Your job contains 1 sequence.
>044903
MSKYRLTISSKRQKLTQTLTTQPQAQDQDKAQDDDGDDHQPLLPGLPDHIAHLCLSHVHP
SILHNVCHSWRRLIYSPSFPPFLSLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPP
DPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP
ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR
FSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYG
IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAA
PTIFVVDTPLGFEALSVHILPRMSKLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044903
(387 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2197540 - symbol:KUF1 "KAR-UP F-box 1" species... 776 4.3e-77 1
TAIR|locus:2035696 - symbol:AT1G55270 "AT1G55270" species... 137 1.4e-06 2
TAIR|locus:2046683 - symbol:AFR "ATTENUATED FAR-RED RESPO... 124 4.8e-05 1
>TAIR|locus:2197540 [details] [associations]
symbol:KUF1 "KAR-UP F-box 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0005515 "protein
binding" evidence=IPI] [GO:0080167 "response to karrikin"
evidence=IEP] PROSITE:PS50181 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0080167 GO:GO:0016567
Gene3D:2.130.10.80 InterPro:IPR015916 EMBL:AC007654 EMBL:AK118467
EMBL:BT005351 IPI:IPI00528105 RefSeq:NP_174420.1 UniGene:At.40363
ProteinModelPortal:Q8GX29 SMR:Q8GX29 IntAct:Q8GX29 STRING:Q8GX29
PRIDE:Q8GX29 DNASU:840024 EnsemblPlants:AT1G31350.1 GeneID:840024
KEGG:ath:AT1G31350 TAIR:At1g31350 eggNOG:NOG294098
HOGENOM:HOG000242069 InParanoid:Q8GX29 OMA:LLHAVCR PhylomeDB:Q8GX29
ProtClustDB:CLSN2682379 Genevestigator:Q8GX29 Uniprot:Q8GX29
Length = 395
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 170/351 (48%), Positives = 220/351 (62%)
Query: 50 IAHLCLSHVH-PSILHNVCHSWRRLIYSPSFPPFLSLYALFSPKSNSSS--TP-IHLFTF 105
I+ +CLS VH PS+L VC WRRL+YSP FP F SLYALF ++ + P + F
Sbjct: 43 ISEICLSLVHRPSLLSAVCTRWRRLLYSPEFPSFPSLYALFVDSTSDTGRVNPSVRFMCF 102
Query: 106 DPVSSTWXXXXXXXXXXXXXXXXXXX-SFLSRNLPVQLVSLSGKLILLAATTHNFNPALT 164
+PVSS W SF+S NLP+Q VS +GKLIL+A + +PA++
Sbjct: 103 NPVSSKWYPLPPPPPDPPLHRILYRHPSFISFNLPIQCVSAAGKLILIAGSNQQLSPAIS 162
Query: 165 RPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224
PLIFDPI +W+ GP + +PRRWCA G GA+Y+ASGI SQFSS VAKSVEK DL
Sbjct: 163 HPLIFDPISSSWSSGPRIGSPRRWCATGACDGAIYIASGISSQFSSTVAKSVEKLDLTEQ 222
Query: 225 EKNSR---WEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVANTWDDM 278
+N+ WEK +++D RFSREAIDAVG++ KL +VNVKG EGA+YDVV + W+ M
Sbjct: 223 NRNNHRFNWEKLRDMRDLRFSREAIDAVGYRRKLLMVNVKGDAVKEGAIYDVVKDDWEPM 282
Query: 279 REGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVK----SDLLKXXXXXX 334
E M+ GWRGPVAAM+EE+LY +DE T+ KYD+ +W+EVV ++LK
Sbjct: 283 PEEMLVGWRGPVAAMEEEILYSVDERRGTVRKYDDEKREWREVVVVEGGEEMLKGATQVT 342
Query: 335 XXXXXXXXXXENGGGIVVVDVKAAAAPTIFVVDTPLGFEALSVHILPRMSK 385
+G IVVVDV A A I+ V+ P G E +SVH+LPRMS+
Sbjct: 343 ADSGKLCVVTGDGK-IVVVDVAAEPAK-IWNVEIPDGLEPVSVHVLPRMSQ 391
>TAIR|locus:2035696 [details] [associations]
symbol:AT1G55270 "AT1G55270" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] InterPro:IPR001810 InterPro:IPR006652
Pfam:PF00646 Pfam:PF01344 PROSITE:PS50181 SMART:SM00256
SMART:SM00612 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF81383 EMBL:AC027034 Gene3D:2.130.10.80 InterPro:IPR015916
EMBL:AF370138 EMBL:AY051069 IPI:IPI00536324 PIR:F96594
RefSeq:NP_564684.1 UniGene:At.20050 UniGene:At.68274
ProteinModelPortal:Q93W93 SMR:Q93W93 IntAct:Q93W93 PRIDE:Q93W93
EnsemblPlants:AT1G55270.1 GeneID:841972 KEGG:ath:AT1G55270
TAIR:At1g55270 eggNOG:NOG315853 HOGENOM:HOG000238888
InParanoid:Q93W93 OMA:FYNARTN PhylomeDB:Q93W93
ProtClustDB:CLSN2688830 Genevestigator:Q93W93 Uniprot:Q93W93
Length = 434
Score = 137 (53.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 44/184 (23%), Positives = 75/184 (40%)
Query: 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGI 204
LSG + L ++ R + ++ W P+++ R + +YVA G
Sbjct: 176 LSGCHLYLFGGKDPLRGSMRRVIFYNARTNKWHRAPDMLRKRHFFGCCVINNCLYVAGGE 235
Query: 205 GSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAE 264
+ +S E +D KN RW ++ + V + K L + +
Sbjct: 236 CEGIQRTL-RSAEVYD---PNKN-RWSFIADMSTAMVP---LIGVVYDKKWFLKGLGSHQ 287
Query: 265 ---GAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGID-ENSCTLSKYDEVMDDWKE 320
YD N+W + +GMV GWR P +++ LYG+D + C L +DE D W +
Sbjct: 288 LVMSEAYDPEVNSWSPVSDGMVAGWRNPCTSLNGR-LYGLDCRDGCKLRVFDESTDSWNK 346
Query: 321 VVKS 324
+ S
Sbjct: 347 FMDS 350
Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 104 TFDPVSSTW 112
TFDP+S W
Sbjct: 147 TFDPISQLW 155
>TAIR|locus:2046683 [details] [associations]
symbol:AFR "ATTENUATED FAR-RED RESPONSE" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0010017 "red or
far-red light signaling pathway" evidence=IMP] [GO:0009744
"response to sucrose stimulus" evidence=RCA] [GO:0009813 "flavonoid
biosynthetic process" evidence=RCA] [GO:0010224 "response to UV-B"
evidence=RCA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR001810
InterPro:IPR006652 Pfam:PF01344 PROSITE:PS50181 SMART:SM00256
SMART:SM00612 UniPathway:UPA00143 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF81383 GO:GO:0016567
EMBL:AC006954 EMBL:AY072009 EMBL:BT000847 EMBL:AY087570
IPI:IPI00535909 PIR:H84637 RefSeq:NP_565572.1 UniGene:At.22510
UniGene:At.28274 ProteinModelPortal:Q8LAW2 SMR:Q8LAW2 IntAct:Q8LAW2
STRING:Q8LAW2 PaxDb:Q8LAW2 PRIDE:Q8LAW2 EnsemblPlants:AT2G24540.1
GeneID:816990 KEGG:ath:AT2G24540 TAIR:At2g24540 eggNOG:NOG280757
HOGENOM:HOG000242138 InParanoid:Q8LAW2 OMA:EWRLKRY PhylomeDB:Q8LAW2
ProtClustDB:CLSN2688094 Genevestigator:Q8LAW2 GermOnline:AT2G24540
GO:GO:0009585 Gene3D:2.130.10.80 InterPro:IPR015916 Uniprot:Q8LAW2
Length = 372
Score = 124 (48.7 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 72/292 (24%), Positives = 111/292 (38%)
Query: 50 IAHLCLSHV-HP--SILHNVCHSWRRLIYSPSFPPFLSLYALFSPKSNSSSTPIHLFTFD 106
IA LCL + +P ++ +V SW + I +P F LFS +S S S+P +LF F
Sbjct: 36 IAELCLLRLPYPYHALYRSVSSSWNKTITNPRF--------LFSKQSLSISSP-YLFVFA 86
Query: 107 PVSST----WXXXXXXXXXXXXXXXXXXXSFLSRNLPVQLVSLS----GKLILLAATTHN 158
ST W SF + P L S GKL +L N
Sbjct: 87 FNKSTARIQWQSLDLASGRWFVLPPMPN-SFTKISSPHALSCASMPRQGKLFVLGGGDVN 145
Query: 159 FNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASG-IGSQFSSDVAKSVE 217
+ +++ + W+ +++PR + +G G + G +G + + VE
Sbjct: 146 RSA-----VVYTALTNRWSCISPMMSPRTYFVSGNVNGKIMAVGGSVGG--NGEATTEVE 198
Query: 218 KWDLMNGEKNSRWEKTGELK------DGR-FSREAIDAVGWKGKLCLVNVKGAEGAVYDV 270
+D N W +L D +E GW + G VYD
Sbjct: 199 SYD----PDNDTWTVVKKLPMVLAKYDSAVIGKEMCVTEGWAWPFMFPPM----GQVYDS 250
Query: 271 VANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-CTLSKYDEVMDDWKEV 321
TW +M GM GW G V+ + + L+ I E+ + Y D W+ V
Sbjct: 251 DEGTWREMSGGMKEGWTG-VSVVIRDRLFVISEHGDFPMKVYCSDDDTWRYV 301
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.425 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 387 315 0.00082 116 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 623 (66 KB)
Total size of DFA: 239 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.70u 0.10s 22.80t Elapsed: 00:00:01
Total cpu time: 22.70u 0.10s 22.80t Elapsed: 00:00:01
Start: Fri May 10 16:27:03 2013 End: Fri May 10 16:27:04 2013