLA 235 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~ 235 (299)
..-.....++.+....++.+.+.++++|.+++||++|.++ ..++.+++...+.+.++..|||.-|.++. |+-+.
T Consensus 221 g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~ 300 (313)
T KOG1455|consen 221 GKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEI 300 (313)
T ss_pred CCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHH
Confidence 2223444455555557888899999999999999999998 36778888888889999999999997775 34455
Q ss_pred HHHHHHHHHhhc
Q 044899 236 MLIPIELFLMGF 247 (299)
Q Consensus 236 ~~~~i~~fl~~~ 247 (299)
|...|.+||++.
T Consensus 301 Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 301 VFGDIISWLDER 312 (313)
T ss_pred HHHHHHHHHHhc
Confidence 888899999763
No 45
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=5.3e-23 Score=172.74 Aligned_cols=222 Identities=14% Similarity=0.120 Sum_probs=134.7
Q ss_pred CHhhHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcEEEEeeChhHHHHHHHHHh
Q 044899 10 CPDAASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL----EKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 10 ~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
|..++..| ..||+|+++|+||||.|+... ....+++.+++|+.++++.+.. .+++++||||||.+++.++ .
T Consensus 152 ~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~---~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~ 227 (395)
T PLN02652 152 YLHFAKQLTSCGFGVYAMDWIGHGGSDGLH---GYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-S 227 (395)
T ss_pred HHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---CCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-h
Confidence 34455555 469999999999999996431 2345888999999999998753 3799999999999999876 4
Q ss_pred hhh---hhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhh-hhhcc-cCCCCCCchHH-HHHHHHHH
Q 044899 85 YQE---RVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRY-FSKEF-RSGEHGAESDI-IQACRRVL 158 (299)
Q Consensus 85 ~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~-~~~~~~~~ 158 (299)
+|+ +++++|+.+|........... ....... ......+ +.... .......+++. ...+...+
T Consensus 228 ~p~~~~~v~glVL~sP~l~~~~~~~~~--~~~~~l~----------~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~ 295 (395)
T PLN02652 228 YPSIEDKLEGIVLTSPALRVKPAHPIV--GAVAPIF----------SLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPL 295 (395)
T ss_pred ccCcccccceEEEECcccccccchHHH--HHHHHHH----------HHhCCCCcccCcccccCCcCCCHHHHHHHhcCCC
Confidence 554 899999999875433211111 0100000 0011110 00000 00000001111 11111000
Q ss_pred hcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCccccc-ChHh
Q 044899 159 DQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEE-YPLA 235 (299)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~ 235 (299)
..............+....+....+.++++|+|+++|++|.++ ..++.+++.+...+.+++++++++|.++.| ++++
T Consensus 296 ~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~ 375 (395)
T PLN02652 296 VYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREE 375 (395)
T ss_pred cccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHH
Confidence 0000001111111111112345667889999999999999999 356677777665568899999999998776 7899
Q ss_pred HHHHHHHHHhhc
Q 044899 236 MLIPIELFLMGF 247 (299)
Q Consensus 236 ~~~~i~~fl~~~ 247 (299)
+.+.+.+||+..
T Consensus 376 v~~~I~~FL~~~ 387 (395)
T PLN02652 376 VGRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
No 46
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.91 E-value=4e-22 Score=163.82 Aligned_cols=82 Identities=18% Similarity=0.213 Sum_probs=72.0
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEecc
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSP 97 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 97 (299)
..+|+|+++|+||||.|..+. ....++.+++++|+..+++++++++++++||||||.+++.++.++|++|+++|++++
T Consensus 51 ~~~~~vi~~D~~G~G~S~~~~--~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~ 128 (306)
T TIGR01249 51 PETYRIVLFDQRGCGKSTPHA--CLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGI 128 (306)
T ss_pred ccCCEEEEECCCCCCCCCCCC--CcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecc
Confidence 468999999999999997432 123468899999999999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 044899 98 ICKA 101 (299)
Q Consensus 98 ~~~~ 101 (299)
....
T Consensus 129 ~~~~ 132 (306)
T TIGR01249 129 FLLR 132 (306)
T ss_pred ccCC
Confidence 6543
No 47
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.90 E-value=6.7e-22 Score=145.60 Aligned_cols=213 Identities=16% Similarity=0.238 Sum_probs=144.5
Q ss_pred cccccccCHhhHh----hh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEeeChh
Q 044899 3 CFQGLFFCPDAAS----LL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF---GLEKVLCLGVTAG 74 (299)
Q Consensus 3 c~~~~~~~~~~~~----~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~G 74 (299)
|.|||..-+.-.. .| .+||.|.++.+||||.. +.+.-..+.++|.+++.+..++| +.+.|.++|.|||
T Consensus 20 llHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~----~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmG 95 (243)
T COG1647 20 LLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTL----PEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMG 95 (243)
T ss_pred EEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCC----HHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecch
Confidence 4556655443333 23 35999999999999966 33345678889888887776655 5779999999999
Q ss_pred HHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHH
Q 044899 75 AYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQAC 154 (299)
Q Consensus 75 g~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (299)
|.+++.+|..+| ++++|.++++.....+..... .++ .+... .+++-.+ +.+..+..
T Consensus 96 Gv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie-----~~l------~y~~~--~kk~e~k---------~~e~~~~e 151 (243)
T COG1647 96 GVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIE-----GLL------EYFRN--AKKYEGK---------DQEQIDKE 151 (243)
T ss_pred hHHHHHHHhhCC--ccceeeecCCcccccchhhhH-----HHH------HHHHH--hhhccCC---------CHHHHHHH
Confidence 999999999998 999999998876554433220 000 00000 0011000 23333333
Q ss_pred HHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccc-c
Q 044899 155 RRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTE-E 231 (299)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e 231 (299)
...+..........+...+ .+....+..|..|++++.|.+|.++ ..+..+.+.+.+...++.+++++||.... +
T Consensus 152 ~~~~~~~~~~~~~~~~~~i---~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~ 228 (243)
T COG1647 152 MKSYKDTPMTTTAQLKKLI---KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDK 228 (243)
T ss_pred HHHhhcchHHHHHHHHHHH---HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecch
Confidence 3333322223333333333 4456677889999999999999999 46777888887778999999999997766 4
Q ss_pred ChHhHHHHHHHHHhh
Q 044899 232 YPLAMLIPIELFLMG 246 (299)
Q Consensus 232 ~p~~~~~~i~~fl~~ 246 (299)
..+.+.+.+..||++
T Consensus 229 Erd~v~e~V~~FL~~ 243 (243)
T COG1647 229 ERDQVEEDVITFLEK 243 (243)
T ss_pred hHHHHHHHHHHHhhC
Confidence 667799999999973
No 48
>PLN02511 hydrolase
Probab=99.89 E-value=7.1e-22 Score=166.59 Aligned_cols=223 Identities=14% Similarity=0.094 Sum_probs=128.2
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC----CcEEEEeeChhHHHHHHHHHhhhhh-
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL----EKVLCLGVTAGAYILTLFAMKYQER- 88 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~- 88 (299)
..++.+||+|+++|+||||.|....+ .+....+++|+.+++++++. .+++++||||||.+++.++.++|++
T Consensus 123 ~~~~~~g~~vv~~d~rG~G~s~~~~~----~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~ 198 (388)
T PLN02511 123 LRARSKGWRVVVFNSRGCADSPVTTP----QFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENC 198 (388)
T ss_pred HHHHHCCCEEEEEecCCCCCCCCCCc----CEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCC
Confidence 34567899999999999999864311 22335667788888887765 5899999999999999999999987
Q ss_pred -hcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHH--hhhhhhcc--cCCCCCCchHHHHHHHHHHhcc--
Q 044899 89 -VLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLL--QRYFSKEF--RSGEHGAESDIIQACRRVLDQG-- 161 (299)
Q Consensus 89 -v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-- 161 (299)
|.++++++++.......... ...... .....+...+..... ...+.... ..............+.+.+...
T Consensus 199 ~v~~~v~is~p~~l~~~~~~~-~~~~~~-~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~ 276 (388)
T PLN02511 199 PLSGAVSLCNPFDLVIADEDF-HKGFNN-VYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSF 276 (388)
T ss_pred CceEEEEECCCcCHHHHHHHH-hccHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcC
Confidence 88888887654321111000 000000 000000000000000 00000000 0000000000011111111110
Q ss_pred cchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc-hh--HHHHHhhCCCceeEEEEcCCCCcccccChHh---
Q 044899 162 QSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT-ES--LHMSATMGSKNCGLVEVQACGSLVTEEYPLA--- 235 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~--~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~--- 235 (299)
.......++ .+.+....+++|++|+|+|+|++|++++ .. ....+.++ ++++++++++||+.++|+|+.
T Consensus 277 gf~~~~~yy----~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p--~~~l~~~~~gGH~~~~E~p~~~~~ 350 (388)
T PLN02511 277 GFKSVDAYY----SNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP--NCLLIVTPSGGHLGWVAGPEAPFG 350 (388)
T ss_pred CCCCHHHHH----HHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC--CEEEEECCCcceeccccCCCCCCC
Confidence 001111111 2244566788999999999999999984 22 22334444 799999999999999999876
Q ss_pred ---HHHHHHHHHhhcC
Q 044899 236 ---MLIPIELFLMGFG 248 (299)
Q Consensus 236 ---~~~~i~~fl~~~~ 248 (299)
+.+.+.+||+...
T Consensus 351 ~~w~~~~i~~Fl~~~~ 366 (388)
T PLN02511 351 APWTDPVVMEFLEALE 366 (388)
T ss_pred CccHHHHHHHHHHHHH
Confidence 4899999998764
No 49
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.88 E-value=1.4e-21 Score=161.58 Aligned_cols=219 Identities=13% Similarity=0.118 Sum_probs=128.7
Q ss_pred hHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------------------------CCcEE
Q 044899 13 AASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG------------------------LEKVL 67 (299)
Q Consensus 13 ~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~------------------------~~~~~ 67 (299)
+++.| .+||+|+++|+||||+|...........+++++++|+.++++.+. ..|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 34444 679999999999999987432111122489999999999998642 24799
Q ss_pred EEeeChhHHHHHHHHHhhhh--------hhcceEEeccCCCCCch-------hHHHHHHHHHHHHHhhcchhHHHHHHHh
Q 044899 68 CLGVTAGAYILTLFAMKYQE--------RVLGLILVSPICKAPSW-------TEWLYNKVLMNLLYFYGMCGVLKECLLQ 132 (299)
Q Consensus 68 lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (299)
|+||||||.+++.++.++++ .++++|+++|....... ...... .+...+.. +..
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~-~l~~~~~~----------~~p 214 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYL-PVMNFMSR----------VFP 214 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHH-HHHHHHHH----------HCC
Confidence 99999999999999987643 58999988886532110 011100 01111000 000
Q ss_pred hh-hhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhh-ccchhhhhccC--CcceEEEecCCCCCC--chhHH
Q 044899 133 RY-FSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINE-RHDLTKGLKEL--QCKTLIFVGESSPFH--TESLH 206 (299)
Q Consensus 133 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~i--~~Pvl~i~G~~D~~~--~~~~~ 206 (299)
.. +... .....++...+.+...-..........+...+.. .......+..+ ++|+|+|+|++|.++ ..+..
T Consensus 215 ~~~~~~~---~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 215 TFRISKK---IRYEKSPYVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred cccccCc---cccccChhhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 00 0000 0000012222222211100100111111111111 11223344555 799999999999998 35556
Q ss_pred HHHhhCCCceeEEEEcCCCCcccccC-hHhHHHHHHHHHh
Q 044899 207 MSATMGSKNCGLVEVQACGSLVTEEY-PLAMLIPIELFLM 245 (299)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~ 245 (299)
+.+.+...+.+++++++++|.++.|. .+++.+.|.+||+
T Consensus 292 ~~~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 292 FYNKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred HHHhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHHhh
Confidence 66666555789999999999999875 6889999999985
No 50
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.88 E-value=2.4e-21 Score=156.31 Aligned_cols=211 Identities=16% Similarity=0.167 Sum_probs=125.4
Q ss_pred hhHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCcEEEEeeChhHHHHHHHHHhh
Q 044899 12 DAASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF-----GLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 12 ~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+++.+ .+||+|+++|+||||.|... ..+++++.+|+.++++.+ +.++++++||||||.+++.+|..
T Consensus 48 ~la~~l~~~G~~v~~~Dl~G~G~S~~~------~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~- 120 (274)
T TIGR03100 48 LLARRLAEAGFPVLRFDYRGMGDSEGE------NLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA- 120 (274)
T ss_pred HHHHHHHHCCCEEEEeCCCCCCCCCCC------CCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-
Confidence 344555 46999999999999998531 246778888888888876 55789999999999999999765
Q ss_pred hhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcc-cch
Q 044899 86 QERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQG-QSL 164 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 164 (299)
+++|+++|+++|........... ............ .......+...+ ......+.+...+... ...
T Consensus 121 ~~~v~~lil~~p~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~~~~~g~~------~~~~~~~~~~~~~~~~~~~~ 187 (274)
T TIGR03100 121 DLRVAGLVLLNPWVRTEAAQAAS---RIRHYYLGQLLS----ADFWRKLLSGEV------NLGSSLRGLGDALLKARQKG 187 (274)
T ss_pred CCCccEEEEECCccCCcccchHH---HHHHHHHHHHhC----hHHHHHhcCCCc------cHHHHHHHHHHHHHhhhhcC
Confidence 46899999999875432211110 000000000000 000011111110 0111122222211000 000
Q ss_pred hHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchh-------HHHHHhhCCCceeEEEEcCCCCcccccC-hHhH
Q 044899 165 NVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTES-------LHMSATMGSKNCGLVEVQACGSLVTEEY-PLAM 236 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~-------~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p~~~ 236 (299)
...... . ...+....+..+++|+++++|+.|...+.. ....+.+..++++++.+++++|++..+. ++++
T Consensus 188 ~~~~~~-~--~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v 264 (274)
T TIGR03100 188 DEVAHG-G--LAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWV 264 (274)
T ss_pred CCcccc-h--HHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHH
Confidence 000000 0 123445667788999999999999876322 2333435434899999999999885554 4889
Q ss_pred HHHHHHHHh
Q 044899 237 LIPIELFLM 245 (299)
Q Consensus 237 ~~~i~~fl~ 245 (299)
.+.|.+||+
T Consensus 265 ~~~i~~wL~ 273 (274)
T TIGR03100 265 AARTTEWLR 273 (274)
T ss_pred HHHHHHHHh
Confidence 999999996
No 51
>PRK05855 short chain dehydrogenase; Validated
Probab=99.88 E-value=1.2e-21 Score=175.45 Aligned_cols=228 Identities=14% Similarity=0.066 Sum_probs=126.3
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCc-EEEEeeChhHHHHHHHHHh--hh
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEK-VLCLGVTAGAYILTLFAMK--YQ 86 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~--~p 86 (299)
|..+.+.|.++|+|+++|+||||.|+.+.. ...++++++++|+.+++++++.++ ++|+||||||.+++.++.+ ++
T Consensus 41 w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~--~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~ 118 (582)
T PRK05855 41 WDGVAPLLADRFRVVAYDVRGAGRSSAPKR--TAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAA 118 (582)
T ss_pred HHHHHHHhhcceEEEEecCCCCCCCCCCCc--ccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccch
Confidence 455677788899999999999999975322 336899999999999999998765 9999999999999988866 35
Q ss_pred hhhcceEEeccCCCCCchhHHHHH-------HHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHh
Q 044899 87 ERVLGLILVSPICKAPSWTEWLYN-------KVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLD 159 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (299)
+++..++.+++... .....+... .......... .............+........ .............
T Consensus 119 ~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 193 (582)
T PRK05855 119 GRIASFTSVSGPSL-DHVGFWLRSGLRRPTPRRLARALGQL-LRSWYIYLFHLPVLPELLWRLG---LGRAWPRLLRRVE 193 (582)
T ss_pred hhhhhheeccCCch-HHHHHHHhhcccccchhhhhHHHHHH-hhhHHHHHHhCCCCcHHHhccc---hhhHHHHhhhhcc
Confidence 56666555543221 000000000 0000000000 0000000000000000000000 0000000000000
Q ss_pred cc-------------cchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCC
Q 044899 160 QG-------------QSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQAC 224 (299)
Q Consensus 160 ~~-------------~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
.. .......+.... ........+..+++|+++|+|++|.+++ ....+.+.++ +.++++++ +
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~--~~~~~~~~-~ 269 (582)
T PRK05855 194 GTPVDPIPTQTTLSDGAHGVKLYRANM-IRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVP--RLWRREIK-A 269 (582)
T ss_pred CCCcchhhhhhhhccccchHHHHHhhh-hhhhccCccCCccCceEEEEeCCCcccCHHHhccccccCC--cceEEEcc-C
Confidence 00 000011111111 0111122345689999999999999984 3334444444 56777776 7
Q ss_pred CCcccccChHhHHHHHHHHHhhcC
Q 044899 225 GSLVTEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 225 gH~~~~e~p~~~~~~i~~fl~~~~ 248 (299)
||++++|+|+++++.|.+|+.+..
T Consensus 270 gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 270 GHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred CCcchhhChhHHHHHHHHHHHhcc
Confidence 999999999999999999998754
No 52
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.87 E-value=3.2e-20 Score=146.05 Aligned_cols=225 Identities=18% Similarity=0.153 Sum_probs=141.5
Q ss_pred ccCHhhHhhhhc--CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCcEEEEeeChhH-HHHHH
Q 044899 8 FFCPDAASLLLH--NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG----LEKVLCLGVTAGA-YILTL 80 (299)
Q Consensus 8 ~~~~~~~~~l~~--~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg-~ia~~ 80 (299)
-+|..+...|+. +-.|+++|.|.||.|.. ....+...+++|+..+++..+ ..+++++|||||| .+++.
T Consensus 66 ~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~-----~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~ 140 (315)
T KOG2382|consen 66 ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPK-----ITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMA 140 (315)
T ss_pred CCHHHHHHHhcccccCceEEEecccCCCCcc-----ccccCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHH
Confidence 346666666665 67999999999999854 335679999999999999885 5689999999999 88888
Q ss_pred HHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcch--hHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHH
Q 044899 81 FAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMC--GVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVL 158 (299)
Q Consensus 81 ~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
.+..+|+.+..+|+++-.+..-.............+....... ..-.....+.+..-.. +..+.+.+...+
T Consensus 141 ~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~-------d~~~~~fi~~nl 213 (315)
T KOG2382|consen 141 ETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGF-------DNLVRQFILTNL 213 (315)
T ss_pred HHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhc-------chHHHHHHHHhc
Confidence 8889999999999998766422111111111111111110000 0000111111111000 112222222222
Q ss_pred hc----------ccchhHHHHHHHHhhccchhhhh--ccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCC
Q 044899 159 DQ----------GQSLNVMHFLQAINERHDLTKGL--KELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQAC 224 (299)
Q Consensus 159 ~~----------~~~~~~~~~~~~~~~~~~~~~~l--~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~ 224 (299)
.. .+.......+..+. ...++..+ .....|||++.|.++.+++ ....+...++ .+++++++++
T Consensus 214 ~~~~~~~s~~w~~nl~~i~~~~~~~~-~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp--~~e~~~ld~a 290 (315)
T KOG2382|consen 214 KKSPSDGSFLWRVNLDSIASLLDEYE-ILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFP--NVEVHELDEA 290 (315)
T ss_pred CcCCCCCceEEEeCHHHHHHHHHHHH-hhcccccccccccccceeEEecCCCCCcChhHHHHHHHhcc--chheeecccC
Confidence 21 01222333333321 22333333 5678999999999999993 3456666666 7999999999
Q ss_pred CCcccccChHhHHHHHHHHHhhc
Q 044899 225 GSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 225 gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
||+.+.|+|+++.+.|.+|+...
T Consensus 291 GHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 291 GHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred CceeecCCHHHHHHHHHHHhccc
Confidence 99999999999999999998753
No 53
>PRK10985 putative hydrolase; Provisional
Probab=99.86 E-value=5.5e-20 Score=152.12 Aligned_cols=222 Identities=11% Similarity=0.055 Sum_probs=121.1
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh--hcc
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER--VLG 91 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~ 91 (299)
..+...||+|+++|+||||.+....+........+++...+..+.+.++..+++++||||||.+++.++.++++. +.+
T Consensus 81 ~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~ 160 (324)
T PRK10985 81 EAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDA 160 (324)
T ss_pred HHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccE
Confidence 345567999999999999977432111111122344444444444556777999999999999999888887654 889
Q ss_pred eEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHH---HHhhhhhhcccCCCCCCchHHHH------HHHHHHhccc
Q 044899 92 LILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKEC---LLQRYFSKEFRSGEHGAESDIIQ------ACRRVLDQGQ 162 (299)
Q Consensus 92 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 162 (299)
+|+++++.......... ........ ...+...+... ....+.... ..+.+... .+.+.+. ..
T Consensus 161 ~v~i~~p~~~~~~~~~~-~~~~~~~~-~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~fd~~~~-~~ 231 (324)
T PRK10985 161 AVIVSAPLMLEACSYRM-EQGFSRVY-QRYLLNLLKANAARKLAAYPGTL------PINLAQLKSVRRLREFDDLIT-AR 231 (324)
T ss_pred EEEEcCCCCHHHHHHHH-hhhHHHHH-HHHHHHHHHHHHHHHHHhccccc------cCCHHHHhcCCcHHHHhhhhe-ec
Confidence 99998865432211111 01100000 00000001010 011111100 00111111 1111111 11
Q ss_pred chhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccCh-----Hh
Q 044899 163 SLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYP-----LA 235 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-----~~ 235 (299)
...+......+ ...+....++++++|+++|+|++|++++ ....+.+..+ +.++++++++||+.++|.. ..
T Consensus 232 ~~g~~~~~~~y-~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~GH~~~~~g~~~~~~~w 308 (324)
T PRK10985 232 IHGFADAIDYY-RQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP--NVEYQLTEHGGHVGFVGGTLLKPQMW 308 (324)
T ss_pred cCCCCCHHHHH-HHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC--CeEEEECCCCCceeeCCCCCCCCCcc
Confidence 11111112222 1234567788999999999999999883 2333433333 7889999999999998742 34
Q ss_pred HHHHHHHHHhhc
Q 044899 236 MLIPIELFLMGF 247 (299)
Q Consensus 236 ~~~~i~~fl~~~ 247 (299)
..+.+.+|++..
T Consensus 309 ~~~~~~~~~~~~ 320 (324)
T PRK10985 309 LEQRIPDWLTTY 320 (324)
T ss_pred HHHHHHHHHHHh
Confidence 677888888654
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.84 E-value=4.9e-19 Score=148.15 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=127.4
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHH-H----HHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQ-V----AEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~d-l----~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
+..+..+||+|+++|++|+|.|.. ..++++++.+ + ..+.+..+.++++++||||||.+++.+++.+|+
T Consensus 87 ~~~L~~~G~~V~~~D~~g~g~s~~-------~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~ 159 (350)
T TIGR01836 87 VRGLLERGQDVYLIDWGYPDRADR-------YLTLDDYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPD 159 (350)
T ss_pred HHHHHHCCCeEEEEeCCCCCHHHh-------cCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCch
Confidence 344556799999999999997742 3466666543 4 345555677899999999999999999999999
Q ss_pred hhcceEEeccCCCCCchhHHHH--HH--HHHHHHHhhc-chhHHHHH----------HHhhhhhhcccCCCCCCchHHHH
Q 044899 88 RVLGLILVSPICKAPSWTEWLY--NK--VLMNLLYFYG-MCGVLKEC----------LLQRYFSKEFRSGEHGAESDIIQ 152 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~~~~~~--~~--~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
+|+++|++++............ .. .........+ +....... ....+...... ..+++...
T Consensus 160 ~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~----~~~~~~~~ 235 (350)
T TIGR01836 160 KIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDI----LEDERKVE 235 (350)
T ss_pred heeeEEEeccccccCCCCchhhhhccccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHh----cCChHHHH
Confidence 9999999998765422111000 00 0000011001 00000000 00001000000 00222222
Q ss_pred HHH---HHHhcc---cchhHHHHHHHHhhccc----------hhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCC
Q 044899 153 ACR---RVLDQG---QSLNVMHFLQAINERHD----------LTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSK 214 (299)
Q Consensus 153 ~~~---~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~ 214 (299)
.+. .+.... ....+..+.+.+..... ....+.++++|+++++|++|.+++ .+..+.+.++..
T Consensus 236 ~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~ 315 (350)
T TIGR01836 236 NFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLINGEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSE 315 (350)
T ss_pred HHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccCCeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCC
Confidence 222 111111 11122222222211111 123477889999999999999883 556677777655
Q ss_pred ceeEEEEcCCCCcccccC---hHhHHHHHHHHHhh
Q 044899 215 NCGLVEVQACGSLVTEEY---PLAMLIPIELFLMG 246 (299)
Q Consensus 215 ~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~~ 246 (299)
..++++++ +||+..+.. ++++...|.+||++
T Consensus 316 ~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 316 DYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred CeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHh
Confidence 57778887 799887754 47799999999975
No 55
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.82 E-value=1.2e-18 Score=147.63 Aligned_cols=189 Identities=14% Similarity=0.094 Sum_probs=116.1
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhhhhhhcc
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
.+...||+|+++|+||||.|.... ...+......++.+.+... +.+++.++||||||.+++.+|..+|++|++
T Consensus 217 ~La~~Gy~vl~~D~pG~G~s~~~~----~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a 292 (414)
T PRK05077 217 YLAPRGIAMLTIDMPSVGFSSKWK----LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKA 292 (414)
T ss_pred HHHhCCCEEEEECCCCCCCCCCCC----ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceE
Confidence 345679999999999999985421 1234444555666666554 457899999999999999999999999999
Q ss_pred eEEeccCCCCC-chhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHH
Q 044899 92 LILVSPICKAP-SWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFL 170 (299)
Q Consensus 92 lvl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (299)
+|++++..... ....+. . .......+.+. ..+.... . ..+ .+... +
T Consensus 293 ~V~~~~~~~~~~~~~~~~--~---------~~p~~~~~~la-~~lg~~~-----~-~~~---~l~~~------------l 339 (414)
T PRK05077 293 VACLGPVVHTLLTDPKRQ--Q---------QVPEMYLDVLA-SRLGMHD-----A-SDE---ALRVE------------L 339 (414)
T ss_pred EEEECCccchhhcchhhh--h---------hchHHHHHHHH-HHhCCCC-----C-ChH---HHHHH------------h
Confidence 99999875311 000000 0 00000001000 0011000 0 011 11111 0
Q ss_pred HHHhhccchhhhh-ccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 171 QAINERHDLTKGL-KELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 171 ~~~~~~~~~~~~l-~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
..+. ......+ .++++|+|+|+|++|.++| .++.+.+..+ +.+++++|++ ++.+.++++.+.+.+||++.
T Consensus 340 ~~~s--l~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~--~~~l~~i~~~---~~~e~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 340 NRYS--LKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA--DGKLLEIPFK---PVYRNFDKALQEISDWLEDR 412 (414)
T ss_pred hhcc--chhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC--CCeEEEccCC---CccCCHHHHHHHHHHHHHHH
Confidence 1000 0000111 4789999999999999984 4444555555 7899999976 45689999999999999764
No 56
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.81 E-value=2.1e-18 Score=148.46 Aligned_cols=214 Identities=11% Similarity=0.103 Sum_probs=123.2
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHH----HHHHhh-hh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILT----LFAMKY-QE 87 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~----~~a~~~-p~ 87 (299)
+..++.+||+|+++|++|+|.+..... ...|..+.+.+.+..+++.++.++++++||||||.++. .+++.+ ++
T Consensus 213 v~~L~~qGf~V~~iDwrgpg~s~~~~~--~ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~ 290 (532)
T TIGR01838 213 VRWLVEQGHTVFVISWRNPDASQADKT--FDDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDK 290 (532)
T ss_pred HHHHHHCCcEEEEEECCCCCcccccCC--hhhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCC
Confidence 444556899999999999998854322 22455566777788888888999999999999999852 245555 78
Q ss_pred hhcceEEeccCCCCCchhHH--HH-HH---HHHHHHHhhcc-hhH-HH---------HHHHhhhhhhcccCCCCCCchHH
Q 044899 88 RVLGLILVSPICKAPSWTEW--LY-NK---VLMNLLYFYGM-CGV-LK---------ECLLQRYFSKEFRSGEHGAESDI 150 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~~~~--~~-~~---~~~~~~~~~~~-~~~-~~---------~~~~~~~~~~~~~~~~~~~~~~~ 150 (299)
+|++++++++.......... +. .. .+.......|. ... +. +.....++....... .+..
T Consensus 291 rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~----~~~~ 366 (532)
T TIGR01838 291 RIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGK----SPVP 366 (532)
T ss_pred ccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCC----Cccc
Confidence 89999999987654322111 00 00 01111111110 000 00 000111111111100 0000
Q ss_pred HHHHHHHHh---cccchhHHHHHHHHhhc----------cchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCc
Q 044899 151 IQACRRVLD---QGQSLNVMHFLQAINER----------HDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKN 215 (299)
Q Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~~~~~~----------~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~ 215 (299)
..+..+.. ......+..+++.+... .+....+.+|++|+++|+|++|.+++ .+..+.+.++ +
T Consensus 367 -fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~--~ 443 (532)
T TIGR01838 367 -FDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLG--G 443 (532)
T ss_pred -hhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCC--C
Confidence 11111111 11222333333333222 22345688899999999999999993 4556666666 6
Q ss_pred eeEEEEcCCCCcccccChHh
Q 044899 216 CGLVEVQACGSLVTEEYPLA 235 (299)
Q Consensus 216 ~~~~~~~~~gH~~~~e~p~~ 235 (299)
.+.++++++||..++++|..
T Consensus 444 ~~~~vL~~sGHi~~ienPp~ 463 (532)
T TIGR01838 444 PKTFVLGESGHIAGVVNPPS 463 (532)
T ss_pred CEEEEECCCCCchHhhCCCC
Confidence 77889999999999987753
No 57
>PRK13604 luxD acyl transferase; Provisional
Probab=99.78 E-value=5.3e-18 Score=135.04 Aligned_cols=194 Identities=14% Similarity=0.171 Sum_probs=113.0
Q ss_pred HhhHhhh-hcCcEEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhh
Q 044899 11 PDAASLL-LHNFCIYHIDASGH-ELGADEIYSDFPLLNVDDLAEQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 11 ~~~~~~l-~~~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..++..| .+||.|+.+|.||| |+|+.. ....++....+|+.++++.+ +.+++.|+||||||.+|+..|...
T Consensus 54 ~~~A~~La~~G~~vLrfD~rg~~GeS~G~----~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGgava~~~A~~~ 129 (307)
T PRK13604 54 AGLAEYLSSNGFHVIRYDSLHHVGLSSGT----IDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSARIAYEVINEI 129 (307)
T ss_pred HHHHHHHHHCCCEEEEecCCCCCCCCCCc----cccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHHHHHHHHhcCC
Confidence 3445545 56999999999998 888543 22334444567776666554 456899999999999997777643
Q ss_pred hhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchh
Q 044899 86 QERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLN 165 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
.++++|+.+|.......... . +.. ... .+.... .++..+. ... .-.
T Consensus 130 --~v~~lI~~sp~~~l~d~l~~----~----~~~---------~~~--~~p~~~-------lp~~~d~-----~g~-~l~ 175 (307)
T PRK13604 130 --DLSFLITAVGVVNLRDTLER----A----LGY---------DYL--SLPIDE-------LPEDLDF-----EGH-NLG 175 (307)
T ss_pred --CCCEEEEcCCcccHHHHHHH----h----hhc---------ccc--cCcccc-------ccccccc-----ccc-ccc
Confidence 39999999987653311110 0 000 000 000000 0000000 000 000
Q ss_pred HHHHHHHHh-----hccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHH
Q 044899 166 VMHFLQAIN-----ERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLI 238 (299)
Q Consensus 166 ~~~~~~~~~-----~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~ 238 (299)
...+++... ......+.++++++|+|+|||++|.++ ..++.+.+.+...+.++++++|++|.+. |++ .
T Consensus 176 ~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~-~~~----~ 250 (307)
T PRK13604 176 SEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG-ENL----V 250 (307)
T ss_pred HHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC-cch----H
Confidence 000111100 001223456678899999999999999 4677888877655799999999999665 555 3
Q ss_pred HHHHHHhhc
Q 044899 239 PIELFLMGF 247 (299)
Q Consensus 239 ~i~~fl~~~ 247 (299)
.++.|.++.
T Consensus 251 ~~~~~~~~~ 259 (307)
T PRK13604 251 VLRNFYQSV 259 (307)
T ss_pred HHHHHHHHH
Confidence 445555543
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.76 E-value=3e-17 Score=131.71 Aligned_cols=216 Identities=21% Similarity=0.290 Sum_probs=122.9
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 21 FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 21 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
|+|+++|+||||.|. . . .+....+++++..+++.++..+++++||||||.+++.++.++|++++++|++++...
T Consensus 51 ~~~~~~d~~g~g~s~-~----~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 51 YRVIAPDLRGHGRSD-P----A-GYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred eEEEEecccCCCCCC-c----c-cccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCC
Confidence 999999999999986 1 1 345666699999999999999999999999999999999999999999999997654
Q ss_pred CCchh--H----H-HHHHHHHHHHHhhcchhHHHHHHHhh-hhhhcccC----CCCCCchHHHHHHHHHHhcccchhHHH
Q 044899 101 APSWT--E----W-LYNKVLMNLLYFYGMCGVLKECLLQR-YFSKEFRS----GEHGAESDIIQACRRVLDQGQSLNVMH 168 (299)
Q Consensus 101 ~~~~~--~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
..... . . .............. ........... +....... ...........................
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (282)
T COG0596 125 PGLLEAALRQPAGAAPLAALADLLLGLD-AAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAA 203 (282)
T ss_pred cccccCccccCccccchhhhhhhhhccc-hhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccch
Confidence 11000 0 0 00000000000000 00000000000 00000000 000000000011110000000000011
Q ss_pred HHHHHhhccchhhhhccCCcceEEEecCCCCCCch--hHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 169 FLQAINERHDLTKGLKELQCKTLIFVGESSPFHTE--SLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 169 ~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
....... ......+..+++|+++++|++|.+.+. ...+.+.++. ..++++++++||+++.++|+.+++.+.+|+.
T Consensus 204 ~~~~~~~-~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 204 ALLALLD-RDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPN-DARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred hhhcccc-cccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCC-CceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 1111100 123445677889999999999955543 3444445552 4889999999999999999999999888543
No 59
>PLN02872 triacylglycerol lipase
Probab=99.75 E-value=6.6e-17 Score=135.53 Aligned_cols=225 Identities=16% Similarity=0.142 Sum_probs=126.9
Q ss_pred hhhcCcEEEEECCCCCCCCCCCC-----CCCCCCCCHHHHH-HHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 16 LLLHNFCIYHIDASGHELGADEI-----YSDFPLLNVDDLA-EQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~-----~~~~~~~~~~~~~-~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+..+||+|+++|+||+|.|.... ....-.+++++++ .|+.++++.+ ..++++++||||||.+++.++ .+|
T Consensus 103 La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~~v~~VGhS~Gg~~~~~~~-~~p 181 (395)
T PLN02872 103 LADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNSKIFIVGHSQGTIMSLAAL-TQP 181 (395)
T ss_pred HHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCCceEEEEECHHHHHHHHHh-hCh
Confidence 34569999999999987653211 1111247898988 7999999986 347999999999999998555 567
Q ss_pred h---hhcceEEeccCCCCCchhHHHH----HHHHHHHHHhhcchhHH-----HHHHHh--------------hhhhhccc
Q 044899 87 E---RVLGLILVSPICKAPSWTEWLY----NKVLMNLLYFYGMCGVL-----KECLLQ--------------RYFSKEFR 140 (299)
Q Consensus 87 ~---~v~~lvl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-----~~~~~~--------------~~~~~~~~ 140 (299)
+ +|+.+++++|............ .......+...+..++. ...+.. .+.+.. .
T Consensus 182 ~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~-~ 260 (395)
T PLN02872 182 NVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTN-C 260 (395)
T ss_pred HHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCC-c
Confidence 6 6889999998765422211111 00111111111111110 000000 011100 0
Q ss_pred CCCCCCchHHHHHHHHHHh-cccchhHHHHHHHHh-------------------hccchhhhhccC--CcceEEEecCCC
Q 044899 141 SGEHGAESDIIQACRRVLD-QGQSLNVMHFLQAIN-------------------ERHDLTKGLKEL--QCKTLIFVGESS 198 (299)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-------------------~~~~~~~~l~~i--~~Pvl~i~G~~D 198 (299)
..+......+..... ....+.+..+...+. ......-.+.++ ++|+++++|++|
T Consensus 261 ----~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D 336 (395)
T PLN02872 261 ----CFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTD 336 (395)
T ss_pred ----ccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCC
Confidence 001111111111100 001111222222211 111112246667 589999999999
Q ss_pred CCC--chhHHHHHhhCCCceeEEEEcCCCCc---ccccChHhHHHHHHHHHhhc
Q 044899 199 PFH--TESLHMSATMGSKNCGLVEVQACGSL---VTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 199 ~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~---~~~e~p~~~~~~i~~fl~~~ 247 (299)
.++ .....+.+.++. ..+++.++++||. ...+.++++.+.|.+|+++.
T Consensus 337 ~lv~~~dv~~l~~~Lp~-~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 337 GLADVTDVEHTLAELPS-KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred CCCCHHHHHHHHHHCCC-ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 998 355677777774 3678889999995 44588999999999999853
No 60
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=9.1e-16 Score=122.81 Aligned_cols=228 Identities=15% Similarity=0.165 Sum_probs=148.6
Q ss_pred hcCcEEEEECCCCCC-CCCCCCCC---------CCCCCCHHHHHHHHHHHHHHhCCCcEE-EEeeChhHHHHHHHHHhhh
Q 044899 18 LHNFCIYHIDASGHE-LGADEIYS---------DFPLLNVDDLAEQVAEVLDFFGLEKVL-CLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G-~S~~~~~~---------~~~~~~~~~~~~dl~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p 86 (299)
.+.|.||+.|..|.+ .|..|... ....+++.|+++.-..++++||++++. +||-||||+.+++++..||
T Consensus 90 t~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yP 169 (368)
T COG2021 90 TERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYP 169 (368)
T ss_pred ccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhCh
Confidence 357999999999976 45444221 224578999999999999999999986 9999999999999999999
Q ss_pred hhhcceEEeccCCCCCchhHHHHHHHHHHHHH-----------------------hhcchhHHHHHHHhhhhhhcccCCC
Q 044899 87 ERVLGLILVSPICKAPSWTEWLYNKVLMNLLY-----------------------FYGMCGVLKECLLQRYFSKEFRSGE 143 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (299)
++|+++|.+++......+...+.......... ..++.....+..+.+.|........
T Consensus 170 d~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~ 249 (368)
T COG2021 170 DRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADP 249 (368)
T ss_pred HHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccc
Confidence 99999999998776554432221111111100 0000001111122233333211111
Q ss_pred CCC--chHHHHHHHH-----HHhcccchhHHHHHHHHhh------ccchhhhhccCCcceEEEecCCCCCCc--hhHHHH
Q 044899 144 HGA--ESDIIQACRR-----VLDQGQSLNVMHFLQAINE------RHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMS 208 (299)
Q Consensus 144 ~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~ 208 (299)
... ....++.+.+ ...+.+...+....+++.. +.++...++++++|+|++.-+.|...| ..++..
T Consensus 250 ~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~ 329 (368)
T COG2021 250 LRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALA 329 (368)
T ss_pred cCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHH
Confidence 110 1122233322 3345566677766666631 244556699999999999999999984 556777
Q ss_pred HhhCCCceeEEEE-cCCCCcccccChHhHHHHHHHHHhh
Q 044899 209 ATMGSKNCGLVEV-QACGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 209 ~~~~~~~~~~~~~-~~~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
+.++..++ ++++ ...||..++...+.+...|..||+.
T Consensus 330 ~~L~~~~~-~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 330 EALPAAGA-LREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HhccccCc-eEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 77775444 6555 4589999999999999999999974
No 61
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.73 E-value=4.5e-17 Score=126.88 Aligned_cols=187 Identities=13% Similarity=0.099 Sum_probs=109.3
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C--CCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----G--LEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
+.++||.|+.+|+||.+..............-....+|+.+.++.+ . .+++.++|+|+||.+++.++.++|+++
T Consensus 10 la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f 89 (213)
T PF00326_consen 10 LASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRF 89 (213)
T ss_dssp HHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGS
T ss_pred HHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceee
Confidence 4478999999999998743211000001111122344555444443 2 358999999999999999999999999
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHF 169 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (299)
+++|..++........... .. +. ......+-... . .++.. ..
T Consensus 90 ~a~v~~~g~~d~~~~~~~~------------~~--~~-~~~~~~~~~~~-~------~~~~~----------------~~ 131 (213)
T PF00326_consen 90 KAAVAGAGVSDLFSYYGTT------------DI--YT-KAEYLEYGDPW-D------NPEFY----------------RE 131 (213)
T ss_dssp SEEEEESE-SSTTCSBHHT------------CC--HH-HGHHHHHSSTT-T------SHHHH----------------HH
T ss_pred eeeeccceecchhcccccc------------cc--cc-cccccccCccc-h------hhhhh----------------hh
Confidence 9999999876543322110 00 00 00000000000 0 00000 00
Q ss_pred HHHHhhccchhhhhcc--CCcceEEEecCCCCCC--chhHHHHHhhCCC--ceeEEEEcCCCCccc-ccChHhHHHHHHH
Q 044899 170 LQAINERHDLTKGLKE--LQCKTLIFVGESSPFH--TESLHMSATMGSK--NCGLVEVQACGSLVT-EEYPLAMLIPIEL 242 (299)
Q Consensus 170 ~~~~~~~~~~~~~l~~--i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~-~e~p~~~~~~i~~ 242 (299)
.. ....+.+ +++|+|+++|++|..+ ..+..+.+.+... .++++++|++||.+. .+...++.+.+.+
T Consensus 132 ~s-------~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~ 204 (213)
T PF00326_consen 132 LS-------PISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILD 204 (213)
T ss_dssp HH-------HGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHH
T ss_pred hc-------cccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHH
Confidence 11 1122233 7899999999999998 4666776666432 489999999999544 3556678899999
Q ss_pred HHhhc
Q 044899 243 FLMGF 247 (299)
Q Consensus 243 fl~~~ 247 (299)
|+++.
T Consensus 205 f~~~~ 209 (213)
T PF00326_consen 205 FFDKY 209 (213)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 62
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.73 E-value=3.4e-17 Score=124.56 Aligned_cols=158 Identities=15% Similarity=0.226 Sum_probs=112.0
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC-CCcEEEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF----FG-LEKVLCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
+++|+++|++|+|.|.... +-....+|+.++.+. .| .++++|+|+|+|+..++.+|.+.| ++++||
T Consensus 88 n~nv~~~DYSGyG~S~G~p-------sE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKP-------SERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCc-------ccccchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEE
Confidence 8999999999999996432 222344444444443 33 578999999999999999999998 999999
Q ss_pred eccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHh
Q 044899 95 VSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAIN 174 (299)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
.+|..... +. +....... +. +
T Consensus 159 ~SPf~S~~--------------------rv-----~~~~~~~~-~~-----------------------------~---- 179 (258)
T KOG1552|consen 159 HSPFTSGM--------------------RV-----AFPDTKTT-YC-----------------------------F---- 179 (258)
T ss_pred eccchhhh--------------------hh-----hccCcceE-Ee-----------------------------e----
Confidence 99964311 00 00000000 00 0
Q ss_pred hccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 175 ERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 175 ~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
......+.++.|+||+|++||++|.++ .....+++..+. ..+..++.|+||.- .+...++...+..|+...
T Consensus 180 d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~-~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 180 DAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE-KVEPLWVKGAGHND-IELYPEYIEHLRRFISSV 252 (258)
T ss_pred ccccccCcceeccCCEEEEecccCceecccccHHHHHhccc-cCCCcEEecCCCcc-cccCHHHHHHHHHHHHHh
Confidence 001124566788999999999999999 477788888774 36888889999954 477778889999998765
No 63
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.73 E-value=2.8e-17 Score=125.41 Aligned_cols=218 Identities=13% Similarity=0.171 Sum_probs=122.2
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCcEEEEeeChhHHHHHHHHHhh--hhhhcceEE
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG---LEKVLCLGVTAGAYILTLFAMKY--QERVLGLIL 94 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl 94 (299)
..+|+++|+||||+|.... ....+.+.++.|+.++++.+= ..+++||||||||.||...|... |. +.|+++
T Consensus 102 ~~r~~a~DlRgHGeTk~~~---e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~v 177 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVEN---EDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVV 177 (343)
T ss_pred ceeEEEeeccccCccccCC---hhhcCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEE
Confidence 6788999999999986432 345899999999999999863 34799999999999998887643 65 899999
Q ss_pred eccCCCCCchhHHHHHHHHHHHHHhhc-----chhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHH---HHhcccchhH
Q 044899 95 VSPICKAPSWTEWLYNKVLMNLLYFYG-----MCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRR---VLDQGQSLNV 166 (299)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 166 (299)
++..-... ......+..++.... +...+ +|-++....+..... ...-+.......+ +.-+.+....
T Consensus 178 iDVVEgtA----meAL~~m~~fL~~rP~~F~Si~~Ai-~W~v~sg~~Rn~~SA-rVsmP~~~~~~~eGh~yvwrtdL~kt 251 (343)
T KOG2564|consen 178 IDVVEGTA----MEALNSMQHFLRNRPKSFKSIEDAI-EWHVRSGQLRNRDSA-RVSMPSQLKQCEEGHCYVWRTDLEKT 251 (343)
T ss_pred EEEechHH----HHHHHHHHHHHhcCCccccchhhHH-HHHhccccccccccc-eEecchheeeccCCCcEEEEeecccc
Confidence 98643211 000111111111110 00000 111111111000000 0000000000000 0000111111
Q ss_pred HHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhh
Q 044899 167 MHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
..++.... ..+....-...+|-++|.+..|..-. ....- ++.. ..++.+++.+||+.+.+.|..++..+..|+.+
T Consensus 252 e~YW~gWF--~gLS~~Fl~~p~~klLilAg~d~LDk-dLtiG-QMQG-k~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 252 EQYWKGWF--KGLSDKFLGLPVPKLLILAGVDRLDK-DLTIG-QMQG-KFQLQVLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred chhHHHHH--hhhhhHhhCCCccceeEEecccccCc-ceeee-eecc-ceeeeeecccCceeccCCcchHHHHHHHHHhh
Confidence 11222111 22334444678888888888776641 01111 1221 57899999999999999999999999999998
Q ss_pred cCCccC
Q 044899 247 FGYCKQ 252 (299)
Q Consensus 247 ~~~~~~ 252 (299)
+.+..+
T Consensus 327 n~~~~~ 332 (343)
T KOG2564|consen 327 NRFAEP 332 (343)
T ss_pred hccccc
Confidence 875543
No 64
>PRK10566 esterase; Provisional
Probab=99.73 E-value=3.2e-16 Score=125.21 Aligned_cols=186 Identities=12% Similarity=0.022 Sum_probs=102.8
Q ss_pred hHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCC---CHHHHHHHHHHHHHH------hCCCcEEEEeeChhHHHHHHHH
Q 044899 13 AASLL-LHNFCIYHIDASGHELGADEIYSDFPLL---NVDDLAEQVAEVLDF------FGLEKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 13 ~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~---~~~~~~~dl~~~l~~------l~~~~~~lvGhS~Gg~ia~~~a 82 (299)
+...+ ..||+|+++|+||||.+........... .+....+|+.++++. ++.++++++||||||.+++.++
T Consensus 46 ~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~ 125 (249)
T PRK10566 46 FAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIM 125 (249)
T ss_pred HHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHH
Confidence 34444 4599999999999997632111000000 011223444444433 2346899999999999999999
Q ss_pred HhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc
Q 044899 83 MKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ 162 (299)
Q Consensus 83 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
.++|+....++++++... ... . .. .+...... .+......
T Consensus 126 ~~~~~~~~~~~~~~~~~~-----~~~-----~-------------~~----~~~~~~~~-----~~~~~~~~-------- 165 (249)
T PRK10566 126 ARHPWVKCVASLMGSGYF-----TSL-----A-------------RT----LFPPLIPE-----TAAQQAEF-------- 165 (249)
T ss_pred HhCCCeeEEEEeeCcHHH-----HHH-----H-------------HH----hccccccc-----ccccHHHH--------
Confidence 988864444444443210 000 0 00 00000000 00000000
Q ss_pred chhHHHHHHHHhhccchhhhhccC-CcceEEEecCCCCCCc--hhHHHHHhhCCC----ceeEEEEcCCCCcccccChHh
Q 044899 163 SLNVMHFLQAINERHDLTKGLKEL-QCKTLIFVGESSPFHT--ESLHMSATMGSK----NCGLVEVQACGSLVTEEYPLA 235 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~----~~~~~~~~~~gH~~~~e~p~~ 235 (299)
....... ...+....+.++ ++|+|+|+|++|.+++ .+..+.+.+... ++++++++++||... ..
T Consensus 166 ----~~~~~~~-~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~----~~ 236 (249)
T PRK10566 166 ----NNIVAPL-AEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT----PE 236 (249)
T ss_pred ----HHHHHHH-hhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC----HH
Confidence 0001111 112333445565 7999999999999993 666677766543 357788999999753 34
Q ss_pred HHHHHHHHHhhc
Q 044899 236 MLIPIELFLMGF 247 (299)
Q Consensus 236 ~~~~i~~fl~~~ 247 (299)
..+.+.+||++.
T Consensus 237 ~~~~~~~fl~~~ 248 (249)
T PRK10566 237 ALDAGVAFFRQH 248 (249)
T ss_pred HHHHHHHHHHhh
Confidence 678888998753
No 65
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.72 E-value=9.8e-16 Score=115.90 Aligned_cols=202 Identities=15% Similarity=0.105 Sum_probs=125.2
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCcEEEEeeChhHHHHHHHHHhhhh--
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLD-FFGLEKVLCLGVTAGAYILTLFAMKYQE-- 87 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~-~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-- 87 (299)
..+...+.....++++++||+|.-... ....+++.+++.+..-+. .....++.++||||||++|.++|.+...
T Consensus 24 r~W~~~lp~~iel~avqlPGR~~r~~e----p~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g 99 (244)
T COG3208 24 RSWSRRLPADIELLAVQLPGRGDRFGE----PLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAG 99 (244)
T ss_pred HHHHhhCCchhheeeecCCCcccccCC----cccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcC
Confidence 334456677899999999999865322 335789999999999888 4556799999999999999999987632
Q ss_pred -hhcceEEeccCCCCCch----hHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc
Q 044899 88 -RVLGLILVSPICKAPSW----TEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ 162 (299)
Q Consensus 88 -~v~~lvl~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
...++.+.+........ ........+..+....|+...+ .. ++++.+.+.-.+..
T Consensus 100 ~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~-------------le-----d~El~~l~LPilRA-- 159 (244)
T COG3208 100 LPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPEL-------------LE-----DPELMALFLPILRA-- 159 (244)
T ss_pred CCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHH-------------hc-----CHHHHHHHHHHHHH--
Confidence 25566666654331111 1111112222223333333111 00 23333222211110
Q ss_pred chhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHH
Q 044899 163 SLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPI 240 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 240 (299)
-++.+ ..+.+... ..+.||+.++.|++|..+. ....+.+... ...++++++ +||+...++.+++.+.|
T Consensus 160 ------D~~~~-e~Y~~~~~-~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-~~f~l~~fd-GgHFfl~~~~~~v~~~i 229 (244)
T COG3208 160 ------DFRAL-ESYRYPPP-APLACPIHAFGGEKDHEVSRDELGAWREHTK-GDFTLRVFD-GGHFFLNQQREEVLARL 229 (244)
T ss_pred ------HHHHh-cccccCCC-CCcCcceEEeccCcchhccHHHHHHHHHhhc-CCceEEEec-CcceehhhhHHHHHHHH
Confidence 01111 11111111 4789999999999999983 3333444333 368999997 89999999999999999
Q ss_pred HHHHhh
Q 044899 241 ELFLMG 246 (299)
Q Consensus 241 ~~fl~~ 246 (299)
.+.+..
T Consensus 230 ~~~l~~ 235 (244)
T COG3208 230 EQHLAH 235 (244)
T ss_pred HHHhhh
Confidence 998864
No 66
>PRK11071 esterase YqiA; Provisional
Probab=99.72 E-value=2.1e-16 Score=120.06 Aligned_cols=156 Identities=14% Similarity=0.121 Sum_probs=100.8
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+|+|+++|+|||| +++++++.+++++++.++++++||||||.+++.+|.++|. ++|+++|..
T Consensus 32 ~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~ 93 (190)
T PRK11071 32 DIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAV 93 (190)
T ss_pred CCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCC
Confidence 8999999999984 3578899999999999999999999999999999999983 578888864
Q ss_pred CCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccch
Q 044899 100 KAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDL 179 (299)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (299)
. ..... ... .+.. ...+....+.- ... ++... ...+.
T Consensus 94 ~---~~~~~-----~~~---~~~~-------~~~~~~~~~~~-----~~~-------------------~~~d~-~~~~~ 130 (190)
T PRK11071 94 R---PFELL-----TDY---LGEN-------ENPYTGQQYVL-----ESR-------------------HIYDL-KVMQI 130 (190)
T ss_pred C---HHHHH-----HHh---cCCc-------ccccCCCcEEE-----cHH-------------------HHHHH-HhcCC
Confidence 4 11100 000 0000 00000000000 000 00111 00122
Q ss_pred hhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 180 TKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 180 ~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
.. +. ..+|+++|+|++|.+++ .+..+.+ +++.++++|++|.+ +..+++.+.+.+|++
T Consensus 131 ~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~-----~~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 131 DP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYA-----ACRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred cc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHH-----hcceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 12 33 67889999999999994 3444444 35677889999966 555889999999975
No 67
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.69 E-value=8.7e-15 Score=137.67 Aligned_cols=221 Identities=11% Similarity=0.070 Sum_probs=122.6
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hCCCcEEEEeeChhHHHHHHHHHhh-hhhhcc
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF---FGLEKVLCLGVTAGAYILTLFAMKY-QERVLG 91 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~ 91 (299)
+...||+|+++|+ |.++.+. ....+++.+++..+.+.++. +..++++++||||||.+++.+++.+ +++|++
T Consensus 95 L~~~g~~v~~~d~---G~~~~~~--~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~ 169 (994)
T PRK07868 95 LHRAGLDPWVIDF---GSPDKVE--GGMERNLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIAS 169 (994)
T ss_pred HHHCCCEEEEEcC---CCCChhH--cCccCCHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccce
Confidence 3467999999994 5555421 11236777777777766654 3457899999999999999998755 568999
Q ss_pred eEEeccCCCCCc--h---h-HH-HH-HHHHH-HHHHhhcchhH--------------HHH--HHHhhhhhhcccCCCCCC
Q 044899 92 LILVSPICKAPS--W---T-EW-LY-NKVLM-NLLYFYGMCGV--------------LKE--CLLQRYFSKEFRSGEHGA 146 (299)
Q Consensus 92 lvl~~~~~~~~~--~---~-~~-~~-~~~~~-~~~~~~~~~~~--------------~~~--~~~~~~~~~~~~~~~~~~ 146 (299)
+|++++...... . . .. .. ..... .+......... ... .+...+..+... .
T Consensus 170 lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~-----~ 244 (994)
T PRK07868 170 IVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREAL-----L 244 (994)
T ss_pred EEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhh-----c
Confidence 999887643211 0 0 00 00 00000 00000000000 000 001111111100 0
Q ss_pred chHHHHHHHHHHh--cccchhHHHHHHHHhhc-------cch---hhhhccCCcceEEEecCCCCCCc--hhHHHHHhhC
Q 044899 147 ESDIIQACRRVLD--QGQSLNVMHFLQAINER-------HDL---TKGLKELQCKTLIFVGESSPFHT--ESLHMSATMG 212 (299)
Q Consensus 147 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-------~~~---~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~ 212 (299)
+++....+..... .........+.+.+... ... ...++++++|+|+|+|++|.+++ .++.+.+.++
T Consensus 245 ~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~ 324 (994)
T PRK07868 245 PREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAP 324 (994)
T ss_pred cchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCC
Confidence 1111122221110 11111222222322111 111 12588999999999999999983 5566777776
Q ss_pred CCceeE-EEEcCCCCcccc---cChHhHHHHHHHHHhhcC
Q 044899 213 SKNCGL-VEVQACGSLVTE---EYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 213 ~~~~~~-~~~~~~gH~~~~---e~p~~~~~~i~~fl~~~~ 248 (299)
+.++ ++++++||+.++ ..++++...|.+||++..
T Consensus 325 --~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~~ 362 (994)
T PRK07868 325 --NAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWLE 362 (994)
T ss_pred --CCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHhc
Confidence 5676 677899998776 367789999999999764
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.63 E-value=2.6e-13 Score=104.98 Aligned_cols=219 Identities=15% Similarity=0.128 Sum_probs=129.8
Q ss_pred ccccCHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEeeChhHHHHHHHHH
Q 044899 6 GLFFCPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE-KVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 6 ~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~ 83 (299)
+...|..+.+.|. .|.|+|.+++||+|.+..+. ...|+-.+-..-+.++++.++++ +++++|||.||-.|+.++.
T Consensus 47 SH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~---~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~ 123 (297)
T PF06342_consen 47 SHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYP---DQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAV 123 (297)
T ss_pred CccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCc---ccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHh
Confidence 3455666777775 49999999999999987532 45689999999999999999986 7889999999999999999
Q ss_pred hhhhhhcceEEeccCCCCCch--hHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcc
Q 044899 84 KYQERVLGLILVSPICKAPSW--TEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQG 161 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (299)
.+| +.++++++|....+-. .+.........+... ...++.+.++..++...-..-. ..++.....+ .+...
T Consensus 124 ~~~--~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~--lp~~~~~~i~~~~y~~iG~KV~--~GeeA~na~r-~m~~~ 196 (297)
T PF06342_consen 124 THP--LHGLVLINPPGLRPHKGIRPLSRMETINYLYDL--LPRFIINAIMYFYYRMIGFKVS--DGEEAINAMR-SMQNC 196 (297)
T ss_pred cCc--cceEEEecCCccccccCcCHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHhCeeec--ChHHHHHHHH-HHHhc
Confidence 996 6799999997654321 111001111111111 1112222222222211100000 0111111111 11111
Q ss_pred cchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHH------------------------hhCC-C
Q 044899 162 QSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSA------------------------TMGS-K 214 (299)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~------------------------~~~~-~ 214 (299)
.. ..+..+.+.+.+-++|+++++|.+|..++ -..+.+. .+.. .
T Consensus 197 df----------~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~ 266 (297)
T PF06342_consen 197 DF----------EEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQ 266 (297)
T ss_pred CH----------HHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCC
Confidence 00 11223334555667899999999999873 2222222 2211 1
Q ss_pred ceeEEEEcCCCCcccccChHhHHHHHHHHH
Q 044899 215 NCGLVEVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 215 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
...-+.+.+.||+.+-.+++-+++.+...|
T Consensus 267 ~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 267 KGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred ceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 223456667899888888888888887765
No 69
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.63 E-value=9.1e-15 Score=106.76 Aligned_cols=123 Identities=17% Similarity=0.319 Sum_probs=88.7
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
.+.+.||.|+.+|+||+|.+.. .....++.+++. .+..+.++++++|||+||.+++.++.+. .+++++|+
T Consensus 21 ~l~~~G~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~ 90 (145)
T PF12695_consen 21 ALAEQGYAVVAFDYPGHGDSDG-------ADAVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVL 90 (145)
T ss_dssp HHHHTTEEEEEESCTTSTTSHH-------SHHHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEE
T ss_pred HHHHCCCEEEEEecCCCCccch-------hHHHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEE
Confidence 3456699999999999997621 112333333332 1123667999999999999999999988 78999999
Q ss_pred eccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHh
Q 044899 95 VSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAIN 174 (299)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (299)
+++.+.
T Consensus 91 ~~~~~~-------------------------------------------------------------------------- 96 (145)
T PF12695_consen 91 LSPYPD-------------------------------------------------------------------------- 96 (145)
T ss_dssp ESESSG--------------------------------------------------------------------------
T ss_pred ecCccc--------------------------------------------------------------------------
Confidence 998210
Q ss_pred hccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCc
Q 044899 175 ERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSL 227 (299)
Q Consensus 175 ~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~ 227 (299)
.+.+...+.|+++++|++|..+ +....+.+.++ ...+++++++++|+
T Consensus 97 -----~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 -----SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALP-GPKELYIIPGAGHF 145 (145)
T ss_dssp -----CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHC-SSEEEEEETTS-TT
T ss_pred -----hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcC-CCcEEEEeCCCcCc
Confidence 0112245669999999999999 45667777777 36899999999995
No 70
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.61 E-value=8.6e-16 Score=113.00 Aligned_cols=174 Identities=15% Similarity=0.130 Sum_probs=116.8
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCcEEEEeeChhHHHHHHHHHhhhhhhcce
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF------GLEKVLCLGVTAGAYILTLFAMKYQERVLGL 92 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 92 (299)
-+.+|+.+++||+|.|...+ +-+.+.-|-.++++.+ ...+++++|.|+||.+|+.+|++..+++.++
T Consensus 105 l~mnv~ivsYRGYG~S~Gsp-------sE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ 177 (300)
T KOG4391|consen 105 LKMNVLIVSYRGYGKSEGSP-------SEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAI 177 (300)
T ss_pred cCceEEEEEeeccccCCCCc-------cccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeee
Confidence 37899999999999996542 3333334444445544 3358999999999999999999999999999
Q ss_pred EEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHH
Q 044899 93 ILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQA 172 (299)
Q Consensus 93 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
|+-+++...+...... .....+ . .+..+..+.
T Consensus 178 ivENTF~SIp~~~i~~--------v~p~~~-k-----~i~~lc~kn---------------------------------- 209 (300)
T KOG4391|consen 178 IVENTFLSIPHMAIPL--------VFPFPM-K-----YIPLLCYKN---------------------------------- 209 (300)
T ss_pred eeechhccchhhhhhe--------eccchh-h-----HHHHHHHHh----------------------------------
Confidence 9999876543211000 000000 0 000010000
Q ss_pred HhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhcCCc
Q 044899 173 INERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGFGYC 250 (299)
Q Consensus 173 ~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~ 250 (299)
...-...+.+-+.|.|+|.|.+|.++| ..+.+.+..++...++.++|++.|.-.+- -+-+.++|.+||.+....
T Consensus 210 ---~~~S~~ki~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE~~~~ 285 (300)
T KOG4391|consen 210 ---KWLSYRKIGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI-CDGYFQAIEDFLAEVVKS 285 (300)
T ss_pred ---hhcchhhhccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE-eccHHHHHHHHHHHhccC
Confidence 001112334568899999999999994 56677888888789999999999954432 356889999999988654
Q ss_pred c
Q 044899 251 K 251 (299)
Q Consensus 251 ~ 251 (299)
.
T Consensus 286 ~ 286 (300)
T KOG4391|consen 286 S 286 (300)
T ss_pred C
Confidence 3
No 71
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.58 E-value=3.2e-13 Score=112.28 Aligned_cols=226 Identities=12% Similarity=0.077 Sum_probs=132.8
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh-----hh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY-----QE 87 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~ 87 (299)
+..++. |+.|+..|+..-+.. +.....++++++++-+.++++++|.+ ++++|+|+||..++.+++.+ |+
T Consensus 123 V~~Ll~-g~dVYl~DW~~p~~v----p~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~ 196 (406)
T TIGR01849 123 VEALLP-DHDVYITDWVNARMV----PLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPA 196 (406)
T ss_pred HHHHhC-CCcEEEEeCCCCCCC----chhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCC
Confidence 444555 999999999887744 22245689999999999999999877 99999999999988877766 56
Q ss_pred hhcceEEeccCCCCCch---h-HHHHHHHHHHHH----Hh-------hc---chhHHHHHH------------Hhhhhhh
Q 044899 88 RVLGLILVSPICKAPSW---T-EWLYNKVLMNLL----YF-------YG---MCGVLKECL------------LQRYFSK 137 (299)
Q Consensus 88 ~v~~lvl~~~~~~~~~~---~-~~~~~~~~~~~~----~~-------~~---~~~~~~~~~------------~~~~~~~ 137 (299)
+++++++++++...... . .+.....+.... .. .+ ...++.... ...++..
T Consensus 197 ~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~ 276 (406)
T TIGR01849 197 QPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLH 276 (406)
T ss_pred CcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHH
Confidence 79999999987764321 1 111000000000 00 00 111110000 0111111
Q ss_pred cccCCCCCCchHHHHHHHHHHhc---ccchhHHHHHHHHhhccch----------hhhhccCC-cceEEEecCCCCCCc-
Q 044899 138 EFRSGEHGAESDIIQACRRVLDQ---GQSLNVMHFLQAINERHDL----------TKGLKELQ-CKTLIFVGESSPFHT- 202 (299)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----------~~~l~~i~-~Pvl~i~G~~D~~~~- 202 (299)
..... ....+....+.+++.. ...+.+..+.+.+..+..+ .-.+++|+ +|+|.|.|++|.+++
T Consensus 277 l~~gd--~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~ 354 (406)
T TIGR01849 277 LVKGD--GQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGL 354 (406)
T ss_pred HhcCC--cchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCH
Confidence 10000 0011111212222111 1233444444444333222 23578899 999999999999993
Q ss_pred -hhHHHHHh---hCCCceeEEEEcCCCCccccc---ChHhHHHHHHHHHhh
Q 044899 203 -ESLHMSAT---MGSKNCGLVEVQACGSLVTEE---YPLAMLIPIELFLMG 246 (299)
Q Consensus 203 -~~~~~~~~---~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 246 (299)
.+....+. +++...+.+..+++||+..+. ..+++.-.|.+||.+
T Consensus 355 ~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~ 405 (406)
T TIGR01849 355 GQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRR 405 (406)
T ss_pred HHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHh
Confidence 44444444 365566788888899987763 456688999999975
No 72
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.57 E-value=4.7e-14 Score=111.95 Aligned_cols=84 Identities=24% Similarity=0.227 Sum_probs=68.3
Q ss_pred Hhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH---HHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 14 ASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVL---DFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 14 ~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l---~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
.+.| ..||+|+++|+||||.|... ....+++.+++|+.+++ ++.+.++++|+||||||.+++.+|.++|+++
T Consensus 49 a~~La~~Gy~Vl~~Dl~G~G~S~g~----~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v 124 (266)
T TIGR03101 49 ARAFAAGGFGVLQIDLYGCGDSAGD----FAAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKC 124 (266)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCc----cccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCcccc
Confidence 3444 46999999999999998643 22357888888877754 4456779999999999999999999999999
Q ss_pred cceEEeccCCCC
Q 044899 90 LGLILVSPICKA 101 (299)
Q Consensus 90 ~~lvl~~~~~~~ 101 (299)
+++|+++|....
T Consensus 125 ~~lVL~~P~~~g 136 (266)
T TIGR03101 125 NRLVLWQPVVSG 136 (266)
T ss_pred ceEEEeccccch
Confidence 999999986543
No 73
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.57 E-value=2e-13 Score=107.76 Aligned_cols=216 Identities=16% Similarity=0.148 Sum_probs=110.1
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhH-HHHHHHHHhhhh-h
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGA-YILTLFAMKYQE-R 88 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg-~ia~~~a~~~p~-~ 88 (299)
.+..+||.|+++++||||.+....+.-...... +|+..+++.+ ...++..+|.|+|| +++..++.+-.+ .
T Consensus 99 ~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t----~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~ 174 (345)
T COG0429 99 ALSRRGWLVVVFHFRGCSGEANTSPRLYHSGET----EDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLP 174 (345)
T ss_pred HHHhcCCeEEEEecccccCCcccCcceecccch----hHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcc
Confidence 344579999999999999875433221111222 5555555444 45699999999999 555544443211 2
Q ss_pred hcceEEeccCCCCC--------chhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCc-hHHHHHHHHHH-
Q 044899 89 VLGLILVSPICKAP--------SWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAE-SDIIQACRRVL- 158 (299)
Q Consensus 89 v~~lvl~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~- 158 (299)
+.+.+.++.+.... .+...++...+.+ .+......++ ..- ... ...+ .+..+.++...
T Consensus 175 ~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~---------~L~~~~~~kl-~~l-~~~-~p~~~~~~ik~~~ti~e 242 (345)
T COG0429 175 LDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLR---------NLKRNAARKL-KEL-EPS-LPGTVLAAIKRCRTIRE 242 (345)
T ss_pred cceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHH---------HHHHHHHHHH-Hhc-Ccc-cCcHHHHHHHhhchHHh
Confidence 44544444322211 0110111111111 1101110000 000 000 0001 11222211111
Q ss_pred -h---cccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC-chhHHHHHhhCCCceeEEEEcCCCCccccc--
Q 044899 159 -D---QGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH-TESLHMSATMGSKNCGLVEVQACGSLVTEE-- 231 (299)
Q Consensus 159 -~---~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-- 231 (299)
. .....++......+ .+..-...+.+|.+|+|+|++.+|+++ +..........++++.+..-+.+||..++.
T Consensus 243 FD~~~Tap~~Gf~da~dYY-r~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~ 321 (345)
T COG0429 243 FDDLLTAPLHGFADAEDYY-RQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGK 321 (345)
T ss_pred ccceeeecccCCCcHHHHH-HhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCc
Confidence 0 01111222222222 224445678999999999999999999 334433333344489999999999988876
Q ss_pred --ChH-hHHHHHHHHHhhc
Q 044899 232 --YPL-AMLIPIELFLMGF 247 (299)
Q Consensus 232 --~p~-~~~~~i~~fl~~~ 247 (299)
+|. ...+.+.+||+..
T Consensus 322 ~~~~~~W~~~ri~~~l~~~ 340 (345)
T COG0429 322 LLHPQMWLEQRILDWLDPF 340 (345)
T ss_pred cccchhhHHHHHHHHHHHH
Confidence 444 4667888888753
No 74
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.55 E-value=8.3e-13 Score=108.08 Aligned_cols=227 Identities=14% Similarity=0.100 Sum_probs=123.4
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh---hhc
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE---RVL 90 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~ 90 (299)
.+...+||+|++++.||+|+|.-..+.-......+|+.+.+..+.+.....++..+|.||||.+.+.|..+-.+ .+.
T Consensus 148 ~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~ 227 (409)
T KOG1838|consen 148 HEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIA 227 (409)
T ss_pred HHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCcee
Confidence 34456799999999999998865443333334455555555555555566689999999999999999887543 456
Q ss_pred ceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhh---hhhhcccCCCCCCchHHHHHHHHHHhcc--cchh
Q 044899 91 GLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQR---YFSKEFRSGEHGAESDIIQACRRVLDQG--QSLN 165 (299)
Q Consensus 91 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 165 (299)
++++++|.-... .. +.......+.+....+..-+.+.+... ++.......... ....++.+-+.+... .-..
T Consensus 228 a~~v~~Pwd~~~-~~-~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~-~~~SvreFD~~~t~~~~gf~~ 304 (409)
T KOG1838|consen 228 AVAVCNPWDLLA-AS-RSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVIL-KSRSVREFDEALTRPMFGFKS 304 (409)
T ss_pred EEEEeccchhhh-hh-hHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhh-hcCcHHHHHhhhhhhhcCCCc
Confidence 666666653210 00 000000000000001111111111000 011100000000 001111111111110 1111
Q ss_pred HHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc-hhHHHHHhhCCCceeEEEEcCCCCcccccC----hHhHH-HH
Q 044899 166 VMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT-ESLHMSATMGSKNCGLVEVQACGSLVTEEY----PLAML-IP 239 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~-~~ 239 (299)
.. .+..+......+.+|++|+|+|++.+|++++ .+....+...++++-+++-..+||..++|. +.... +.
T Consensus 305 ~d----eYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~ 380 (409)
T KOG1838|consen 305 VD----EYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKL 380 (409)
T ss_pred HH----HHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHH
Confidence 22 2223456677889999999999999999994 455555555655788888889999999886 22333 44
Q ss_pred HHHHHhhc
Q 044899 240 IELFLMGF 247 (299)
Q Consensus 240 i~~fl~~~ 247 (299)
+.+|+...
T Consensus 381 l~ef~~~~ 388 (409)
T KOG1838|consen 381 LVEFLGNA 388 (409)
T ss_pred HHHHHHHH
Confidence 78887754
No 75
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.54 E-value=4.1e-13 Score=114.91 Aligned_cols=200 Identities=14% Similarity=0.166 Sum_probs=117.8
Q ss_pred hhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHH----HHH
Q 044899 12 DAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTL----FAM 83 (299)
Q Consensus 12 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~----~a~ 83 (299)
-+..++.+||+|+.+|+++-+.. ....+++++++.+.+.++.+ |.++++++|+||||.++.. +++
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~-------~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA 311 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKA-------HREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQA 311 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChh-------hcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHh
Confidence 35556788999999999997755 23578999998777777765 5679999999999999997 788
Q ss_pred hhhh-hhcceEEeccCCCCCchh--HHHH-HHHH---HHHHHhhc---------------chhHHHHHHHhhhhhhcccC
Q 044899 84 KYQE-RVLGLILVSPICKAPSWT--EWLY-NKVL---MNLLYFYG---------------MCGVLKECLLQRYFSKEFRS 141 (299)
Q Consensus 84 ~~p~-~v~~lvl~~~~~~~~~~~--~~~~-~~~~---~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~ 141 (299)
++++ +|++++++.+........ ..+. ...+ .......| ....+..++...+. ..
T Consensus 312 ~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~G~lpg~~ma~~F~~LrP~dliw~y~v~~yl----lg 387 (560)
T TIGR01839 312 LGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQAGVLDGSEMAKVFAWMRPNDLIWNYWVNNYL----LG 387 (560)
T ss_pred cCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhcCCcCHHHHHHHHHhcCchhhhHHHHHHHhh----cC
Confidence 8886 799999998866543211 1000 0000 01111111 01111111111110 11
Q ss_pred CCCCCchHHHHHHHHHHhcc---cchhHHHHHHHHhhccchh-----------hhhccCCcceEEEecCCCCCCc--hhH
Q 044899 142 GEHGAESDIIQACRRVLDQG---QSLNVMHFLQAINERHDLT-----------KGLKELQCKTLIFVGESSPFHT--ESL 205 (299)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----------~~l~~i~~Pvl~i~G~~D~~~~--~~~ 205 (299)
. .+...+ +..+.... ....+..+++.+ .+..+. -.+++|+||++++.|+.|.++| .+.
T Consensus 388 ~----~p~~fd-ll~Wn~D~t~lPg~~~~e~l~ly-~~N~L~~pG~l~v~G~~idL~~I~~Pvl~va~~~DHIvPw~s~~ 461 (560)
T TIGR01839 388 N----EPPAFD-ILYWNNDTTRLPAAFHGDLLDMF-KSNPLTRPDALEVCGTPIDLKKVKCDSFSVAGTNDHITPWDAVY 461 (560)
T ss_pred C----Ccchhh-HHHHhCcCccchHHHHHHHHHHH-hcCCCCCCCCEEECCEEechhcCCCCeEEEecCcCCcCCHHHHH
Confidence 1 111111 22232222 222233333322 222222 2588999999999999999994 556
Q ss_pred HHHHhhCCCceeEEEEcCCCCcccc
Q 044899 206 HMSATMGSKNCGLVEVQACGSLVTE 230 (299)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~gH~~~~ 230 (299)
...+.+.. ..+++..+ +||..-+
T Consensus 462 ~~~~l~gs-~~~fvl~~-gGHIggi 484 (560)
T TIGR01839 462 RSALLLGG-KRRFVLSN-SGHIQSI 484 (560)
T ss_pred HHHHHcCC-CeEEEecC-CCccccc
Confidence 66776665 57777775 8895433
No 76
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.54 E-value=1.3e-13 Score=101.52 Aligned_cols=189 Identities=16% Similarity=0.195 Sum_probs=115.0
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cE--EEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE-KV--LCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~~--~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
..|+.++.+|++|.|+|.... ..-.....++|+..+++++... ++ +++|||-||-+++.+|.++++ ++-+|.
T Consensus 60 ~~gis~fRfDF~GnGeS~gsf----~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viN 134 (269)
T KOG4667|consen 60 KEGISAFRFDFSGNGESEGSF----YYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVIN 134 (269)
T ss_pred hcCceEEEEEecCCCCcCCcc----ccCcccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEE
Confidence 359999999999999996532 2224445569999999988643 32 689999999999999999987 777777
Q ss_pred eccCCCCCchhH-HHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHH
Q 044899 95 VSPICKAPSWTE-WLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAI 173 (299)
Q Consensus 95 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (299)
+++-........ +..... + .+....-|-........ .+.. ...+... ..
T Consensus 135 csGRydl~~~I~eRlg~~~-------------l-~~ike~Gfid~~~rkG~--y~~r----------vt~eSlm---dr- 184 (269)
T KOG4667|consen 135 CSGRYDLKNGINERLGEDY-------------L-ERIKEQGFIDVGPRKGK--YGYR----------VTEESLM---DR- 184 (269)
T ss_pred cccccchhcchhhhhcccH-------------H-HHHHhCCceecCcccCC--cCce----------ecHHHHH---HH-
Confidence 776443322221 110000 0 11111111100000000 0000 0000000 00
Q ss_pred hhccchhhhhccC--CcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 174 NERHDLTKGLKEL--QCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 174 ~~~~~~~~~l~~i--~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
-..+..+...+| +||||-+||..|.++ +.+.++++.++ +.++++++|+.|... .+..+.......|.+
T Consensus 185 -Lntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~--nH~L~iIEgADHnyt-~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 185 -LNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIP--NHKLEIIEGADHNYT-GHQSQLVSLGLEFIK 256 (269)
T ss_pred -HhchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhcc--CCceEEecCCCcCcc-chhhhHhhhcceeEE
Confidence 113333333334 799999999999999 58889999998 688999999999554 455556666666654
No 77
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.48 E-value=4.1e-12 Score=102.79 Aligned_cols=82 Identities=13% Similarity=0.187 Sum_probs=59.1
Q ss_pred cCcEEEEECC--CCCCCCCCCC----------------CCCCCCCCHHH-HHHHHHHHHHH---hCCCcEEEEeeChhHH
Q 044899 19 HNFCIYHIDA--SGHELGADEI----------------YSDFPLLNVDD-LAEQVAEVLDF---FGLEKVLCLGVTAGAY 76 (299)
Q Consensus 19 ~~~~vi~~D~--~G~G~S~~~~----------------~~~~~~~~~~~-~~~dl~~~l~~---l~~~~~~lvGhS~Gg~ 76 (299)
.||.|+++|. +|+|.+.... ......+...+ +++++..+++. ++.++++++||||||.
T Consensus 71 ~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~ 150 (275)
T TIGR02821 71 HGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGH 150 (275)
T ss_pred cCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHH
Confidence 4899999998 5555332100 00001223333 46788888877 3556899999999999
Q ss_pred HHHHHHHhhhhhhcceEEeccCCC
Q 044899 77 ILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 77 ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
+++.++.++|+.+++++++++...
T Consensus 151 ~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 151 GALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHhCcccceEEEEECCccC
Confidence 999999999999999999988754
No 78
>PLN02442 S-formylglutathione hydrolase
Probab=99.47 E-value=2.8e-12 Score=103.95 Aligned_cols=133 Identities=14% Similarity=0.214 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHH
Q 044899 48 DDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLK 127 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (299)
+++.+.+....+.++.++++|+||||||..|+.++.++|+++++++.+++........ +. ..
T Consensus 127 ~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~~~~~~-~~-~~---------------- 188 (283)
T PLN02442 127 KELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIANPINCP-WG-QK---------------- 188 (283)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccCcccCc-hh-hH----------------
Confidence 3444445555555677899999999999999999999999999999999875422110 00 00
Q ss_pred HHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCch---h
Q 044899 128 ECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTE---S 204 (299)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~---~ 204 (299)
....++... .+. +.+ + ........+...++|+++++|++|.+++. .
T Consensus 189 --~~~~~~g~~---------~~~---~~~----------------~-d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s 237 (283)
T PLN02442 189 --AFTNYLGSD---------KAD---WEE----------------Y-DATELVSKFNDVSATILIDQGEADKFLKEQLLP 237 (283)
T ss_pred --HHHHHcCCC---------hhh---HHH----------------c-ChhhhhhhccccCCCEEEEECCCCccccccccH
Confidence 000111110 000 000 0 00111223345689999999999988852 4
Q ss_pred HHHHHhhCC--CceeEEEEcCCCCccc
Q 044899 205 LHMSATMGS--KNCGLVEVQACGSLVT 229 (299)
Q Consensus 205 ~~~~~~~~~--~~~~~~~~~~~gH~~~ 229 (299)
..+.+.+.. ..++++++++.+|..+
T Consensus 238 ~~~~~~l~~~g~~~~~~~~pg~~H~~~ 264 (283)
T PLN02442 238 ENFEEACKEAGAPVTLRLQPGYDHSYF 264 (283)
T ss_pred HHHHHHHHHcCCCeEEEEeCCCCccHH
Confidence 455554432 2588999999999654
No 79
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.44 E-value=1.7e-12 Score=116.17 Aligned_cols=191 Identities=17% Similarity=0.138 Sum_probs=117.0
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCC---CC-CCCCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEeeChhHHHHHHHHH
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGA---DE-IYSDFPLLNVDDLAEQVAEVLDFFGL---EKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~---~~-~~~~~~~~~~~~~~~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~ 83 (299)
..+..+...||.|+.++.||-+.-. .. ...+.....++++.+.+. ++...+. +++.|+|||.||++++..+.
T Consensus 414 ~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~ 492 (620)
T COG1506 414 PEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAAT 492 (620)
T ss_pred hhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHh
Confidence 3456677889999999999754311 11 111233456677766666 5554443 38999999999999999999
Q ss_pred hhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc
Q 044899 84 KYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS 163 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
+.| ++++.+...+...-. ... .... ...++.... . .....
T Consensus 493 ~~~-~f~a~~~~~~~~~~~---~~~-----------~~~~-------~~~~~~~~~-----------------~-~~~~~ 532 (620)
T COG1506 493 KTP-RFKAAVAVAGGVDWL---LYF-----------GEST-------EGLRFDPEE-----------------N-GGGPP 532 (620)
T ss_pred cCc-hhheEEeccCcchhh---hhc-----------cccc-------hhhcCCHHH-----------------h-CCCcc
Confidence 988 677766666543210 000 0000 000000000 0 00000
Q ss_pred hhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCC--ceeEEEEcCCCCcccc-cChHhHHH
Q 044899 164 LNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSK--NCGLVEVQACGSLVTE-EYPLAMLI 238 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~ 238 (299)
. ....+ ..........++++|+|+|||++|..+ +++..+.+.+... .++++++|+.||.+.- ++...+.+
T Consensus 533 ~----~~~~~-~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~ 607 (620)
T COG1506 533 E----DREKY-EDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLK 607 (620)
T ss_pred c----ChHHH-HhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHH
Confidence 0 00000 112333455689999999999999988 5777888777543 5889999999997765 55666788
Q ss_pred HHHHHHhhc
Q 044899 239 PIELFLMGF 247 (299)
Q Consensus 239 ~i~~fl~~~ 247 (299)
.+.+|+++.
T Consensus 608 ~~~~~~~~~ 616 (620)
T COG1506 608 EILDWFKRH 616 (620)
T ss_pred HHHHHHHHH
Confidence 888888764
No 80
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.43 E-value=5.8e-11 Score=93.61 Aligned_cols=208 Identities=14% Similarity=0.097 Sum_probs=119.1
Q ss_pred ccccCHhhHhhhhcC-cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC-cEEEEeeChhHHHHHHHHH
Q 044899 6 GLFFCPDAASLLLHN-FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE-KVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 6 ~~~~~~~~~~~l~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+.|..++..+... +.|+.++.+|.+... ....+++++++...+.|.....+ +++|+|||+||.+|+++|.
T Consensus 12 ~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~------~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~ 85 (229)
T PF00975_consen 12 SASSYRPLARALPDDVIGVYGIEYPGRGDDE------PPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMAR 85 (229)
T ss_dssp SGGGGHHHHHHHTTTEEEEEEECSTTSCTTS------HEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHH
T ss_pred CHHHHHHHHHhCCCCeEEEEEEecCCCCCCC------CCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHH
Confidence 345567788888886 999999999997332 22479999999998888877666 9999999999999999998
Q ss_pred hhhh---hhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhc
Q 044899 84 KYQE---RVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQ 160 (299)
Q Consensus 84 ~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (299)
+..+ .|..++++++.+................ ....+.+... . ...... ..+....+.+
T Consensus 86 ~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~------~~~~~~~~~~--~-~~~~~~-----~~~~~~~~~~---- 147 (229)
T PF00975_consen 86 QLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQ------FIEELRRIGG--T-PDASLE-----DEELLARLLR---- 147 (229)
T ss_dssp HHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHH------HHHHHHHHCH--H-HHHHCH-----HHHHHHHHHH----
T ss_pred HHHHhhhccCceEEecCCCCCcccchhhhhhhHHH------HHHHHHHhcC--C-chhhhc-----CHHHHHHHHH----
Confidence 7643 4889999997654322111110000000 0000000000 0 000000 0111111111
Q ss_pred ccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchh----HHHHHhhCCCceeEEEEcCCCCccccc-ChHh
Q 044899 161 GQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTES----LHMSATMGSKNCGLVEVQACGSLVTEE-YPLA 235 (299)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~----~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~ 235 (299)
.+......+ .+... .....-.+|.++.....|+..... ...++.+.....+++.++ ++|+.++. +..+
T Consensus 148 ----~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~ 220 (229)
T PF00975_consen 148 ----ALRDDFQAL-ENYSI-RPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAE 220 (229)
T ss_dssp ----HHHHHHHHH-HTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHH
T ss_pred ----HHHHHHHHH-hhccC-CccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHH
Confidence 111111111 11110 011111567888888888887322 221333433357888887 79998887 7778
Q ss_pred HHHHHHHHH
Q 044899 236 MLIPIELFL 244 (299)
Q Consensus 236 ~~~~i~~fl 244 (299)
+++.|.++|
T Consensus 221 i~~~I~~~~ 229 (229)
T PF00975_consen 221 IAEKIAEWL 229 (229)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHhccC
Confidence 888888875
No 81
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.42 E-value=8.7e-12 Score=90.58 Aligned_cols=145 Identities=18% Similarity=0.241 Sum_probs=96.9
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---C-c-EEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL---E-K-VLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~---~-~-~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
+...||.++.+|+||-|+|..... ..+.+ .+|..+.++.++. + + +.|.|+|+|++|++.+|.+.|+ ..
T Consensus 56 l~~~G~atlRfNfRgVG~S~G~fD-----~GiGE-~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e-~~ 128 (210)
T COG2945 56 LVKRGFATLRFNFRGVGRSQGEFD-----NGIGE-LEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPE-IL 128 (210)
T ss_pred HHhCCceEEeecccccccccCccc-----CCcch-HHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhccc-cc
Confidence 345699999999999999975321 22222 2344444444432 2 3 4689999999999999999876 44
Q ss_pred ceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHH
Q 044899 91 GLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFL 170 (299)
Q Consensus 91 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (299)
..+.+.+.... + +
T Consensus 129 ~~is~~p~~~~--~-----------------------d------------------------------------------ 141 (210)
T COG2945 129 VFISILPPINA--Y-----------------------D------------------------------------------ 141 (210)
T ss_pred ceeeccCCCCc--h-----------------------h------------------------------------------
Confidence 44444443220 0 0
Q ss_pred HHHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHh
Q 044899 171 QAINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLM 245 (299)
Q Consensus 171 ~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 245 (299)
...+....+|.++|+|+.|.+++....+...-. ...+++.+++++||++ .+-..+.+.|.+||.
T Consensus 142 ---------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~~~~i~i~~a~HFF~-gKl~~l~~~i~~~l~ 205 (210)
T COG2945 142 ---------FSFLAPCPSPGLVIQGDADDVVDLVAVLKWQES-IKITVITIPGADHFFH-GKLIELRDTIADFLE 205 (210)
T ss_pred ---------hhhccCCCCCceeEecChhhhhcHHHHHHhhcC-CCCceEEecCCCceec-ccHHHHHHHHHHHhh
Confidence 011224578999999999988854433333223 3688999999999777 777789999999985
No 82
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.42 E-value=1.7e-12 Score=96.93 Aligned_cols=222 Identities=10% Similarity=0.054 Sum_probs=122.6
Q ss_pred CHhhHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhC----CCcEEEEeeChhHHHHHHHHH
Q 044899 10 CPDAASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAE-QVAEVLDFFG----LEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 10 ~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~-dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
|...+.++ ..||.|.++|+||.|.|+.... ....+.+.|++. |+.+.++.++ ..+.+.||||+||.+.-.+.
T Consensus 46 YRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~-~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~- 123 (281)
T COG4757 46 YRRFAAAAAKAGFEVLTFDYRGIGQSRPASL-SGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG- 123 (281)
T ss_pred hHHHHHHhhccCceEEEEecccccCCCcccc-ccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-
Confidence 34444444 4699999999999999976532 234466777653 6666665544 45899999999998765554
Q ss_pred hhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc
Q 044899 84 KYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS 163 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
+++ ++.+....+....-..+........+..+....+ . .+ . ....++...+........-...+.++++......
T Consensus 124 ~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~-p-~l-t-~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y 198 (281)
T COG4757 124 QHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVG-P-PL-T-FWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRY 198 (281)
T ss_pred cCc-ccceeeEeccccccccchhhhhcccceeeccccc-c-ch-h-hccccCcHhhcCCCccCcchHHHHHHHHhcCccc
Confidence 455 5555555555444333222210000000000000 0 00 0 1112233332222211234455555555443211
Q ss_pred hhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcC----CCCcccccCh-HhH
Q 044899 164 LNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQA----CGSLVTEEYP-LAM 236 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~----~gH~~~~e~p-~~~ 236 (299)
..... ....+.+..+.+++|++++...+|+.+| ..+.+.....+...+...++. -||+-...++ |.+
T Consensus 199 ~fddp------~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Eal 272 (281)
T COG4757 199 YFDDP------AMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEAL 272 (281)
T ss_pred cccCh------hHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHH
Confidence 10000 0122345667889999999999999994 334555656644555555554 4999888777 667
Q ss_pred HHHHHHHH
Q 044899 237 LIPIELFL 244 (299)
Q Consensus 237 ~~~i~~fl 244 (299)
.+.+.+|+
T Consensus 273 wk~~L~w~ 280 (281)
T COG4757 273 WKEMLGWF 280 (281)
T ss_pred HHHHHHhh
Confidence 77777665
No 83
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.41 E-value=3.1e-12 Score=101.26 Aligned_cols=222 Identities=13% Similarity=0.146 Sum_probs=85.4
Q ss_pred CHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------CCCcEEEEeeChhHHHHHH
Q 044899 10 CPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF--------GLEKVLCLGVTAGAYILTL 80 (299)
Q Consensus 10 ~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--------~~~~~~lvGhS~Gg~ia~~ 80 (299)
.+.+++.|. .+|.|+-+-++-... ..+..+++.-++||.++++.+ +.++|+|+|||.|+.-+++
T Consensus 52 ~~~La~aL~~~~wsl~q~~LsSSy~-------G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~ 124 (303)
T PF08538_consen 52 LPDLAEALEETGWSLFQVQLSSSYS-------GWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLH 124 (303)
T ss_dssp HHHHHHHHT-TT-EEEEE--GGGBT-------TS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHH
T ss_pred HHHHHHHhccCCeEEEEEEecCccC-------CcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHH
Confidence 345666675 499999998765211 134568888888888887754 3458999999999999999
Q ss_pred HHHhhh-----hhhcceEEeccCCCCCchhHHHHH-HHHHHHHHhhc--chhHHHHHHHhhhhhhcccCCCCCCchHHHH
Q 044899 81 FAMKYQ-----ERVLGLILVSPICKAPSWTEWLYN-KVLMNLLYFYG--MCGVLKECLLQRYFSKEFRSGEHGAESDIIQ 152 (299)
Q Consensus 81 ~a~~~p-----~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (299)
|+.... ..|+++||-+|............. ......+.... ..+--.+.++...+...... ..+-...
T Consensus 125 Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~~~~~~~~~----~~PiTA~ 200 (303)
T PF08538_consen 125 YLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPREFTPLVFY----DTPITAY 200 (303)
T ss_dssp HHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG----GGTTT-----SS---HH
T ss_pred HHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeeccccccccC----CCcccHH
Confidence 998652 569999999998765443322111 11111110000 00000011111111111100 0122223
Q ss_pred HHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchhH---HHHHhhCCC------ceeEEEEcC
Q 044899 153 ACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTESL---HMSATMGSK------NCGLVEVQA 223 (299)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~---~~~~~~~~~------~~~~~~~~~ 223 (299)
++..... +.+--.++........+...+..+++|+|++.+++|.++|... .+.+++... ...-.++||
T Consensus 201 Rf~SL~s---~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~G 277 (303)
T PF08538_consen 201 RFLSLAS---PGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPG 277 (303)
T ss_dssp HHHT-S----SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------------------
T ss_pred HHHhccC---CCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccccccccccccccc
Confidence 3332222 2344444455555567778899999999999999999985332 222222211 122458999
Q ss_pred CCCcccccCh----HhHHHHHHHHHh
Q 044899 224 CGSLVTEEYP----LAMLIPIELFLM 245 (299)
Q Consensus 224 ~gH~~~~e~p----~~~~~~i~~fl~ 245 (299)
++|.+--+.. +.+.+.+..||+
T Consensus 278 A~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 278 ASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------
T ss_pred ccccccccccccccccccccccccCC
Confidence 9997764332 247777777774
No 84
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.40 E-value=2.2e-11 Score=110.59 Aligned_cols=217 Identities=13% Similarity=0.071 Sum_probs=117.9
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--------------------CCcEEEEeeCh
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG--------------------LEKVLCLGVTA 73 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--------------------~~~~~lvGhS~ 73 (299)
..++.+||.|+.+|.||+|.|+... ..+. .+-.+|..++|+.+. .++|.++|.|+
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~----~~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY 347 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCP----TTGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSY 347 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcC----ccCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcH
Confidence 3466789999999999999996431 1122 445677777777765 35899999999
Q ss_pred hHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcc----hhHHHHHHHhhhhhhcccCCCCCCchH
Q 044899 74 GAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGM----CGVLKECLLQRYFSKEFRSGEHGAESD 149 (299)
Q Consensus 74 Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (299)
||.+++.+|...|+.++++|.+++... +........... ...+. ...+......+........ ...+
T Consensus 348 ~G~~~~~aAa~~pp~LkAIVp~a~is~---~yd~yr~~G~~~--~~~g~~ged~d~l~~~~~~r~~~~~~~~----~~~~ 418 (767)
T PRK05371 348 LGTLPNAVATTGVEGLETIIPEAAISS---WYDYYRENGLVR--APGGYQGEDLDVLAELTYSRNLLAGDYL----RHNE 418 (767)
T ss_pred HHHHHHHHHhhCCCcceEEEeeCCCCc---HHHHhhcCCcee--ccCCcCCcchhhHHHHhhhcccCcchhh----cchH
Confidence 999999999998889999999876533 111100000000 00000 0000011101000000000 0011
Q ss_pred HHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCC--CceeEEEEcCCC
Q 044899 150 IIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGS--KNCGLVEVQACG 225 (299)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~--~~~~~~~~~~~g 225 (299)
..+.....+.... ......+..+....++...+.++++|+|+|+|..|..++ .+.++.+.+.. ...++.+.+ ++
T Consensus 419 ~~~~~~~~~~~~~-~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~~-g~ 496 (767)
T PRK05371 419 ACEKLLAELTAAQ-DRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLHQ-GG 496 (767)
T ss_pred HHHHHHhhhhhhh-hhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEeC-CC
Confidence 1111100000000 000000111122345556778999999999999999983 56677776643 235565554 78
Q ss_pred Ccccc-cChHhHHHHHHHHHhh
Q 044899 226 SLVTE-EYPLAMLIPIELFLMG 246 (299)
Q Consensus 226 H~~~~-e~p~~~~~~i~~fl~~ 246 (299)
|.... ..+.++.+.+.+|++.
T Consensus 497 H~~~~~~~~~d~~e~~~~Wfd~ 518 (767)
T PRK05371 497 HVYPNNWQSIDFRDTMNAWFTH 518 (767)
T ss_pred ccCCCchhHHHHHHHHHHHHHh
Confidence 85433 3455677777777754
No 85
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.37 E-value=1.5e-11 Score=108.91 Aligned_cols=82 Identities=20% Similarity=0.201 Sum_probs=66.2
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL-----EKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
..++.+||.|+++|+||+|.|.... ..++ ...++|+.++++.+.. +++.++|||+||.+++.+|..+|++
T Consensus 47 ~~l~~~Gy~vv~~D~RG~g~S~g~~----~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~ 121 (550)
T TIGR00976 47 AWFVAQGYAVVIQDTRGRGASEGEF----DLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPA 121 (550)
T ss_pred HHHHhCCcEEEEEeccccccCCCce----EecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCc
Confidence 3456789999999999999997431 1223 5677888888887643 4899999999999999999999999
Q ss_pred hcceEEeccCCC
Q 044899 89 VLGLILVSPICK 100 (299)
Q Consensus 89 v~~lvl~~~~~~ 100 (299)
++++|..++...
T Consensus 122 l~aiv~~~~~~d 133 (550)
T TIGR00976 122 LRAIAPQEGVWD 133 (550)
T ss_pred eeEEeecCcccc
Confidence 999999887643
No 86
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.37 E-value=5.3e-11 Score=98.36 Aligned_cols=187 Identities=12% Similarity=0.055 Sum_probs=97.8
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCcEEEEeeChhHHHHHHHHHhhhhhhcce
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG---LEKVLCLGVTAGAYILTLFAMKYQERVLGL 92 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 92 (299)
+...|+.++++|.||.|.|.... ...+.+.+...+.+.+.... ..+|.++|.|+||.+|.++|..++++++++
T Consensus 214 l~~rGiA~LtvDmPG~G~s~~~~----l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~Rlkav 289 (411)
T PF06500_consen 214 LAPRGIAMLTVDMPGQGESPKWP----LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAV 289 (411)
T ss_dssp CHHCT-EEEEE--TTSGGGTTT-----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEE
T ss_pred HHhCCCEEEEEccCCCcccccCC----CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeE
Confidence 34689999999999999985321 11233455666666666544 348999999999999999999888999999
Q ss_pred EEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHH
Q 044899 93 ILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQA 172 (299)
Q Consensus 93 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (299)
|..++....-...... ....+....+. +...++... .........
T Consensus 290 V~~Ga~vh~~ft~~~~----------~~~~P~my~d~-LA~rlG~~~------------------------~~~~~l~~e 334 (411)
T PF06500_consen 290 VALGAPVHHFFTDPEW----------QQRVPDMYLDV-LASRLGMAA------------------------VSDESLRGE 334 (411)
T ss_dssp EEES---SCGGH-HHH----------HTTS-HHHHHH-HHHHCT-SC------------------------E-HHHHHHH
T ss_pred eeeCchHhhhhccHHH----------HhcCCHHHHHH-HHHHhCCcc------------------------CCHHHHHHH
Confidence 9999975432111110 01111111111 111111110 000011111
Q ss_pred Hhhccchhh--hh--ccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCC-CcccccChHhHHHHHHHHHhh
Q 044899 173 INERHDLTK--GL--KELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACG-SLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 173 ~~~~~~~~~--~l--~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~g-H~~~~e~p~~~~~~i~~fl~~ 246 (299)
+ ....+.. .+ .+..+|+|.+.|++|.++|......-.....+.+...++... |. .-+.-...+.+||+.
T Consensus 335 l-~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~gk~~~~~~~~~~~----gy~~al~~~~~Wl~~ 408 (411)
T PF06500_consen 335 L-NKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDGKALRIPSKPLHM----GYPQALDEIYKWLED 408 (411)
T ss_dssp G-GGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT-EEEEE-SSSHHH----HHHHHHHHHHHHHHH
T ss_pred H-HhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCCceeecCCCcccc----chHHHHHHHHHHHHH
Confidence 1 2233322 34 577899999999999999655443333333367777777544 32 234566777778764
No 87
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.36 E-value=5e-12 Score=106.38 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=63.1
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCcEEEEeeChhHHHHHHHHHhhhhhhcceE
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF------GLEKVLCLGVTAGAYILTLFAMKYQERVLGLI 93 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 93 (299)
+|+||++|++|+|.|..+. .......+++++.++++.+ +.++++||||||||.+|..++.++|++|.+|+
T Consensus 73 d~nVI~VDw~g~g~s~y~~----a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rIt 148 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPT----SAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRIT 148 (442)
T ss_pred CCEEEEEECCCcCCCCCcc----ccccHHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEE
Confidence 7999999999999875321 1223466777788877765 36799999999999999999999999999999
Q ss_pred EeccCCC
Q 044899 94 LVSPICK 100 (299)
Q Consensus 94 l~~~~~~ 100 (299)
+++|+..
T Consensus 149 gLDPAgP 155 (442)
T TIGR03230 149 GLDPAGP 155 (442)
T ss_pred EEcCCCC
Confidence 9999754
No 88
>PLN00021 chlorophyllase
Probab=99.34 E-value=3.2e-11 Score=98.50 Aligned_cols=84 Identities=14% Similarity=0.100 Sum_probs=55.4
Q ss_pred CHhhHhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHH-------hCCCcEEEEeeChhHHHH
Q 044899 10 CPDAASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDD---LAEQVAEVLDF-------FGLEKVLCLGVTAGAYIL 78 (299)
Q Consensus 10 ~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~---~~~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia 78 (299)
|..+...++ .||.|+++|++|++.+. ....+++ ..+.+.+.++. .+.++++++||||||.++
T Consensus 68 y~~l~~~Las~G~~VvapD~~g~~~~~-------~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA 140 (313)
T PLN00021 68 YSQLLQHIASHGFIVVAPQLYTLAGPD-------GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTA 140 (313)
T ss_pred HHHHHHHHHhCCCEEEEecCCCcCCCC-------chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHH
Confidence 344555554 58999999999975321 1122332 22222222222 234689999999999999
Q ss_pred HHHHHhhhh-----hhcceEEeccCCC
Q 044899 79 TLFAMKYQE-----RVLGLILVSPICK 100 (299)
Q Consensus 79 ~~~a~~~p~-----~v~~lvl~~~~~~ 100 (299)
+.+|.++++ ++.++|+++|...
T Consensus 141 ~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 141 FALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHhhccccccccceeeEEeeccccc
Confidence 999998874 5789999988643
No 89
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.32 E-value=3e-10 Score=92.97 Aligned_cols=192 Identities=15% Similarity=0.104 Sum_probs=100.9
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCC-------CC---------CCCCCHHHHHHHHHHHHHHhC------CCcEEEEee
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIY-------SD---------FPLLNVDDLAEQVAEVLDFFG------LEKVLCLGV 71 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~-------~~---------~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGh 71 (299)
......||.|+.+|.||+|....... .. ...+-+..+..|....++.+. .+++.+.|.
T Consensus 103 ~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~ 182 (320)
T PF05448_consen 103 LPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGG 182 (320)
T ss_dssp HHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred cccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEee
Confidence 34567899999999999993221100 00 011122334455555555442 248999999
Q ss_pred ChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHH
Q 044899 72 TAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDII 151 (299)
Q Consensus 72 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (299)
|+||.+++.+|+..+ +|++++...|+.......-.. -...+.... +..++.
T Consensus 183 SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~--------~~~~~~y~~-----~~~~~~--------------- 233 (320)
T PF05448_consen 183 SQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALEL--------RADEGPYPE-----IRRYFR--------------- 233 (320)
T ss_dssp THHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHH--------T--STTTHH-----HHHHHH---------------
T ss_pred cCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhc--------CCccccHHH-----HHHHHh---------------
Confidence 999999999999875 699999998865421100000 000000000 001111
Q ss_pred HHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCch--hHHHHHhhCCCceeEEEEcCCCCccc
Q 044899 152 QACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTE--SLHMSATMGSKNCGLVEVQACGSLVT 229 (299)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~~~~gH~~~ 229 (299)
..... .......+..+ ...|.....+.|+||+++-.|-.|.++|. .......+.. ..++.++|..||
T Consensus 234 -----~~d~~-~~~~~~v~~~L-~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~-~K~l~vyp~~~H--- 302 (320)
T PF05448_consen 234 -----WRDPH-HEREPEVFETL-SYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPG-PKELVVYPEYGH--- 302 (320)
T ss_dssp -----HHSCT-HCHHHHHHHHH-HTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--S-SEEEEEETT--S---
T ss_pred -----ccCCC-cccHHHHHHHH-hhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCC-CeeEEeccCcCC---
Confidence 00000 01111111111 34677788889999999999999999943 3344555554 589999999999
Q ss_pred ccChHhH-HHHHHHHHhh
Q 044899 230 EEYPLAM-LIPIELFLMG 246 (299)
Q Consensus 230 ~e~p~~~-~~~i~~fl~~ 246 (299)
|....+ .+...+||.+
T Consensus 303 -e~~~~~~~~~~~~~l~~ 319 (320)
T PF05448_consen 303 -EYGPEFQEDKQLNFLKE 319 (320)
T ss_dssp -STTHHHHHHHHHHHHHH
T ss_pred -CchhhHHHHHHHHHHhc
Confidence 444555 6777788765
No 90
>PRK11460 putative hydrolase; Provisional
Probab=99.29 E-value=9.8e-11 Score=92.11 Aligned_cols=103 Identities=13% Similarity=0.063 Sum_probs=71.5
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCC
Q 044899 64 EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGE 143 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (299)
++++|+|||+||.+++.++.++|+.+.++|.+++.... .. .
T Consensus 103 ~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~~--------------------~~--------------~----- 143 (232)
T PRK11460 103 SATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYAS--------------------LP--------------E----- 143 (232)
T ss_pred hhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccccc--------------------cc--------------c-----
Confidence 47999999999999999999999888877776552100 00 0
Q ss_pred CCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCC--ceeEE
Q 044899 144 HGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSK--NCGLV 219 (299)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~--~~~~~ 219 (299)
....++|+++++|++|.+++ .+..+.+.+... +++++
T Consensus 144 ---------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~ 184 (232)
T PRK11460 144 ---------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLD 184 (232)
T ss_pred ---------------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEE
Confidence 00136799999999999994 555666665432 47888
Q ss_pred EEcCCCCcccccChHhHHHHHHHHH
Q 044899 220 EVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 220 ~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
+++++||.+..+.-+.+.+.+.++|
T Consensus 185 ~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 185 IVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHc
Confidence 8999999876444444444444444
No 91
>PRK10162 acetyl esterase; Provisional
Probab=99.28 E-value=3.2e-10 Score=93.56 Aligned_cols=194 Identities=13% Similarity=0.076 Sum_probs=106.3
Q ss_pred hhHhhhh--cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH---HHHHHHHHhCC--CcEEEEeeChhHHHHHHHHHh
Q 044899 12 DAASLLL--HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAE---QVAEVLDFFGL--EKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 12 ~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~---dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.+...+. .|+.|+++|+|...+.. ....+++..+ .+.+..+.+++ ++++|+|+|+||.+++.++.+
T Consensus 102 ~~~~~la~~~g~~Vv~vdYrlape~~-------~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~ 174 (318)
T PRK10162 102 RIMRLLASYSGCTVIGIDYTLSPEAR-------FPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALW 174 (318)
T ss_pred HHHHHHHHHcCCEEEEecCCCCCCCC-------CCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHH
Confidence 3444444 38999999999764321 1123444333 33333445665 489999999999999999876
Q ss_pred h------hhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHH
Q 044899 85 Y------QERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVL 158 (299)
Q Consensus 85 ~------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
. +.++.++|++.|........... . .......+ ..+..+.+.+.+
T Consensus 175 ~~~~~~~~~~~~~~vl~~p~~~~~~~~s~~---~------~~~~~~~l--------------------~~~~~~~~~~~y 225 (318)
T PRK10162 175 LRDKQIDCGKVAGVLLWYGLYGLRDSVSRR---L------LGGVWDGL--------------------TQQDLQMYEEAY 225 (318)
T ss_pred HHhcCCCccChhheEEECCccCCCCChhHH---H------hCCCcccc--------------------CHHHHHHHHHHh
Confidence 4 25689999998865432110000 0 00000000 000011111100
Q ss_pred hcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCC--ceeEEEEcCCCCcccc-----c
Q 044899 159 DQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSK--NCGLVEVQACGSLVTE-----E 231 (299)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-----e 231 (299)
....... . ..+ . ......+.+--.|+++++|+.|...+.+..+.+.+... .+++++++|..|-+.. +
T Consensus 226 ~~~~~~~-~---~p~-~-~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~~~g~~H~f~~~~~~~~ 299 (318)
T PRK10162 226 LSNDADR-E---SPY-Y-CLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMD 299 (318)
T ss_pred CCCcccc-C---Ccc-c-CcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEEECCCceehhhccCchH
Confidence 0000000 0 000 0 00011121223589999999999998788888777543 4889999999995432 2
Q ss_pred ChHhHHHHHHHHHhhc
Q 044899 232 YPLAMLIPIELFLMGF 247 (299)
Q Consensus 232 ~p~~~~~~i~~fl~~~ 247 (299)
..++..+.+.+||++.
T Consensus 300 ~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 300 TADDALRDGAQFFTAQ 315 (318)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3445667777788653
No 92
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.24 E-value=1.4e-10 Score=90.74 Aligned_cols=154 Identities=13% Similarity=0.147 Sum_probs=89.3
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCC-CCC------CHHHHHHHHHHHHHHhC------CCcEEEEeeChhHHHHHHHHH
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDF-PLL------NVDDLAEQVAEVLDFFG------LEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~-~~~------~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
...||.|+++|+-+-........... ... ..+...+++.+.++.+. .+++.++|+||||.+++.++.
T Consensus 38 A~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~ 117 (218)
T PF01738_consen 38 AEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAA 117 (218)
T ss_dssp HHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHC
T ss_pred HhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhh
Confidence 45699999999865543111000000 000 12345566766666553 248999999999999999998
Q ss_pred hhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc
Q 044899 84 KYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS 163 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
+. +.+++.|..-+....
T Consensus 118 ~~-~~~~a~v~~yg~~~~-------------------------------------------------------------- 134 (218)
T PF01738_consen 118 RD-PRVDAAVSFYGGSPP-------------------------------------------------------------- 134 (218)
T ss_dssp CT-TTSSEEEEES-SSSG--------------------------------------------------------------
T ss_pred hc-cccceEEEEcCCCCC--------------------------------------------------------------
Confidence 77 578888887761000
Q ss_pred hhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhh--CCCceeEEEEcCCCCcccccCh------
Q 044899 164 LNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATM--GSKNCGLVEVQACGSLVTEEYP------ 233 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~--~~~~~~~~~~~~~gH~~~~e~p------ 233 (299)
........++++|+++++|++|+.++ ....+.+.+ .....++++++|++|-+.....
T Consensus 135 -------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~ 201 (218)
T PF01738_consen 135 -------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPA 201 (218)
T ss_dssp -------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HH
T ss_pred -------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHH
Confidence 01112234678999999999999983 344555555 2236899999999996665322
Q ss_pred --HhHHHHHHHHHhh
Q 044899 234 --LAMLIPIELFLMG 246 (299)
Q Consensus 234 --~~~~~~i~~fl~~ 246 (299)
++..+.+.+||++
T Consensus 202 aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 202 AAEDAWQRTLAFFKR 216 (218)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHh
Confidence 2244566777765
No 93
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.23 E-value=7.1e-10 Score=88.73 Aligned_cols=77 Identities=22% Similarity=0.195 Sum_probs=68.3
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 21 FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 21 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
|.||++.+||+|.|+.+. ...++....|.-+..++-.+|.+++.|-|-.||+.|+..+|..+|++|.|+-+--+...
T Consensus 189 FEVI~PSlPGygwSd~~s---k~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPS---KTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred EEEeccCCCCcccCcCCc---cCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 899999999999998764 34578889999999999999999999999999999999999999999998776655443
No 94
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.19 E-value=2.7e-10 Score=88.57 Aligned_cols=82 Identities=12% Similarity=0.151 Sum_probs=54.9
Q ss_pred cCcEEEEECCCCCCCCCCCC----CC--CCCCCCHHHHHHHHHHHHHHhCC--CcEEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 19 HNFCIYHIDASGHELGADEI----YS--DFPLLNVDDLAEQVAEVLDFFGL--EKVLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~----~~--~~~~~~~~~~~~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
.||.|+++|++|+|.+.... .. ........++.+.+..+.+..++ ++++|+|||+||.+++.++.++|+.+.
T Consensus 42 ~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~ 121 (212)
T TIGR01840 42 YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFA 121 (212)
T ss_pred CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhhe
Confidence 59999999999997543210 00 00011122222333333333333 489999999999999999999999999
Q ss_pred ceEEeccCCC
Q 044899 91 GLILVSPICK 100 (299)
Q Consensus 91 ~lvl~~~~~~ 100 (299)
+++.+++...
T Consensus 122 ~~~~~~g~~~ 131 (212)
T TIGR01840 122 GGASNAGLPY 131 (212)
T ss_pred EEEeecCCcc
Confidence 9988887653
No 95
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.18 E-value=8.6e-10 Score=86.52 Aligned_cols=168 Identities=13% Similarity=0.144 Sum_probs=109.7
Q ss_pred cccccccCHhhHhhhh-cCcEEEEECCCCC-CCCCCCCCCC--CC-----CCCHHHHHHHHHHHHHHhC------CCcEE
Q 044899 3 CFQGLFFCPDAASLLL-HNFCIYHIDASGH-ELGADEIYSD--FP-----LLNVDDLAEQVAEVLDFFG------LEKVL 67 (299)
Q Consensus 3 c~~~~~~~~~~~~~l~-~~~~vi~~D~~G~-G~S~~~~~~~--~~-----~~~~~~~~~dl~~~l~~l~------~~~~~ 67 (299)
||.-.-....+.+.++ .||.|+++|+-+. |.+....... .. ..+..+...|+.+.++.|. .+++.
T Consensus 36 i~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig 115 (236)
T COG0412 36 IFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIG 115 (236)
T ss_pred ccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEE
Confidence 3333333445555554 5999999999884 3332211000 00 1233677788888888774 34699
Q ss_pred EEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCc
Q 044899 68 CLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAE 147 (299)
Q Consensus 68 lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (299)
++|+||||.+++.++.+.| .|++.|..-+......
T Consensus 116 ~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~-------------------------------------------- 150 (236)
T COG0412 116 VVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADD-------------------------------------------- 150 (236)
T ss_pred EEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCc--------------------------------------------
Confidence 9999999999999998877 6888887776433111
Q ss_pred hHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCC--ceeEEEEcC
Q 044899 148 SDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSK--NCGLVEVQA 223 (299)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~ 223 (299)
.....++++|+|++.|+.|..++ ....+.+.+... ..++.++++
T Consensus 151 --------------------------------~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~g 198 (236)
T COG0412 151 --------------------------------TADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPG 198 (236)
T ss_pred --------------------------------ccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCC
Confidence 00123789999999999999984 344555555443 588999999
Q ss_pred CCCcccccC-----------hHhHHHHHHHHHhhc
Q 044899 224 CGSLVTEEY-----------PLAMLIPIELFLMGF 247 (299)
Q Consensus 224 ~gH~~~~e~-----------p~~~~~~i~~fl~~~ 247 (299)
+.|-++.+. .+.-.+.+.+|+++.
T Consensus 199 a~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 199 AGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred CccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 999766432 123456677777654
No 96
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.17 E-value=5.9e-10 Score=91.09 Aligned_cols=83 Identities=17% Similarity=0.214 Sum_probs=65.2
Q ss_pred hhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHH-----HHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 12 DAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLA-----EQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 12 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~-----~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
.+.-++..|+.|+.+|+++-..+.. ..++++++ +.+..+.+..+.+++.++|+|.||.++..+++.++
T Consensus 131 ~V~~l~~~g~~vfvIsw~nPd~~~~-------~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~ 203 (445)
T COG3243 131 LVRWLLEQGLDVFVISWRNPDASLA-------AKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMA 203 (445)
T ss_pred HHHHHHHcCCceEEEeccCchHhhh-------hccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhh
Confidence 3455678899999999999766632 34566655 45555666678889999999999999999999998
Q ss_pred hh-hcceEEeccCCCC
Q 044899 87 ER-VLGLILVSPICKA 101 (299)
Q Consensus 87 ~~-v~~lvl~~~~~~~ 101 (299)
.+ |++++++.+....
T Consensus 204 ~k~I~S~T~lts~~DF 219 (445)
T COG3243 204 AKRIKSLTLLTSPVDF 219 (445)
T ss_pred hcccccceeeecchhh
Confidence 87 9999999876543
No 97
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.13 E-value=4.2e-10 Score=83.56 Aligned_cols=136 Identities=14% Similarity=0.238 Sum_probs=88.4
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHH-Hhhhhhhcc
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFA-MKYQERVLG 91 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a-~~~p~~v~~ 91 (299)
+...+...++|-..|+ + ..+.+++.+.+.+.+..+. ++++|||||+|+..++.++ .....+|.+
T Consensus 19 l~~~l~~~~~V~~~~~------~--------~P~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g 83 (171)
T PF06821_consen 19 LERQLENSVRVEQPDW------D--------NPDLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAG 83 (171)
T ss_dssp HHHHHTTSEEEEEC--------T--------S--HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEE
T ss_pred HHHhCCCCeEEecccc------C--------CCCHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccE
Confidence 4555665677777666 1 2468888888888888764 5799999999999999999 667789999
Q ss_pred eEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHH
Q 044899 92 LILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQ 171 (299)
Q Consensus 92 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
++|++|+-.... . ..... . ..|.
T Consensus 84 ~lLVAp~~~~~~-~---------------~~~~~-----~-~~f~----------------------------------- 106 (171)
T PF06821_consen 84 ALLVAPFDPDDP-E---------------PFPPE-----L-DGFT----------------------------------- 106 (171)
T ss_dssp EEEES--SCGCH-H---------------CCTCG-----G-CCCT-----------------------------------
T ss_pred EEEEcCCCcccc-c---------------chhhh-----c-cccc-----------------------------------
Confidence 999999643100 0 00000 0 0000
Q ss_pred HHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCccccc
Q 044899 172 AINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEE 231 (299)
Q Consensus 172 ~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 231 (299)
......+.+|.++|.+++|+++ +.+.++++.+. ++++.++++||+...+
T Consensus 107 --------~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~---a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 107 --------PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG---AELIILGGGGHFNAAS 157 (171)
T ss_dssp --------TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT----EEEEETS-TTSSGGG
T ss_pred --------cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC---CCeEECCCCCCccccc
Confidence 0011234567799999999999 46677888776 8899999999976654
No 98
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.13 E-value=1e-10 Score=94.19 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=61.1
Q ss_pred hhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh------CCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 16 LLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF------GLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 16 ~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
++. .+|+|+++|++|++.+..+ ....++..+++++..+++.+ +.++++||||||||.+|..++.++|++
T Consensus 61 ll~~~~~nVi~vD~~~~~~~~y~----~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIGhSlGa~vAg~~a~~~~~~ 136 (275)
T cd00707 61 YLSRGDYNVIVVDWGRGANPNYP----QAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIGHSLGAHVAGFAGKRLNGK 136 (275)
T ss_pred HHhcCCCEEEEEECccccccChH----HHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEEecHHHHHHHHHHHHhcCc
Confidence 444 5899999999998433210 11234555666666666654 346899999999999999999999999
Q ss_pred hcceEEeccCCC
Q 044899 89 VLGLILVSPICK 100 (299)
Q Consensus 89 v~~lvl~~~~~~ 100 (299)
|.++++++|+..
T Consensus 137 v~~iv~LDPa~p 148 (275)
T cd00707 137 LGRITGLDPAGP 148 (275)
T ss_pred cceeEEecCCcc
Confidence 999999998754
No 99
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.13 E-value=1.1e-09 Score=85.31 Aligned_cols=123 Identities=20% Similarity=0.266 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHh-----CCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhc
Q 044899 47 VDDLAEQVAEVLDFF-----GLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYG 121 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (299)
+...++.+.++++.. ..++++|.|.|.||++++.++.++|+.+.++|.+++........
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~---------------- 146 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESEL---------------- 146 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCC----------------
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccc----------------
Confidence 334445555555542 33589999999999999999999999999999999854321000
Q ss_pred chhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC
Q 044899 122 MCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH 201 (299)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~ 201 (299)
. +.... .-++|++++||++|.++
T Consensus 147 --------------~-----------------------------------------~~~~~--~~~~pi~~~hG~~D~vv 169 (216)
T PF02230_consen 147 --------------E-----------------------------------------DRPEA--LAKTPILIIHGDEDPVV 169 (216)
T ss_dssp --------------H-----------------------------------------CCHCC--CCTS-EEEEEETT-SSS
T ss_pred --------------c-----------------------------------------ccccc--cCCCcEEEEecCCCCcc
Confidence 0 00000 11689999999999999
Q ss_pred c--hhHHHHHhhCCC--ceeEEEEcCCCCcccccChHhHHHHHHHHHhh
Q 044899 202 T--ESLHMSATMGSK--NCGLVEVQACGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 202 ~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
+ .++...+.+... +++++.++++||-.. .+..+.+.+||++
T Consensus 170 p~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 170 PFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp THHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 4 455555555333 588999999999664 5566778888865
No 100
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.11 E-value=1.7e-09 Score=87.44 Aligned_cols=80 Identities=13% Similarity=0.131 Sum_probs=59.6
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-----CcEEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL-----EKVLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
+..+||.|+..|.||.|.|.... ......-++|..++|+.+.. .+|.++|.|.+|..++.+|+..|..++
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~-----~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~Lk 127 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEF-----DPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLK 127 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B------TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEE
T ss_pred HHhCCCEEEEECCcccccCCCcc-----ccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCce
Confidence 67889999999999999996432 11155567777777777643 379999999999999999998888999
Q ss_pred ceEEeccCCC
Q 044899 91 GLILVSPICK 100 (299)
Q Consensus 91 ~lvl~~~~~~ 100 (299)
+++...+...
T Consensus 128 Ai~p~~~~~d 137 (272)
T PF02129_consen 128 AIVPQSGWSD 137 (272)
T ss_dssp EEEEESE-SB
T ss_pred EEEecccCCc
Confidence 9999876543
No 101
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.11 E-value=4.1e-09 Score=79.19 Aligned_cols=143 Identities=15% Similarity=0.212 Sum_probs=85.7
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhH
Q 044899 46 NVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGV 125 (299)
Q Consensus 46 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (299)
......+.+.++++....+.+.|+|.||||+.|..+|.+++ +++ ||++|+.......
T Consensus 41 ~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l-------------------- 97 (187)
T PF05728_consen 41 FPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELL-------------------- 97 (187)
T ss_pred CHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHH--------------------
Confidence 46667788889999988778999999999999999999885 444 9999976532110
Q ss_pred HHHHHHhhhhhhcccCCCC---CCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc
Q 044899 126 LKECLLQRYFSKEFRSGEH---GAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT 202 (299)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~ 202 (299)
..+++........ ...+..... . ..+......-..+++++.++.|.+++
T Consensus 98 ------~~~iG~~~~~~~~e~~~~~~~~~~~----------------l------~~l~~~~~~~~~~~lvll~~~DEvLd 149 (187)
T PF05728_consen 98 ------QDYIGEQTNPYTGESYELTEEHIEE----------------L------KALEVPYPTNPERYLVLLQTGDEVLD 149 (187)
T ss_pred ------HHhhCccccCCCCccceechHhhhh----------------c------ceEeccccCCCccEEEEEecCCcccC
Confidence 0111110000000 000000000 0 00000012335689999999999997
Q ss_pred hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHH
Q 044899 203 ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFL 244 (299)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 244 (299)
. +....... +...++.+|++|-+ ++-++....|.+|+
T Consensus 150 ~-~~a~~~~~--~~~~~i~~ggdH~f--~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 150 Y-REAVAKYR--GCAQIIEEGGDHSF--QDFEEYLPQIIAFL 186 (187)
T ss_pred H-HHHHHHhc--CceEEEEeCCCCCC--ccHHHHHHHHHHhh
Confidence 5 33344444 45555667889954 35667777888886
No 102
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.10 E-value=4.5e-08 Score=78.43 Aligned_cols=85 Identities=24% Similarity=0.291 Sum_probs=68.2
Q ss_pred hhcCcEEEEECCCCCCCCCCCCC--CCCCCCCHHHHHHHHHHHHHHhC------CCcEEEEeeChhHHHHHHHHHhhh--
Q 044899 17 LLHNFCIYHIDASGHELGADEIY--SDFPLLNVDDLAEQVAEVLDFFG------LEKVLCLGVTAGAYILTLFAMKYQ-- 86 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p-- 86 (299)
+..++.|+++.+.||-.+..... .+...+++++.++-..++++.+- ..+++|+|||+|++++++++.+++
T Consensus 29 l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~ 108 (266)
T PF10230_consen 29 LNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDL 108 (266)
T ss_pred CCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhcccc
Confidence 35799999999999976654310 13567999999988888777653 347999999999999999999998
Q ss_pred -hhhcceEEeccCCCC
Q 044899 87 -ERVLGLILVSPICKA 101 (299)
Q Consensus 87 -~~v~~lvl~~~~~~~ 101 (299)
.+|.+++++-|....
T Consensus 109 ~~~V~~~~lLfPTi~~ 124 (266)
T PF10230_consen 109 KFRVKKVILLFPTIED 124 (266)
T ss_pred CCceeEEEEeCCcccc
Confidence 789999999887643
No 103
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.08 E-value=1.9e-09 Score=83.89 Aligned_cols=81 Identities=22% Similarity=0.290 Sum_probs=52.3
Q ss_pred Hhhhh-cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----hCCCcEEEEeeChhHHHHHHHHHhhhh
Q 044899 14 ASLLL-HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF-----FGLEKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 14 ~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-----l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
..++. .|+.|+.+|+|=..+. .....+++..+.+..+++. .+.++++|+|+|-||.+++.++.+..+
T Consensus 22 ~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~ 94 (211)
T PF07859_consen 22 ARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARD 94 (211)
T ss_dssp HHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhh
Confidence 33443 6999999999954211 1122344444444444444 334589999999999999999987655
Q ss_pred h----hcceEEeccCCCC
Q 044899 88 R----VLGLILVSPICKA 101 (299)
Q Consensus 88 ~----v~~lvl~~~~~~~ 101 (299)
. ++++++++|....
T Consensus 95 ~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 95 RGLPKPKGIILISPWTDL 112 (211)
T ss_dssp TTTCHESEEEEESCHSST
T ss_pred hcccchhhhhcccccccc
Confidence 3 8999999996543
No 104
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.07 E-value=3.2e-09 Score=81.56 Aligned_cols=190 Identities=9% Similarity=0.053 Sum_probs=111.0
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCC--CCCCC---------------CCCCHHHHHHHHHHHHHHh------CCCcEEEE
Q 044899 13 AASLLLHNFCIYHIDASGHELGADE--IYSDF---------------PLLNVDDLAEQVAEVLDFF------GLEKVLCL 69 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~--~~~~~---------------~~~~~~~~~~dl~~~l~~l------~~~~~~lv 69 (299)
+......||.|+.+|.||.|.|... .++.. ..|-+.....|+...++.+ .-+++.+.
T Consensus 102 ~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~ 181 (321)
T COG3458 102 MLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVT 181 (321)
T ss_pred cccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEe
Confidence 4445578999999999999987331 11111 1122223334444444432 34589999
Q ss_pred eeChhHHHHHHHHHhhhhhhcceEEeccCCCCCc-hhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCch
Q 044899 70 GVTAGAYILTLFAMKYQERVLGLILVSPICKAPS-WTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAES 148 (299)
Q Consensus 70 GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (299)
|.|.||.+++..++..| ++++++.+-|....-. +.... ..
T Consensus 182 G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~~--------------------------------------~~ 222 (321)
T COG3458 182 GGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIELA--------------------------------------TE 222 (321)
T ss_pred ccccCchhhhhhhhcCh-hhhcccccccccccchhheeec--------------------------------------cc
Confidence 99999999999998775 7999998888654211 11000 00
Q ss_pred HHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCC
Q 044899 149 DIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGS 226 (299)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH 226 (299)
+-...+...+.+..+. -...+..+ ...|.......+++|+|+..|-.|.+++ .....+..+.. ..++.+++.-+|
T Consensus 223 ~~ydei~~y~k~h~~~-e~~v~~TL-~yfD~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~-~K~i~iy~~~aH 299 (321)
T COG3458 223 GPYDEIQTYFKRHDPK-EAEVFETL-SYFDIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTT-SKTIEIYPYFAH 299 (321)
T ss_pred CcHHHHHHHHHhcCch-HHHHHHHH-hhhhhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccC-CceEEEeecccc
Confidence 1111111112221111 11111111 2356667777899999999999999994 33344555553 467777877667
Q ss_pred cccccChHhHHHHHHHHHhhc
Q 044899 227 LVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 227 ~~~~e~p~~~~~~i~~fl~~~ 247 (299)
.- -|.-..+.+..|++.+
T Consensus 300 e~---~p~~~~~~~~~~l~~l 317 (321)
T COG3458 300 EG---GPGFQSRQQVHFLKIL 317 (321)
T ss_pred cc---CcchhHHHHHHHHHhh
Confidence 43 3444556677777654
No 105
>COG0400 Predicted esterase [General function prediction only]
Probab=99.02 E-value=5e-09 Score=79.74 Aligned_cols=118 Identities=16% Similarity=0.183 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHhCC--CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHH
Q 044899 49 DLAEQVAEVLDFFGL--EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVL 126 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (299)
.+++.+..+.++.++ ++++++|+|-||++++.+..++|+.++++|++++........
T Consensus 82 ~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~--------------------- 140 (207)
T COG0400 82 KLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL--------------------- 140 (207)
T ss_pred HHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc---------------------
Confidence 344455555566666 699999999999999999999999999999999865432110
Q ss_pred HHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hh
Q 044899 127 KECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ES 204 (299)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~ 204 (299)
.-..-..|+++++|+.|++++ .+
T Consensus 141 -------------------------------------------------------~~~~~~~pill~hG~~Dpvvp~~~~ 165 (207)
T COG0400 141 -------------------------------------------------------LPDLAGTPILLSHGTEDPVVPLALA 165 (207)
T ss_pred -------------------------------------------------------ccccCCCeEEEeccCcCCccCHHHH
Confidence 000236799999999999983 45
Q ss_pred HHHHHhhCCC--ceeEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 205 LHMSATMGSK--NCGLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 205 ~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
.++.+.+.+. +++.++++ +||-.. .+..+.+.+|+...
T Consensus 166 ~~l~~~l~~~g~~v~~~~~~-~GH~i~----~e~~~~~~~wl~~~ 205 (207)
T COG0400 166 EALAEYLTASGADVEVRWHE-GGHEIP----PEELEAARSWLANT 205 (207)
T ss_pred HHHHHHHHHcCCCEEEEEec-CCCcCC----HHHHHHHHHHHHhc
Confidence 5555555333 57788887 999655 44555666677653
No 106
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.02 E-value=8.9e-09 Score=83.12 Aligned_cols=218 Identities=12% Similarity=0.010 Sum_probs=111.4
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHH----------HHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLA----------EQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~----------~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.+++.+|+..+.+..|-||.-.+.........++.|+. ..|..+++..|..++.+.|.||||.+|...|.
T Consensus 115 ~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 115 RPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGYGPLGLTGISMGGHMAALAAS 194 (348)
T ss_pred hHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCCCceEEEEechhHhhHHhhhh
Confidence 45677899999999999996543221111122333322 23344455558889999999999999999999
Q ss_pred hhhhhhcceEEeccCCCCCchhHHHHHHHHHH-HHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhccc
Q 044899 84 KYQERVLGLILVSPICKAPSWTEWLYNKVLMN-LLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQ 162 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (299)
..|..+..+-++++......+..-........ .+..........+. . ....... ........ .-....
T Consensus 195 ~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~~~~~~~~-~-~~~~~~~-------~~~~~~~~--~~~~~~ 263 (348)
T PF09752_consen 195 NWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFEDTVYEEE-I-SDIPAQN-------KSLPLDSM--EERRRD 263 (348)
T ss_pred cCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhcccchhhh-h-cccccCc-------ccccchhh--ccccch
Confidence 99987777766766444333322211110000 00000000000000 0 0000000 00000000 000001
Q ss_pred chhHHHHHHHHhhccchhhhhccC-CcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcc-cccChHhHHH
Q 044899 163 SLNVMHFLQAINERHDLTKGLKEL-QCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLV-TEEYPLAMLI 238 (299)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~l~~i-~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~ 238 (299)
.+........+....++...-..+ .-.+.++.+++|.+++ ....+.+..+ ++++.+++ +||.. ++-+.+.+.+
T Consensus 264 ~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~WP--GsEvR~l~-gGHVsA~L~~q~~fR~ 340 (348)
T PF09752_consen 264 REALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRHGVLSLQEIWP--GSEVRYLP-GGHVSAYLLHQEAFRQ 340 (348)
T ss_pred HHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechhhcchHHHhCC--CCeEEEec-CCcEEEeeechHHHHH
Confidence 111111111111111221111111 2238889999999994 4556777677 79999997 59954 4577888999
Q ss_pred HHHHHHh
Q 044899 239 PIELFLM 245 (299)
Q Consensus 239 ~i~~fl~ 245 (299)
.|.+-++
T Consensus 341 AI~Daf~ 347 (348)
T PF09752_consen 341 AIYDAFE 347 (348)
T ss_pred HHHHHhh
Confidence 8887654
No 107
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.01 E-value=1.7e-08 Score=72.77 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=92.5
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcc
Q 044899 43 PLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGM 122 (299)
Q Consensus 43 ~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (299)
....++++++.+.+.+... -++++||+||+|+.+++.++.+....|.|++|++|+-...... +
T Consensus 39 ~~P~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~-~--------------- 101 (181)
T COG3545 39 EAPVLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEI-R--------------- 101 (181)
T ss_pred CCCCHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCcccccc-c---------------
Confidence 3457888888888888877 4579999999999999999988877899999999864321100 0
Q ss_pred hhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC-
Q 044899 123 CGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH- 201 (299)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~- 201 (299)
. ... ..|.. .....+.-|.+++..++|+++
T Consensus 102 ~----~~~--~tf~~-------------------------------------------~p~~~lpfps~vvaSrnDp~~~ 132 (181)
T COG3545 102 P----KHL--MTFDP-------------------------------------------IPREPLPFPSVVVASRNDPYVS 132 (181)
T ss_pred h----hhc--cccCC-------------------------------------------CccccCCCceeEEEecCCCCCC
Confidence 0 000 00000 011245678999999999999
Q ss_pred -chhHHHHHhhCCCceeEEEEcCCCCcccc---cChHhHHHHHHHHHhh
Q 044899 202 -TESLHMSATMGSKNCGLVEVQACGSLVTE---EYPLAMLIPIELFLMG 246 (299)
Q Consensus 202 -~~~~~~~~~~~~~~~~~~~~~~~gH~~~~---e~p~~~~~~i~~fl~~ 246 (299)
+.++.+++... ..++.+.++||+--. ....+....+.+|+.+
T Consensus 133 ~~~a~~~a~~wg---s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 133 YEHAEDLANAWG---SALVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred HHHHHHHHHhcc---HhheecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 45666666665 788899899995432 3445556666666654
No 108
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.01 E-value=6.1e-09 Score=102.07 Aligned_cols=85 Identities=18% Similarity=0.074 Sum_probs=71.0
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEeeChhHHHHHHHHHhh--
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL-EKVLCLGVTAGAYILTLFAMKY-- 85 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~-- 85 (299)
.|..+...+..+++|+++|++|+|.+. ...++++++++++.+.++.+.. ++++++||||||.+|.++|.+.
T Consensus 1083 ~~~~l~~~l~~~~~v~~~~~~g~~~~~------~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~ 1156 (1296)
T PRK10252 1083 QFSVLSRYLDPQWSIYGIQSPRPDGPM------QTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRA 1156 (1296)
T ss_pred HHHHHHHhcCCCCcEEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHH
Confidence 355677778889999999999998552 2357999999999999988764 4899999999999999999864
Q ss_pred -hhhhcceEEeccCC
Q 044899 86 -QERVLGLILVSPIC 99 (299)
Q Consensus 86 -p~~v~~lvl~~~~~ 99 (299)
++++..++++++..
T Consensus 1157 ~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1157 RGEEVAFLGLLDTWP 1171 (1296)
T ss_pred cCCceeEEEEecCCC
Confidence 67899999998754
No 109
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.00 E-value=6.2e-09 Score=76.77 Aligned_cols=161 Identities=15% Similarity=0.158 Sum_probs=103.6
Q ss_pred hHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhhh-
Q 044899 13 AASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKYQ- 86 (299)
Q Consensus 13 ~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p- 86 (299)
+...| .+|+.|+.+|-+-|=.+ ..+.++.+.|+..++++. +.++++|+|+|+|+-+.-....+.|
T Consensus 21 ~a~~l~~~G~~VvGvdsl~Yfw~---------~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~ 91 (192)
T PF06057_consen 21 IAEALAKQGVPVVGVDSLRYFWS---------ERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPA 91 (192)
T ss_pred HHHHHHHCCCeEEEechHHHHhh---------hCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCH
Confidence 44444 56999999998887544 346777788887777654 6779999999999988777776665
Q ss_pred ---hhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccc
Q 044899 87 ---ERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQS 163 (299)
Q Consensus 87 ---~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (299)
++|..++|+++.....-.. -+..|+......
T Consensus 92 ~~r~~v~~v~Ll~p~~~~dFei------------------------hv~~wlg~~~~~---------------------- 125 (192)
T PF06057_consen 92 ALRARVAQVVLLSPSTTADFEI------------------------HVSGWLGMGGDD---------------------- 125 (192)
T ss_pred HHHhheeEEEEeccCCcceEEE------------------------EhhhhcCCCCCc----------------------
Confidence 4688999999865432111 011122211100
Q ss_pred hhHHHHHHHHhhccchhhhhccCC-cceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHH
Q 044899 164 LNVMHFLQAINERHDLTKGLKELQ-CKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIEL 242 (299)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~l~~i~-~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 242 (299)
...+....+.+++ .|++.|+|+++.-. ....+...+++.+.+| +||.+- ++.+.+++.|.+
T Consensus 126 -----------~~~~~~pei~~l~~~~v~CiyG~~E~d~-----~cp~l~~~~~~~i~lp-GgHHfd-~dy~~La~~Il~ 187 (192)
T PF06057_consen 126 -----------AAYPVIPEIAKLPPAPVQCIYGEDEDDS-----LCPSLRQPGVEVIALP-GGHHFD-GDYDALAKRILD 187 (192)
T ss_pred -----------ccCCchHHHHhCCCCeEEEEEcCCCCCC-----cCccccCCCcEEEEcC-CCcCCC-CCHHHHHHHHHH
Confidence 0013334444554 59999999987542 1123444579999999 567444 667778888777
Q ss_pred HHhh
Q 044899 243 FLMG 246 (299)
Q Consensus 243 fl~~ 246 (299)
-++.
T Consensus 188 ~l~~ 191 (192)
T PF06057_consen 188 ALKA 191 (192)
T ss_pred HHhc
Confidence 6653
No 110
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.99 E-value=2.7e-10 Score=88.14 Aligned_cols=49 Identities=20% Similarity=0.378 Sum_probs=36.8
Q ss_pred HHHHHHHHHHh-C--CCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 51 AEQVAEVLDFF-G--LEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 51 ~~dl~~~l~~l-~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
.+...+++... . .+++.|+|.|.||-+|+.+|..+| .|+++|.+++...
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 34444445443 2 258999999999999999999998 7999999998654
No 111
>PRK10115 protease 2; Provisional
Probab=98.96 E-value=1.2e-08 Score=92.34 Aligned_cols=176 Identities=11% Similarity=0.045 Sum_probs=105.7
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCCCC---C-CCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEeeChhHHHHHHHHHh
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGADE---I-YSDFPLLNVDDLAEQVAEVLDFF--GLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~~~---~-~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
+....++.+||.|+.++.||-|+=... . .......+++|+++.+..+++.- ..+++.+.|.|.||+++..++.+
T Consensus 465 ~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~ 544 (686)
T PRK10115 465 FSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQ 544 (686)
T ss_pred HHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhc
Confidence 345678889999999999996543211 0 01122356777777777666552 23489999999999999999999
Q ss_pred hhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccch
Q 044899 85 YQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSL 164 (299)
Q Consensus 85 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (299)
+|++++++|...|......... ...+.... . ....+ +... +++.
T Consensus 545 ~Pdlf~A~v~~vp~~D~~~~~~------------~~~~p~~~-~-~~~e~-G~p~-------~~~~-------------- 588 (686)
T PRK10115 545 RPELFHGVIAQVPFVDVVTTML------------DESIPLTT-G-EFEEW-GNPQ-------DPQY-------------- 588 (686)
T ss_pred ChhheeEEEecCCchhHhhhcc------------cCCCCCCh-h-HHHHh-CCCC-------CHHH--------------
Confidence 9999999999988654211100 00000000 0 00000 0000 0111
Q ss_pred hHHHHHHHHhhccchhhhhccCCcc-eEEEecCCCCCCc--hhHHHHHhhCCC--ceeEEEE---cCCCCcc
Q 044899 165 NVMHFLQAINERHDLTKGLKELQCK-TLIFVGESSPFHT--ESLHMSATMGSK--NCGLVEV---QACGSLV 228 (299)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~~~--~~~~~~~~~~~~--~~~~~~~---~~~gH~~ 228 (299)
..++ ........+.+++.| +|+++|.+|.-|+ ++.++..++... ..+++++ +++||..
T Consensus 589 --~~~l----~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 589 --YEYM----KSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGG 654 (686)
T ss_pred --HHHH----HHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCCC
Confidence 1111 112333455677899 5677999999883 566666666432 4567777 8999974
No 112
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.96 E-value=7.4e-08 Score=73.16 Aligned_cols=184 Identities=14% Similarity=0.208 Sum_probs=87.8
Q ss_pred CHhhHhhhh-cCcEEEEECCCCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHh
Q 044899 10 CPDAASLLL-HNFCIYHIDASGH-ELGADEIYSDFPLLNVDDLAEQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 10 ~~~~~~~l~-~~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
|..++..|+ .||+|+.||.-.| |.|+.. -..+++....+++..+++.+ |.+++-|+..|+.|-+|+..|.+
T Consensus 46 ~agLA~YL~~NGFhViRyDsl~HvGlSsG~----I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~ 121 (294)
T PF02273_consen 46 FAGLAEYLSANGFHVIRYDSLNHVGLSSGD----INEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAAD 121 (294)
T ss_dssp GHHHHHHHHTTT--EEEE---B-----------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTT
T ss_pred HHHHHHHHhhCCeEEEeccccccccCCCCC----hhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhc
Confidence 445555554 6999999999887 777643 44689999999988887766 66789999999999999999985
Q ss_pred hhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCC-------chHHHHHHHHH
Q 044899 85 YQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGA-------ESDIIQACRRV 157 (299)
Q Consensus 85 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 157 (299)
- .+.-+|..-+..... ..+.+.+ -..++.......+... ..+. .+...
T Consensus 122 i--~lsfLitaVGVVnlr--------~TLe~al-------------~~Dyl~~~i~~lp~dldfeGh~l~~~v--Fv~dc 176 (294)
T PF02273_consen 122 I--NLSFLITAVGVVNLR--------DTLEKAL-------------GYDYLQLPIEQLPEDLDFEGHNLGAEV--FVTDC 176 (294)
T ss_dssp S----SEEEEES--S-HH--------HHHHHHH-------------SS-GGGS-GGG--SEEEETTEEEEHHH--HHHHH
T ss_pred c--CcceEEEEeeeeeHH--------HHHHHHh-------------ccchhhcchhhCCCcccccccccchHH--HHHHH
Confidence 4 366666665433211 1111111 0011110000000000 0111 11111
Q ss_pred HhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChH
Q 044899 158 LDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPL 234 (299)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 234 (299)
+... .... ......++.+.+|++.+++.+|.++ ....++...+.....++..++|++|-+. |++-
T Consensus 177 ~e~~-w~~l----------~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl~ 243 (294)
T PF02273_consen 177 FEHG-WDDL----------DSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENLV 243 (294)
T ss_dssp HHTT--SSH----------HHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSHH
T ss_pred HHcC-Cccc----------hhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hChH
Confidence 1110 0000 1123456788999999999999999 3566777777777899999999999665 6653
No 113
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.94 E-value=6.7e-08 Score=74.92 Aligned_cols=85 Identities=16% Similarity=0.131 Sum_probs=64.2
Q ss_pred CHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-hCCCcEEEEeeChhHHHHHHHHHhh---
Q 044899 10 CPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF-FGLEKVLCLGVTAGAYILTLFAMKY--- 85 (299)
Q Consensus 10 ~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-l~~~~~~lvGhS~Gg~ia~~~a~~~--- 85 (299)
|..+...+..++.|+++|++|+|.+.. ...+++.+++.+...+.. .+..+++++|||+||.++..++.+.
T Consensus 15 ~~~~~~~l~~~~~v~~~~~~g~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~ 88 (212)
T smart00824 15 YARLAAALRGRRDVSALPLPGFGPGEP------LPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEAR 88 (212)
T ss_pred HHHHHHhcCCCccEEEecCCCCCCCCC------CCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhC
Confidence 455667777889999999999986542 134677777766555443 4456899999999999999999865
Q ss_pred hhhhcceEEeccCCC
Q 044899 86 QERVLGLILVSPICK 100 (299)
Q Consensus 86 p~~v~~lvl~~~~~~ 100 (299)
++.+.+++++++...
T Consensus 89 ~~~~~~l~~~~~~~~ 103 (212)
T smart00824 89 GIPPAAVVLLDTYPP 103 (212)
T ss_pred CCCCcEEEEEccCCC
Confidence 356889998887543
No 114
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.92 E-value=1e-07 Score=67.43 Aligned_cols=163 Identities=13% Similarity=0.059 Sum_probs=107.4
Q ss_pred HhhhhcCcEEEEECCCCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcc
Q 044899 14 ASLLLHNFCIYHIDASGHELGA--DEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~--~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
+.+...|+.|..|+++-.-.-. ...++.....-...+...+.++...+.-.+.++=|+||||-++..++......|++
T Consensus 37 ~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~ 116 (213)
T COG3571 37 AALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDG 116 (213)
T ss_pred HHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcce
Confidence 3344569999999987542211 11122222344566777888888888777999999999999999998776556999
Q ss_pred eEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHH
Q 044899 92 LILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQ 171 (299)
Q Consensus 92 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (299)
+++++-+...+...+.
T Consensus 117 L~clgYPfhppGKPe~---------------------------------------------------------------- 132 (213)
T COG3571 117 LVCLGYPFHPPGKPEQ---------------------------------------------------------------- 132 (213)
T ss_pred EEEecCccCCCCCccc----------------------------------------------------------------
Confidence 9999865443321110
Q ss_pred HHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccc----------cChHhHHHHHH
Q 044899 172 AINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTE----------EYPLAMLIPIE 241 (299)
Q Consensus 172 ~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----------e~p~~~~~~i~ 241 (299)
-..+.|..+++|++|.+|+.|.+-.. .+.+...-+...++++++++.|.+-- ++-...++.|.
T Consensus 133 ------~Rt~HL~gl~tPtli~qGtrD~fGtr-~~Va~y~ls~~iev~wl~~adHDLkp~k~vsgls~~~hL~~~A~~va 205 (213)
T COG3571 133 ------LRTEHLTGLKTPTLITQGTRDEFGTR-DEVAGYALSDPIEVVWLEDADHDLKPRKLVSGLSTADHLKTLAEQVA 205 (213)
T ss_pred ------chhhhccCCCCCeEEeecccccccCH-HHHHhhhcCCceEEEEeccCccccccccccccccHHHHHHHHHHHHH
Confidence 01234557899999999999998621 12233333336899999999995432 12234566777
Q ss_pred HHHhhc
Q 044899 242 LFLMGF 247 (299)
Q Consensus 242 ~fl~~~ 247 (299)
.|+.++
T Consensus 206 ~~~~~l 211 (213)
T COG3571 206 GWARRL 211 (213)
T ss_pred HHHhhc
Confidence 777654
No 115
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.88 E-value=4.1e-07 Score=78.59 Aligned_cols=80 Identities=13% Similarity=0.150 Sum_probs=59.5
Q ss_pred cCcEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCcEEEEeeChhHHHHHHHHHhhh----
Q 044899 19 HNFCIYHIDAS-GHELGADEIYSDFPLLNVDDLAEQVAEVLDF-------FGLEKVLCLGVTAGAYILTLFAMKYQ---- 86 (299)
Q Consensus 19 ~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p---- 86 (299)
+..+++.+|.| |+|.|..... ....+.++.++|+.++++. ++..+++|+|||+||.++..+|.+.-
T Consensus 120 ~~~~~l~iDqP~G~G~S~~~~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~ 197 (462)
T PTZ00472 120 NEAYVIYVDQPAGVGFSYADKA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNK 197 (462)
T ss_pred cccCeEEEeCCCCcCcccCCCC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhcc
Confidence 45789999975 9998865321 2245678889999988884 34579999999999999988887631
Q ss_pred ------hhhcceEEeccCCC
Q 044899 87 ------ERVLGLILVSPICK 100 (299)
Q Consensus 87 ------~~v~~lvl~~~~~~ 100 (299)
-.++++++-++...
T Consensus 198 ~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 198 KGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred ccCCceeeeEEEEEeccccC
Confidence 13678888887553
No 116
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.86 E-value=4.5e-07 Score=71.33 Aligned_cols=93 Identities=23% Similarity=0.247 Sum_probs=73.6
Q ss_pred CcccccccC----HhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC-CcEEEEeeChhHH
Q 044899 2 FCFQGLFFC----PDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL-EKVLCLGVTAGAY 76 (299)
Q Consensus 2 ~c~~~~~~~----~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~-~~~~lvGhS~Gg~ 76 (299)
.|||+...+ ..+...+.....|+.++.||.|.-. ....+++++++...+.|..... .+++|+|||+||.
T Consensus 4 F~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~------~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 4 FCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGE------QPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGA 77 (257)
T ss_pred EEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccc------cccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccH
Confidence 367766554 3345677788999999999998432 2346899999988888877754 4999999999999
Q ss_pred HHHHHHHhh---hhhhcceEEeccCCC
Q 044899 77 ILTLFAMKY---QERVLGLILVSPICK 100 (299)
Q Consensus 77 ia~~~a~~~---p~~v~~lvl~~~~~~ 100 (299)
+|..+|.+. .+.|..++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 999999875 346999999999876
No 117
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.83 E-value=6.7e-09 Score=88.25 Aligned_cols=90 Identities=14% Similarity=0.149 Sum_probs=62.8
Q ss_pred cCHhhHhhhhc-CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh
Q 044899 9 FCPDAASLLLH-NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 9 ~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
.|..+++.|.+ || +...|++|+|.+.+.. ......++++.+.+.++.+..+.++++|+||||||.+++.++..+|+
T Consensus 109 ~~~~li~~L~~~GY-~~~~dL~g~gYDwR~~--~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~ 185 (440)
T PLN02733 109 YFHDMIEQLIKWGY-KEGKTLFGFGYDFRQS--NRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSD 185 (440)
T ss_pred HHHHHHHHHHHcCC-ccCCCcccCCCCcccc--ccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCH
Confidence 34456666655 65 4489999999875431 11112344555555555566677899999999999999999998876
Q ss_pred h----hcceEEeccCCCC
Q 044899 88 R----VLGLILVSPICKA 101 (299)
Q Consensus 88 ~----v~~lvl~~~~~~~ 101 (299)
. |+++|.++++...
T Consensus 186 ~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 186 VFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred hHHhHhccEEEECCCCCC
Confidence 4 7888999876443
No 118
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.80 E-value=2.1e-08 Score=90.11 Aligned_cols=74 Identities=18% Similarity=0.048 Sum_probs=56.1
Q ss_pred HhhHhhhh-cCcEEEEECCCCCCCCCCCCC--------CCCC-----------CCCHHHHHHHHHHHHHHhC--------
Q 044899 11 PDAASLLL-HNFCIYHIDASGHELGADEIY--------SDFP-----------LLNVDDLAEQVAEVLDFFG-------- 62 (299)
Q Consensus 11 ~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~--------~~~~-----------~~~~~~~~~dl~~~l~~l~-------- 62 (299)
..+...|. +||+|+++|+||||+|..... .... ..++...+.|+..+...++
T Consensus 466 ~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~ 545 (792)
T TIGR03502 466 LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAP 545 (792)
T ss_pred HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccc
Confidence 34455554 699999999999999944300 0001 1378999999999988887
Q ss_pred --------CCcEEEEeeChhHHHHHHHHHh
Q 044899 63 --------LEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 63 --------~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
..+++++||||||++++.++..
T Consensus 546 ~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 546 LSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred cccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 2489999999999999999975
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.78 E-value=7.1e-07 Score=72.50 Aligned_cols=86 Identities=17% Similarity=0.100 Sum_probs=51.7
Q ss_pred hhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEeeChhHHHHHHHHHhh---
Q 044899 12 DAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL---EKVLCLGVTAGAYILTLFAMKY--- 85 (299)
Q Consensus 12 ~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~--- 85 (299)
.+...|.+||.|+++|+.|.|..- . ......+.+-|.++...++....++ .++.++|||-||.-++..+...
T Consensus 18 ~l~~~L~~GyaVv~pDY~Glg~~y-~-~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~Y 95 (290)
T PF03583_consen 18 FLAAWLARGYAVVAPDYEGLGTPY-L-NGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSY 95 (290)
T ss_pred HHHHHHHCCCEEEecCCCCCCCcc-c-CcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHh
Confidence 456778999999999999998511 0 0111112233333333333333333 4899999999999987766443
Q ss_pred -hhh---hcceEEeccCC
Q 044899 86 -QER---VLGLILVSPIC 99 (299)
Q Consensus 86 -p~~---v~~lvl~~~~~ 99 (299)
||. +.+.+..++..
T Consensus 96 ApeL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 96 APELNRDLVGAAAGGPPA 113 (290)
T ss_pred CcccccceeEEeccCCcc
Confidence 443 55666555433
No 120
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.69 E-value=4.3e-08 Score=73.46 Aligned_cols=151 Identities=10% Similarity=0.112 Sum_probs=93.5
Q ss_pred hcCcEEEEECCCCC-CCCCCCCCCC----CCCCCHHHHHHHHHHHHHHh---C-CCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 18 LHNFCIYHIDASGH-ELGADEIYSD----FPLLNVDDLAEQVAEVLDFF---G-LEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 18 ~~~~~vi~~D~~G~-G~S~~~~~~~----~~~~~~~~~~~dl~~~l~~l---~-~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.+||.|+.+|+-+= -.|....... ....+.+..-.++..+++.+ + ..++-++|.+|||.++..+....| .
T Consensus 65 ~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~ 143 (242)
T KOG3043|consen 65 LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-E 143 (242)
T ss_pred cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccch-h
Confidence 45999999997432 1111000000 01123333445555555544 3 458899999999999999988877 6
Q ss_pred hcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHH
Q 044899 89 VLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMH 168 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
+.+++..-|....
T Consensus 144 f~a~v~~hps~~d------------------------------------------------------------------- 156 (242)
T KOG3043|consen 144 FDAGVSFHPSFVD------------------------------------------------------------------- 156 (242)
T ss_pred heeeeEecCCcCC-------------------------------------------------------------------
Confidence 7777776663211
Q ss_pred HHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCC---CceeEEEEcCCCCcccc-----cChH----
Q 044899 169 FLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGS---KNCGLVEVQACGSLVTE-----EYPL---- 234 (299)
Q Consensus 169 ~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~---~~~~~~~~~~~gH~~~~-----e~p~---- 234 (299)
......+++|+|++.|+.|.+++ ....+.+.+.. .+.++.++++.+|-++. +.|+
T Consensus 157 -----------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~ 225 (242)
T KOG3043|consen 157 -----------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKA 225 (242)
T ss_pred -----------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHH
Confidence 12334789999999999999983 33344444432 23579999999995542 3443
Q ss_pred --hHHHHHHHHHhhc
Q 044899 235 --AMLIPIELFLMGF 247 (299)
Q Consensus 235 --~~~~~i~~fl~~~ 247 (299)
+..+.+..|++++
T Consensus 226 ~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 226 AEEAYQRFISWFKHY 240 (242)
T ss_pred HHHHHHHHHHHHHHh
Confidence 3455666777653
No 121
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.65 E-value=1.6e-06 Score=69.67 Aligned_cols=60 Identities=10% Similarity=0.112 Sum_probs=47.6
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------CCcEEEEeeChhHHHHHHHHHhh
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG-------LEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+-+|+.+++||.|.|.. ..+.++++.|-.+.++.|. .+.+++.|||+||.++...+.++
T Consensus 170 ~~aNvl~fNYpGVg~S~G-------~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTG-------PPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cCCcEEEECCCccccCCC-------CCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 489999999999999853 2457888888777776653 25799999999999998866554
No 122
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.65 E-value=2e-07 Score=76.30 Aligned_cols=85 Identities=20% Similarity=0.313 Sum_probs=51.2
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCC-CCCCHHHHHH---------------HHHHHHHHhC------CCcEEEEee
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDF-PLLNVDDLAE---------------QVAEVLDFFG------LEKVLCLGV 71 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~~~~~~~---------------dl~~~l~~l~------~~~~~lvGh 71 (299)
..+..+||-|+++|.+|+|+......... ..++.+.++. |....++.|. .++|.++|+
T Consensus 154 ~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~Gf 233 (390)
T PF12715_consen 154 DQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGF 233 (390)
T ss_dssp HHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEE
T ss_pred HHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEee
Confidence 45667899999999999998754332111 1222233222 2333455543 248999999
Q ss_pred ChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 72 TAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 72 S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
||||..++.+++.- ++|++.|..+...
T Consensus 234 SmGg~~a~~LaALD-dRIka~v~~~~l~ 260 (390)
T PF12715_consen 234 SMGGYRAWWLAALD-DRIKATVANGYLC 260 (390)
T ss_dssp GGGHHHHHHHHHH--TT--EEEEES-B-
T ss_pred cccHHHHHHHHHcc-hhhHhHhhhhhhh
Confidence 99999999999876 6898888777643
No 123
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.61 E-value=4.7e-07 Score=82.59 Aligned_cols=180 Identities=13% Similarity=0.139 Sum_probs=116.0
Q ss_pred hhcCcEEEEECCCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCC--CcEEEEeeChhHHHHHHHHHhhhhh-h
Q 044899 17 LLHNFCIYHIDASGHELGADE----IYSDFPLLNVDDLAEQVAEVLDFFGL--EKVLCLGVTAGAYILTLFAMKYQER-V 89 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~~~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~-v 89 (299)
...|+.|+.+|.||-|..... .....+....+|....+..+++..-+ +++.++|+|.||.+++.++...|+. +
T Consensus 555 s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~f 634 (755)
T KOG2100|consen 555 SSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVF 634 (755)
T ss_pred ccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceE
Confidence 356999999999998765432 12223445777777777777776544 4899999999999999999999854 5
Q ss_pred cceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHH
Q 044899 90 LGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHF 169 (299)
Q Consensus 90 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (299)
++.+.++|......... ....++..... +....+
T Consensus 635 kcgvavaPVtd~~~yds----------------------~~terymg~p~---------~~~~~y--------------- 668 (755)
T KOG2100|consen 635 KCGVAVAPVTDWLYYDS----------------------TYTERYMGLPS---------ENDKGY--------------- 668 (755)
T ss_pred EEEEEecceeeeeeecc----------------------cccHhhcCCCc---------cccchh---------------
Confidence 55588988654321100 00001100000 000001
Q ss_pred HHHHhhccchhhhhccCCcce-EEEecCCCCCC--chhHHHHHhhCCC--ceeEEEEcCCCCcccccCh-HhHHHHHHHH
Q 044899 170 LQAINERHDLTKGLKELQCKT-LIFVGESSPFH--TESLHMSATMGSK--NCGLVEVQACGSLVTEEYP-LAMLIPIELF 243 (299)
Q Consensus 170 ~~~~~~~~~~~~~l~~i~~Pv-l~i~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~e~p-~~~~~~i~~f 243 (299)
........+..++.|. |+|||+.|..+ +++..+.+.+... ..+..++|+..|....-.. ..+...+..|
T Consensus 669 -----~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~~~ 743 (755)
T KOG2100|consen 669 -----EESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLDRF 743 (755)
T ss_pred -----hhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHHHH
Confidence 1122233344556565 99999999988 5667777777544 3778999999997765333 5688889999
Q ss_pred Hhhc
Q 044899 244 LMGF 247 (299)
Q Consensus 244 l~~~ 247 (299)
+..+
T Consensus 744 ~~~~ 747 (755)
T KOG2100|consen 744 LRDC 747 (755)
T ss_pred HHHH
Confidence 9854
No 124
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.59 E-value=2.8e-06 Score=69.66 Aligned_cols=194 Identities=18% Similarity=0.111 Sum_probs=112.4
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH------hCCCcEEEEeeChhHHHHHHHHHhhh------
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF------FGLEKVLCLGVTAGAYILTLFAMKYQ------ 86 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~------l~~~~~~lvGhS~Gg~ia~~~a~~~p------ 86 (299)
.+..|+.+|+|=- |.+.....++|-.+.+.-+.++ .+.++|.|+|-|.||.+|..+|.+.-
T Consensus 122 ~~~vvvSVdYRLA-------PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~ 194 (336)
T KOG1515|consen 122 LNCVVVSVDYRLA-------PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSK 194 (336)
T ss_pred cCeEEEecCcccC-------CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCC
Confidence 4889999999865 3334445677777777777764 23458999999999999999987642
Q ss_pred hhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhH
Q 044899 87 ERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNV 166 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (299)
.++++.|++-|................... ........+.+.......... ..-
T Consensus 195 ~ki~g~ili~P~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~w~~~lP~~~~-----------------------~~~ 248 (336)
T KOG1515|consen 195 PKIKGQILIYPFFQGTDRTESEKQQNLNGS---PELARPKIDKWWRLLLPNGKT-----------------------DLD 248 (336)
T ss_pred cceEEEEEEecccCCCCCCCHHHHHhhcCC---cchhHHHHHHHHHHhCCCCCC-----------------------CcC
Confidence 468999999998766544332111000000 000000001111111111100 000
Q ss_pred HHHHHHHhhccchhhhhccCCcc-eEEEecCCCCCCchhHHHHHhhCCCc--eeEEEEcCCCCcccccCh-----HhHHH
Q 044899 167 MHFLQAINERHDLTKGLKELQCK-TLIFVGESSPFHTESLHMSATMGSKN--CGLVEVQACGSLVTEEYP-----LAMLI 238 (299)
Q Consensus 167 ~~~~~~~~~~~~~~~~l~~i~~P-vl~i~G~~D~~~~~~~~~~~~~~~~~--~~~~~~~~~gH~~~~e~p-----~~~~~ 238 (299)
..+.... . ...........+| +|++.++.|.+.+....+++.+.+.+ +++.+++++.|.++.-.+ .++.+
T Consensus 249 ~p~~np~-~-~~~~~d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~ 326 (336)
T KOG1515|consen 249 HPFINPV-G-NSLAKDLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMD 326 (336)
T ss_pred Ccccccc-c-cccccCccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHH
Confidence 0000000 0 0111122334555 99999999999887888888886554 455678999996665433 45778
Q ss_pred HHHHHHhhc
Q 044899 239 PIELFLMGF 247 (299)
Q Consensus 239 ~i~~fl~~~ 247 (299)
.+.+|+++.
T Consensus 327 ~i~~fi~~~ 335 (336)
T KOG1515|consen 327 AIVEFIKSN 335 (336)
T ss_pred HHHHHHhhc
Confidence 888888753
No 125
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.56 E-value=1.5e-07 Score=74.95 Aligned_cols=82 Identities=16% Similarity=0.301 Sum_probs=60.8
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHH-HHHHhCC--CcEEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAE-VLDFFGL--EKVLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~-~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
...++.||.|+.+++||++.|...+- ...-...++.+.+ .|+.|+. +.++++|+|.||.-+..+|..||+ |+
T Consensus 262 ~tP~~lgYsvLGwNhPGFagSTG~P~----p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-Vk 336 (517)
T KOG1553|consen 262 NTPAQLGYSVLGWNHPGFAGSTGLPY----PVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VK 336 (517)
T ss_pred cChHHhCceeeccCCCCccccCCCCC----cccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ce
Confidence 34466799999999999999965321 1222333344433 4566665 589999999999999999999997 99
Q ss_pred ceEEeccCCC
Q 044899 91 GLILVSPICK 100 (299)
Q Consensus 91 ~lvl~~~~~~ 100 (299)
++||-+++-.
T Consensus 337 avvLDAtFDD 346 (517)
T KOG1553|consen 337 AVVLDATFDD 346 (517)
T ss_pred EEEeecchhh
Confidence 9999887543
No 126
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.55 E-value=8.8e-07 Score=76.23 Aligned_cols=186 Identities=14% Similarity=0.120 Sum_probs=113.6
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHhC---CCcEEEEeeChhHHHHHHHHHhh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADE----IYSDFPLLNVDDLAEQVAEVLDFFG---LEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+..+.+.||-|+.+|-||.-.-... .....+...++|.++-+.-+.++.| .++|.+-|+|.||++++...+++
T Consensus 669 ~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~ 748 (867)
T KOG2281|consen 669 FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQY 748 (867)
T ss_pred hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcC
Confidence 3445667999999999996433221 1112345678899999998888875 46899999999999999999999
Q ss_pred hhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchh
Q 044899 86 QERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLN 165 (299)
Q Consensus 86 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
|+.++..|.-+|...-..+. .....+++.-.-. +.... ....
T Consensus 749 P~IfrvAIAGapVT~W~~YD----------------------TgYTERYMg~P~~--------nE~gY--------~agS 790 (867)
T KOG2281|consen 749 PNIFRVAIAGAPVTDWRLYD----------------------TGYTERYMGYPDN--------NEHGY--------GAGS 790 (867)
T ss_pred cceeeEEeccCcceeeeeec----------------------ccchhhhcCCCcc--------chhcc--------cchh
Confidence 99777666555532211000 0000111111000 00000 0000
Q ss_pred HHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCC--ceeEEEEcCCCCcccc-cChHhHHHHH
Q 044899 166 VMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSK--NCGLVEVQACGSLVTE-EYPLAMLIPI 240 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i 240 (299)
+ ....+.+..-....|++||--|..+ -+...+...+.++ .-+++++|+-.|.+-. |.-.-+...+
T Consensus 791 V----------~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHsiR~~es~~~yE~rl 860 (867)
T KOG2281|consen 791 V----------AGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHSIRNPESGIYYEARL 860 (867)
T ss_pred H----------HHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccccCCCccchhHHHHH
Confidence 0 1112333333456899999999988 2344444444222 4789999999997643 5555678889
Q ss_pred HHHHhh
Q 044899 241 ELFLMG 246 (299)
Q Consensus 241 ~~fl~~ 246 (299)
..|+++
T Consensus 861 l~FlQ~ 866 (867)
T KOG2281|consen 861 LHFLQE 866 (867)
T ss_pred HHHHhh
Confidence 999875
No 127
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.3e-06 Score=64.67 Aligned_cols=165 Identities=10% Similarity=0.109 Sum_probs=98.5
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC-CCcEEEEeeChhHHHHHHHHHhh-hhh
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF----FG-LEKVLCLGVTAGAYILTLFAMKY-QER 88 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l~-~~~~~lvGhS~Gg~ia~~~a~~~-p~~ 88 (299)
..+..||+|..++ ++.+. ...+++....++...++. .. .+.+.+-|||.|+.+|+....+. ..+
T Consensus 92 ~a~~~gY~vasvg---Y~l~~-------q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~pr 161 (270)
T KOG4627|consen 92 PAVRRGYRVASVG---YNLCP-------QVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPR 161 (270)
T ss_pred hhhhcCeEEEEec---cCcCc-------ccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCch
Confidence 3466799999885 44442 234666666665555443 32 34577888999999999887653 457
Q ss_pred hcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHH
Q 044899 89 VLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMH 168 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
|.++++.++...... . ...-...... .+.+..+.
T Consensus 162 I~gl~l~~GvY~l~E---------------------L-----~~te~g~dlg-----Lt~~~ae~--------------- 195 (270)
T KOG4627|consen 162 IWGLILLCGVYDLRE---------------------L-----SNTESGNDLG-----LTERNAES--------------- 195 (270)
T ss_pred HHHHHHHhhHhhHHH---------------------H-----hCCccccccC-----cccchhhh---------------
Confidence 888888776432100 0 0000000000 00000000
Q ss_pred HHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChH----hHHHHHHH
Q 044899 169 FLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPL----AMLIPIEL 242 (299)
Q Consensus 169 ~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~----~~~~~i~~ 242 (299)
...+ ...+..+++|+|++.|+.|..- +..+.+...+. ++.+..++|.+|+-.+++-. .+...+++
T Consensus 196 ------~Scd-l~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~--~a~~~~f~n~~hy~I~~~~~~~~s~~~~~~~~ 266 (270)
T KOG4627|consen 196 ------VSCD-LWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLR--KASFTLFKNYDHYDIIEETAIDDSDVSRFLRN 266 (270)
T ss_pred ------cCcc-HHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhh--hcceeecCCcchhhHHHHhccccchHHHHHHH
Confidence 0011 2344578999999999999654 77788888887 68999999999988776442 24444444
Q ss_pred HH
Q 044899 243 FL 244 (299)
Q Consensus 243 fl 244 (299)
|+
T Consensus 267 ~~ 268 (270)
T KOG4627|consen 267 IE 268 (270)
T ss_pred Hh
Confidence 43
No 128
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.54 E-value=2.7e-06 Score=70.38 Aligned_cols=171 Identities=14% Similarity=0.076 Sum_probs=95.5
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---hC--CCcEEEEeeChhHHHHHHHHHhhhh----h
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF---FG--LEKVLCLGVTAGAYILTLFAMKYQE----R 88 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~---l~--~~~~~lvGhS~Gg~ia~~~a~~~p~----~ 88 (299)
..|+.|+.+|+|=--+- .....+++..+.+..+.++ ++ .+++.++|+|.||.+++.++..-.+ .
T Consensus 108 ~~g~~vv~vdYrlaPe~-------~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~ 180 (312)
T COG0657 108 AAGAVVVSVDYRLAPEH-------PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPL 180 (312)
T ss_pred HcCCEEEecCCCCCCCC-------CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCC
Confidence 46999999999986322 2234566655544444444 33 4589999999999999999987654 4
Q ss_pred hcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHH
Q 044899 89 VLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMH 168 (299)
Q Consensus 89 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (299)
....+++.|...... .... .. ..+....+.......++...+ ..........
T Consensus 181 p~~~~li~P~~d~~~-~~~~----~~----~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~p 232 (312)
T COG0657 181 PAAQVLISPLLDLTS-SAAS----LP----GYGEADLLDAAAILAWFADLY-------------------LGAAPDREDP 232 (312)
T ss_pred ceEEEEEecccCCcc-cccc----hh----hcCCccccCHHHHHHHHHHHh-------------------CcCccccCCC
Confidence 788899998765443 1000 00 000000000000010111110 0000000000
Q ss_pred HHHHHhhccchhhhhccCCcceEEEecCCCCCCchhHHHHHhhCCC--ceeEEEEcCCCCccc
Q 044899 169 FLQAINERHDLTKGLKELQCKTLIFVGESSPFHTESLHMSATMGSK--NCGLVEVQACGSLVT 229 (299)
Q Consensus 169 ~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~~~~gH~~~ 229 (299)
. ...-....+.. -.|+++++|+.|.+.+....+.+.+... .++++.+++..|.+.
T Consensus 233 ~-----~spl~~~~~~~-lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~ 289 (312)
T COG0657 233 E-----ASPLASDDLSG-LPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFD 289 (312)
T ss_pred c-----cCccccccccC-CCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceecc
Confidence 0 00000111333 4579999999999998888888777544 467899999999553
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.53 E-value=8.3e-06 Score=69.06 Aligned_cols=86 Identities=15% Similarity=0.125 Sum_probs=62.0
Q ss_pred ccccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-----CCcEEEEeeChhHHHHHH
Q 044899 6 GLFFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG-----LEKVLCLGVTAGAYILTL 80 (299)
Q Consensus 6 ~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-----~~~~~lvGhS~Gg~ia~~ 80 (299)
+|-...++-..|..|+.||-+.+.-. + ...-++.+......++++.+. ..+++|+|.|.||+.++.
T Consensus 86 GFK~dSevG~AL~~GHPvYFV~F~p~-------P--~pgQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~m 156 (581)
T PF11339_consen 86 GFKPDSEVGVALRAGHPVYFVGFFPE-------P--EPGQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMM 156 (581)
T ss_pred CCCcccHHHHHHHcCCCeEEEEecCC-------C--CCCCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHH
Confidence 33344455556666777766654322 1 224588888887777777652 238999999999999999
Q ss_pred HHHhhhhhhcceEEeccCCC
Q 044899 81 FAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 81 ~a~~~p~~v~~lvl~~~~~~ 100 (299)
+|+.+|+.+.-+|+.+++..
T Consensus 157 lAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 157 LAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred HHhcCcCccCceeecCCCcc
Confidence 99999999999998886554
No 130
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.52 E-value=1.1e-06 Score=65.75 Aligned_cols=81 Identities=14% Similarity=0.251 Sum_probs=63.3
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC----cEEEEeeChhHHHHHHHHHh--hh
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE----KVLCLGVTAGAYILTLFAMK--YQ 86 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~--~p 86 (299)
...+...+|.++-+-++.+- ...+..++.+-++|+..++++++.. .|+|+|||.|+.-.+.|... .+
T Consensus 59 ~~~lde~~wslVq~q~~Ssy-------~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~ 131 (299)
T KOG4840|consen 59 NRYLDENSWSLVQPQLRSSY-------NGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKD 131 (299)
T ss_pred HHHHhhccceeeeeeccccc-------cccccccccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccch
Confidence 34455679999998887652 2255678999999999999988652 79999999999999988732 36
Q ss_pred hhhcceEEeccCCC
Q 044899 87 ERVLGLILVSPICK 100 (299)
Q Consensus 87 ~~v~~lvl~~~~~~ 100 (299)
..+++.|+.+|...
T Consensus 132 r~iraaIlqApVSD 145 (299)
T KOG4840|consen 132 RKIRAAILQAPVSD 145 (299)
T ss_pred HHHHHHHHhCccch
Confidence 67888888888654
No 131
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.50 E-value=5e-06 Score=69.70 Aligned_cols=85 Identities=13% Similarity=0.253 Sum_probs=62.3
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCC------CCCCCHHHHHH-HHHHHHHH----hCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSD------FPLLNVDDLAE-QVAEVLDF----FGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~------~~~~~~~~~~~-dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..+||+|+.-..||--.|....... .-.+++++++. ||-+.++. -+.++++.+|||.|+.+....+...
T Consensus 103 adaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~ 182 (403)
T KOG2624|consen 103 ADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSER 182 (403)
T ss_pred HHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhccc
Confidence 3469999999999977665432111 12356666543 55555554 4667999999999999999998887
Q ss_pred hh---hhcceEEeccCCCC
Q 044899 86 QE---RVLGLILVSPICKA 101 (299)
Q Consensus 86 p~---~v~~lvl~~~~~~~ 101 (299)
|+ +|+.+++++|....
T Consensus 183 p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 183 PEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred chhhhhhheeeeecchhhh
Confidence 65 79999999998743
No 132
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.40 E-value=5.8e-07 Score=57.45 Aligned_cols=44 Identities=16% Similarity=0.328 Sum_probs=34.2
Q ss_pred hHh-hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 044899 13 AAS-LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLD 59 (299)
Q Consensus 13 ~~~-~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~ 59 (299)
++. +..+||.|+++|+||||+|... .....+++++++|+..+++
T Consensus 35 ~a~~L~~~G~~V~~~D~rGhG~S~g~---rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 35 LAEFLAEQGYAVFAYDHRGHGRSEGK---RGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHhCCCEEEEECCCcCCCCCCc---ccccCCHHHHHHHHHHHhC
Confidence 444 4456999999999999999742 2345689999999998874
No 133
>PRK04940 hypothetical protein; Provisional
Probab=98.39 E-value=4.5e-05 Score=56.44 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHhC----CCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCC
Q 044899 47 VDDLAEQVAEVLDFFG----LEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKA 101 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 101 (299)
.....+.+.+.+..+. .+++.|||+|+||+.|..++.++. + ..||++|+..+
T Consensus 39 P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCCh
Confidence 3444445555554311 257999999999999999999985 3 67899998754
No 134
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.39 E-value=3.4e-06 Score=66.06 Aligned_cols=86 Identities=16% Similarity=0.184 Sum_probs=53.4
Q ss_pred CHhhHhh-hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-Hh------CCCcEEEEeeChhHHHHHHH
Q 044899 10 CPDAASL-LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLD-FF------GLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 10 ~~~~~~~-l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~-~l------~~~~~~lvGhS~Gg~ia~~~ 81 (299)
|.++... .+.||-|+++|+...+.... ........++++.+.+-++ .+ +..++.|.|||-||-+|..+
T Consensus 33 Ys~ll~hvAShGyIVV~~d~~~~~~~~~----~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~ 108 (259)
T PF12740_consen 33 YSQLLEHVASHGYIVVAPDLYSIGGPDD----TDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAM 108 (259)
T ss_pred HHHHHHHHHhCceEEEEecccccCCCCc----chhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHH
Confidence 3344444 45699999999766532110 0111122222222222111 11 34589999999999999999
Q ss_pred HHhh-----hhhhcceEEeccCC
Q 044899 82 AMKY-----QERVLGLILVSPIC 99 (299)
Q Consensus 82 a~~~-----p~~v~~lvl~~~~~ 99 (299)
+..+ +.+++++|+++|.-
T Consensus 109 al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 109 ALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred HhhhcccccccceeEEEEecccc
Confidence 9887 55899999999975
No 135
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.38 E-value=2.8e-06 Score=67.15 Aligned_cols=55 Identities=18% Similarity=0.317 Sum_probs=41.6
Q ss_pred CHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhhhh-----hhcceEEeccCCC
Q 044899 46 NVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKYQE-----RVLGLILVSPICK 100 (299)
Q Consensus 46 ~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 100 (299)
++...++.+..++..| +++++.+|||||||..++.++..+.. .+..+|.++++..
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfn 144 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFN 144 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccC
Confidence 5777777777777665 67799999999999999999987632 5899999997654
No 136
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.38 E-value=4.9e-06 Score=64.94 Aligned_cols=77 Identities=14% Similarity=0.225 Sum_probs=52.2
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHh-----CCCcEEEEeeChhHHHHHHHHHhhh---
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAE----QVAEVLDFF-----GLEKVLCLGVTAGAYILTLFAMKYQ--- 86 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~----dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p--- 86 (299)
..++++++|+...... .....+.+.++ .+..+++.+ +.++++||||||||.+|..++...+
T Consensus 38 ~~~d~ft~df~~~~s~-------~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~ 110 (225)
T PF07819_consen 38 SHFDFFTVDFNEELSA-------FHGRTLQRQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDP 110 (225)
T ss_pred cceeEEEeccCccccc-------cccccHHHHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhcccccc
Confidence 3689999998876422 11223333333 444444444 4568999999999999988876543
Q ss_pred hhhcceEEeccCCCCC
Q 044899 87 ERVLGLILVSPICKAP 102 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~ 102 (299)
+.|+.+|.++++...+
T Consensus 111 ~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 111 DSVKTIITLGTPHRGS 126 (225)
T ss_pred ccEEEEEEEcCCCCCc
Confidence 4799999999866543
No 137
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.30 E-value=5.7e-06 Score=64.21 Aligned_cols=111 Identities=17% Similarity=0.221 Sum_probs=63.4
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--------hhcceEEeccCCCCCchhHHHHHHHHHHHH
Q 044899 46 NVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--------RVLGLILVSPICKAPSWTEWLYNKVLMNLL 117 (299)
Q Consensus 46 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 117 (299)
.+++..+.|.+.++..|. =..|+|+|.||.+|..++..... .++-+|++++.......
T Consensus 85 ~~~~sl~~l~~~i~~~GP-fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------- 150 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENGP-FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------- 150 (212)
T ss_dssp --HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------------
T ss_pred CHHHHHHHHHHHHHhcCC-eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------------
Confidence 456666677777777652 24699999999999999875421 36777888775431110
Q ss_pred HhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCC
Q 044899 118 YFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGES 197 (299)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~ 197 (299)
+ .+.. .-..|++|+|.|+|++
T Consensus 151 -----------------~-----------------------------------------~~~~-~~~~i~iPtlHv~G~~ 171 (212)
T PF03959_consen 151 -----------------Y-----------------------------------------QELY-DEPKISIPTLHVIGEN 171 (212)
T ss_dssp -----------------G-----------------------------------------TTTT---TT---EEEEEEETT
T ss_pred -----------------h-----------------------------------------hhhh-ccccCCCCeEEEEeCC
Confidence 0 0000 1236799999999999
Q ss_pred CCCCc--hhHHHHHhhCCCceeEEEEcCCCCccccc
Q 044899 198 SPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEE 231 (299)
Q Consensus 198 D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e 231 (299)
|.+++ .+..+.+..... .+++..+ +||.+...
T Consensus 172 D~~~~~~~s~~L~~~~~~~-~~v~~h~-gGH~vP~~ 205 (212)
T PF03959_consen 172 DPVVPPERSEALAEMFDPD-ARVIEHD-GGHHVPRK 205 (212)
T ss_dssp -SSS-HHHHHHHHHHHHHH-EEEEEES-SSSS----
T ss_pred CCCcchHHHHHHHHhccCC-cEEEEEC-CCCcCcCC
Confidence 99995 777788877732 7777776 88877643
No 138
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.27 E-value=3.2e-06 Score=73.02 Aligned_cols=80 Identities=11% Similarity=0.106 Sum_probs=59.1
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---C--CCcEEEEeeChhHHHHHHHHHhhhhhhc
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF---G--LEKVLCLGVTAGAYILTLFAMKYQERVL 90 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~ 90 (299)
+.++||.|+..|.||.|.|+.... ..++ +-++|-.++|+.+ . -.+|..+|.|++|+..+.+|+..|..++
T Consensus 76 ~aa~GYavV~qDvRG~~~SeG~~~---~~~~--~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLk 150 (563)
T COG2936 76 FAAQGYAVVNQDVRGRGGSEGVFD---PESS--REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALK 150 (563)
T ss_pred eecCceEEEEecccccccCCcccc---eecc--ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchhe
Confidence 567899999999999999975421 1222 2334444444433 2 2489999999999999999999998899
Q ss_pred ceEEeccCCC
Q 044899 91 GLILVSPICK 100 (299)
Q Consensus 91 ~lvl~~~~~~ 100 (299)
+++...+...
T Consensus 151 ai~p~~~~~D 160 (563)
T COG2936 151 AIAPTEGLVD 160 (563)
T ss_pred eecccccccc
Confidence 9888877554
No 139
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.26 E-value=1.8e-05 Score=59.70 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=43.8
Q ss_pred cCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 185 ELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 185 ~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
.+++|.|.|.|+.|.+++ .+..+++... +..+..-+ +||++.-.. .+.+.|.+|+++.
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~--~a~vl~Hp-ggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFK--DATVLEHP-GGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcC--CCeEEecC-CCccCCCch--HHHHHHHHHHHHH
Confidence 689999999999999994 4578888888 55555555 899877554 5666677776653
No 140
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.23 E-value=6.1e-05 Score=62.53 Aligned_cols=156 Identities=15% Similarity=0.136 Sum_probs=93.5
Q ss_pred HHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhc-c-hhHHHH
Q 044899 54 VAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYG-M-CGVLKE 128 (299)
Q Consensus 54 l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 128 (299)
+.+++... .+++++|.|.|==|..++..|+ ..+||.+++-+.-..... ...+.......| . ...+.+
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~-------~~~l~h~y~~yG~~ws~a~~d 230 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNM-------KANLEHQYRSYGGNWSFAFQD 230 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCc-------HHHHHHHHHHhCCCCccchhh
Confidence 34444444 5779999999999999999998 557888887665432111 111111111112 1 111111
Q ss_pred HHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC--chhHH
Q 044899 129 CLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH--TESLH 206 (299)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~--~~~~~ 206 (299)
++..... .......+.... .-.|......++++|.++|.|..|.+. +....
T Consensus 231 -----Y~~~gi~------------------~~l~tp~f~~L~----~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~ 283 (367)
T PF10142_consen 231 -----YYNEGIT------------------QQLDTPEFDKLM----QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNF 283 (367)
T ss_pred -----hhHhCch------------------hhcCCHHHHHHH----HhcCHHHHHHhcCccEEEEecCCCceeccCchHH
Confidence 1111100 000111111111 113444455677999999999999987 56777
Q ss_pred HHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhcC
Q 044899 207 MSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 248 (299)
+...++. ...+..+||++|.... ..+.+.+..|+....
T Consensus 284 y~d~L~G-~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~~~ 321 (367)
T PF10142_consen 284 YYDKLPG-EKYLRYVPNAGHSLIG---SDVVQSLRAFYNRIQ 321 (367)
T ss_pred HHhhCCC-CeeEEeCCCCCcccch---HHHHHHHHHHHHHHH
Confidence 7888875 5788999999997765 667788889988753
No 141
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.21 E-value=4.3e-05 Score=59.05 Aligned_cols=82 Identities=16% Similarity=0.153 Sum_probs=52.5
Q ss_pred cCcEEEEECCCCCCCCCC----CCC-CCCCCCCHHHHHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhhhhhhcc
Q 044899 19 HNFCIYHIDASGHELGAD----EIY-SDFPLLNVDDLAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~----~~~-~~~~~~~~~~~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
.||-|+.++......... ... .....-....++..+..+..+.+++ +|++.|+|.||+++..++..||+.+.+
T Consensus 45 ~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa 124 (220)
T PF10503_consen 45 EGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAA 124 (220)
T ss_pred CCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceE
Confidence 488999888643211100 000 0011112333344444455555554 899999999999999999999999999
Q ss_pred eEEeccCCC
Q 044899 92 LILVSPICK 100 (299)
Q Consensus 92 lvl~~~~~~ 100 (299)
+...++.+.
T Consensus 125 ~a~~sG~~~ 133 (220)
T PF10503_consen 125 VAVVSGVPY 133 (220)
T ss_pred EEeeccccc
Confidence 988887554
No 142
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.20 E-value=0.00013 Score=56.01 Aligned_cols=220 Identities=12% Similarity=0.102 Sum_probs=115.1
Q ss_pred cCcEEEEECCCCCCCCC---CCCC--CCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEeeChhHHHHHHHHHhh--hhhh
Q 044899 19 HNFCIYHIDASGHELGA---DEIY--SDFPLLNVDDLAEQVAEVLDFFG--LEKVLCLGVTAGAYILTLFAMKY--QERV 89 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~---~~~~--~~~~~~~~~~~~~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~--p~~v 89 (299)
+.+.++.+-..||-.-. .... .....+++++.++-=.++++..- ..+++++|||.|+++.+.+.... .-.|
T Consensus 58 ~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~v 137 (301)
T KOG3975|consen 58 DRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSV 137 (301)
T ss_pred cccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccce
Confidence 34669999888885432 1111 12245789999988888887653 34899999999999999988632 2247
Q ss_pred cceEEeccCCCCC--chhHHHHH------HH---HHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHH
Q 044899 90 LGLILVSPICKAP--SWTEWLYN------KV---LMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVL 158 (299)
Q Consensus 90 ~~lvl~~~~~~~~--~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (299)
.+.+++=|..... +...+... .. +...+.......+.+..+.+.++..... .++.........
T Consensus 138 qKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~------p~e~l~tal~l~ 211 (301)
T KOG3975|consen 138 QKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFIRFILIKFMLCGSNG------PQEFLSTALFLT 211 (301)
T ss_pred EEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHHHHHHHHHhcccCCC------cHHHHhhHHHhh
Confidence 7777776643210 00000000 00 0000001111222222222222211110 111111111110
Q ss_pred hcccchhHHH-HHHHHhh-ccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChH
Q 044899 159 DQGQSLNVMH-FLQAINE-RHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPL 234 (299)
Q Consensus 159 ~~~~~~~~~~-~~~~~~~-~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 234 (299)
...-.+.... ..+.+.. .....+.+++-.+-+.+.+|..|.++| ....+.+.++..+.++-+ ++.-|.+...+.+
T Consensus 212 h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q 290 (301)
T KOG3975|consen 212 HPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQ 290 (301)
T ss_pred cHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccH
Confidence 0000000000 0000000 001122333435678899999999994 566777888876777777 7899999889999
Q ss_pred hHHHHHHHHHh
Q 044899 235 AMLIPIELFLM 245 (299)
Q Consensus 235 ~~~~~i~~fl~ 245 (299)
..++.+.+.++
T Consensus 291 ~ma~~v~d~~~ 301 (301)
T KOG3975|consen 291 YMANAVFDMIQ 301 (301)
T ss_pred HHHHHHHHhhC
Confidence 99888887653
No 143
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.14 E-value=1.6e-05 Score=68.25 Aligned_cols=144 Identities=12% Similarity=0.071 Sum_probs=94.6
Q ss_pred ccccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------HhCCCcEEEEeeChhHHH
Q 044899 6 GLFFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLD--------FFGLEKVLCLGVTAGAYI 77 (299)
Q Consensus 6 ~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~--------~l~~~~~~lvGhS~Gg~i 77 (299)
.+++|.....+..+-..|-+||++.-- +..++...++.+..+.. ++...+++|+|.|||+.+
T Consensus 194 ~~~~wqs~lsl~gevvev~tfdl~n~i----------gG~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmGAlV 263 (784)
T KOG3253|consen 194 RMWSWQSRLSLKGEVVEVPTFDLNNPI----------GGANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMGALV 263 (784)
T ss_pred HHHhHHHHHhhhceeeeeccccccCCC----------CCcchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccCcee
Confidence 345566666666667778888887641 11345555555555444 334568999999999988
Q ss_pred HHHHHHhhh-hhhcceEEeccCCCCCchhHHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHH
Q 044899 78 LTLFAMKYQ-ERVLGLILVSPICKAPSWTEWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRR 156 (299)
Q Consensus 78 a~~~a~~~p-~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (299)
+.+...... ..|+++|.++-........
T Consensus 264 achVSpsnsdv~V~~vVCigypl~~vdgp--------------------------------------------------- 292 (784)
T KOG3253|consen 264 ACHVSPSNSDVEVDAVVCIGYPLDTVDGP--------------------------------------------------- 292 (784)
T ss_pred eEEeccccCCceEEEEEEecccccCCCcc---------------------------------------------------
Confidence 888776542 3488888887644321100
Q ss_pred HHhcccchhHHHHHHHHhhccchhhhhccCCcceEEEecCCCCCC-c-hhHHHHHhhCCCceeEEEEcCCCCcccc
Q 044899 157 VLDQGQSLNVMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFH-T-ESLHMSATMGSKNCGLVEVQACGSLVTE 230 (299)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~-~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 230 (299)
+....+.+-.++.|+|||.|.+|..+ + .-+.+.+++.. ..+++++.+++|-+-.
T Consensus 293 -------------------rgirDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA-~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 293 -------------------RGIRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQA-EVELHVIGGADHSMAI 348 (784)
T ss_pred -------------------cCCcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhc-cceEEEecCCCccccC
Confidence 01112233467899999999999999 3 44566666654 5889999999996554
No 144
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.05 E-value=1.2e-05 Score=67.75 Aligned_cols=35 Identities=17% Similarity=0.100 Sum_probs=26.0
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 64 EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+++.++|||+||..++..+.+. .++++.|++++..
T Consensus 228 ~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~ 262 (379)
T PF03403_consen 228 SRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWM 262 (379)
T ss_dssp EEEEEEEETHHHHHHHHHHHH--TT--EEEEES---
T ss_pred hheeeeecCchHHHHHHHHhhc-cCcceEEEeCCcc
Confidence 4789999999999999888765 6899999999853
No 145
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.02 E-value=4.4e-06 Score=68.10 Aligned_cols=57 Identities=19% Similarity=0.095 Sum_probs=43.4
Q ss_pred hhhhccCCcceEEEecCCCCCC---chhHHHHHhhCCCceeEEEEcCCCCcccccChHhH
Q 044899 180 TKGLKELQCKTLIFVGESSPFH---TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAM 236 (299)
Q Consensus 180 ~~~l~~i~~Pvl~i~G~~D~~~---~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~ 236 (299)
...+.+++.|++++.|..|.+. +........++....-+..++++.|+.+++-.++.
T Consensus 244 ~tgl~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 244 TTGLVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred cccceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 3457789999999999999865 34445555666444468889999999999877774
No 146
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.98 E-value=0.00024 Score=55.11 Aligned_cols=56 Identities=7% Similarity=-0.008 Sum_probs=43.9
Q ss_pred eEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcc-cccChHhHHHHHHHHHhhcC
Q 044899 190 TLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLV-TEEYPLAMLIPIELFLMGFG 248 (299)
Q Consensus 190 vl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~~~ 248 (299)
+.++.+++|.+++ ....+.+..+ ++++..++ +||.. ++-+.+.+.+.|.+-|+++.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WP--g~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWP--GCEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCC--CCEEEEee-cCceeeeehhchHHHHHHHHHHHhhh
Confidence 6777889998883 4556666667 89999998 89954 55788899999999988764
No 147
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.95 E-value=0.00039 Score=53.14 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=47.7
Q ss_pred cccccccCHhhHhhh--hcCcE-EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHH
Q 044899 3 CFQGLFFCPDAASLL--LHNFC-IYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILT 79 (299)
Q Consensus 3 c~~~~~~~~~~~~~l--~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 79 (299)
+|.||-..+.....| ..++. ++++|+|-.- .+. | --+.+.++|||+|||-.+|.
T Consensus 16 fF~GWg~d~~~f~hL~~~~~~D~l~~yDYr~l~------------~d~-----~------~~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 16 FFAGWGMDPSPFSHLILPENYDVLICYDYRDLD------------FDF-----D------LSGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred EEecCCCChHHhhhccCCCCccEEEEecCcccc------------ccc-----c------cccCceEEEEEEeHHHHHHH
Confidence 567777766666655 34555 4566776541 111 1 12457999999999999998
Q ss_pred HHHHhhhhhhcceEEeccCCCC
Q 044899 80 LFAMKYQERVLGLILVSPICKA 101 (299)
Q Consensus 80 ~~a~~~p~~v~~lvl~~~~~~~ 101 (299)
.+....| +...|.+++.+.+
T Consensus 73 ~~l~~~~--~~~aiAINGT~~P 92 (213)
T PF04301_consen 73 RVLQGIP--FKRAIAINGTPYP 92 (213)
T ss_pred HHhccCC--cceeEEEECCCCC
Confidence 8765543 6677777765543
No 148
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.91 E-value=0.0033 Score=54.28 Aligned_cols=83 Identities=18% Similarity=0.131 Sum_probs=57.7
Q ss_pred hcCcEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEeeChhHHHHHHHHHhh----
Q 044899 18 LHNFCIYHIDAS-GHELGADEIYSDFPLLNVDDLAEQVAEVLDFF-------GLEKVLCLGVTAGAYILTLFAMKY---- 85 (299)
Q Consensus 18 ~~~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~---- 85 (299)
.+..+++-+|.| |.|.|...... ....+.++.++++..+|..+ ...+++|.|.|.||..+-.+|...
T Consensus 83 ~~~an~l~iD~PvGtGfS~~~~~~-~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~ 161 (415)
T PF00450_consen 83 NKFANLLFIDQPVGTGFSYGNDPS-DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQN 161 (415)
T ss_dssp GGTSEEEEE--STTSTT-EESSGG-GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHT
T ss_pred ccccceEEEeecCceEEeeccccc-cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcc
Confidence 356899999955 99999654322 13457888899988888754 455999999999999887777542
Q ss_pred ------hhhhcceEEeccCCCC
Q 044899 86 ------QERVLGLILVSPICKA 101 (299)
Q Consensus 86 ------p~~v~~lvl~~~~~~~ 101 (299)
+-.++|+++.++....
T Consensus 162 ~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 162 KKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp CC--STTSEEEEEEEESE-SBH
T ss_pred ccccccccccccceecCccccc
Confidence 2237799988887653
No 149
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.90 E-value=0.00016 Score=61.71 Aligned_cols=50 Identities=10% Similarity=0.161 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHh-----CCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccC
Q 044899 49 DLAEQVAEVLDFF-----GLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPI 98 (299)
Q Consensus 49 ~~~~dl~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 98 (299)
.++++|.-.+++. +.++.+|+|+||||..|+.++.++|+++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccc
Confidence 3456666666653 2246899999999999999999999999999999985
No 150
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.78 E-value=1.2e-05 Score=66.27 Aligned_cols=78 Identities=17% Similarity=0.209 Sum_probs=47.3
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C--CCcEEEEeeChhHHHHHHHHHhhhh--hhc
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----G--LEKVLCLGVTAGAYILTLFAMKYQE--RVL 90 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~--~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~ 90 (299)
.+++||++|+...-.... . ..........+.|..+|..| + .++++|||||+||.+|-.++..... +|.
T Consensus 103 ~d~NVI~VDWs~~a~~~Y--~--~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~ 178 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNNY--P--QAVANTRLVGRQLAKFLSFLINNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIG 178 (331)
T ss_dssp S-EEEEEEE-HHHHSS-H--H--HHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SS
T ss_pred CCceEEEEcchhhccccc--c--chhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEEeeccchhhhhhhhhhccCcceee
Confidence 489999999965421100 0 00012233444444444433 3 4689999999999999988887776 899
Q ss_pred ceEEeccCCC
Q 044899 91 GLILVSPICK 100 (299)
Q Consensus 91 ~lvl~~~~~~ 100 (299)
+|+.++|+..
T Consensus 179 rItgLDPAgP 188 (331)
T PF00151_consen 179 RITGLDPAGP 188 (331)
T ss_dssp EEEEES-B-T
T ss_pred EEEecCcccc
Confidence 9999999754
No 151
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.77 E-value=0.0012 Score=52.29 Aligned_cols=60 Identities=10% Similarity=0.174 Sum_probs=45.9
Q ss_pred cCCcceEEEecCCCCCCc--hhHHHHHhhCCC--ceeEEEEcCCCCcccc-cChHhHHHHHHHHH
Q 044899 185 ELQCKTLIFVGESSPFHT--ESLHMSATMGSK--NCGLVEVQACGSLVTE-EYPLAMLIPIELFL 244 (299)
Q Consensus 185 ~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 244 (299)
..++|.|+|+++.|.+++ ..++..+..... .++...++++.|..++ ++|+++.+.+.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 456999999999999993 344444433322 4778888999998887 79999999999885
No 152
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.76 E-value=0.00011 Score=63.74 Aligned_cols=82 Identities=12% Similarity=0.112 Sum_probs=59.7
Q ss_pred CcEEEEECCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHhC-------CCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 20 NFCIYHIDASGHELGADEI---YSDFPLLNVDDLAEQVAEVLDFFG-------LEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~dl~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|--|+++++|-+|.|.+.. .......+.+...+|++.+++++. ..|++++|-|.||++|..+-.+||+.|
T Consensus 59 ~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~ 138 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLF 138 (434)
T ss_dssp TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-
T ss_pred CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCee
Confidence 7889999999999996431 122345788999999999988764 138999999999999999999999999
Q ss_pred cceEEeccCCCC
Q 044899 90 LGLILVSPICKA 101 (299)
Q Consensus 90 ~~lvl~~~~~~~ 101 (299)
.+.+..+++...
T Consensus 139 ~ga~ASSapv~a 150 (434)
T PF05577_consen 139 DGAWASSAPVQA 150 (434)
T ss_dssp SEEEEET--CCH
T ss_pred EEEEeccceeee
Confidence 999999877653
No 153
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.74 E-value=0.0001 Score=57.99 Aligned_cols=85 Identities=14% Similarity=0.092 Sum_probs=54.2
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhh---
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKY--- 85 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~--- 85 (299)
+...+.-.-.++.+.||+.|.-.. .. ....+...-...+..+++.+ +.++++|++||||+.+.+......
T Consensus 41 l~~~~~~~~~~i~FsWPS~g~~~~-Y~--~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~ 117 (233)
T PF05990_consen 41 LAHDLGFPGVVILFSWPSDGSLLG-YF--YDRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASE 117 (233)
T ss_pred HHHHhCCCceEEEEEcCCCCChhh-hh--hhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhc
Confidence 333343333899999999885211 01 11123334445555555544 567999999999999999886542
Q ss_pred -h-----hhhcceEEeccCCC
Q 044899 86 -Q-----ERVLGLILVSPICK 100 (299)
Q Consensus 86 -p-----~~v~~lvl~~~~~~ 100 (299)
+ .++..+|+++|-..
T Consensus 118 ~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 118 GERPDVKARFDNVILAAPDID 138 (233)
T ss_pred ccchhhHhhhheEEEECCCCC
Confidence 1 36788999988654
No 154
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=97.74 E-value=0.006 Score=50.56 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=49.8
Q ss_pred cEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCcEEEEeeChhHHHHHHHHHhhh------
Q 044899 21 FCIYHIDAS-GHELGADEIYSDFPLLNVDDLAEQVAEVLDF-------FGLEKVLCLGVTAGAYILTLFAMKYQ------ 86 (299)
Q Consensus 21 ~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p------ 86 (299)
.+|+-+|.| |.|.|-...+. ...+-+..++|+..++.. +...+++|.|-|.||..+-.+|..--
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~--~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPI--DKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCC--CccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccc
Confidence 368999988 89989543211 111222334555555543 24468999999999998888776431
Q ss_pred ----hhhcceEEeccCCC
Q 044899 87 ----ERVLGLILVSPICK 100 (299)
Q Consensus 87 ----~~v~~lvl~~~~~~ 100 (299)
-.++|+++-++...
T Consensus 80 ~~~~inLkGi~IGNg~t~ 97 (319)
T PLN02213 80 CEPPINLQGYMLGNPVTY 97 (319)
T ss_pred cCCceeeeEEEeCCCCCC
Confidence 14678888777553
No 155
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.70 E-value=0.00016 Score=48.96 Aligned_cols=58 Identities=19% Similarity=0.234 Sum_probs=50.1
Q ss_pred CcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhh
Q 044899 187 QCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMG 246 (299)
Q Consensus 187 ~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 246 (299)
..|+|+|.++.|+.+ ..+..+.+.+. +++++.+++.||..+.....-+.+.+.+||..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~--~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLP--GSRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCC--CceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 589999999999999 47788888888 68999999999988765556688999999975
No 156
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.69 E-value=1.6e-05 Score=64.92 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=49.8
Q ss_pred cchhhhhccCC-cceEEEecCCCCCCc--hhHHHHHhhCCCceeEEEEcCCCCcccccChH---hHHHHHHHHHhhc
Q 044899 177 HDLTKGLKELQ-CKTLIFVGESSPFHT--ESLHMSATMGSKNCGLVEVQACGSLVTEEYPL---AMLIPIELFLMGF 247 (299)
Q Consensus 177 ~~~~~~l~~i~-~Pvl~i~G~~D~~~~--~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~~~ 247 (299)
.+....+.++. +|+|+++|.+|..++ .+..+.........+...+++++|......+. +..+.+.+|+.+.
T Consensus 221 ~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 221 LDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred CcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 34444555565 799999999999984 55555555553246788888999987754433 6778888888753
No 157
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.61 E-value=0.00097 Score=50.09 Aligned_cols=54 Identities=19% Similarity=0.298 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHHHh---C--CCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccC
Q 044899 45 LNVDDLAEQVAEVLDFF---G--LEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPI 98 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~l---~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 98 (299)
.++...++.+..+++.. | ..++.+-|.||||.+++..+..+|..+.+++-..+.
T Consensus 69 ~~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 69 EGLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 45666677777777754 3 247899999999999999999998777777766664
No 158
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.59 E-value=0.0022 Score=56.35 Aligned_cols=98 Identities=14% Similarity=0.100 Sum_probs=71.7
Q ss_pred CcccccccCHhhHhhhhcCcEEEEECCCCCCCCCCCC----CCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEeeChhH
Q 044899 2 FCFQGLFFCPDAASLLLHNFCIYHIDASGHELGADEI----YSDFPLLNVDDLAEQVAEVLDFFG--LEKVLCLGVTAGA 75 (299)
Q Consensus 2 ~c~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~----~~~~~~~~~~~~~~dl~~~l~~l~--~~~~~lvGhS~Gg 75 (299)
+|..+.|.. ....++.+||-.-....||=|.=...= .......++.|+++....+++.-- .+.++++|-|.||
T Consensus 460 ~s~~p~Fs~-~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGG 538 (682)
T COG1770 460 ISMDPSFSI-ARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGG 538 (682)
T ss_pred ccCCcCccc-ceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchh
Confidence 455566664 456788899988888888876432110 001224588888888877776522 2479999999999
Q ss_pred HHHHHHHHhhhhhhcceEEeccCCC
Q 044899 76 YILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 76 ~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
++.-..+.+.|+.++++|+--|+..
T Consensus 539 mLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 539 MLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred HHHHHHHhhChhhhhheeecCCccc
Confidence 9999999999999999999998765
No 159
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.58 E-value=0.00032 Score=51.44 Aligned_cols=52 Identities=19% Similarity=0.197 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhhhh----hhcceEEeccCC
Q 044899 48 DDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKYQE----RVLGLILVSPIC 99 (299)
Q Consensus 48 ~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 99 (299)
..+...+...++.. ...+++++|||+||.+|..++..... .+..++..+++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34445555555443 56789999999999999999988765 455666666543
No 160
>COG4099 Predicted peptidase [General function prediction only]
Probab=97.54 E-value=0.00047 Score=54.50 Aligned_cols=42 Identities=10% Similarity=0.262 Sum_probs=36.4
Q ss_pred HHHhCCC--cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 58 LDFFGLE--KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 58 l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
.++.+++ +++++|.|+||+-++.++.++|+.+.+.+++++..
T Consensus 261 as~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~ 304 (387)
T COG4099 261 ASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGG 304 (387)
T ss_pred hhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCC
Confidence 3445554 89999999999999999999999999999998853
No 161
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.52 E-value=0.001 Score=54.95 Aligned_cols=65 Identities=18% Similarity=0.304 Sum_probs=48.1
Q ss_pred hHhhh-hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 13 AASLL-LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 13 ~~~~l-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+.+.| ..|+.|+.+|-.-|=.| ..+.+..+.|+..+++.. +..++.|+|+|+|+=+.-..-.+.|
T Consensus 279 v~~~l~~~gvpVvGvdsLRYfW~---------~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~ 348 (456)
T COG3946 279 VAEALQKQGVPVVGVDSLRYFWS---------ERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLP 348 (456)
T ss_pred HHHHHHHCCCceeeeehhhhhhc---------cCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCC
Confidence 34444 45999999997666444 357888899999888765 5679999999999987655544444
No 162
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.52 E-value=0.0005 Score=49.51 Aligned_cols=39 Identities=15% Similarity=0.290 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 48 DDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+.+.+.+..+++..+..++++.|||+||.+|..++....
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~ 86 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLA 86 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhh
Confidence 345566777666766678999999999999999998764
No 163
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.48 E-value=8.7e-05 Score=57.28 Aligned_cols=70 Identities=19% Similarity=0.293 Sum_probs=36.8
Q ss_pred hHh-hhhcCcE---EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 13 AAS-LLLHNFC---IYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 13 ~~~-~l~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+ +.++||. |+++++-................+..++.+-|.++++.-|. +|.||||||||.++-.+..
T Consensus 21 ~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~ 94 (219)
T PF01674_consen 21 LAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIK 94 (219)
T ss_dssp HHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHH
T ss_pred HHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHH
Confidence 444 4567999 89999955433211000000011223455555566666788 9999999999999888764
No 164
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.38 E-value=0.00032 Score=54.53 Aligned_cols=84 Identities=17% Similarity=0.177 Sum_probs=51.1
Q ss_pred HhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 14 ASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF-------GLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 14 ~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
....+.||-|+++++-.- .. + .....-.+....++.+..-+.++ ++.++.++|||.||-.|..+|..+.
T Consensus 67 ~HIASHGfIVVAPQl~~~--~~-p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a 142 (307)
T PF07224_consen 67 AHIASHGFIVVAPQLYTL--FP-P-DGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA 142 (307)
T ss_pred HHHhhcCeEEEechhhcc--cC-C-CchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc
Confidence 334457999999999753 11 1 00000011222222333323222 2458999999999999999998763
Q ss_pred --hhhcceEEeccCCCC
Q 044899 87 --ERVLGLILVSPICKA 101 (299)
Q Consensus 87 --~~v~~lvl~~~~~~~ 101 (299)
-.+.++|-++|....
T Consensus 143 ~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 143 TSLKFSALIGIDPVAGT 159 (307)
T ss_pred ccCchhheecccccCCC
Confidence 248889999986543
No 165
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.37 E-value=0.025 Score=48.83 Aligned_cols=80 Identities=14% Similarity=0.160 Sum_probs=50.6
Q ss_pred cCcEEEEEC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----h---CCCcEEEEeeChhHHHHHHHHHhh-----
Q 044899 19 HNFCIYHID-ASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF----F---GLEKVLCLGVTAGAYILTLFAMKY----- 85 (299)
Q Consensus 19 ~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~----l---~~~~~~lvGhS~Gg~ia~~~a~~~----- 85 (299)
+..+++-+| .-|.|.|....+.. ...+. +.++++..++.. . ...+++|+|.|.||..+-.+|..-
T Consensus 114 ~~anllfiDqPvGtGfSy~~~~~~-~~~d~-~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~ 191 (433)
T PLN03016 114 KMANIIFLDQPVGSGFSYSKTPID-KTGDI-SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNY 191 (433)
T ss_pred hcCcEEEecCCCCCCccCCCCCCC-ccCCH-HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcc
Confidence 457899999 77899995432211 11122 223455544443 2 346899999999999877776542
Q ss_pred -----hhhhcceEEeccCCC
Q 044899 86 -----QERVLGLILVSPICK 100 (299)
Q Consensus 86 -----p~~v~~lvl~~~~~~ 100 (299)
+-.++|+++-++...
T Consensus 192 ~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 192 ICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred cccCCcccceeeEecCCCcC
Confidence 125778888887543
No 166
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.36 E-value=0.0047 Score=50.84 Aligned_cols=44 Identities=14% Similarity=0.132 Sum_probs=35.3
Q ss_pred HHHHhCCCcEEEEeeChhHHHHHHHHHhhhh-hhcceEEeccCCC
Q 044899 57 VLDFFGLEKVLCLGVTAGAYILTLFAMKYQE-RVLGLILVSPICK 100 (299)
Q Consensus 57 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 100 (299)
++...+..+++|+||+.|+..++.+....+. .++++|++++...
T Consensus 186 ~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p 230 (310)
T PF12048_consen 186 FAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWP 230 (310)
T ss_pred HHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCC
Confidence 3344455669999999999999999988754 5899999998543
No 167
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.30 E-value=0.00037 Score=55.67 Aligned_cols=53 Identities=15% Similarity=0.203 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHH-hCCC--cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCC
Q 044899 49 DLAEQVAEVLDF-FGLE--KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKA 101 (299)
Q Consensus 49 ~~~~dl~~~l~~-l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 101 (299)
.+.++|...++. +... +..|+|+||||..|+.++.+||+.+.+++.+++....
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 345566666664 3332 2799999999999999999999999999999986543
No 168
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=97.24 E-value=0.0012 Score=52.62 Aligned_cols=33 Identities=9% Similarity=0.004 Sum_probs=27.2
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccC
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPI 98 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 98 (299)
++.++|||+||..++...+.+ ..+++.|+.+..
T Consensus 242 ~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~W 274 (399)
T KOG3847|consen 242 QAAVIGHSFGGATSIASSSSH-TDFRCAIALDAW 274 (399)
T ss_pred hhhheeccccchhhhhhhccc-cceeeeeeeeee
Confidence 688999999999998887765 458888888874
No 169
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.23 E-value=0.0017 Score=53.10 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=57.8
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh----
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGADE-IYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY---- 85 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~~~-~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~---- 85 (299)
.++..........+.+-||-.|.--.- ...+...|+-+.+..-|..+.+....++++|++||||.+++++...+.
T Consensus 137 aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~ 216 (377)
T COG4782 137 AQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRA 216 (377)
T ss_pred HHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccC
Confidence 344445555677888999887742110 001112344555555555555555677999999999999999887642
Q ss_pred ----hhhhcceEEeccCCC
Q 044899 86 ----QERVLGLILVSPICK 100 (299)
Q Consensus 86 ----p~~v~~lvl~~~~~~ 100 (299)
+.+++-+||.+|-..
T Consensus 217 ~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 217 DRPLPAKIKNVILAAPDID 235 (377)
T ss_pred CcchhhhhhheEeeCCCCC
Confidence 456788888887554
No 170
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.20 E-value=0.00073 Score=57.52 Aligned_cols=54 Identities=11% Similarity=0.169 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhhh------hhhcceEEeccCCC
Q 044899 47 VDDLAEQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKYQ------ERVLGLILVSPICK 100 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p------~~v~~lvl~~~~~~ 100 (299)
.+++...|..+++.. ..++|+||||||||.++..+....+ +.|+++|.++++..
T Consensus 99 ~~~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 99 RDEYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 445556666655543 3569999999999999999988764 25999999997654
No 171
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.18 E-value=0.00089 Score=55.76 Aligned_cols=73 Identities=21% Similarity=0.213 Sum_probs=56.2
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh--hhhcceEEeccCCC
Q 044899 23 IYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ--ERVLGLILVSPICK 100 (299)
Q Consensus 23 vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~ 100 (299)
++++++++-.... ......+.+...+.+++...+.+++.|+||||||.++..++..++ .+|+.++.++++-.
T Consensus 92 ~~~~~~~~~~~~~------~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 92 VYAFELSGGDGTY------SLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cccccccccCCCc------cccccHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 7777777651111 223456667777777888888899999999999999999998887 88999999998654
Q ss_pred C
Q 044899 101 A 101 (299)
Q Consensus 101 ~ 101 (299)
.
T Consensus 166 G 166 (336)
T COG1075 166 G 166 (336)
T ss_pred C
Confidence 4
No 172
>PLN02209 serine carboxypeptidase
Probab=97.17 E-value=0.032 Score=48.25 Aligned_cols=80 Identities=14% Similarity=0.173 Sum_probs=52.3
Q ss_pred cCcEEEEEC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEeeChhHHHHHHHHHhhh----
Q 044899 19 HNFCIYHID-ASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF-------GLEKVLCLGVTAGAYILTLFAMKYQ---- 86 (299)
Q Consensus 19 ~~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p---- 86 (299)
+..+++-+| ..|.|.|-...+. ...+-++.++++..++..+ ...+++|.|.|.||..+-.+|..--
T Consensus 116 ~~anllfiDqPvGtGfSy~~~~~--~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~ 193 (437)
T PLN02209 116 KTANIIFLDQPVGSGFSYSKTPI--ERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNY 193 (437)
T ss_pred hcCcEEEecCCCCCCccCCCCCC--CccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcc
Confidence 457899999 7789998543221 1123334456666665542 3358999999999998777775431
Q ss_pred ------hhhcceEEeccCCC
Q 044899 87 ------ERVLGLILVSPICK 100 (299)
Q Consensus 87 ------~~v~~lvl~~~~~~ 100 (299)
-.++|+++.++...
T Consensus 194 ~~~~~~inl~Gi~igng~td 213 (437)
T PLN02209 194 ICCNPPINLQGYVLGNPITH 213 (437)
T ss_pred cccCCceeeeeEEecCcccC
Confidence 24678888887554
No 173
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.15 E-value=0.028 Score=44.67 Aligned_cols=82 Identities=17% Similarity=0.166 Sum_probs=58.6
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHH-----HHHHHHHhhhhhh
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAY-----ILTLFAMKYQERV 89 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~-----ia~~~a~~~p~~v 89 (299)
+.+-....|+..|+-.--.- +...+.++++++++-+.++++.+|.+ +++++.+.-+. +++.-+...|..-
T Consensus 125 ~alLp~~~vyitDW~dAr~V----p~~~G~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~P 199 (415)
T COG4553 125 EALLPYHDVYITDWVDARMV----PLEAGHFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVP 199 (415)
T ss_pred HHhccccceeEeecccccee----ecccCCccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCC
Confidence 34445778889888765322 33356799999999999999999976 78888776543 4444444456678
Q ss_pred cceEEeccCCCC
Q 044899 90 LGLILVSPICKA 101 (299)
Q Consensus 90 ~~lvl~~~~~~~ 101 (299)
..+++++++...
T Consensus 200 ssMtlmGgPIDa 211 (415)
T COG4553 200 SSMTLMGGPIDA 211 (415)
T ss_pred ceeeeecCcccc
Confidence 899999987653
No 174
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.10 E-value=0.0016 Score=51.22 Aligned_cols=25 Identities=20% Similarity=0.343 Sum_probs=21.2
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 62 GLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 62 ~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
...++++.|||+||.+|..++....
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHH
Confidence 3458999999999999999887654
No 175
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.09 E-value=0.0034 Score=49.88 Aligned_cols=81 Identities=17% Similarity=0.223 Sum_probs=57.6
Q ss_pred cCcEEEEECCC-------CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 19 HNFCIYHIDAS-------GHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 19 ~~~~vi~~D~~-------G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
+||-|+.+|-- |.|.+..+............+.+.+..++.+.+++ +|++.|.|-||.++..+++.+|+.+
T Consensus 90 ~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~f 169 (312)
T COG3509 90 EGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIF 169 (312)
T ss_pred cCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccc
Confidence 58999998521 22222111111122334555666677777777887 8999999999999999999999999
Q ss_pred cceEEeccCC
Q 044899 90 LGLILVSPIC 99 (299)
Q Consensus 90 ~~lvl~~~~~ 99 (299)
.++..++...
T Consensus 170 aa~A~VAg~~ 179 (312)
T COG3509 170 AAIAPVAGLL 179 (312)
T ss_pred cceeeeeccc
Confidence 9999988755
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.04 E-value=0.0018 Score=53.65 Aligned_cols=79 Identities=19% Similarity=0.229 Sum_probs=58.7
Q ss_pred CcEEEEECCCCCCCCCCCCCC------CCCCCCHHHHHHHHHHHHHHhCC------CcEEEEeeChhHHHHHHHHHhhhh
Q 044899 20 NFCIYHIDASGHELGADEIYS------DFPLLNVDDLAEQVAEVLDFFGL------EKVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~------~~~~~~~~~~~~dl~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
+--+|-.++|-+|+|.+--.. +....+.++..+|.+.++.+++- .+|+.+|-|.||+++..+=.+||.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 567888999999998642111 11234566666777777777653 389999999999999999999999
Q ss_pred hhcceEEeccC
Q 044899 88 RVLGLILVSPI 98 (299)
Q Consensus 88 ~v~~lvl~~~~ 98 (299)
.|.|....+.+
T Consensus 191 iv~GAlAaSAP 201 (492)
T KOG2183|consen 191 IVLGALAASAP 201 (492)
T ss_pred hhhhhhhccCc
Confidence 98887766643
No 177
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.01 E-value=0.016 Score=48.29 Aligned_cols=80 Identities=18% Similarity=0.167 Sum_probs=57.1
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh-----hhhcceEE
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ-----ERVLGLIL 94 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl 94 (299)
...+++.|+.-.. |. . ........+.+.++-...+++..|.++++|+|-|.||.+++.+..... ..-+++||
T Consensus 154 ~~SILvLDYsLt~-~~-~-~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iL 230 (374)
T PF10340_consen 154 EVSILVLDYSLTS-SD-E-HGHKYPTQLRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAIL 230 (374)
T ss_pred CCeEEEEeccccc-cc-c-CCCcCchHHHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEE
Confidence 5588888886553 00 0 011234567777777788887778889999999999999999875421 12579999
Q ss_pred eccCCCCC
Q 044899 95 VSPICKAP 102 (299)
Q Consensus 95 ~~~~~~~~ 102 (299)
++|.....
T Consensus 231 ISPWv~l~ 238 (374)
T PF10340_consen 231 ISPWVNLV 238 (374)
T ss_pred ECCCcCCc
Confidence 99987654
No 178
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.92 E-value=0.0035 Score=48.82 Aligned_cols=37 Identities=16% Similarity=0.155 Sum_probs=30.1
Q ss_pred CcEEEEeeChhHHHHHHHHHhh----hhhhcceEEeccCCC
Q 044899 64 EKVLCLGVTAGAYILTLFAMKY----QERVLGLILVSPICK 100 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~~ 100 (299)
+++++.|||.||.+|...+... .++|.++...+++..
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3699999999999999998874 357888888887554
No 179
>PLN02454 triacylglycerol lipase
Probab=96.91 E-value=0.0032 Score=52.99 Aligned_cols=34 Identities=29% Similarity=0.428 Sum_probs=24.4
Q ss_pred HHHHHHHHHhCCCc--EEEEeeChhHHHHHHHHHhh
Q 044899 52 EQVAEVLDFFGLEK--VLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 52 ~dl~~~l~~l~~~~--~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..|..+++.....+ +++.|||+||.+|+..|...
T Consensus 214 ~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 214 AKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 33444455444444 99999999999999998654
No 180
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.91 E-value=0.0027 Score=55.54 Aligned_cols=52 Identities=12% Similarity=0.208 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHh----CCCcEEEEeeChhHHHHHHHHHhh---------------hhhhcceEEeccCC
Q 044899 48 DDLAEQVAEVLDFF----GLEKVLCLGVTAGAYILTLFAMKY---------------QERVLGLILVSPIC 99 (299)
Q Consensus 48 ~~~~~dl~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~---------------p~~v~~lvl~~~~~ 99 (299)
+.+...+..+++.. +.++|+|+||||||.+++.+.... ...|++.|.++++.
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 45555566666533 357999999999999999987532 23478888888754
No 181
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.88 E-value=0.003 Score=56.63 Aligned_cols=77 Identities=17% Similarity=0.122 Sum_probs=47.9
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CC---------CcEEEEeeChhHHHHHHHH
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF----GL---------EKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l----~~---------~~~~lvGhS~Gg~ia~~~a 82 (299)
.....|+.+++|+-+-= |. ....++.+.++-+.+.++.+ .. ..|+++||||||++|...+
T Consensus 128 d~~~~~DFFaVDFnEe~-tA------m~G~~l~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~ 200 (973)
T KOG3724|consen 128 DNPFSFDFFAVDFNEEF-TA------MHGHILLDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATL 200 (973)
T ss_pred cCccccceEEEcccchh-hh------hccHhHHHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHH
Confidence 34457888999986621 11 22346666666655555432 11 2499999999999998776
Q ss_pred Hh---hhhhhcceEEeccCC
Q 044899 83 MK---YQERVLGLILVSPIC 99 (299)
Q Consensus 83 ~~---~p~~v~~lvl~~~~~ 99 (299)
.. .++.|.-++..+++.
T Consensus 201 tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 201 TLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred hhhhhccchhhhhhhhcCcc
Confidence 42 244566666666543
No 182
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.86 E-value=0.0022 Score=50.44 Aligned_cols=50 Identities=20% Similarity=0.349 Sum_probs=39.6
Q ss_pred HHHHHHHHHHH-h--CCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 50 LAEQVAEVLDF-F--GLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 50 ~~~dl~~~l~~-l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+.+++.-+++. . +.++-.++|||+||.+++.....+|+.+...++++|..
T Consensus 120 L~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 120 LTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 33445555554 2 33468999999999999999999999999999999853
No 183
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=96.78 E-value=0.006 Score=50.90 Aligned_cols=78 Identities=14% Similarity=0.140 Sum_probs=64.9
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC---CCcEEEEeeChhHHHHHHHHHhhhhhhcceEEec
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG---LEKVLCLGVTAGAYILTLFAMKYQERVLGLILVS 96 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 96 (299)
+-+-+.+++|-+|.|.+. +.+....+++..+.|...+++.+. .++.+--|-|-||+.++.+=.-||+.|++.|.--
T Consensus 88 d~NQl~vEhRfF~~SrP~-p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYV 166 (448)
T PF05576_consen 88 DGNQLSVEHRFFGPSRPE-PADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYV 166 (448)
T ss_pred ccceEEEEEeeccCCCCC-CCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeee
Confidence 446788999999998754 566778899999999999988875 3588999999999999988888899999988754
Q ss_pred cC
Q 044899 97 PI 98 (299)
Q Consensus 97 ~~ 98 (299)
.+
T Consensus 167 AP 168 (448)
T PF05576_consen 167 AP 168 (448)
T ss_pred cc
Confidence 43
No 184
>PLN02571 triacylglycerol lipase
Probab=96.77 E-value=0.0044 Score=52.25 Aligned_cols=38 Identities=24% Similarity=0.348 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhh
Q 044899 48 DDLAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+++.++|..+++....+ ++++.|||+||.+|+..|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 34556677777766543 689999999999999988753
No 185
>PLN02606 palmitoyl-protein thioesterase
Probab=96.70 E-value=0.06 Score=43.56 Aligned_cols=53 Identities=9% Similarity=0.062 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHHHHH---hCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEEeccCC
Q 044899 46 NVDDLAEQVAEVLDF---FGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLILVSPIC 99 (299)
Q Consensus 46 ~~~~~~~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 99 (299)
.+.+.++.+.+-+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 75 ~~~~Qv~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 75 PLRQQASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred CHHHHHHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 444444444444433 33 359999999999999999999977 499999998643
No 186
>KOG3101 consensus Esterase D [General function prediction only]
Probab=96.69 E-value=0.0018 Score=48.66 Aligned_cols=51 Identities=18% Similarity=0.273 Sum_probs=39.8
Q ss_pred HHHHHHHHHH----hCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCC
Q 044899 51 AEQVAEVLDF----FGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKA 101 (299)
Q Consensus 51 ~~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 101 (299)
++.|.++++. +...++.|+||||||.=|+..+.+.|.+.+++-..+|...+
T Consensus 124 ~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP 178 (283)
T KOG3101|consen 124 VKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNP 178 (283)
T ss_pred HHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCc
Confidence 4556666653 22347899999999999999999999999998888876654
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=96.59 E-value=0.0049 Score=49.25 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=32.3
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
.-+|+|.|+||.+++..+..||+++-.++..++...
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 458999999999999999999999999999888653
No 188
>PLN02162 triacylglycerol lipase
Probab=96.57 E-value=0.0062 Score=51.89 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.+.+.+.+++......++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34455555666655568999999999999999865
No 189
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.50 E-value=0.011 Score=52.35 Aligned_cols=79 Identities=19% Similarity=0.157 Sum_probs=51.5
Q ss_pred CcEEEEECCC-C---CCCCCCCCCCCCCCCCHHHHH---HHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHh--hhhh
Q 044899 20 NFCIYHIDAS-G---HELGADEIYSDFPLLNVDDLA---EQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMK--YQER 88 (299)
Q Consensus 20 ~~~vi~~D~~-G---~G~S~~~~~~~~~~~~~~~~~---~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~--~p~~ 88 (299)
++.|+.+++| | ++.+.. ........+.|.. +.+.+-++.+|.+ +|.|+|+|.||..+..++.. .+..
T Consensus 125 ~~~vv~~~yRlg~~g~~~~~~--~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~l 202 (493)
T cd00312 125 NVIVVSINYRLGVLGFLSTGD--IELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGL 202 (493)
T ss_pred CEEEEEecccccccccccCCC--CCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHH
Confidence 3999999999 4 332211 1111223344443 3444455566654 89999999999999888765 3567
Q ss_pred hcceEEeccCCC
Q 044899 89 VLGLILVSPICK 100 (299)
Q Consensus 89 v~~lvl~~~~~~ 100 (299)
++++|+.++...
T Consensus 203 f~~~i~~sg~~~ 214 (493)
T cd00312 203 FHRAISQSGSAL 214 (493)
T ss_pred HHHHhhhcCCcc
Confidence 999999887554
No 190
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.47 E-value=0.11 Score=42.19 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHH---hCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEEeccCC
Q 044899 45 LNVDDLAEQVAEVLDF---FGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLILVSPIC 99 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 99 (299)
..+.+.++.+.+-+.. +. +-++++|+|.||.++-.++.+.|+ .|+.+|.+++.-
T Consensus 73 ~~~~~Qve~vce~l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 73 MPLTQQAEIACEKVKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred eCHHHHHHHHHHHHhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 3455555555444433 33 359999999999999999999987 599999998643
No 191
>PLN00413 triacylglycerol lipase
Probab=96.47 E-value=0.0093 Score=50.97 Aligned_cols=35 Identities=20% Similarity=0.323 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.+.+.+..+++.....++++.|||+||.+|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 45667777777776678999999999999999885
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.47 E-value=0.015 Score=43.80 Aligned_cols=51 Identities=16% Similarity=0.186 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHh------hhhhhcceEEeccCCC
Q 044899 50 LAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMK------YQERVLGLILVSPICK 100 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~~~ 100 (299)
+.+.+.+....-...+++|+|+|.||.++..++.. ..++|.++++++-+..
T Consensus 67 ~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 67 LVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 33334444444455699999999999999999877 3568899999986543
No 193
>PLN02408 phospholipase A1
Probab=96.41 E-value=0.01 Score=49.40 Aligned_cols=38 Identities=29% Similarity=0.412 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhhhh
Q 044899 50 LAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
+.++|..+++..+.+ .+++.|||+||.+|...|.....
T Consensus 184 Vl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 184 VREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 345566666665543 58999999999999999876543
No 194
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.40 E-value=0.0042 Score=48.39 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhCC--CcEEEEeeChhHHHHHHHHH
Q 044899 50 LAEQVAEVLDFFGL--EKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 50 ~~~dl~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~ 83 (299)
++++|.+.++.... .++++|||||||.++-.+..
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 44444444444444 38999999999999865554
No 195
>COG0627 Predicted esterase [General function prediction only]
Probab=96.34 E-value=0.0046 Score=50.69 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=44.1
Q ss_pred CCHHHH-HHHHHHHHH-HhCC----CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCCC
Q 044899 45 LNVDDL-AEQVAEVLD-FFGL----EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKAP 102 (299)
Q Consensus 45 ~~~~~~-~~dl~~~l~-~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 102 (299)
+.++++ .+++-+.++ +... +.-.++||||||.=|+.+|.++|+++..+.-.++.....
T Consensus 127 ~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 127 YQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred cchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 555554 456664444 3332 267899999999999999999999999999999876654
No 196
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.33 E-value=0.0097 Score=46.23 Aligned_cols=56 Identities=14% Similarity=0.290 Sum_probs=43.2
Q ss_pred CCHHHHHHHHHHHHHH----hCCCcEEEEeeChhHHHHHHHHHhhhh-----hhcceEEeccCCC
Q 044899 45 LNVDDLAEQVAEVLDF----FGLEKVLCLGVTAGAYILTLFAMKYQE-----RVLGLILVSPICK 100 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 100 (299)
-+..++...+..++.. .++.++.+|||||||.-...|+..+.. .++.+|.++....
T Consensus 113 ~s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 113 ASGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred CchhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 4566666666666655 467799999999999999999988732 3889999887654
No 197
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.31 E-value=0.012 Score=44.89 Aligned_cols=41 Identities=15% Similarity=0.144 Sum_probs=33.0
Q ss_pred CCHHHHHHHHHHHHHHhCC-CcEEEEeeChhHHHHHHHHHhh
Q 044899 45 LNVDDLAEQVAEVLDFFGL-EKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..+.|..+....+|++.+. ++++|+|||.|+.+..++..++
T Consensus 75 ~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 75 LAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4566666777777888754 4999999999999999998765
No 198
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.15 E-value=0.015 Score=43.28 Aligned_cols=54 Identities=22% Similarity=0.193 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHhCC-----CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 47 VDDLAEQVAEVLDFFGL-----EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
-+.-+.+|..+++.|.. .++.++|||+|+.++-..+...+..++.+|+++++..
T Consensus 87 A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 87 ARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 34455677777766542 3789999999999998888776778999999987543
No 199
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.05 E-value=0.023 Score=48.60 Aligned_cols=81 Identities=14% Similarity=0.133 Sum_probs=64.9
Q ss_pred CcEEEEECCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHhCC-------CcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 20 NFCIYHIDASGHELGADEIYS---DFPLLNVDDLAEQVAEVLDFFGL-------EKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~~~dl~~~l~~l~~-------~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
|-.|+..++|-+|.|.+.... .....+......|++.+|+++.. .+++.+|-|.-|.++..+=.+||+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 889999999999988532111 11234677788899999988753 28999999999999999999999999
Q ss_pred cceEEeccCCC
Q 044899 90 LGLILVSPICK 100 (299)
Q Consensus 90 ~~lvl~~~~~~ 100 (299)
.|.|..+++..
T Consensus 198 ~GsvASSapv~ 208 (514)
T KOG2182|consen 198 VGSVASSAPVL 208 (514)
T ss_pred eeeccccccee
Confidence 99988887654
No 200
>PLN02324 triacylglycerol lipase
Probab=96.01 E-value=0.021 Score=48.25 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhh
Q 044899 50 LAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.++|..+++....+ .+++.|||+||.+|+..|...
T Consensus 199 Vl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 199 VQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 344566666665543 589999999999999988653
No 201
>COG3150 Predicted esterase [General function prediction only]
Probab=96.00 E-value=0.018 Score=41.77 Aligned_cols=54 Identities=15% Similarity=0.297 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 44 LLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
..+....++.+..++..++.+...|+|-|+||+.|.+++.++. ++ .|+++|+..
T Consensus 39 ~h~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ir-av~~NPav~ 92 (191)
T COG3150 39 PHDPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IR-AVVFNPAVR 92 (191)
T ss_pred CCCHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Ch-hhhcCCCcC
Confidence 3578899999999999999888999999999999999998874 33 456677654
No 202
>PLN02934 triacylglycerol lipase
Probab=95.92 E-value=0.015 Score=50.11 Aligned_cols=36 Identities=17% Similarity=0.242 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHh
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.+...+..+++.....++++.|||+||.+|..+|..
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHH
Confidence 355667777777666789999999999999998753
No 203
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.77 E-value=0.039 Score=45.76 Aligned_cols=41 Identities=22% Similarity=0.324 Sum_probs=32.6
Q ss_pred hCCCcEEEEeeChhHHHHHHHHHhhhhh-----hcceEEeccCCCC
Q 044899 61 FGLEKVLCLGVTAGAYILTLFAMKYQER-----VLGLILVSPICKA 101 (299)
Q Consensus 61 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-----v~~lvl~~~~~~~ 101 (299)
.|.+|+.|||||+|+.+.........++ |+.+++++.+...
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 3667999999999999988887665554 8899999875543
No 204
>PLN02719 triacylglycerol lipase
Probab=95.71 E-value=0.035 Score=48.00 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEeeChhHHHHHHHHHhh
Q 044899 50 LAEQVAEVLDFFGL-----EKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 50 ~~~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.|..+++.... -++++.|||+||.+|+..|...
T Consensus 279 Vl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 279 VLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 34445555555432 2799999999999999988654
No 205
>PLN02753 triacylglycerol lipase
Probab=95.70 E-value=0.035 Score=48.15 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhCC-----CcEEEEeeChhHHHHHHHHHhh
Q 044899 50 LAEQVAEVLDFFGL-----EKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 50 ~~~dl~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.|..+++..+. -++++.|||+||.+|+..|...
T Consensus 293 Vl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 293 ILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 34455566665532 3799999999999999998643
No 206
>PLN02802 triacylglycerol lipase
Probab=95.66 E-value=0.033 Score=48.14 Aligned_cols=36 Identities=19% Similarity=0.284 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhh
Q 044899 50 LAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.++|..+++....+ .+++.|||+||.+|...|...
T Consensus 314 Vl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 314 VVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 344556666655433 689999999999999988755
No 207
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.64 E-value=0.019 Score=48.77 Aligned_cols=53 Identities=11% Similarity=0.224 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--------hhcceEEeccC
Q 044899 46 NVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--------RVLGLILVSPI 98 (299)
Q Consensus 46 ~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 98 (299)
.+..+..-++.....-|.+|++||+|||||.+.+.+...+++ .+++++-+++.
T Consensus 164 yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 164 YLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 344444444444445566899999999999999999988765 36777776653
No 208
>PLN02310 triacylglycerol lipase
Probab=95.55 E-value=0.026 Score=47.67 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhC---C-CcEEEEeeChhHHHHHHHHHhh
Q 044899 49 DLAEQVAEVLDFFG---L-EKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 49 ~~~~dl~~~l~~l~---~-~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+.+.+..+++.+. . -++++.|||+||.+|+..|...
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 34455666666553 1 2689999999999999988543
No 209
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.47 E-value=0.049 Score=47.25 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhCC----CcEEEEeeChhHHHHHHHHHhh
Q 044899 50 LAEQVAEVLDFFGL----EKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 50 ~~~dl~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.++|..+++.+.. -.+++.|||+||.+|+..|...
T Consensus 300 Vl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 300 VMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 44566667765542 2699999999999999988653
No 210
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=95.25 E-value=0.22 Score=44.27 Aligned_cols=86 Identities=14% Similarity=0.083 Sum_probs=62.4
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCC----CCCCCCHHHHHHHHHHHHHHh--CCCcEEEEeeChhHHHHHHHHHhhhhh
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYS----DFPLLNVDDLAEQVAEVLDFF--GLEKVLCLGVTAGAYILTLFAMKYQER 88 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~----~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~ 88 (299)
.++..|+-....|.||=|+-...=-. .....+++|+......+++.- ..++..+.|.|-||.++-.++.++|+.
T Consensus 494 ~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdL 573 (712)
T KOG2237|consen 494 SLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDL 573 (712)
T ss_pred EEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchH
Confidence 34567888888899997643211000 012357788877777777652 234789999999999999999999999
Q ss_pred hcceEEeccCCC
Q 044899 89 VLGLILVSPICK 100 (299)
Q Consensus 89 v~~lvl~~~~~~ 100 (299)
+.++|+--|+..
T Consensus 574 F~avia~VpfmD 585 (712)
T KOG2237|consen 574 FGAVIAKVPFMD 585 (712)
T ss_pred hhhhhhcCccee
Confidence 999998877653
No 211
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.20 E-value=0.15 Score=38.68 Aligned_cols=90 Identities=8% Similarity=0.052 Sum_probs=55.9
Q ss_pred cCHhhHhhhhcCcEEEEECCCC---CCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHhCCCcEEEEeeChhHHHHHHHHHh
Q 044899 9 FCPDAASLLLHNFCIYHIDASG---HELGADEIYSDFPLLNVDDLAE-QVAEVLDFFGLEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~~~~~~~-dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
+-|.+....+.||.|+..+.-- +-++... + .....+..+.+. -...++.....+.+.++.||.||...+.+..+
T Consensus 133 QiPyi~rAv~~Gygviv~N~N~~~kfye~k~n-p-~kyirt~veh~~yvw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~ 210 (297)
T KOG3967|consen 133 QIPYIKRAVAEGYGVIVLNPNRERKFYEKKRN-P-QKYIRTPVEHAKYVWKNIVLPAKAESVFVVAHSYGGSLTLDLVER 210 (297)
T ss_pred cChHHHHHHHcCCcEEEeCCchhhhhhhcccC-c-chhccchHHHHHHHHHHHhcccCcceEEEEEeccCChhHHHHHHh
Confidence 3455677788899999988642 1111110 1 011112222222 22334444556789999999999999999999
Q ss_pred hhh--hhcceEEeccCCC
Q 044899 85 YQE--RVLGLILVSPICK 100 (299)
Q Consensus 85 ~p~--~v~~lvl~~~~~~ 100 (299)
+|+ +|.++.+.+.+..
T Consensus 211 f~~d~~v~aialTDs~~~ 228 (297)
T KOG3967|consen 211 FPDDESVFAIALTDSAMG 228 (297)
T ss_pred cCCccceEEEEeeccccc
Confidence 974 6777777776543
No 212
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=95.10 E-value=0.3 Score=40.40 Aligned_cols=64 Identities=14% Similarity=0.054 Sum_probs=43.7
Q ss_pred ccCCcceEEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhcCCcc
Q 044899 184 KELQCKTLIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGFGYCK 251 (299)
Q Consensus 184 ~~i~~Pvl~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~~~ 251 (299)
.++..|-.++.|..|.+. +.+....+.++. ...+..+|+..|... +..+...+..|+...+..+
T Consensus 326 ~RLalpKyivnaSgDdff~pDsa~lYyd~LPG-~kaLrmvPN~~H~~~---n~~i~esl~~flnrfq~~~ 391 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPDSANLYYDDLPG-EKALRMVPNDPHNLI---NQFIKESLEPFLNRFQMYP 391 (507)
T ss_pred hhccccceeecccCCcccCCCccceeeccCCC-ceeeeeCCCCcchhh---HHHHHHHHHHHHHHHhcCC
Confidence 467889999999888766 455666677774 466888999999654 3445556666666554443
No 213
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=95.08 E-value=0.093 Score=46.02 Aligned_cols=87 Identities=17% Similarity=0.232 Sum_probs=58.5
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCC--CCCCCCCC--------CCHHHHHHHHHHHHHHh-C--CCcEEEEeeChhHHHHH
Q 044899 13 AASLLLHNFCIYHIDASGHELGAD--EIYSDFPL--------LNVDDLAEQVAEVLDFF-G--LEKVLCLGVTAGAYILT 79 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~--~~~~~~~~--------~~~~~~~~dl~~~l~~l-~--~~~~~lvGhS~Gg~ia~ 79 (299)
+...+..||.++.=|- ||..+.. ........ .++.+.+.--+++++.+ + .+.-+..|.|-||.-++
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl 130 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGL 130 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHH
Confidence 4567889999999998 7765532 10100111 12222233333444443 2 34678999999999999
Q ss_pred HHHHhhhhhhcceEEeccCCC
Q 044899 80 LFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 80 ~~a~~~p~~v~~lvl~~~~~~ 100 (299)
..|.+||+.+++||.-+|...
T Consensus 131 ~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 131 MAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHhChhhcCeEEeCCchHH
Confidence 999999999999999998764
No 214
>PLN02761 lipase class 3 family protein
Probab=95.00 E-value=0.048 Score=47.31 Aligned_cols=35 Identities=17% Similarity=0.347 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhC----C--CcEEEEeeChhHHHHHHHHHh
Q 044899 50 LAEQVAEVLDFFG----L--EKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 50 ~~~dl~~~l~~l~----~--~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
+.+.|..+++..+ . -++++.|||+||.+|+..|..
T Consensus 274 Vl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 274 VLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYD 314 (527)
T ss_pred HHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHH
Confidence 4455566666552 1 269999999999999988864
No 215
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=94.82 E-value=3.7 Score=40.00 Aligned_cols=57 Identities=21% Similarity=0.124 Sum_probs=43.8
Q ss_pred CCCHHHHHHHHHHHHHHhCC-CcEEEEeeChhHHHHHHHHHhhhh--hhcceEEeccCCC
Q 044899 44 LLNVDDLAEQVAEVLDFFGL-EKVLCLGVTAGAYILTLFAMKYQE--RVLGLILVSPICK 100 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 100 (299)
..++++.+.-...-++.+.. .|..++|+|+|+.++..+|....+ ....+|++++.+.
T Consensus 2161 ~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2161 LDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred cchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCchH
Confidence 45788888777766776654 489999999999999999976533 3566899987654
No 216
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=94.78 E-value=0.22 Score=42.91 Aligned_cols=96 Identities=16% Similarity=0.085 Sum_probs=59.1
Q ss_pred CcccccccCHhhHhhhhcC-cEEEEECCCC--CCCCCCCCCC--C--CCCCCHHHHH---HHHHHHHHHhCCC--cEEEE
Q 044899 2 FCFQGLFFCPDAASLLLHN-FCIYHIDASG--HELGADEIYS--D--FPLLNVDDLA---EQVAEVLDFFGLE--KVLCL 69 (299)
Q Consensus 2 ~c~~~~~~~~~~~~~l~~~-~~vi~~D~~G--~G~S~~~~~~--~--~~~~~~~~~~---~dl~~~l~~l~~~--~~~lv 69 (299)
+|.+.++.- ..+.++| +-|+.+++|= .|.=+...-. + .....+.|.+ +.+.+-|+++|.+ .|.|+
T Consensus 109 s~s~~~ydg---s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~ 185 (491)
T COG2272 109 SGSEPLYDG---SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLF 185 (491)
T ss_pred CCcccccCh---HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHHhCCCccceEEe
Confidence 444554443 3455666 8888888762 2211111000 0 0113444443 5566778888875 79999
Q ss_pred eeChhHHHHHHHHHh--hhhhhcceEEeccCCC
Q 044899 70 GVTAGAYILTLFAMK--YQERVLGLILVSPICK 100 (299)
Q Consensus 70 GhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 100 (299)
|+|-||+.++.+.+. ....++++|+.++...
T Consensus 186 GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 186 GESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred eccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 999999998887753 2357888888888765
No 217
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=94.70 E-value=0.071 Score=46.82 Aligned_cols=88 Identities=14% Similarity=0.063 Sum_probs=59.8
Q ss_pred HhhHhhhhcCcEEEEECCCCCCCCCCC----CCCCCCCCCHHHHHHHHHHHHHHhCC---CcEEEEeeChhHHHHHHHHH
Q 044899 11 PDAASLLLHNFCIYHIDASGHELGADE----IYSDFPLLNVDDLAEQVAEVLDFFGL---EKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 11 ~~~~~~l~~~~~vi~~D~~G~G~S~~~----~~~~~~~~~~~~~~~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+...|.+|...+.-++||=|+=... .........++|++.-+.++++. |+ +++.+.|-|=||.+.-....
T Consensus 441 ~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alT 519 (648)
T COG1505 441 GSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALT 519 (648)
T ss_pred hhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeec
Confidence 344667889999999999997754211 00111233455555555555443 33 37889999999999888888
Q ss_pred hhhhhhcceEEeccCC
Q 044899 84 KYQERVLGLILVSPIC 99 (299)
Q Consensus 84 ~~p~~v~~lvl~~~~~ 99 (299)
++||.+.++|+--|..
T Consensus 520 QrPelfgA~v~evPll 535 (648)
T COG1505 520 QRPELFGAAVCEVPLL 535 (648)
T ss_pred cChhhhCceeeccchh
Confidence 9999998888776643
No 218
>PLN02847 triacylglycerol lipase
Probab=94.64 E-value=0.073 Score=46.96 Aligned_cols=24 Identities=17% Similarity=0.092 Sum_probs=19.8
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhh
Q 044899 62 GLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 62 ~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..-+++++|||+||.+|..++...
T Consensus 249 PdYkLVITGHSLGGGVAALLAilL 272 (633)
T PLN02847 249 PDFKIKIVGHSLGGGTAALLTYIL 272 (633)
T ss_pred CCCeEEEeccChHHHHHHHHHHHH
Confidence 334799999999999999988653
No 219
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=94.48 E-value=0.29 Score=38.36 Aligned_cols=34 Identities=24% Similarity=0.254 Sum_probs=27.8
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccC
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPI 98 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 98 (299)
|++-+|||||+-+-+.+...++..-++-|+++-.
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFN 124 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFN 124 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecC
Confidence 6788999999999998888776555777888754
No 220
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=94.39 E-value=0.084 Score=44.08 Aligned_cols=38 Identities=13% Similarity=0.319 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 48 DDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
..+.+++..+++....-.+.+.|||+||.+|...|..-
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHH
Confidence 46677788888888766899999999999999888653
No 221
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=94.17 E-value=0.066 Score=40.13 Aligned_cols=63 Identities=10% Similarity=0.020 Sum_probs=45.8
Q ss_pred ccC-CcceEEEecCCCCCC-----chhHHHHHhhCCCceeEEEEcCCCCcccccC---hHhHHHHHHHHHhh
Q 044899 184 KEL-QCKTLIFVGESSPFH-----TESLHMSATMGSKNCGLVEVQACGSLVTEEY---PLAMLIPIELFLMG 246 (299)
Q Consensus 184 ~~i-~~Pvl~i~G~~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~~ 246 (299)
+.| ++++|-|-|+.|.++ ..+..+...++......++.+|+||+..+.- .+++.-.|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 344 467788999999998 2444555666655677888899999877643 35588889999875
No 222
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.71 E-value=0.14 Score=43.18 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=31.1
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
|++++|+|.||++|...|.-.|-.+++++=-++.+.
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999888998888776666544
No 223
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=93.37 E-value=1 Score=35.75 Aligned_cols=79 Identities=14% Similarity=0.172 Sum_probs=48.4
Q ss_pred hHhhhh--cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEeeChhHHHHHHHHHhhhh-
Q 044899 13 AASLLL--HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG--LEKVLCLGVTAGAYILTLFAMKYQE- 87 (299)
Q Consensus 13 ~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~- 87 (299)
+.+++. .|..|++.|. |-|-- +.....+.+.++.+.+.+.... .+-++++|.|.||.++-.++...++
T Consensus 44 ~~q~l~~~~g~~v~~lei-g~g~~------~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~p 116 (296)
T KOG2541|consen 44 LTQLLEELPGSPVYCLEI-GDGIK------DSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNP 116 (296)
T ss_pred HHHHHHhCCCCeeEEEEe-cCCcc------hhhhccHHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCC
Confidence 334443 4888999987 55510 0112234444444444433211 1468999999999999998876643
Q ss_pred hhcceEEeccC
Q 044899 88 RVLGLILVSPI 98 (299)
Q Consensus 88 ~v~~lvl~~~~ 98 (299)
.|...|-++++
T Consensus 117 pV~n~ISL~gP 127 (296)
T KOG2541|consen 117 PVKNFISLGGP 127 (296)
T ss_pred CcceeEeccCC
Confidence 47788877754
No 224
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.01 E-value=0.17 Score=44.44 Aligned_cols=56 Identities=14% Similarity=0.301 Sum_probs=36.4
Q ss_pred CCHHHHHHHHHHHHHHhCC---CcEEEEeeChhHHHHHHHHHhh-----hh------hhcceEEeccCCC
Q 044899 45 LNVDDLAEQVAEVLDFFGL---EKVLCLGVTAGAYILTLFAMKY-----QE------RVLGLILVSPICK 100 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~-----p~------~v~~lvl~~~~~~ 100 (299)
.++..-...+...+...++ ++++.+||||||.++=.+...- |+ ..+|+|+++.+-.
T Consensus 504 ~sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 504 RSLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 3455445555555555544 4899999999998887665432 32 3567888776543
No 225
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=92.99 E-value=0.62 Score=36.46 Aligned_cols=63 Identities=11% Similarity=0.062 Sum_probs=39.7
Q ss_pred CcEEEEECCCCCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHh--CCCcEEEEeeChhHHHHHHHHHhh
Q 044899 20 NFCIYHIDASGHELGADEI---YSDFPLLNVDDLAEQVAEVLDFF--GLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
|+++..+++|.. -.+. .......++.+=++.+.+.++.. ..++++++|+|+||.++...+.+.
T Consensus 2 ~~~~~~V~YPa~---f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPAS---FWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCch---hcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 677778888772 1110 00012235555555666666541 336899999999999999988765
No 226
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=91.48 E-value=0.6 Score=40.48 Aligned_cols=78 Identities=17% Similarity=0.207 Sum_probs=53.1
Q ss_pred CcEEEEEC-CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCC--CcEEEEeeChhHHHHHHHHHhhhh--
Q 044899 20 NFCIYHID-ASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF-------FGL--EKVLCLGVTAGAYILTLFAMKYQE-- 87 (299)
Q Consensus 20 ~~~vi~~D-~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~--~~~~lvGhS~Gg~ia~~~a~~~p~-- 87 (299)
.-.++-+| .-|.|.|... .+....++....+|+..+.+. ... .+.+|+|-|.||.-+..+|...-+
T Consensus 146 ~adLvFiDqPvGTGfS~a~--~~e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~ 223 (498)
T COG2939 146 FADLVFIDQPVGTGFSRAL--GDEKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN 223 (498)
T ss_pred CCceEEEecCcccCccccc--ccccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc
Confidence 45788899 7799999751 223344555555666555543 332 489999999999999999876554
Q ss_pred -hhcceEEeccCC
Q 044899 88 -RVLGLILVSPIC 99 (299)
Q Consensus 88 -~v~~lvl~~~~~ 99 (299)
..++++++.+..
T Consensus 224 ~~~~~~~nlssvl 236 (498)
T COG2939 224 IALNGNVNLSSVL 236 (498)
T ss_pred cccCCceEeeeee
Confidence 367777776544
No 227
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=91.13 E-value=0.59 Score=41.83 Aligned_cols=82 Identities=18% Similarity=0.090 Sum_probs=49.2
Q ss_pred hhcCcEEEEECCCC----CCCCCCCCCCCC-CCCCHHHHHH---HHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhh-
Q 044899 17 LLHNFCIYHIDASG----HELGADEIYSDF-PLLNVDDLAE---QVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKY- 85 (299)
Q Consensus 17 l~~~~~vi~~D~~G----~G~S~~~~~~~~-~~~~~~~~~~---dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~- 85 (299)
..++.-|+.+.+|= +-.+.. .... ..+.+.|... .|.+-|..+|.+ +|.|+|||-||..+..+...-
T Consensus 153 ~~~~vivVt~nYRlg~~Gfl~~~~--~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~ 230 (535)
T PF00135_consen 153 ASKDVIVVTINYRLGAFGFLSLGD--LDAPSGNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPS 230 (535)
T ss_dssp HHHTSEEEEE----HHHHH-BSSS--TTSHBSTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGG
T ss_pred cCCCEEEEEecccccccccccccc--cccCchhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccc
Confidence 45689999999872 221111 1111 3445555544 445556666765 799999999999988877652
Q ss_pred -hhhhcceEEeccCCC
Q 044899 86 -QERVLGLILVSPICK 100 (299)
Q Consensus 86 -p~~v~~lvl~~~~~~ 100 (299)
...++++|+.++...
T Consensus 231 ~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 231 SKGLFHRAILQSGSAL 246 (535)
T ss_dssp GTTSBSEEEEES--TT
T ss_pred cccccccccccccccc
Confidence 247999999998543
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=90.89 E-value=0.51 Score=37.65 Aligned_cols=25 Identities=16% Similarity=0.437 Sum_probs=21.0
Q ss_pred hCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 61 FGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 61 l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
....++.|-|||+||.+|..+..++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 3445899999999999999988776
No 229
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=90.89 E-value=0.51 Score=37.65 Aligned_cols=25 Identities=16% Similarity=0.437 Sum_probs=21.0
Q ss_pred hCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 61 FGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 61 l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
....++.|-|||+||.+|..+..++
T Consensus 273 Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 273 YPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CCCceEEEeccccchHHHHHhcccc
Confidence 3445899999999999999988776
No 230
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=90.62 E-value=0.87 Score=36.67 Aligned_cols=78 Identities=22% Similarity=0.233 Sum_probs=44.1
Q ss_pred hcCcEEEEECCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEeeChhHHHHHHHHHhhhh-hhcceE
Q 044899 18 LHNFCIYHIDASGHELG-ADEIYSDFPLLNVDDLAEQVAEVLDFFG--LEKVLCLGVTAGAYILTLFAMKYQE-RVLGLI 93 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lv 93 (299)
-.|--|.++++ |-+.+ +.. ......+.+.++.+.+.+.... .+-++++|+|.||.++-.++.+.|+ .|+.+|
T Consensus 35 ~PG~yV~si~i-g~~~~~D~~---~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlI 110 (279)
T PF02089_consen 35 HPGTYVHSIEI-GNDPSEDVE---NSFFGNVNDQVEQVCEQLANDPELANGFNAIGFSQGGLFLRAYVQRCNDPPVHNLI 110 (279)
T ss_dssp STT--EEE--S-SSSHHHHHH---HHHHSHHHHHHHHHHHHHHH-GGGTT-EEEEEETCHHHHHHHHHHH-TSS-EEEEE
T ss_pred CCCceEEEEEE-CCCcchhhh---hhHHHHHHHHHHHHHHHHhhChhhhcceeeeeeccccHHHHHHHHHCCCCCceeEE
Confidence 35777888877 33221 100 0001245556666666555422 1469999999999999999999864 699999
Q ss_pred EeccCC
Q 044899 94 LVSPIC 99 (299)
Q Consensus 94 l~~~~~ 99 (299)
.+++.-
T Consensus 111 Slggph 116 (279)
T PF02089_consen 111 SLGGPH 116 (279)
T ss_dssp EES--T
T ss_pred EecCcc
Confidence 998643
No 231
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.34 E-value=0.4 Score=35.21 Aligned_cols=43 Identities=19% Similarity=0.226 Sum_probs=35.3
Q ss_pred HHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 57 VLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 57 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+++..-....++-|.||||..|..+.-++|+.+.++|.+++..
T Consensus 94 v~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 94 VIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred HHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 3443333467888999999999999999999999999998854
No 232
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=89.16 E-value=2.1 Score=37.23 Aligned_cols=80 Identities=15% Similarity=0.167 Sum_probs=51.3
Q ss_pred CcEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-------hCCCcEEEEeeChhHHHHHHHHHhh------
Q 044899 20 NFCIYHIDAS-GHELGADEIYSDFPLLNVDDLAEQVAEVLDF-------FGLEKVLCLGVTAGAYILTLFAMKY------ 85 (299)
Q Consensus 20 ~~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~------ 85 (299)
-.+++-+|.| |.|.|-...+.+. ..+-+..++|+..++.. ..-++++|.|-|.+|...-.+|..-
T Consensus 117 ~aNiLfLd~PvGvGFSYs~~~~~~-~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~ 195 (454)
T KOG1282|consen 117 EANILFLDQPVGVGFSYSNTSSDY-KTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKK 195 (454)
T ss_pred cccEEEEecCCcCCccccCCCCcC-cCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccc
Confidence 4578888876 7888854332221 13455556666655543 2446899999999998887777532
Q ss_pred ----hhhhcceEEeccCCC
Q 044899 86 ----QERVLGLILVSPICK 100 (299)
Q Consensus 86 ----p~~v~~lvl~~~~~~ 100 (299)
.-.++|+++-++...
T Consensus 196 ~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 196 CCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred ccCCcccceEEEecCcccC
Confidence 124677777776554
No 233
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=86.90 E-value=6.4 Score=28.77 Aligned_cols=34 Identities=6% Similarity=0.090 Sum_probs=26.2
Q ss_pred CcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 64 EKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+.+-||++|||-.+|-++..-. ++++.+.+++..
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~--~lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGI--RLKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhc--cccceeeecCCC
Confidence 4678999999999998887655 467777777543
No 234
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=84.26 E-value=5.9 Score=30.46 Aligned_cols=66 Identities=9% Similarity=0.032 Sum_probs=47.6
Q ss_pred hcCc-EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeCh----hHHHHHHHHHhhh-hhhcc
Q 044899 18 LHNF-CIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTA----GAYILTLFAMKYQ-ERVLG 91 (299)
Q Consensus 18 ~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~ 91 (299)
..|. +|+..|.++.. .|+.+.+++.+.++++..+ -.++|+|+|. |..++-++|++.. ..+..
T Consensus 74 ~~G~d~V~~~~~~~~~-----------~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsd 141 (202)
T cd01714 74 AMGADRAILVSDRAFA-----------GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITY 141 (202)
T ss_pred HcCCCEEEEEeccccc-----------CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccce
Confidence 3454 67777665542 4788999999999998877 5799999998 8889998888752 23444
Q ss_pred eEEe
Q 044899 92 LILV 95 (299)
Q Consensus 92 lvl~ 95 (299)
++-+
T Consensus 142 v~~l 145 (202)
T cd01714 142 VSKI 145 (202)
T ss_pred EEEE
Confidence 4443
No 235
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.24 E-value=3.9 Score=35.77 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=31.9
Q ss_pred HhCCCcEEEEeeChhHHHHHHHHHhh-----hhhhcceEEeccCCCC
Q 044899 60 FFGLEKVLCLGVTAGAYILTLFAMKY-----QERVLGLILVSPICKA 101 (299)
Q Consensus 60 ~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 101 (299)
..|.+||.|||+|+|+-+........ -+.|..+++++++...
T Consensus 443 ~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 443 SQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPT 489 (633)
T ss_pred ccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccC
Confidence 45778999999999999988665422 2358889999876544
No 236
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=80.04 E-value=2.5 Score=34.69 Aligned_cols=30 Identities=17% Similarity=0.230 Sum_probs=24.1
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+++..+|+++-.++|||+|-+.|+.++.
T Consensus 72 ~~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 445667889999999999999988876653
No 237
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=79.46 E-value=1.6 Score=36.23 Aligned_cols=29 Identities=24% Similarity=0.432 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHH
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 82 (299)
+.++++..|+.+-.++|||+|=+.|+.++
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHC
Confidence 45667788999999999999988777554
No 238
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=79.04 E-value=2.9 Score=34.32 Aligned_cols=30 Identities=17% Similarity=0.083 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+.+++...|+++..++|||+|=..|+.++.
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 455667778899999999999988877654
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=78.57 E-value=11 Score=25.22 Aligned_cols=83 Identities=13% Similarity=0.188 Sum_probs=53.6
Q ss_pred cCHhhHhhhhc-CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChh--HHHHHHHHHhh
Q 044899 9 FCPDAASLLLH-NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAG--AYILTLFAMKY 85 (299)
Q Consensus 9 ~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G--g~ia~~~a~~~ 85 (299)
-++.+.+++.. ||-.=.+.++..|.+....-. ....+.=...+..+++.+...++++||-|-- --+-..+|.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~---~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFK---SGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCcccccccc---CCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 34555666644 576667777777655322111 1111344567888899999889999997744 23445577889
Q ss_pred hhhhcceEE
Q 044899 86 QERVLGLIL 94 (299)
Q Consensus 86 p~~v~~lvl 94 (299)
|++|.++.+
T Consensus 89 P~~i~ai~I 97 (100)
T PF09949_consen 89 PGRILAIYI 97 (100)
T ss_pred CCCEEEEEE
Confidence 999988754
No 240
>PRK10279 hypothetical protein; Provisional
Probab=77.50 E-value=3.5 Score=33.91 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+.+.+++.++..-.++|.|+|+.++..||....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 455566678888899999999999999997543
No 241
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=77.33 E-value=6.1 Score=31.87 Aligned_cols=54 Identities=26% Similarity=0.295 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCC---cEEEEeeChhHHHHHHHHH---hhhhhhcceEEeccCCCCCch
Q 044899 51 AEQVAEVLDFFGLE---KVLCLGVTAGAYILTLFAM---KYQERVLGLILVSPICKAPSW 104 (299)
Q Consensus 51 ~~dl~~~l~~l~~~---~~~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~~~~~ 104 (299)
.+.+.+.++.+..+ +++|.|.|+|++-+...-. ..-+++++.++.+++.....+
T Consensus 93 ~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~~w 152 (289)
T PF10081_consen 93 FEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSPLW 152 (289)
T ss_pred HHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCChhH
Confidence 33444444555332 7999999999877665432 234579999999987665443
No 242
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=76.40 E-value=3.5 Score=33.64 Aligned_cols=30 Identities=23% Similarity=0.181 Sum_probs=23.3
Q ss_pred HHHHHHHhC-CCcEEEEeeChhHHHHHHHHH
Q 044899 54 VAEVLDFFG-LEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 54 l~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+..++...+ +.+..++|||+|=+.|+.++.
T Consensus 72 l~~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 72 LYLKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 344556667 889999999999988877664
No 243
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=75.83 E-value=4.3 Score=30.24 Aligned_cols=32 Identities=31% Similarity=0.273 Sum_probs=24.9
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.+++.++..-.+.|.|.|+.++..++...
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 34445555777778999999999999998754
No 244
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=75.77 E-value=8.3 Score=33.72 Aligned_cols=62 Identities=19% Similarity=0.306 Sum_probs=45.4
Q ss_pred CcceEEEecCCCCCCc--hhHHHHHhhC--------------C---------CceeEEEEcCCCCcccccChHhHHHHHH
Q 044899 187 QCKTLIFVGESSPFHT--ESLHMSATMG--------------S---------KNCGLVEVQACGSLVTEEYPLAMLIPIE 241 (299)
Q Consensus 187 ~~Pvl~i~G~~D~~~~--~~~~~~~~~~--------------~---------~~~~~~~~~~~gH~~~~e~p~~~~~~i~ 241 (299)
..+++|..|+.|.+++ ..+...+.+. . .+..+..+.||||+...++|+.....+.
T Consensus 363 ~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~ 442 (454)
T KOG1282|consen 363 GYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQ 442 (454)
T ss_pred ceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHH
Confidence 3799999999999884 2222212111 0 0244577889999999999999999999
Q ss_pred HHHhhcC
Q 044899 242 LFLMGFG 248 (299)
Q Consensus 242 ~fl~~~~ 248 (299)
.|+....
T Consensus 443 ~fl~g~~ 449 (454)
T KOG1282|consen 443 RFLNGQP 449 (454)
T ss_pred HHHcCCC
Confidence 9998754
No 245
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=74.59 E-value=4.5 Score=33.44 Aligned_cols=33 Identities=27% Similarity=0.377 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 53 QVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 53 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
-+.+.++..++..-+|.|.|+|+.++..+|.-+
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCC
Confidence 456667778888999999999999999999753
No 246
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=73.89 E-value=5 Score=33.15 Aligned_cols=33 Identities=27% Similarity=0.371 Sum_probs=26.6
Q ss_pred HHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 53 QVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 53 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
-+.+.+++.++..=.++|.|+||.++..+|..+
T Consensus 32 GvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 32 GVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 355566666887778999999999999999764
No 247
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.73 E-value=1.5 Score=37.10 Aligned_cols=33 Identities=30% Similarity=0.437 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
.+++++.+.+....++++.++|||+||.++..+
T Consensus 135 Rla~~~~e~~~~~si~kISfvghSLGGLvar~A 167 (405)
T KOG4372|consen 135 RLAEEVKETLYDYSIEKISFVGHSLGGLVARYA 167 (405)
T ss_pred ccHHHHhhhhhccccceeeeeeeecCCeeeeEE
Confidence 345555555555667899999999999886543
No 248
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=72.73 E-value=12 Score=30.80 Aligned_cols=79 Identities=16% Similarity=0.191 Sum_probs=54.4
Q ss_pred cEEEEECCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCcEEEEeeChhHHHHHHHHHhhhh-----
Q 044899 21 FCIYHIDAS-GHELGADEIYSDFPLLNVDDLAEQVAEVLDFF-------GLEKVLCLGVTAGAYILTLFAMKYQE----- 87 (299)
Q Consensus 21 ~~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p~----- 87 (299)
-.++-+|-| |.|.|-..- ......+....+.|+.++++.+ ...|++|+..|.||-+|..++...-+
T Consensus 72 adllfvDnPVGaGfSyVdg-~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G 150 (414)
T KOG1283|consen 72 ADLLFVDNPVGAGFSYVDG-SSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG 150 (414)
T ss_pred ccEEEecCCCcCceeeecC-cccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC
Confidence 456666654 788774331 2233456788899999999864 34589999999999999998865433
Q ss_pred ----hhcceEEeccCCC
Q 044899 88 ----RVLGLILVSPICK 100 (299)
Q Consensus 88 ----~v~~lvl~~~~~~ 100 (299)
.+.+++|-++...
T Consensus 151 ~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 151 EIKLNFIGVALGDSWIS 167 (414)
T ss_pred ceeecceeEEccCcccC
Confidence 2556666666554
No 249
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=72.28 E-value=5.7 Score=30.17 Aligned_cols=32 Identities=31% Similarity=0.427 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.++..++..=.++|.|.||.+|..++..+
T Consensus 17 vl~~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 17 ALKALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 33444555777778999999999999998743
No 250
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=71.59 E-value=6.3 Score=31.85 Aligned_cols=32 Identities=19% Similarity=0.292 Sum_probs=25.7
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.+++.++..=.+.|.|+|+.++..+|...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 45556677887668999999999999999764
No 251
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=70.68 E-value=6.9 Score=30.61 Aligned_cols=31 Identities=35% Similarity=0.347 Sum_probs=23.8
Q ss_pred HHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 55 AEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 55 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+.++..+++.-.++|.|.|+.++..+|..+
T Consensus 19 L~aL~e~gi~~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 19 LAALLEMGLEPSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHHcCCCceEEEEeCHHHHHHHHHHcCC
Confidence 3334445777778999999999999998644
No 252
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=70.06 E-value=12 Score=33.08 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=44.3
Q ss_pred cCCcceEEEecCCCCCCc--hhH----HHHHhhCCC------ceeEEEEcCCCCccccc--ChHhHHHHHHHHHhhc
Q 044899 185 ELQCKTLIFVGESSPFHT--ESL----HMSATMGSK------NCGLVEVQACGSLVTEE--YPLAMLIPIELFLMGF 247 (299)
Q Consensus 185 ~i~~Pvl~i~G~~D~~~~--~~~----~~~~~~~~~------~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~~ 247 (299)
+---.+++.||..|..++ ... ++.+.+... -.++..+||.+|+.--. .+-.....|.+|+++-
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G 427 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENG 427 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCC
Confidence 335689999999999982 222 333334321 37899999999976543 4556889999999864
No 253
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=68.38 E-value=6 Score=34.35 Aligned_cols=38 Identities=18% Similarity=0.201 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcc
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLG 91 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~ 91 (299)
+.+.+...++.+=++.|.|.|+.+|..++...++.+..
T Consensus 91 VLkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel~~ 128 (421)
T cd07230 91 VLKALFEANLLPRIISGSSAGSIVAAILCTHTDEEIPE 128 (421)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHH
Confidence 33444444666778999999999999999876665433
No 254
>PF03283 PAE: Pectinacetylesterase
Probab=67.60 E-value=33 Score=29.19 Aligned_cols=35 Identities=26% Similarity=0.123 Sum_probs=23.6
Q ss_pred CcEEEEeeChhHHHHHHHHHhh----hhhhcceEEeccC
Q 044899 64 EKVLCLGVTAGAYILTLFAMKY----QERVLGLILVSPI 98 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~ 98 (299)
++++|.|.|.||.-++..+... |..++-..+.++.
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG 194 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSG 194 (361)
T ss_pred ceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccc
Confidence 5899999999999988876543 4334444444443
No 255
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=67.53 E-value=9.5 Score=28.48 Aligned_cols=31 Identities=26% Similarity=0.307 Sum_probs=23.5
Q ss_pred HHHHHhCCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 56 EVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 56 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+.++..++..=.++|.|.|+.++..++..+.
T Consensus 20 ~~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 20 RALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3344556666689999999999999987653
No 256
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=66.81 E-value=45 Score=25.52 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=45.1
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEEe
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLILV 95 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~ 95 (299)
.+++.++.+|-+|.. ..-.+..+.+..+++......++++=-+..+.-.+..+..+-+ .+.++|+-
T Consensus 81 ~~~~D~vlIDT~Gr~------------~~d~~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 81 KKGYDLVLIDTAGRS------------PRDEELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HTTSSEEEEEE-SSS------------STHHHHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred hcCCCEEEEecCCcc------------hhhHHHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 358999999999983 2345667788888888876677766666556666655544433 36788875
Q ss_pred c
Q 044899 96 S 96 (299)
Q Consensus 96 ~ 96 (299)
-
T Consensus 149 K 149 (196)
T PF00448_consen 149 K 149 (196)
T ss_dssp S
T ss_pred e
Confidence 3
No 257
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=65.95 E-value=7.9 Score=34.71 Aligned_cols=32 Identities=19% Similarity=0.287 Sum_probs=25.2
Q ss_pred HHHHH-HHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 54 VAEVL-DFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 54 l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+++ +..|++|-.++|||+|=+.|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455 578999999999999999888877543
No 258
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=65.91 E-value=8 Score=31.96 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=28.3
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcce
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGL 92 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 92 (299)
+.+.+...++.+-++.|.|.|+.+|..++...++.+..+
T Consensus 86 VlkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~El~~~ 124 (323)
T cd07231 86 VVRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEELQSF 124 (323)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 334444457777789999999999999998666555443
No 259
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=65.84 E-value=5.9 Score=29.07 Aligned_cols=50 Identities=16% Similarity=0.257 Sum_probs=29.8
Q ss_pred ECCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHhC----CCcEEEEeeChhHH
Q 044899 26 IDASGHELGADEIYSDFPLLNVDDLAEQV----AEVLDFFG----LEKVLCLGVTAGAY 76 (299)
Q Consensus 26 ~D~~G~G~S~~~~~~~~~~~~~~~~~~dl----~~~l~~l~----~~~~~lvGhS~Gg~ 76 (299)
|-+-|||+.... ......++.+++++-+ ..+.+..+ .+++.|+|.|++..
T Consensus 59 w~lVGHG~~~~~-~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFN-NQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTS-SSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCC-CceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 446689976111 2223467889999888 45555543 35899999999887
No 260
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=65.53 E-value=6.7 Score=33.53 Aligned_cols=40 Identities=28% Similarity=0.398 Sum_probs=29.7
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceE
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLI 93 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 93 (299)
+...+...|+.+=++.|.|.|+.+|..+|...++.+..+.
T Consensus 101 v~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 101 VVKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 3444555577777899999999999999986666555544
No 261
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=65.51 E-value=6.5 Score=33.94 Aligned_cols=40 Identities=20% Similarity=0.260 Sum_probs=29.6
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceE
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLI 93 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 93 (299)
+.+.+...++.+=++.|.|.|+.+|..++...++.+..++
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~~ 124 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQLL 124 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHHH
Confidence 3334444467777899999999999999987776665543
No 262
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=64.92 E-value=15 Score=33.12 Aligned_cols=58 Identities=22% Similarity=0.189 Sum_probs=38.6
Q ss_pred CCCCHHHHHHH---HHHHHHHhCCC--cEEEEeeChhHHHHHHHHHh--hhhhhcceEEeccCCC
Q 044899 43 PLLNVDDLAEQ---VAEVLDFFGLE--KVLCLGVTAGAYILTLFAMK--YQERVLGLILVSPICK 100 (299)
Q Consensus 43 ~~~~~~~~~~d---l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 100 (299)
+.+.+.|+... +.+-|...|.+ +|.|+|||.||..+..+... ....+.++|.+++...
T Consensus 169 gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 169 GNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred CcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 34555555544 44556666654 79999999999998777642 1356777777776543
No 263
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=64.91 E-value=86 Score=26.55 Aligned_cols=213 Identities=12% Similarity=0.078 Sum_probs=103.5
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC--CCcEEEEeeChhHHHHHHHH-H---hh-h---
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG--LEKVLCLGVTAGAYILTLFA-M---KY-Q--- 86 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a-~---~~-p--- 86 (299)
...||.++-+-.|-+-..- .......++....+-+..++...+ ..++++--.|+||...+... . ++ |
T Consensus 63 q~~g~~~~~~tap~~~~~~---~~s~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~ 139 (350)
T KOG2521|consen 63 QDKGYIVVRITAPCPSVFL---SASRRILSLSLASTRLSELLSDYNSDPCPIIFHVFSGNGVRLMYSISLQLIKHEPKAA 139 (350)
T ss_pred hcCCceEEEecCccccccc---ccccccchhhHHHHHHHHHhhhccCCcCceEEEEecCCceeehHHHHHHHhhcCchhH
Confidence 4568899999888874221 122334566777777888887776 34777778999987765543 1 12 2
Q ss_pred hhhcceEEeccCCCCCchh-HHHHHHHHHHHHHhhcchhHHHHHHHhhhhhhcccCCCCCCchHHHHHHHHHHhcccchh
Q 044899 87 ERVLGLILVSPICKAPSWT-EWLYNKVLMNLLYFYGMCGVLKECLLQRYFSKEFRSGEHGAESDIIQACRRVLDQGQSLN 165 (299)
Q Consensus 87 ~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (299)
+.+.+++..+......... .+..... ....... ..+...-+......... ...-...+...+.......
T Consensus 140 ~~~~~~~fdS~p~~~~~~~~~~a~~~~-------~~~~~~~-~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~r 209 (350)
T KOG2521|consen 140 QLSGGIIFDSAPARSSPVQLGWAVSFS-------SPPDDYV-ARWARLNYHITLLTMAG--NEGGAYLLGPLAEKISMSR 209 (350)
T ss_pred hhcCCceEeccccccchhhhcceeccc-------cCchhhH-HHHHhcCeEEEEEEeee--cccchhhhhhhhhcccccc
Confidence 3466677776554422111 1100000 0000000 00000000000000000 0000000000000000000
Q ss_pred HHHHHHHHhhccchhhhhccCCcceEEEecCCCCCCc--hhHHHHHhhCCC--ceeEEEEcCCCCcccc-cChHhHHHHH
Q 044899 166 VMHFLQAINERHDLTKGLKELQCKTLIFVGESSPFHT--ESLHMSATMGSK--NCGLVEVQACGSLVTE-EYPLAMLIPI 240 (299)
Q Consensus 166 ~~~~~~~~~~~~~~~~~l~~i~~Pvl~i~G~~D~~~~--~~~~~~~~~~~~--~~~~~~~~~~gH~~~~-e~p~~~~~~i 240 (299)
...++..+ .+.-.....+.+.+.+..|.+++ ..+++.+..... +++-+-+.++-|..+. ..|..+.+..
T Consensus 210 ~~~~~~r~------~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~ 283 (350)
T KOG2521|consen 210 KYHFLDRY------EEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKC 283 (350)
T ss_pred chHHHHHH------HhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHH
Confidence 11111111 11111235678888899999983 444444433332 4556666788998776 6899999999
Q ss_pred HHHHhhcC
Q 044899 241 ELFLMGFG 248 (299)
Q Consensus 241 ~~fl~~~~ 248 (299)
.+|++...
T Consensus 284 ~~Fl~~~~ 291 (350)
T KOG2521|consen 284 SEFLRSVI 291 (350)
T ss_pred HHHHHhcc
Confidence 99998753
No 264
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=64.87 E-value=10 Score=29.54 Aligned_cols=33 Identities=27% Similarity=0.193 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhh
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
+.+.+++.+...=.+.|.|.|+.+|..++...+
T Consensus 16 vl~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 16 VLKALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 444455567766689999999999999998764
No 265
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=64.40 E-value=29 Score=25.31 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=35.0
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHH
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILT 79 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 79 (299)
+...+.+|-.|++.|.+|-- ++-+++++.+..+-+ .|-+=+.++|-|.|=--++
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~------------~sSe~fA~~l~~~~~-~G~~i~f~IGG~~Gl~~~~ 113 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKA------------LSSEEFADFLERLRD-DGRDISFLIGGADGLSEAV 113 (155)
T ss_pred HHHhcCCCCeEEEEecCCCc------------CChHHHHHHHHHHHh-cCCeEEEEEeCcccCCHHH
Confidence 44556678899999999862 455666666665443 3423356889888854443
No 266
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=62.48 E-value=18 Score=26.54 Aligned_cols=68 Identities=15% Similarity=0.142 Sum_probs=37.8
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
..+..+-.+|++|-.|. .++-.++++.+..+...-..+=+.++|-+.|=.-.+. ++.+..+.
T Consensus 62 ~~i~~~~~~i~Ld~~Gk------------~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~~~------~~a~~~lS 123 (155)
T PF02590_consen 62 KKIPPNDYVILLDERGK------------QLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSEEVR------KRADEKLS 123 (155)
T ss_dssp CTSHTTSEEEEE-TTSE------------E--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--HHHH------HH-SEEEE
T ss_pred hhccCCCEEEEEcCCCc------------cCChHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHH------hhcCceEE
Confidence 34456888999999986 3567778888887776633244679999998322221 23445566
Q ss_pred eccCCC
Q 044899 95 VSPICK 100 (299)
Q Consensus 95 ~~~~~~ 100 (299)
+++...
T Consensus 124 LS~mTf 129 (155)
T PF02590_consen 124 LSKMTF 129 (155)
T ss_dssp S-SS--
T ss_pred EecCCC
Confidence 666443
No 267
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=60.67 E-value=17 Score=26.98 Aligned_cols=31 Identities=29% Similarity=0.440 Sum_probs=23.0
Q ss_pred HHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 55 AEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 55 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+.++..+...=.++|.|.|+.+|..++...
T Consensus 19 l~~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 19 LKALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3334445666668999999999999988643
No 268
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=58.24 E-value=72 Score=27.82 Aligned_cols=69 Identities=14% Similarity=0.183 Sum_probs=55.3
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh--hcceE
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER--VLGLI 93 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lv 93 (299)
.-..+|.|+.+|-.|.= .--+++.+.+.++-+.+..+.+.+|--+|=|.-|...|..+-+. +.++|
T Consensus 178 ak~~~~DvvIvDTAGRl------------~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvI 245 (451)
T COG0541 178 AKEEGYDVVIVDTAGRL------------HIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVI 245 (451)
T ss_pred HHHcCCCEEEEeCCCcc------------cccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEE
Confidence 33458999999998851 23466788888888888889999999999999999999888664 67777
Q ss_pred Eec
Q 044899 94 LVS 96 (299)
Q Consensus 94 l~~ 96 (299)
+.-
T Consensus 246 lTK 248 (451)
T COG0541 246 LTK 248 (451)
T ss_pred EEc
Confidence 753
No 269
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=55.54 E-value=67 Score=28.12 Aligned_cols=65 Identities=20% Similarity=0.251 Sum_probs=45.7
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEEe
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLILV 95 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~ 95 (299)
.+|.++.+|-+|.-. .-+.+.+.+..+.+......+++|--++-|.-+...+..+-+ .+.++|+-
T Consensus 181 ~~~DvViIDTaGr~~------------~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHK------------QEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCc------------chHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 589999999999621 234456667777666666678888888877777777766643 36677764
No 270
>PRK14974 cell division protein FtsY; Provisional
Probab=55.28 E-value=66 Score=27.09 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=45.6
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEE
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLIL 94 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 94 (299)
...++.++.+|-.|... +-..+.+.+..+.+....+.+++|.-+.-|.-++.-+..+.+ .+.++|+
T Consensus 219 ~~~~~DvVLIDTaGr~~------------~~~~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIl 286 (336)
T PRK14974 219 KARGIDVVLIDTAGRMH------------TDANLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVIL 286 (336)
T ss_pred HhCCCCEEEEECCCccC------------CcHHHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEE
Confidence 34689999999998742 233455666777776666777888877777777766655532 4667776
Q ss_pred e
Q 044899 95 V 95 (299)
Q Consensus 95 ~ 95 (299)
.
T Consensus 287 T 287 (336)
T PRK14974 287 T 287 (336)
T ss_pred e
Confidence 5
No 271
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=54.82 E-value=52 Score=24.18 Aligned_cols=66 Identities=15% Similarity=0.151 Sum_probs=37.4
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEec
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVS 96 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 96 (299)
+..+-.+|++|-+|- ..+-.++++.+....+.-..+-+.++|-+.|=--.+. ++.+-.+.++
T Consensus 64 l~~~~~~i~LDe~Gk------------~~sS~~fA~~l~~~~~~g~~~i~F~IGGa~G~~~~v~------~~a~~~lSLS 125 (157)
T PRK00103 64 LPKGARVIALDERGK------------QLSSEEFAQELERWRDDGRSDVAFVIGGADGLSPAVK------KRADQSLSLS 125 (157)
T ss_pred CCCCCEEEEEcCCCC------------cCCHHHHHHHHHHHHhcCCccEEEEEcCccccCHHHH------HhcCceEEec
Confidence 344556899998886 2456667777766533322244678887776332221 2334445566
Q ss_pred cCCC
Q 044899 97 PICK 100 (299)
Q Consensus 97 ~~~~ 100 (299)
+...
T Consensus 126 ~mTf 129 (157)
T PRK00103 126 KLTL 129 (157)
T ss_pred cCCC
Confidence 5544
No 272
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=54.48 E-value=20 Score=28.93 Aligned_cols=34 Identities=24% Similarity=0.247 Sum_probs=24.2
Q ss_pred HHHHHHHhCCC-cEEEEeeChhHHHHHHHHHhhhh
Q 044899 54 VAEVLDFFGLE-KVLCLGVTAGAYILTLFAMKYQE 87 (299)
Q Consensus 54 l~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~ 87 (299)
+.+.+...++. .=.++|.|.||.++..++....+
T Consensus 16 vl~al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 16 VLDAFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33334444555 34899999999999999887644
No 273
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=51.38 E-value=24 Score=27.89 Aligned_cols=32 Identities=22% Similarity=0.122 Sum_probs=23.3
Q ss_pred HHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhh
Q 044899 54 VAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 54 l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+.+...++. .-.++|-|.|+.++..++...
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~ 50 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGL 50 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCC
Confidence 34444445665 347999999999999998764
No 274
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=51.08 E-value=25 Score=28.93 Aligned_cols=31 Identities=23% Similarity=0.187 Sum_probs=23.8
Q ss_pred HHhCCCcEEEEeeChhHHHHHHHHHhhhhhh
Q 044899 59 DFFGLEKVLCLGVTAGAYILTLFAMKYQERV 89 (299)
Q Consensus 59 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 89 (299)
...++.+-++.|.|.|+.+|..++....+.+
T Consensus 92 ~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 92 WEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3346666789999999999999998654444
No 275
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=47.98 E-value=2e+02 Score=25.62 Aligned_cols=49 Identities=18% Similarity=0.486 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 49 DLAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
.+.+-|.+.++.||.+ .++|-|-|||..-|+.++++.. -.++|+--|..
T Consensus 340 ~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~ 390 (511)
T TIGR03712 340 GIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLV 390 (511)
T ss_pred HHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCccc
Confidence 4556677778888875 7999999999999999998762 33555555543
No 276
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.27 E-value=42 Score=27.92 Aligned_cols=19 Identities=11% Similarity=0.134 Sum_probs=16.4
Q ss_pred EEEeeChhHHHHHHHHHhh
Q 044899 67 LCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+.|.|+||.+|+.++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 5889999999999998643
No 277
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=45.66 E-value=36 Score=27.10 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=17.4
Q ss_pred EEEeeChhHHHHHHHHHhh
Q 044899 67 LCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~~ 85 (299)
.++|-|.|+.++..++...
T Consensus 34 ~i~GtSAGAl~aa~~a~g~ 52 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGV 52 (243)
T ss_pred EEEEEcHHHHHHHHHHhCC
Confidence 8999999999999999765
No 278
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=44.38 E-value=1.5e+02 Score=26.09 Aligned_cols=66 Identities=17% Similarity=0.246 Sum_probs=41.0
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEEe
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLILV 95 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~ 95 (299)
.++|.++.+|-+|.... -+.+.+.+..+.+.+..+.+++|--++-|.-+...|..+-+ .+.++|+-
T Consensus 180 ~~~~DvVIIDTaGr~~~------------d~~l~~eL~~i~~~~~p~e~lLVvda~tgq~~~~~a~~f~~~v~i~giIlT 247 (428)
T TIGR00959 180 ENGFDVVIVDTAGRLQI------------DEELMEELAAIKEILNPDEILLVVDAMTGQDAVNTAKTFNERLGLTGVVLT 247 (428)
T ss_pred hcCCCEEEEeCCCcccc------------CHHHHHHHHHHHHhhCCceEEEEEeccchHHHHHHHHHHHhhCCCCEEEEe
Confidence 56899999999997422 12345555555555555566666666666666666655532 35566654
No 279
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=42.99 E-value=1.6e+02 Score=23.95 Aligned_cols=68 Identities=18% Similarity=0.184 Sum_probs=38.6
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC------CCcEEEEeeChhHHHHHHHHHhhhh--h
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG------LEKVLCLGVTAGAYILTLFAMKYQE--R 88 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~~~p~--~ 88 (299)
..++|.++.+|-+|.... -..+.+.+..+.+... ...+++|--+..|.-++..+..+-+ .
T Consensus 151 ~~~~~D~ViIDT~G~~~~------------d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~~~~~~~~~~~f~~~~~ 218 (272)
T TIGR00064 151 KARNIDVVLIDTAGRLQN------------KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATTGQNALEQAKVFNEAVG 218 (272)
T ss_pred HHCCCCEEEEeCCCCCcc------------hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCCCHHHHHHHHHHHhhCC
Confidence 457899999999998532 2333445555544433 3455555555455545554544322 3
Q ss_pred hcceEEec
Q 044899 89 VLGLILVS 96 (299)
Q Consensus 89 v~~lvl~~ 96 (299)
+.++|+.-
T Consensus 219 ~~g~IlTK 226 (272)
T TIGR00064 219 LTGIILTK 226 (272)
T ss_pred CCEEEEEc
Confidence 56666654
No 280
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=42.54 E-value=56 Score=26.59 Aligned_cols=39 Identities=15% Similarity=0.305 Sum_probs=25.4
Q ss_pred CHHHHHHHHHH-HHHHhC-CCcEEEEeeChhHHHHHHHHHh
Q 044899 46 NVDDLAEQVAE-VLDFFG-LEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 46 ~~~~~~~dl~~-~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.+++-+.+... +.+... .+++.++|.|-||.+|-.+|..
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 44444443333 334443 3579999999999999888854
No 281
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=41.38 E-value=34 Score=27.30 Aligned_cols=17 Identities=18% Similarity=0.366 Sum_probs=15.6
Q ss_pred EEEeeChhHHHHHHHHH
Q 044899 67 LCLGVTAGAYILTLFAM 83 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~ 83 (299)
.+.|.|.|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 79999999999999984
No 282
>PRK12467 peptide synthase; Provisional
Probab=41.16 E-value=1.1e+02 Score=35.67 Aligned_cols=82 Identities=16% Similarity=0.018 Sum_probs=54.7
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-CCcEEEEeeChhHHHHHHHHHhh--
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFG-LEKVLCLGVTAGAYILTLFAMKY-- 85 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~-- 85 (299)
.+..+...+..+..++.+..++.-... ....+++.++....+.+.... ..+..+.|+|+||.++..++...
T Consensus 3707 ~~~~l~~~l~~~~~~~~l~~~~~~~d~------~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~~~~l~~ 3780 (3956)
T PRK12467 3707 DYEPLAVILEGDRHVLGLTCRHLLDDG------WQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLVAELLER 3780 (3956)
T ss_pred hhHHHHHHhCCCCcEEEEecccccccc------CCccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHHHHHHHH
Confidence 444455566677888888887753221 223567777777777666554 34789999999999999988653
Q ss_pred -hhhhcceEEec
Q 044899 86 -QERVLGLILVS 96 (299)
Q Consensus 86 -p~~v~~lvl~~ 96 (299)
.+.+.-+.+++
T Consensus 3781 ~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3781 EGESEAFLGLFD 3792 (3956)
T ss_pred cCCceeEEEEEe
Confidence 34455555554
No 283
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=40.91 E-value=51 Score=24.03 Aligned_cols=25 Identities=24% Similarity=0.301 Sum_probs=19.0
Q ss_pred HHHhCC--CcEEEEeeChhHHHHHHHH
Q 044899 58 LDFFGL--EKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 58 l~~l~~--~~~~lvGhS~Gg~ia~~~a 82 (299)
++..+. ..-++.|.|.|+.++..++
T Consensus 20 l~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 20 LAERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 343444 4457889999999999988
No 284
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=40.60 E-value=62 Score=17.57 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=22.2
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEE
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCL 69 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lv 69 (299)
..+|..+|+-||+. .++|..+++.+..+.++++
T Consensus 6 ~a~v~~~~fSgHad-----------------~~~L~~~i~~~~p~~vilV 38 (43)
T PF07521_consen 6 RARVEQIDFSGHAD-----------------REELLEFIEQLNPRKVILV 38 (43)
T ss_dssp -SEEEESGCSSS-B-----------------HHHHHHHHHHHCSSEEEEE
T ss_pred EEEEEEEeecCCCC-----------------HHHHHHHHHhcCCCEEEEe
Confidence 34677788877741 4778888888876666654
No 285
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=40.10 E-value=92 Score=19.37 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=19.9
Q ss_pred cEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
+++++| ||.+++++|....+.=..+.++.....
T Consensus 1 ~vvViG---gG~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIG---GGFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEEES---SSHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred CEEEEC---cCHHHHHHHHHHHHhCcEEEEEeccch
Confidence 366777 555666666655554456677665443
No 286
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=40.05 E-value=16 Score=29.35 Aligned_cols=17 Identities=12% Similarity=0.358 Sum_probs=13.2
Q ss_pred CCcEEEEeeChhHHHHH
Q 044899 63 LEKVLCLGVTAGAYILT 79 (299)
Q Consensus 63 ~~~~~lvGhS~Gg~ia~ 79 (299)
+..|+++|||+|..=..
T Consensus 234 i~~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 234 IDEIIIYGHSLGEVDYP 250 (270)
T ss_pred CCEEEEEeCCCchhhHH
Confidence 46899999999975433
No 287
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=39.64 E-value=1.7e+02 Score=23.81 Aligned_cols=65 Identities=11% Similarity=0.195 Sum_probs=41.5
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEE-EeeChhHHHHHHHHHhhh-hhhcceEEe
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLC-LGVTAGAYILTLFAMKYQ-ERVLGLILV 95 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~l-vGhS~Gg~ia~~~a~~~p-~~v~~lvl~ 95 (299)
.++.++.+|-+|.... -....+.+.++++......++| +.-++++.-+...+..+. -.++++|+.
T Consensus 153 ~~~D~ViIDt~Gr~~~------------~~~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 153 ARVDYILIDTAGKNYR------------ASETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred CCCCEEEEECCCCCcC------------CHHHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 3799999999998421 1334455556666555445555 445678877777777653 346666664
No 288
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=39.47 E-value=85 Score=19.85 Aligned_cols=24 Identities=29% Similarity=0.506 Sum_probs=18.4
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhh
Q 044899 62 GLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 62 ~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+.+++.++|-|-|=.+|.+.+..+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 446899999999999988887765
No 289
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=39.36 E-value=45 Score=26.57 Aligned_cols=19 Identities=21% Similarity=0.190 Sum_probs=16.7
Q ss_pred EEEeeChhHHHHHHHHHhh
Q 044899 67 LCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+.|-|.|+.+|..++...
T Consensus 33 ~i~GtSAGAl~aa~~a~g~ 51 (245)
T cd07218 33 KISGASAGALAACCLLCDL 51 (245)
T ss_pred eEEEEcHHHHHHHHHHhCC
Confidence 4999999999999998754
No 290
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=39.16 E-value=53 Score=24.19 Aligned_cols=45 Identities=13% Similarity=0.098 Sum_probs=23.9
Q ss_pred HHHHHHHHh--CCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEecc
Q 044899 53 QVAEVLDFF--GLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSP 97 (299)
Q Consensus 53 dl~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 97 (299)
.+.++++.+ ...+++++|-|..|..-+.++...++.+..++=.+|
T Consensus 56 ~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 56 ELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 344444433 335799999999999988888766666766665554
No 291
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=38.31 E-value=40 Score=28.01 Aligned_cols=22 Identities=23% Similarity=0.264 Sum_probs=18.5
Q ss_pred CCCcEEEEeeChhHHHHHHHHH
Q 044899 62 GLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 62 ~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
+..+..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999998887764
No 292
>PRK04148 hypothetical protein; Provisional
Probab=37.50 E-value=60 Score=23.12 Aligned_cols=45 Identities=18% Similarity=0.133 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEecc
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSP 97 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 97 (299)
++++.+.+.+......++..+|-..|..+|..++... .-++.++-
T Consensus 3 ~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~G----~~ViaIDi 47 (134)
T PRK04148 3 TIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKESG----FDVIVIDI 47 (134)
T ss_pred HHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHCC----CEEEEEEC
Confidence 3444444433333335799999998888888877432 24566654
No 293
>PF15566 Imm18: Immunity protein 18
Probab=37.05 E-value=47 Score=19.12 Aligned_cols=31 Identities=10% Similarity=0.051 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEeeChhHHH
Q 044899 47 VDDLAEQVAEVLDFFGLEKVLCLGVTAGAYI 77 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~i 77 (299)
+..++++|..+......+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 5667788888888776778999999999953
No 294
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=36.97 E-value=44 Score=27.66 Aligned_cols=52 Identities=21% Similarity=0.288 Sum_probs=31.4
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---cE-EEEeeChhHHHHHHHHH
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE---KV-LCLGVTAGAYILTLFAM 83 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~---~~-~lvGhS~Gg~ia~~~a~ 83 (299)
.++++|+++|==|. .+.. .+.-|.++.+.++.. .+ .+.|.|.||.+|+.++.
T Consensus 5 ~~~~riLsLdGGGi----------rG~~----~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 5 GRGIRILSIDGGGT----------RGVV----ALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCCcEEEEECCChH----------HHHH----HHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 45888998885332 0011 133344444444432 12 48899999999999875
No 295
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=36.97 E-value=50 Score=18.30 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=25.1
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDF 60 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~ 60 (299)
..+|.+..+|+||.- + ...|+++..+.+.+.+..
T Consensus 11 ~~~y~~~~pdlpg~~-t--------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCF-T--------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSSEEEEETTCCTCE-E--------EESSHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCccChh-h--------cCCCHHHHHHHHHHHHHH
Confidence 458999999999974 1 135788888877776653
No 296
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=35.90 E-value=55 Score=26.25 Aligned_cols=22 Identities=23% Similarity=0.294 Sum_probs=18.2
Q ss_pred cEEEEeeChhHHHHHHHHHhhh
Q 044899 65 KVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
.-.++|.|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999987553
No 297
>PLN03093 Protein SENSITIVITY TO RED LIGHT REDUCED 1; Provisional
Probab=35.86 E-value=91 Score=25.19 Aligned_cols=74 Identities=11% Similarity=0.123 Sum_probs=33.8
Q ss_pred ccccccCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHhCCCcEEEEeeChhHHHH
Q 044899 4 FQGLFFCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVA-EVLDFFGLEKVLCLGVTAGAYIL 78 (299)
Q Consensus 4 ~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~-~~l~~l~~~~~~lvGhS~Gg~ia 78 (299)
|.+.|.-.+..-+-.-|+.|+..+--|.-....+.-. .-...-..+.+.+. .-...-.+.+++++|+|++.+.-
T Consensus 138 YDPVFs~~e~~~Le~LG~~Vls~neegkr~a~~pTLF-YMPHCp~~LyeNLL~aNWs~e~L~~ivliGNSFe~y~~ 212 (273)
T PLN03093 138 FDPVLSATESRVLESLGCSVLSVNEQGRREATKPTLF-FMPHCEAELYNNLLQANWRMERLNHIALFGNSFEMYEE 212 (273)
T ss_pred ECCCCCHHHHHHHHHcCCeeccccccccccCCCCeEE-EeCCCCHHHHHHHHHHhCCHHHcCCEEEEeCCHHHHHH
Confidence 4444553332222234778888776654332211000 00111122333222 21112234589999999996553
No 298
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=35.64 E-value=2.4e+02 Score=26.03 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=27.6
Q ss_pred EEEEeeChhHHHHHHHHHhh-hhhhcceEEeccCCC
Q 044899 66 VLCLGVTAGAYILTLFAMKY-QERVLGLILVSPICK 100 (299)
Q Consensus 66 ~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~ 100 (299)
|+--+.|=||..++..|.+. ...|++++...|...
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~v~ 322 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPNVN 322 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCccC
Confidence 56667899999999988765 457999999887654
No 299
>COG3621 Patatin [General function prediction only]
Probab=35.46 E-value=92 Score=26.06 Aligned_cols=55 Identities=13% Similarity=0.163 Sum_probs=35.7
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC----cEE-EEeeChhHHHHHHHHHhh
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLE----KVL-CLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~----~~~-lvGhS~Gg~ia~~~a~~~ 85 (299)
.+...|++..+|--|.- + .+...+...+++.... .+. +-|.|.||.+++.+|...
T Consensus 4 ~~msk~rIlsldGGGvr----------G-----~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~k 63 (394)
T COG3621 4 HLMSKYRILSLDGGGVR----------G-----AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGK 63 (394)
T ss_pred ccccceeEEEecCCccc----------c-----HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCC
Confidence 34456888888854431 1 4455666666664433 333 568999999999998743
No 300
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=34.77 E-value=1.4e+02 Score=24.84 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=53.3
Q ss_pred cCHhhHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHH--HHHHHHHHHhCCCcE------EEEeeCh-------
Q 044899 9 FCPDAASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLA--EQVAEVLDFFGLEKV------LCLGVTA------- 73 (299)
Q Consensus 9 ~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~--~dl~~~l~~l~~~~~------~lvGhS~------- 73 (299)
....+..++..||.|+.+|-.-.|....-.... ..+-..|+. +-|.++++...++-| ..||-|+
T Consensus 13 GSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy 91 (329)
T COG1087 13 GSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYY 91 (329)
T ss_pred HHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHH
Confidence 334467788999999999998887554321110 111122222 356667777666643 3677775
Q ss_pred ----hHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 74 ----GAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 74 ----Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
+|.+.+.=+++. ..|+.+|+.+++.
T Consensus 92 ~NNv~gTl~Ll~am~~-~gv~~~vFSStAa 120 (329)
T COG1087 92 DNNVVGTLNLIEAMLQ-TGVKKFIFSSTAA 120 (329)
T ss_pred hhchHhHHHHHHHHHH-hCCCEEEEecchh
Confidence 455555444443 3499999998644
No 301
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=34.71 E-value=56 Score=26.15 Aligned_cols=20 Identities=25% Similarity=0.222 Sum_probs=17.3
Q ss_pred EEEEeeChhHHHHHHHHHhh
Q 044899 66 VLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 66 ~~lvGhS~Gg~ia~~~a~~~ 85 (299)
-.+.|-|.|+.++..++...
T Consensus 38 ~~i~G~SAGAl~aa~~a~g~ 57 (249)
T cd07220 38 RKIYGASAGALTATALVTGV 57 (249)
T ss_pred CeEEEEcHHHHHHHHHHcCC
Confidence 46899999999999998764
No 302
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=34.40 E-value=53 Score=22.73 Aligned_cols=31 Identities=13% Similarity=0.330 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILT 79 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 79 (299)
+....+.-.+..++.+.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 4567777778899999999999976555443
No 303
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=33.86 E-value=62 Score=28.04 Aligned_cols=63 Identities=10% Similarity=0.154 Sum_probs=35.6
Q ss_pred CcceEEEecCCCCCCchhHHH-HHhhCCCcee--EEEEcCCCCcc---cccChHhHHHHHHHHHhhcCC
Q 044899 187 QCKTLIFVGESSPFHTESLHM-SATMGSKNCG--LVEVQACGSLV---TEEYPLAMLIPIELFLMGFGY 249 (299)
Q Consensus 187 ~~Pvl~i~G~~D~~~~~~~~~-~~~~~~~~~~--~~~~~~~gH~~---~~e~p~~~~~~i~~fl~~~~~ 249 (299)
+.|++++.|.-|.+-+....+ .+.+...+.. .+.+||.|+.. .-++.+.+.+.|.+||...+.
T Consensus 189 p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~ 257 (411)
T PF06500_consen 189 PYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPW 257 (411)
T ss_dssp -EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTT
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCc
Confidence 579999999999987543333 3333222433 44567877743 334556788999999987653
No 304
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=33.75 E-value=1.8e+02 Score=25.50 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=28.2
Q ss_pred HHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccC
Q 044899 53 QVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPI 98 (299)
Q Consensus 53 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 98 (299)
.+.+.+.....++++++| ||.+++++|...-..=..+.++...
T Consensus 138 ~l~~~l~~~~~~~vvViG---gG~ig~E~A~~l~~~g~~Vtli~~~ 180 (438)
T PRK13512 138 AIDQFIKANQVDKALVVG---AGYISLEVLENLYERGLHPTLIHRS 180 (438)
T ss_pred HHHHHHhhcCCCEEEEEC---CCHHHHHHHHHHHhCCCcEEEEecc
Confidence 344444444457899999 7888888887665444467777653
No 305
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=33.31 E-value=2.1e+02 Score=22.91 Aligned_cols=54 Identities=11% Similarity=0.113 Sum_probs=31.8
Q ss_pred EEEecCCCCCC--chhHHHHHhhCCCceeEEEEcCCCCcccccChHhHHHHHHHHHhhcCC
Q 044899 191 LIFVGESSPFH--TESLHMSATMGSKNCGLVEVQACGSLVTEEYPLAMLIPIELFLMGFGY 249 (299)
Q Consensus 191 l~i~G~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~~ 249 (299)
++|-|..|... .-.+++.+.....+.++.++|-++. .|++..+...+.+++++.
T Consensus 2 ~~iGG~~~~~~~~~i~~~~~~lag~~~~rI~~iptAS~-----~~~~~~~~~~~~~~~lG~ 57 (250)
T TIGR02069 2 VIIGGAEDKVGDREILREFVSRAGGEDAIIVIITSASE-----EPREVGERYITIFSRLGV 57 (250)
T ss_pred eEEeCccccCChHHHHHHHHHHhCCCCceEEEEeCCCC-----ChHHHHHHHHHHHHHcCC
Confidence 45666666644 2233444444544678888887653 455566666666666654
No 306
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=33.29 E-value=1.9e+02 Score=21.07 Aligned_cols=57 Identities=23% Similarity=0.330 Sum_probs=37.9
Q ss_pred hh-cCc-EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeC-hhHHHHHHHHHhh
Q 044899 17 LL-HNF-CIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVT-AGAYILTLFAMKY 85 (299)
Q Consensus 17 l~-~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS-~Gg~ia~~~a~~~ 85 (299)
+. .|. +|+.++.+... .++.+.+++.+.++++..+.+ ++++|++ .|.-++-.+|.+.
T Consensus 54 l~~~G~d~v~~~~~~~~~-----------~~~~~~~a~~l~~~~~~~~~~-lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 54 LAKYGADKVYHIDDPALA-----------EYDPEAYADALAELIKEEGPD-LVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHSTTESEEEEEE-GGGT-----------TC-HHHHHHHHHHHHHHHT-S-EEEEESSHHHHHHHHHHHHHH
T ss_pred hhhcCCcEEEEecCcccc-----------ccCHHHHHHHHHHHHHhcCCC-EEEEcCcCCCCcHHHHHHHHh
Confidence 44 465 57777755442 367888999999999997754 7777865 5666666666654
No 307
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=33.23 E-value=87 Score=25.91 Aligned_cols=34 Identities=12% Similarity=0.151 Sum_probs=27.2
Q ss_pred HHHHHHHHHHhCC----CcEEEEeeC--hhHHHHHHHHHh
Q 044899 51 AEQVAEVLDFFGL----EKVLCLGVT--AGAYILTLFAMK 84 (299)
Q Consensus 51 ~~dl~~~l~~l~~----~~~~lvGhS--~Gg~ia~~~a~~ 84 (299)
...+.+++++.++ +++.++|.| ||..++..+..+
T Consensus 143 p~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ 182 (301)
T PRK14194 143 PSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQA 182 (301)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHC
Confidence 5667788887764 489999997 999999988754
No 308
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=32.95 E-value=1.1e+02 Score=22.42 Aligned_cols=61 Identities=15% Similarity=0.097 Sum_probs=34.8
Q ss_pred cEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 21 FCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 21 ~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
-.||++|-+|- ..+-.++++.+..+.+. +.+-+.++|-+.|=.-.+. ++.+..+.++....
T Consensus 66 ~~~i~LDe~Gk------------~~sS~~fA~~l~~~~~~-g~~i~FvIGGa~G~~~~v~------~~a~~~lSLS~mTf 126 (153)
T TIGR00246 66 AHVVTLDIPGK------------PWTTPQLADTLEKWKTD-GRDVTLLIGGPEGLSPTCK------AAAEQSWSLSKLTL 126 (153)
T ss_pred CeEEEEcCCCC------------cCCHHHHHHHHHHHhcc-CCeEEEEEcCCCcCCHHHH------HhcCceEEeecCCC
Confidence 46888888876 24566667777666433 3234568887766433322 23344555555443
No 309
>PRK10867 signal recognition particle protein; Provisional
Probab=32.62 E-value=3.1e+02 Score=24.23 Aligned_cols=65 Identities=14% Similarity=0.181 Sum_probs=38.0
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhh--hcceEE
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQER--VLGLIL 94 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl 94 (299)
..+|.++.+|-+|.... -+.+.+.+..+.+......+++|.-++-|.-+...+..+-+. +.++|+
T Consensus 181 ~~~~DvVIIDTaGrl~~------------d~~lm~eL~~i~~~v~p~evllVlda~~gq~av~~a~~F~~~~~i~giIl 247 (433)
T PRK10867 181 ENGYDVVIVDTAGRLHI------------DEELMDELKAIKAAVNPDEILLVVDAMTGQDAVNTAKAFNEALGLTGVIL 247 (433)
T ss_pred hcCCCEEEEeCCCCccc------------CHHHHHHHHHHHHhhCCCeEEEEEecccHHHHHHHHHHHHhhCCCCEEEE
Confidence 35899999999997422 123344455555555555566666565555566666554332 455555
No 310
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=32.39 E-value=87 Score=29.61 Aligned_cols=36 Identities=19% Similarity=0.215 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHH---HhCCCcEEEEeeChhHHHHHHHHH
Q 044899 48 DDLAEQVAEVLD---FFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 48 ~~~~~dl~~~l~---~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.....++...++ ..++.-=++.|.|+||.++..+|.
T Consensus 47 ~~~Y~~l~~~l~~~~~~~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 47 EAVYGALLELLGAHLRLRVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred hhHHHHHHHHhhhhhccCCCCceEEeeCHHHHHHHHHHc
Confidence 334444555554 334444579999999999999886
No 311
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=32.38 E-value=1.3e+02 Score=27.42 Aligned_cols=51 Identities=10% Similarity=0.167 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEee------ChhHHHHHHHHHhhhhhhcceEEeccCCC
Q 044899 47 VDDLAEQVAEVLDFFGLEKVLCLGV------TAGAYILTLFAMKYQERVLGLILVSPICK 100 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 100 (299)
...+...+.+.+.. .++|+++|| +.|+.+++..-+..-.+ .+-++++|.-.
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~~ 379 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPEDM 379 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcccc
Confidence 33444555555555 579999999 78999998876654343 66777776543
No 312
>PRK10416 signal recognition particle-docking protein FtsY; Provisional
Probab=31.78 E-value=2.6e+02 Score=23.35 Aligned_cols=73 Identities=15% Similarity=0.144 Sum_probs=39.5
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCcEEEEeeChhHHHHHHHHHhhhh--hh
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF---GLEKVLCLGVTAGAYILTLFAMKYQE--RV 89 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v 89 (299)
....++|.++.+|-+|..... ..-+++ ...+..+++.+ ....+++|-.+..|.-++.-+..+-+ .+
T Consensus 191 ~~~~~~~D~ViIDTaGr~~~~--------~~l~~e-L~~~~~v~~~~~~~~p~~~~LVl~a~~g~~~~~~a~~f~~~~~~ 261 (318)
T PRK10416 191 AAKARGIDVLIIDTAGRLHNK--------TNLMEE-LKKIKRVIKKADPDAPHEVLLVLDATTGQNALSQAKAFHEAVGL 261 (318)
T ss_pred HHHhCCCCEEEEeCCCCCcCC--------HHHHHH-HHHHHHHHhhhcCCCCceEEEEEECCCChHHHHHHHHHHhhCCC
Confidence 345679999999999985321 011222 22333333321 22346677777667766665555422 25
Q ss_pred cceEEec
Q 044899 90 LGLILVS 96 (299)
Q Consensus 90 ~~lvl~~ 96 (299)
.++|+--
T Consensus 262 ~giIlTK 268 (318)
T PRK10416 262 TGIILTK 268 (318)
T ss_pred CEEEEEC
Confidence 5666543
No 313
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=31.59 E-value=71 Score=18.10 Aligned_cols=27 Identities=4% Similarity=0.142 Sum_probs=24.1
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEe
Q 044899 44 LLNVDDLAEQVAEVLDFFGLEKVLCLG 70 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~~~~~lvG 70 (299)
.++.+.+..|+...|..+.+..+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 477888999999999999998998888
No 314
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.65 E-value=1.7e+02 Score=26.06 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=42.2
Q ss_pred hhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 17 LLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 17 l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
-.+||.|+.+|-.|.-.. -..+...+..+++.-..+.++.||.-+=|.=++.-+.++
T Consensus 463 ~~~gfDVvLiDTAGR~~~------------~~~lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~f 519 (587)
T KOG0781|consen 463 RNQGFDVVLIDTAGRMHN------------NAPLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKF 519 (587)
T ss_pred HhcCCCEEEEeccccccC------------ChhHHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHH
Confidence 346999999999887422 334567788888888888899999888777776655543
No 315
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=30.38 E-value=57 Score=27.48 Aligned_cols=17 Identities=35% Similarity=0.780 Sum_probs=14.1
Q ss_pred EEEeeChhHHHHHHHHH
Q 044899 67 LCLGVTAGAYILTLFAM 83 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~ 83 (299)
.++|||+|=+.|+.++.
T Consensus 127 ~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 127 VCAGLSLGEYTALVFAG 143 (343)
T ss_pred eeeeccHHHHHHHHHhC
Confidence 57999999988887763
No 316
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=30.12 E-value=57 Score=35.78 Aligned_cols=29 Identities=14% Similarity=0.102 Sum_probs=23.5
Q ss_pred HHHHHHHhCCCcEEEEeeChhHHHHHHHH
Q 044899 54 VAEVLDFFGLEKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 54 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 82 (299)
+..++..+|+++-.++|||+|=+.|+..+
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 34556778999999999999998887766
No 317
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.80 E-value=80 Score=22.66 Aligned_cols=30 Identities=10% Similarity=0.218 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYIL 78 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia 78 (299)
+....+.-.+..++.+.++++||+-=|++.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 456677777889999999999998544443
No 318
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=29.48 E-value=71 Score=28.43 Aligned_cols=53 Identities=21% Similarity=0.323 Sum_probs=34.1
Q ss_pred hcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcE-----EEEeeChhHHHHHHHHHhh
Q 044899 18 LHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKV-----LCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 18 ~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~-----~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+|.+|+.+|--|.- +.. +-.+..-++.+..+++ .+.|.|.||++|..+..++
T Consensus 414 g~G~rILSiDGGGtr----------G~~-----~lqiL~kieklsgKpIheLFD~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 414 GQGLRILSIDGGGTR----------GLA-----TLQILKKIEKLSGKPIHELFDLICGVSTGGILAIALGVKL 471 (763)
T ss_pred CCceEEEEecCCCcc----------chh-----HHHHHHHHHHhcCCcHHHHHHHHhccCchHHHHHHHHhcC
Confidence 458888888854431 111 2233344555555665 3899999999999987754
No 319
>cd01715 ETF_alpha The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin.
Probab=29.06 E-value=1.8e+02 Score=21.47 Aligned_cols=41 Identities=15% Similarity=0.052 Sum_probs=30.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEeeC-hhHHHHHHHHHhh
Q 044899 44 LLNVDDLAEQVAEVLDFFGLEKVLCLGVT-AGAYILTLFAMKY 85 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~~~~~lvGhS-~Gg~ia~~~a~~~ 85 (299)
.++.+.+++.+.++++..+ -.++|+|+| .|.-++-++|.+.
T Consensus 65 ~~~~~~~a~al~~~i~~~~-p~~Vl~~~t~~g~~la~rlAa~L 106 (168)
T cd01715 65 HYLAEPYAPALVALAKKEK-PSHILAGATSFGKDLAPRVAAKL 106 (168)
T ss_pred ccChHHHHHHHHHHHHhcC-CCEEEECCCccccchHHHHHHHh
Confidence 3678888999999998876 357777754 5667777777664
No 320
>KOG2316 consensus Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=28.55 E-value=89 Score=24.38 Aligned_cols=66 Identities=12% Similarity=-0.027 Sum_probs=40.0
Q ss_pred hHhhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHH
Q 044899 13 AASLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTL 80 (299)
Q Consensus 13 ~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~ 80 (299)
+++++++-.++=.+-.+=.|+|... .-....+-+|-++|+.+++....-+-.-+=|.|.|+.++-.
T Consensus 55 ~i~lyaecm~lPlyrr~i~g~s~nq--~l~Y~~t~~DEvEDLy~ll~~VK~~~p~~eaVS~GAIlS~Y 120 (277)
T KOG2316|consen 55 VIDLYAECMGLPLYRRRIRGRSINQ--KLQYTKTEGDEVEDLYELLKTVKEKIPDVEAVSVGAILSDY 120 (277)
T ss_pred HHHHHHHHhcCceeeeeccCccccc--ccccccCCCchHHHHHHHHHHHHhhCCCceeeehhhhHhHH
Confidence 3445554333333333334555432 11334566778899999998887554578899999977643
No 321
>COG0218 Predicted GTPase [General function prediction only]
Probab=27.96 E-value=97 Score=23.82 Aligned_cols=17 Identities=12% Similarity=0.323 Sum_probs=14.5
Q ss_pred cCCcceEEEecCCCCCC
Q 044899 185 ELQCKTLIFVGESSPFH 201 (299)
Q Consensus 185 ~i~~Pvl~i~G~~D~~~ 201 (299)
....|++++.-.-|.+-
T Consensus 133 ~~~i~~~vv~tK~DKi~ 149 (200)
T COG0218 133 ELGIPVIVVLTKADKLK 149 (200)
T ss_pred HcCCCeEEEEEccccCC
Confidence 45789999999999887
No 322
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=27.81 E-value=65 Score=23.80 Aligned_cols=21 Identities=29% Similarity=0.303 Sum_probs=16.8
Q ss_pred CcEEEEeeChhHHHHHHHHHh
Q 044899 64 EKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 64 ~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
..-.+.|.|.||.+|+.++..
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC
T ss_pred CccEEEEcChhhhhHHHHHhC
Confidence 345799999999999888765
No 323
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.61 E-value=54 Score=27.70 Aligned_cols=18 Identities=22% Similarity=0.377 Sum_probs=15.8
Q ss_pred EEEeeChhHHHHHHHHHh
Q 044899 67 LCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~ 84 (299)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 588999999999999853
No 324
>cd01985 ETF The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The alpha subunit of ETF is structurally related to the bacterial nitrogen fixation protein fixB which could play a role in a redox process and feed electrons to ferredoxin. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=27.53 E-value=2.2e+02 Score=21.25 Aligned_cols=41 Identities=12% Similarity=0.120 Sum_probs=30.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEee-ChhHHHHHHHHHhh
Q 044899 44 LLNVDDLAEQVAEVLDFFGLEKVLCLGV-TAGAYILTLFAMKY 85 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~~~~~lvGh-S~Gg~ia~~~a~~~ 85 (299)
.++.+.+++.+.++++..+ -.++|+|+ +.|+.++-++|.+.
T Consensus 73 ~~~~~~~a~~l~~~i~~~~-p~~Vl~g~t~~g~~la~rlA~~L 114 (181)
T cd01985 73 GYDPEATAKALAALIKKEK-PDLILAGATSIGKQLAPRVAALL 114 (181)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEECCcccccCHHHHHHHHh
Confidence 4678888999999988876 45777775 45667777777664
No 325
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=27.38 E-value=76 Score=27.75 Aligned_cols=40 Identities=8% Similarity=0.150 Sum_probs=23.3
Q ss_pred cceEEEecCCCCCCchhHHHHHhhCCCceeEEEEcCCCCcccc
Q 044899 188 CKTLIFVGESSPFHTESLHMSATMGSKNCGLVEVQACGSLVTE 230 (299)
Q Consensus 188 ~Pvl~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 230 (299)
..+++++|+.|+..... ...... ......+++|++|+.=+
T Consensus 377 tnviFtNG~~DPW~~lg--v~~~~~-~~~~~~~I~g~~Hc~Dl 416 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALG--VTSDSS-DSVPAIVIPGGAHCSDL 416 (434)
T ss_dssp -SEEEEEETT-CCGGGS----S-SS-SSEEEEEETT--TTGGG
T ss_pred CeEEeeCCCCCCccccc--CCCCCC-CCcccEEECCCeeeccc
Confidence 46999999999997433 222222 24667789999996543
No 326
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.04 E-value=57 Score=26.70 Aligned_cols=19 Identities=37% Similarity=0.548 Sum_probs=16.6
Q ss_pred EEEeeChhHHHHHHHHHhh
Q 044899 67 LCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~~ 85 (299)
.++|.|.||.+|+.++..+
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999999998643
No 327
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=26.61 E-value=1.5e+02 Score=24.36 Aligned_cols=50 Identities=22% Similarity=0.419 Sum_probs=32.1
Q ss_pred CHHH-HHHHHHHHHHHhCCC---cEEEEeeChhHHHHHHHHHhhhhhhcceEEec
Q 044899 46 NVDD-LAEQVAEVLDFFGLE---KVLCLGVTAGAYILTLFAMKYQERVLGLILVS 96 (299)
Q Consensus 46 ~~~~-~~~dl~~~l~~l~~~---~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 96 (299)
++++ ...-+..+++.++++ .+-=+|..|||+.. .+|.++..+|.|+.+..
T Consensus 52 tL~eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~~-~aA~~y~v~V~GvTlS~ 105 (283)
T COG2230 52 TLEEAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLAI-YAAEEYGVTVVGVTLSE 105 (283)
T ss_pred ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHHH-HHHHHcCCEEEEeeCCH
Confidence 3443 344566677777765 57778999999654 45666655666665543
No 328
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=26.59 E-value=1.7e+02 Score=21.10 Aligned_cols=35 Identities=14% Similarity=0.209 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 47 VDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
..+....+.-.+..++.+.++++||+-=|++...+
T Consensus 38 ~~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 38 DDSALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp -HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred ccchhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 45666777778889999999999999877766433
No 329
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=26.40 E-value=1.1e+02 Score=20.18 Aligned_cols=42 Identities=10% Similarity=0.218 Sum_probs=23.2
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEee
Q 044899 23 IYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGV 71 (299)
Q Consensus 23 vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGh 71 (299)
.++++++|. | |..+..++.++--+.....+..+. ++.+++|.
T Consensus 31 Ffl~eYrGv--s----Pd~wkgf~~~EDpE~aik~i~D~s-~~AVlI~t 72 (110)
T COG4075 31 FFLHEYRGV--S----PDKWKGFSKEEDPESAIKAIRDLS-DKAVLIGT 72 (110)
T ss_pred EEEEEecCc--C----hhHhcCcccccCHHHHHHHHHHhh-hceEEEEE
Confidence 678899997 3 333455666644444444444433 35566654
No 330
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=26.14 E-value=1.8e+02 Score=21.51 Aligned_cols=38 Identities=26% Similarity=0.501 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHhCC----CcEEEEeeC--hhHHHHHHHHHh
Q 044899 47 VDDLAEQVAEVLDFFGL----EKVLCLGVT--AGAYILTLFAMK 84 (299)
Q Consensus 47 ~~~~~~dl~~~l~~l~~----~~~~lvGhS--~Gg~ia~~~a~~ 84 (299)
+.-.+..+.+++++.+. +++.++|.| .|-.+++.+..+
T Consensus 16 ~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 16 VPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp --HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 44456778888888654 489999999 688888877654
No 331
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=25.94 E-value=3.6e+02 Score=22.58 Aligned_cols=41 Identities=17% Similarity=0.288 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHHhCCCcEEEEeeCh-hHHHHHHHHHhh
Q 044899 45 LNVDDLAEQVAEVLDFFGLEKVLCLGVTA-GAYILTLFAMKY 85 (299)
Q Consensus 45 ~~~~~~~~dl~~~l~~l~~~~~~lvGhS~-Gg~ia~~~a~~~ 85 (299)
|+.+.+++.+.++++..+...++|+|++. |--++-++|++.
T Consensus 62 ~~~e~~~~al~~~i~~~~p~~~vl~~~T~~Gr~laprlAa~l 103 (313)
T PRK03363 62 RMIEDYAGVMADTIRQHGADGLVLLPNTRRGKLLAAKLGYRL 103 (313)
T ss_pred cChHHHHHHHHHHHHhhCCCcEEEEcCCccHHHHHHHHHHHh
Confidence 77889999999998886543588888775 555666666654
No 332
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.92 E-value=1e+02 Score=23.22 Aligned_cols=32 Identities=6% Similarity=0.113 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 50 LAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
....+...+..|+.+.++++|||-=|++...+
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~ 98 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAAL 98 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHH
Confidence 45666777788999999999999766665443
No 333
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=25.68 E-value=73 Score=25.75 Aligned_cols=42 Identities=29% Similarity=0.311 Sum_probs=28.6
Q ss_pred HHHHHHHHHhCCCcE-EEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 52 EQVAEVLDFFGLEKV-LCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 52 ~dl~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
.-|.++++.-. .++ .++|.|+|+.-+..+.++.+.+-+++++
T Consensus 28 GVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 28 GVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 33444553322 244 4889999999999999988877655544
No 334
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=25.63 E-value=36 Score=25.50 Aligned_cols=36 Identities=19% Similarity=0.113 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 48 DDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.++-+.+..+++.....-.-.+|-+||++.|+.++.
T Consensus 81 v~Yw~El~~i~dwa~~~v~stl~iCWgaqaal~~~y 116 (175)
T cd03131 81 VDYWEELTEILDWAKTHVTSTLFSCWAAMAALYYFY 116 (175)
T ss_pred cchHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHc
Confidence 345556777777665445678899999999988864
No 335
>PF10913 DUF2706: Protein of unknown function (DUF2706); InterPro: IPR024444 This family of proteins with unknown function appears to be restricted to Rickettsia spp.
Probab=25.43 E-value=1.1e+02 Score=17.37 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=16.6
Q ss_pred CCCCCCccCCccCCccccCc---ccccccccccc
Q 044899 267 SPLNHSCIAPELLSPESLGI---KLKPIKTRADI 297 (299)
Q Consensus 267 ~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~ 297 (299)
-..-++|.+||.=--+++++ -.+|+.+.+++
T Consensus 26 yeikspcvs~didd~s~ls~npcirrpvnsi~ni 59 (60)
T PF10913_consen 26 YEIKSPCVSADIDDNSSLSVNPCIRRPVNSIVNI 59 (60)
T ss_pred ccccCCccccccCCCccccccccccccccccccc
Confidence 34456778887544333332 24566665554
No 336
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=25.27 E-value=1.2e+02 Score=24.31 Aligned_cols=16 Identities=25% Similarity=0.281 Sum_probs=13.7
Q ss_pred cCcEEEEECCCCCCCC
Q 044899 19 HNFCIYHIDASGHELG 34 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S 34 (299)
.|..+..+|.||.+.+
T Consensus 77 ~g~~i~vIDTPGl~~~ 92 (249)
T cd01853 77 DGFKLNIIDTPGLLES 92 (249)
T ss_pred CCeEEEEEECCCcCcc
Confidence 4788999999999865
No 337
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=25.09 E-value=1.2e+02 Score=27.00 Aligned_cols=30 Identities=23% Similarity=0.353 Sum_probs=24.6
Q ss_pred eEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 217 GLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 217 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
.+.++ .+||++..++|+.....+..|+...
T Consensus 462 ~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 462 FLRIY-EAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred EEEEe-cCcceeecCChHHHHHHHHHHHhhc
Confidence 34445 5999999999999999999998753
No 338
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.72 E-value=84 Score=27.92 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=25.5
Q ss_pred CCCcEEEEeeChhHHHHHHHHHhhhhhhcceE
Q 044899 62 GLEKVLCLGVTAGAYILTLFAMKYQERVLGLI 93 (299)
Q Consensus 62 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 93 (299)
++=|=++.|-|+||.+|..++.+.-+.++.+.
T Consensus 200 dLlP~IIsGsS~GaivAsl~~v~~~eEl~~Ll 231 (543)
T KOG2214|consen 200 DLLPNIISGSSAGAIVASLVGVRSNEELKQLL 231 (543)
T ss_pred cccchhhcCCchhHHHHHHHhhcchHHHHHHh
Confidence 44467899999999999999988766666544
No 339
>COG0288 CynT Carbonic anhydrase [Inorganic ion transport and metabolism]
Probab=24.03 E-value=89 Score=24.22 Aligned_cols=35 Identities=9% Similarity=0.216 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHH
Q 044899 48 DDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 48 ~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 82 (299)
......+.-.+..|+.+.++++||+-=|++...+.
T Consensus 76 ~~~l~sleyAv~~L~v~~IiV~GH~~CGav~aa~~ 110 (207)
T COG0288 76 GSVLRSLEYAVYVLGVKEIIVCGHTDCGAVKAALD 110 (207)
T ss_pred cchhHHHHHHHHHcCCCEEEEecCCCcHHHHhccc
Confidence 56677888889999999999999987666665443
No 340
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=23.93 E-value=1.6e+02 Score=26.48 Aligned_cols=40 Identities=18% Similarity=0.302 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHH-HHHhCCCcEEEEee-ChhHHHHHHHHHhh
Q 044899 46 NVDDLAEQVAEV-LDFFGLEKVLCLGV-TAGAYILTLFAMKY 85 (299)
Q Consensus 46 ~~~~~~~dl~~~-l~~l~~~~~~lvGh-S~Gg~ia~~~a~~~ 85 (299)
-++++++|+... ...++..|-.|+|| |-||.+|..++.+.
T Consensus 382 yLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~l 423 (550)
T PF00862_consen 382 YLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKL 423 (550)
T ss_dssp GHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhc
Confidence 477888888654 46677777778885 88888888888654
No 341
>PLN03006 carbonate dehydratase
Probab=23.77 E-value=1.1e+02 Score=25.18 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHhCCCcEEEEeeChhHHHHH
Q 044899 50 LAEQVAEVLDFFGLEKVLCLGVTAGAYILT 79 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~ 79 (299)
....|...+.+|+++.|+|+|||-=|.+..
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~A 187 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQA 187 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHH
Confidence 456777788999999999999997665553
No 342
>PRK00771 signal recognition particle protein Srp54; Provisional
Probab=23.68 E-value=3.7e+02 Score=23.75 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=35.9
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhh--hhcceEE
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQE--RVLGLIL 94 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl 94 (299)
.++.++.+|-+|.-. .-+.+.+.+..+.+....+.++++--++-|.-+...+..+-+ .+.++|+
T Consensus 174 ~~~DvVIIDTAGr~~------------~d~~lm~El~~l~~~~~pdevlLVvda~~gq~av~~a~~F~~~l~i~gvIl 239 (437)
T PRK00771 174 KKADVIIVDTAGRHA------------LEEDLIEEMKEIKEAVKPDEVLLVIDATIGQQAKNQAKAFHEAVGIGGIII 239 (437)
T ss_pred hcCCEEEEECCCccc------------chHHHHHHHHHHHHHhcccceeEEEeccccHHHHHHHHHHHhcCCCCEEEE
Confidence 357999999999732 233445555555555444555555555445555555554432 2455555
No 343
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.34 E-value=1.2e+02 Score=25.96 Aligned_cols=18 Identities=28% Similarity=0.359 Sum_probs=16.2
Q ss_pred EEEeeChhHHHHHHHHHh
Q 044899 67 LCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~ 84 (299)
.++|.|.|+.++..++..
T Consensus 47 ~IaGtSAGALvAAl~asG 64 (382)
T cd07219 47 RVAGTSAGSVIAALVVCG 64 (382)
T ss_pred eEEEEcHHHHHHHHHHhC
Confidence 599999999999999875
No 344
>cd01528 RHOD_2 Member of the Rhodanese Homology Domain superfamily, subgroup 2. Subgroup 2 includes uncharacterized putative rhodanese-related domains.
Probab=23.29 E-value=2.2e+02 Score=18.51 Aligned_cols=21 Identities=24% Similarity=0.086 Sum_probs=13.2
Q ss_pred hhHhhhhcC-cEEEEECCCCCC
Q 044899 12 DAASLLLHN-FCIYHIDASGHE 32 (299)
Q Consensus 12 ~~~~~l~~~-~~vi~~D~~G~G 32 (299)
++.+.+..+ -.++.+|.|...
T Consensus 6 ~l~~~~~~~~~~~~iiDvR~~~ 27 (101)
T cd01528 6 ELAEWLADEREEPVLIDVREPE 27 (101)
T ss_pred HHHHHHhcCCCCCEEEECCCHH
Confidence 344455544 457889998854
No 345
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=23.18 E-value=3.2e+02 Score=20.37 Aligned_cols=53 Identities=21% Similarity=0.207 Sum_probs=36.6
Q ss_pred hhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeChh
Q 044899 16 LLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVTAG 74 (299)
Q Consensus 16 ~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~G 74 (299)
+-..|++.+.+|.=+.= . ......-.+++.+.+.++.+..+.+++.|+-.|.|
T Consensus 36 Lk~~Gik~li~DkDNTL-~-----~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTL-T-----PPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhcCceEEEEcCCCCC-C-----CCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 45679999999997752 1 11222334566667777777777678999999986
No 346
>PLN02925 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Probab=23.04 E-value=1.3e+02 Score=28.15 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=32.0
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEee
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGV 71 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGh 71 (299)
.+..-.+--||+|++ .+++++.++.+.+...++..-++.++|.
T Consensus 629 ~~kte~isCPgCGRT---------~~dlq~~~~~I~~~~~hl~GvkiavMGC 671 (733)
T PLN02925 629 NTKTEYVSCPSCGRT---------LFDLQEVSAEIREKTSHLPGVSIAIMGC 671 (733)
T ss_pred ccCCeEEECCCCCCc---------cccHHHHHHHHHHHhhcCCCceEEEEee
Confidence 344555667999977 3679999999999888876557777763
No 347
>PRK15219 carbonic anhydrase; Provisional
Probab=23.03 E-value=67 Score=25.66 Aligned_cols=33 Identities=24% Similarity=0.217 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 49 DLAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
+....|...+..|+.+.++|+||+-=|.+...+
T Consensus 128 ~~~~slEyAv~~L~v~~IvVlGHt~CGav~Aa~ 160 (245)
T PRK15219 128 DLLGSMEFACAVAGAKVVLVMGHTACGAVKGAI 160 (245)
T ss_pred chhhHHHHHHHHcCCCEEEEecCCcchHHHHHH
Confidence 345667777889999999999999766554433
No 348
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=22.92 E-value=1.2e+02 Score=27.11 Aligned_cols=52 Identities=23% Similarity=0.160 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHhCCC--cEEEEeeChhHHHHHHHHH--hhhhhhcceEEeccCCC
Q 044899 49 DLAEQVAEVLDFFGLE--KVLCLGVTAGAYILTLFAM--KYQERVLGLILVSPICK 100 (299)
Q Consensus 49 ~~~~dl~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~ 100 (299)
-....+.+-+..+|.+ ++.|+|.|.|+.-...-.. .-...++..|+-++...
T Consensus 201 LAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 201 LALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred HHHHHHHHhHHHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcCCCC
Confidence 3345666777778765 7999999999865433221 11245777777766554
No 349
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=22.57 E-value=1.7e+02 Score=17.52 Aligned_cols=31 Identities=10% Similarity=0.052 Sum_probs=24.0
Q ss_pred eEEEEcCCCCcccccChHhHHHHHHHHHhhc
Q 044899 217 GLVEVQACGSLVTEEYPLAMLIPIELFLMGF 247 (299)
Q Consensus 217 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 247 (299)
+...+-++.++.-.|..+++.+.+.+|-++.
T Consensus 28 TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 28 TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 4445556677788899999999999998764
No 350
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=22.56 E-value=2.4e+02 Score=23.74 Aligned_cols=74 Identities=12% Similarity=0.096 Sum_probs=40.7
Q ss_pred cCcEEEEECCCCCCCCCCCCCCC------------CCCCCHHHHHHHHHH-HHHHhC-CCcEEEEeeChhHHHHHHHHHh
Q 044899 19 HNFCIYHIDASGHELGADEIYSD------------FPLLNVDDLAEQVAE-VLDFFG-LEKVLCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~------------~~~~~~~~~~~dl~~-~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 84 (299)
.+-+++++=-+|.|--.-....+ ...+++..-++.... ++.+.. .++++++|.|-|+.+|--+|..
T Consensus 63 d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 63 DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 47888888888988431100000 001122222222222 233333 3589999999999999888864
Q ss_pred hhhhhcceEEec
Q 044899 85 YQERVLGLILVS 96 (299)
Q Consensus 85 ~p~~v~~lvl~~ 96 (299)
++.+=+++
T Consensus 143 ----ir~vGlls 150 (423)
T COG3673 143 ----IRHVGLLS 150 (423)
T ss_pred ----HHHhhhhc
Confidence 44444444
No 351
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.55 E-value=60 Score=26.89 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=14.9
Q ss_pred EEEeeChhHHHHHHHHH
Q 044899 67 LCLGVTAGAYILTLFAM 83 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~ 83 (299)
.+.|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68899999999998863
No 352
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=22.35 E-value=2.3e+02 Score=18.30 Aligned_cols=31 Identities=16% Similarity=0.229 Sum_probs=24.9
Q ss_pred HHHHHHHHhCCCcEEEEeeChhHHHHHHHHH
Q 044899 53 QVAEVLDFFGLEKVLCLGVTAGAYILTLFAM 83 (299)
Q Consensus 53 dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 83 (299)
.+..+-+.||.+.|.+.|.+....+|..+..
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVe 62 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVE 62 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHH
Confidence 3445556789999999999999999987754
No 353
>PF00857 Isochorismatase: Isochorismatase family; InterPro: IPR000868 This is a family of hydrolase enzymes. Isochorismatase, also known as 2,3 dihydro-2,3 dihydroxybenzoate synthase catalyses the conversion of isochorismate, in the presence of water, to 2,3-dihydroxybenzoate and pyruvate (3.3.2.1 from EC).; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1XN4_A 3KL2_F 1YZV_A 3IRV_A 1IM5_A 1ILW_A 3PL1_A 1NF9_A 1NF8_A 1X9G_A ....
Probab=22.25 E-value=3e+02 Score=20.10 Aligned_cols=51 Identities=14% Similarity=0.236 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCCCC
Q 044899 51 AEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPICKA 101 (299)
Q Consensus 51 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 101 (299)
..++..+++..+++.++|+|...-+.+..-+...+-.-++-+|+.+.....
T Consensus 100 ~t~L~~~L~~~gi~~vil~G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~ 150 (174)
T PF00857_consen 100 GTDLDEILRKRGIDTVILCGVATDVCVLATARDAFDRGYRVIVVEDACASY 150 (174)
T ss_dssp TSSHHHHHHHTTESEEEEEEESTTTHHHHHHHHHHHTT-EEEEEEEEEEBS
T ss_pred cccccccccccccceEEEcccccCcEEehhHHHHHHCCCEEEEEChhhcCC
Confidence 357888888999999999999888777554443343346666666654433
No 354
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=21.98 E-value=2.7e+02 Score=18.93 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhh
Q 044899 51 AEQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 51 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
.+++.++++.-.-+++.|+=||.-+.++...-.++
T Consensus 7 ~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 7 EEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp HHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 46777888876678999999999999988776554
No 355
>PRK12726 flagellar biosynthesis regulator FlhF; Provisional
Probab=21.88 E-value=5.4e+02 Score=22.47 Aligned_cols=65 Identities=11% Similarity=0.054 Sum_probs=37.4
Q ss_pred cCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEeeC-hhHHHHHHHHHhhh-hhhcceEEe
Q 044899 19 HNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGLEKVLCLGVT-AGAYILTLFAMKYQ-ERVLGLILV 95 (299)
Q Consensus 19 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~~~~~lvGhS-~Gg~ia~~~a~~~p-~~v~~lvl~ 95 (299)
.++.++.+|-+|... .-.++.+++..+.+.....-++++.-+ +.+.-...++..+. -.+.++|+.
T Consensus 284 ~~~D~VLIDTAGr~~------------~d~~~l~EL~~l~~~~~p~~~~LVLsag~~~~d~~~i~~~f~~l~i~glI~T 350 (407)
T PRK12726 284 NCVDHILIDTVGRNY------------LAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMTILPKLAEIPIDGFIIT 350 (407)
T ss_pred CCCCEEEEECCCCCc------------cCHHHHHHHHHHhhccCCceEEEECCCcccHHHHHHHHHhcCcCCCCEEEEE
Confidence 579999999999842 224556667777766655445555533 33333334443332 235666654
No 356
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=21.72 E-value=2.4e+02 Score=20.36 Aligned_cols=48 Identities=10% Similarity=0.108 Sum_probs=31.8
Q ss_pred HHHHHHHHHhCCCcEEEEeeChhHHHHHHHHHhhhhhhcceEEeccCC
Q 044899 52 EQVAEVLDFFGLEKVLCLGVTAGAYILTLFAMKYQERVLGLILVSPIC 99 (299)
Q Consensus 52 ~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 99 (299)
.++.++++..+++.++++|-+....+.......+..-++-.|+.+...
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~~ 135 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADACA 135 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEeccccc
Confidence 467888889999999999999876665444333323355555555443
No 357
>cd00884 beta_CA_cladeB Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.55 E-value=1.5e+02 Score=22.63 Aligned_cols=32 Identities=13% Similarity=0.217 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCCcEEEEeeChhHHHHHHH
Q 044899 50 LAEQVAEVLDFFGLEKVLCLGVTAGAYILTLF 81 (299)
Q Consensus 50 ~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~ 81 (299)
....|.-.+..++.+.++++|||-=|.+...+
T Consensus 73 ~~asleyav~~l~v~~ivV~GH~~Cgav~Aa~ 104 (190)
T cd00884 73 TSAAIEYAVAVLKVEHIVVCGHSDCGGIRALL 104 (190)
T ss_pred hhhhHHHHHHHhCCCEEEEeCCCcchHHHHHh
Confidence 45667777889999999999999766555443
No 358
>PF06833 MdcE: Malonate decarboxylase gamma subunit (MdcE); InterPro: IPR009648 This family consists of several bacterial malonate decarboxylase gamma subunit proteins. Malonate decarboxylase of Klebsiella pneumoniae consists of four different subunits and catalyses the conversion of malonate plus H+ to acetate and CO2. The catalysis proceeds via acetyl and malonyl thioester residues with the phosphribosyl-dephospho-CoA prosthetic group of the acyl carrier protein (ACP) subunit. MdcD and E together probably function as malonyl-S-ACP decarboxylase []. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=21.47 E-value=1.4e+02 Score=23.57 Aligned_cols=59 Identities=14% Similarity=0.200 Sum_probs=34.7
Q ss_pred CcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--CCCcEE--EEeeChhHH-HHHHHHH
Q 044899 20 NFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFF--GLEKVL--CLGVTAGAY-ILTLFAM 83 (299)
Q Consensus 20 ~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l--~~~~~~--lvGhS~Gg~-ia~~~a~ 83 (299)
.=-|+.+|-+|...+... +.+.+......+...+... ...|++ |+|++|+|. ++.-+.+
T Consensus 65 rpIv~lVD~~sQa~grre-----EllGi~~alAhla~a~a~AR~~GHpvI~Lv~G~A~SGaFLA~GlqA 128 (234)
T PF06833_consen 65 RPIVALVDVPSQAYGRRE-----ELLGINQALAHLAKAYALARLAGHPVIGLVYGKAMSGAFLAHGLQA 128 (234)
T ss_pred CCEEEEEeCCccccchHH-----HHhhHHHHHHHHHHHHHHHHHcCCCeEEEEecccccHHHHHHHHHh
Confidence 446889999998766432 2344555444444443332 334664 899999665 4444443
No 359
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=21.23 E-value=1.4e+02 Score=24.37 Aligned_cols=49 Identities=22% Similarity=0.390 Sum_probs=26.9
Q ss_pred CCHHHHH-HHHHHHHHHhCCC---cEEEEeeChhHHHHHHHHHhhhhhhcceEE
Q 044899 45 LNVDDLA-EQVAEVLDFFGLE---KVLCLGVTAGAYILTLFAMKYQERVLGLIL 94 (299)
Q Consensus 45 ~~~~~~~-~dl~~~l~~l~~~---~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl 94 (299)
.++++.- .-+..+++.++++ +|.=+|..|||... .+|.++.-.|.++.+
T Consensus 41 ~~Le~AQ~~k~~~~~~~~~l~~G~~vLDiGcGwG~~~~-~~a~~~g~~v~gitl 93 (273)
T PF02353_consen 41 DTLEEAQERKLDLLCEKLGLKPGDRVLDIGCGWGGLAI-YAAERYGCHVTGITL 93 (273)
T ss_dssp --HHHHHHHHHHHHHTTTT--TT-EEEEES-TTSHHHH-HHHHHH--EEEEEES
T ss_pred hhHHHHHHHHHHHHHHHhCCCCCCEEEEeCCCccHHHH-HHHHHcCcEEEEEEC
Confidence 3455543 3355566777654 68899999998654 466666545555543
No 360
>PRK13938 phosphoheptose isomerase; Provisional
Probab=20.77 E-value=2.7e+02 Score=21.32 Aligned_cols=24 Identities=21% Similarity=0.123 Sum_probs=21.0
Q ss_pred CCcEEEEeeChhHHHHHHHHHhhh
Q 044899 63 LEKVLCLGVTAGAYILTLFAMKYQ 86 (299)
Q Consensus 63 ~~~~~lvGhS~Gg~ia~~~a~~~p 86 (299)
.++++++|..-.|.+|..++.+.-
T Consensus 45 g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 45 GARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHcC
Confidence 468999999999999999998763
No 361
>PLN00022 electron transfer flavoprotein subunit alpha; Provisional
Probab=20.59 E-value=4e+02 Score=22.77 Aligned_cols=41 Identities=17% Similarity=0.003 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCcEEEEeeCh-hHHHHHHHHHhh
Q 044899 44 LLNVDDLAEQVAEVLDFFGLEKVLCLGVTA-GAYILTLFAMKY 85 (299)
Q Consensus 44 ~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~-Gg~ia~~~a~~~ 85 (299)
.|..+.+++.+.++++..+ -.++|+|++. |--++-++|.+.
T Consensus 99 ~y~~e~~a~al~~li~~~~-P~~vL~~~T~~GrdlApRlAarL 140 (356)
T PLN00022 99 HPLAEPWAKLVVLAQQKGG-YSHILAASTSFGKNVLPRAAALL 140 (356)
T ss_pred ccChHHHHHHHHHHHHhcC-CCEEEECCCCchhHHHHHHHHHh
Confidence 4788999999999999977 4677777665 447777777764
No 362
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=20.36 E-value=1.3e+02 Score=25.00 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCCcEEEEeeChhHHHHHHHH
Q 044899 51 AEQVAEVLDFFGLEKVLCLGVTAGAYILTLFA 82 (299)
Q Consensus 51 ~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 82 (299)
.+.+..+++.+.....-++|-|||+.+++.+.
T Consensus 121 W~El~~i~~w~~~~~~s~LgICwGaQa~a~al 152 (302)
T PRK05368 121 WDELKEILDWAKTHVTSTLFICWAAQAALYHL 152 (302)
T ss_pred HHHHHHHHHHHHHcCCCEEEEcHHHHHHHHHc
Confidence 33355555544433567899999999988665
No 363
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.33 E-value=1.8e+02 Score=23.18 Aligned_cols=18 Identities=28% Similarity=0.372 Sum_probs=16.1
Q ss_pred EEEeeChhHHHHHHHHHh
Q 044899 67 LCLGVTAGAYILTLFAMK 84 (299)
Q Consensus 67 ~lvGhS~Gg~ia~~~a~~ 84 (299)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 588999999999999875
No 364
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=20.19 E-value=1.6e+02 Score=24.36 Aligned_cols=21 Identities=14% Similarity=0.363 Sum_probs=17.8
Q ss_pred cEEEEeeChhHHHHHHHHHhh
Q 044899 65 KVLCLGVTAGAYILTLFAMKY 85 (299)
Q Consensus 65 ~~~lvGhS~Gg~ia~~~a~~~ 85 (299)
+++|+|.|-||.+.-++....
T Consensus 194 ~~~LiGFSKGcvVLNqll~El 214 (303)
T PF10561_consen 194 PLTLIGFSKGCVVLNQLLYEL 214 (303)
T ss_pred ceEEEEecCcchHHHHHHHHH
Confidence 789999999999988776544
No 365
>PRK03031 rnpA ribonuclease P; Reviewed
Probab=20.09 E-value=3e+02 Score=19.10 Aligned_cols=38 Identities=8% Similarity=0.064 Sum_probs=28.6
Q ss_pred hhhhcCcEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 044899 15 SLLLHNFCIYHIDASGHELGADEIYSDFPLLNVDDLAEQVAEVLDFFGL 63 (299)
Q Consensus 15 ~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~dl~~~l~~l~~ 63 (299)
..+..|+.+|.+=.+|.. ..++.++.+++..+++..+.
T Consensus 80 ~~l~~g~diVvi~r~~~~-----------~~~~~~l~~~l~~ll~k~~~ 117 (122)
T PRK03031 80 PRIAPGWDLVIIVKPTAA-----------ECNYEQFLQELEQLLIQAEI 117 (122)
T ss_pred hccCCCceEEEEECCCcc-----------cCCHHHHHHHHHHHHHHccC
Confidence 345568888887776642 35789999999999998764
Done!