Query 044903
Match_columns 387
No_of_seqs 237 out of 2638
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 13:45:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044903.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044903hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 6.2E-36 2.1E-40 275.3 32.3 248 84-366 17-281 (302)
2 3ii7_A Kelch-like protein 7; p 100.0 1.2E-35 3.9E-40 274.0 33.4 246 84-366 13-277 (306)
3 1zgk_A Kelch-like ECH-associat 100.0 6.6E-36 2.3E-40 276.1 31.7 254 84-370 26-298 (308)
4 2vpj_A Kelch-like protein 12; 100.0 2E-35 6.9E-40 271.7 30.7 249 84-366 16-283 (301)
5 4asc_A Kelch repeat and BTB do 100.0 4.9E-35 1.7E-39 271.0 28.3 242 100-367 13-283 (315)
6 2woz_A Kelch repeat and BTB do 100.0 5.1E-34 1.7E-38 264.6 26.2 241 101-368 25-294 (318)
7 4asc_A Kelch repeat and BTB do 100.0 3.7E-33 1.3E-37 258.4 24.4 218 101-345 68-305 (315)
8 2woz_A Kelch repeat and BTB do 100.0 6.9E-33 2.3E-37 256.9 24.1 234 84-344 58-314 (318)
9 2uvk_A YJHT; unknown function, 100.0 1.5E-32 5.2E-37 258.7 26.3 255 84-368 21-349 (357)
10 3ii7_A Kelch-like protein 7; p 100.0 5.2E-32 1.8E-36 249.5 26.5 249 62-337 28-294 (306)
11 2xn4_A Kelch-like protein 2; s 100.0 5.2E-32 1.8E-36 249.0 25.4 249 64-340 36-302 (302)
12 1zgk_A Kelch-like ECH-associat 100.0 4E-31 1.4E-35 244.0 26.9 215 137-366 15-245 (308)
13 2vpj_A Kelch-like protein 12; 100.0 3.6E-31 1.2E-35 243.3 26.4 246 61-336 34-299 (301)
14 2uvk_A YJHT; unknown function, 100.0 5.9E-30 2E-34 240.9 27.3 218 137-371 10-306 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.3E-28 4.3E-33 250.8 25.2 236 84-346 399-674 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.7E-27 5.6E-32 242.6 25.0 213 137-366 389-640 (695)
17 1k3i_A Galactose oxidase precu 99.9 8E-26 2.7E-30 229.5 25.0 256 66-346 174-530 (656)
18 1k3i_A Galactose oxidase precu 99.9 7.9E-26 2.7E-30 229.6 19.1 230 102-366 168-502 (656)
19 2ovr_B FBW7, F-BOX/WD repeat p 99.2 9.7E-10 3.3E-14 105.5 20.8 276 41-358 17-309 (445)
20 1p22_A F-BOX/WD-repeat protein 99.2 5.8E-10 2E-14 106.9 18.8 282 41-358 9-326 (435)
21 3v7d_B Cell division control p 99.1 1.6E-08 5.3E-13 97.4 23.0 106 249-358 276-382 (464)
22 1fs1_A SKP2 F-BOX, cyclin A/CD 98.8 1.7E-09 5.7E-14 71.1 2.6 42 40-81 6-50 (53)
23 3dsm_A Uncharacterized protein 98.6 1.2E-05 4.1E-10 73.8 22.7 221 99-366 63-308 (328)
24 3dsm_A Uncharacterized protein 98.5 2.7E-05 9.2E-10 71.4 23.7 220 99-358 16-254 (328)
25 2e31_A FBS1, F-box only protei 98.5 1.6E-08 5.5E-13 90.4 1.6 45 39-83 47-95 (297)
26 3mbr_X Glutamine cyclotransfer 98.5 2.1E-05 7.3E-10 68.4 19.4 151 190-358 25-180 (243)
27 3nol_A Glutamine cyclotransfer 98.3 4.5E-05 1.5E-09 67.0 16.7 149 192-358 49-202 (262)
28 3mbr_X Glutamine cyclotransfer 98.2 0.00081 2.8E-08 58.4 24.0 193 140-356 24-234 (243)
29 2iwa_A Glutamine cyclotransfer 98.2 0.00028 9.5E-09 62.4 21.4 197 140-358 24-238 (266)
30 1rwi_B Serine/threonine-protei 98.2 0.00049 1.7E-08 60.4 23.0 184 146-357 77-264 (270)
31 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00068 2.3E-08 62.9 24.0 164 164-354 198-375 (376)
32 3nol_A Glutamine cyclotransfer 98.2 0.00031 1.1E-08 61.6 19.7 194 140-356 46-255 (262)
33 3nok_A Glutaminyl cyclase; bet 98.1 0.00023 8E-09 62.5 17.7 148 190-358 59-211 (268)
34 2iwa_A Glutamine cyclotransfer 98.1 0.00052 1.8E-08 60.7 20.0 151 191-358 26-182 (266)
35 1l0q_A Surface layer protein; 98.1 0.00025 8.6E-09 65.9 19.1 179 148-358 3-190 (391)
36 1l0q_A Surface layer protein; 98.0 0.00059 2E-08 63.3 20.4 179 148-358 45-234 (391)
37 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.0018 6.1E-08 60.1 23.6 198 141-368 48-267 (376)
38 1rwi_B Serine/threonine-protei 98.0 0.0007 2.4E-08 59.3 19.6 191 140-358 27-223 (270)
39 1q7f_A NHL, brain tumor CG1071 98.0 0.0011 3.9E-08 58.6 21.2 188 145-357 87-280 (286)
40 3vgz_A Uncharacterized protein 98.0 0.003 1E-07 57.4 24.4 187 147-358 101-304 (353)
41 3jrp_A Fusion protein of prote 98.0 0.0015 5E-08 60.0 21.8 191 146-358 22-241 (379)
42 2z2n_A Virginiamycin B lyase; 97.9 0.0037 1.3E-07 55.2 23.1 182 145-356 66-254 (299)
43 3nok_A Glutaminyl cyclase; bet 97.9 0.0025 8.6E-08 55.9 20.9 190 139-354 57-263 (268)
44 1p22_A F-BOX/WD-repeat protein 97.9 0.0017 5.8E-08 61.5 21.1 190 141-358 177-366 (435)
45 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.0022 7.6E-08 60.8 21.2 173 165-357 260-442 (445)
46 1npe_A Nidogen, entactin; glyc 97.8 0.0057 2E-07 53.7 22.3 184 146-358 47-239 (267)
47 1q7f_A NHL, brain tumor CG1071 97.8 0.002 6.8E-08 57.0 19.0 187 145-356 39-237 (286)
48 2qc5_A Streptogramin B lactona 97.8 0.0057 2E-07 54.0 22.1 183 145-356 71-259 (300)
49 3v65_B Low-density lipoprotein 97.8 0.01 3.4E-07 55.5 24.4 184 145-358 126-319 (386)
50 3v64_C Agrin; beta propeller, 97.8 0.024 8.1E-07 52.2 26.8 184 145-358 83-276 (349)
51 2qc5_A Streptogramin B lactona 97.8 0.0033 1.1E-07 55.7 19.7 184 145-356 29-217 (300)
52 2z2n_A Virginiamycin B lyase; 97.8 0.0053 1.8E-07 54.2 21.1 188 141-358 103-296 (299)
53 3bws_A Protein LP49; two-domai 97.8 0.0017 5.8E-08 61.1 18.7 185 146-358 133-335 (433)
54 1ijq_A LDL receptor, low-densi 97.8 0.022 7.6E-07 51.5 27.3 184 146-358 41-239 (316)
55 3bws_A Protein LP49; two-domai 97.7 0.00062 2.1E-08 64.2 14.6 177 165-358 102-293 (433)
56 1gxr_A ESG1, transducin-like e 97.7 0.0032 1.1E-07 56.6 18.3 181 146-356 152-336 (337)
57 4ery_A WD repeat-containing pr 97.7 0.01 3.5E-07 53.0 21.5 188 146-358 76-269 (312)
58 1k8k_C P40, ARP2/3 complex 41 97.6 0.0038 1.3E-07 57.0 18.8 192 145-358 18-234 (372)
59 3vgz_A Uncharacterized protein 97.6 0.0077 2.6E-07 54.6 20.8 198 147-358 53-263 (353)
60 3p5b_L Low density lipoprotein 97.6 0.039 1.3E-06 51.8 26.0 191 145-365 122-328 (400)
61 3vl1_A 26S proteasome regulato 97.6 0.017 5.8E-07 53.8 23.2 189 145-358 107-323 (420)
62 3no2_A Uncharacterized protein 97.6 0.0085 2.9E-07 53.2 19.8 190 146-366 4-202 (276)
63 1k8k_C P40, ARP2/3 complex 41 97.6 0.003 1E-07 57.8 17.4 189 146-357 63-274 (372)
64 3jro_A Fusion protein of prote 97.6 0.0018 6.3E-08 66.2 17.2 191 146-358 20-239 (753)
65 4ery_A WD repeat-containing pr 97.5 0.0092 3.1E-07 53.4 19.1 187 146-358 34-224 (312)
66 1ri6_A Putative isomerase YBHE 97.5 0.0057 2E-07 55.1 17.8 145 196-356 141-307 (343)
67 3hfq_A Uncharacterized protein 97.5 0.0027 9.2E-08 57.9 15.7 228 97-356 15-270 (347)
68 2pm7_B Protein transport prote 97.5 0.012 4E-07 52.5 19.6 190 145-357 19-238 (297)
69 3no2_A Uncharacterized protein 97.5 0.023 7.7E-07 50.4 21.0 203 145-376 46-269 (276)
70 3m0c_C LDL receptor, low-densi 97.5 0.063 2.2E-06 55.0 26.7 183 146-358 435-633 (791)
71 4g56_B MGC81050 protein; prote 97.5 0.0023 8E-08 59.0 14.9 185 146-358 150-344 (357)
72 4aez_A CDC20, WD repeat-contai 97.5 0.033 1.1E-06 51.8 23.0 173 164-358 113-294 (401)
73 3ow8_A WD repeat-containing pr 97.5 0.0085 2.9E-07 54.2 18.4 181 146-355 133-319 (321)
74 3ow8_A WD repeat-containing pr 97.5 0.026 8.8E-07 51.0 21.5 184 146-358 91-280 (321)
75 3fvz_A Peptidyl-glycine alpha- 97.5 0.036 1.2E-06 50.2 22.5 199 141-357 95-322 (329)
76 1gxr_A ESG1, transducin-like e 97.4 0.011 3.7E-07 53.0 18.5 183 146-358 108-297 (337)
77 3u4y_A Uncharacterized protein 97.4 0.006 2.1E-07 55.0 16.5 175 165-358 109-305 (331)
78 4gqb_B Methylosome protein 50; 97.4 0.0028 9.7E-08 58.2 14.3 185 146-358 138-332 (344)
79 3fm0_A Protein CIAO1; WDR39,SG 97.4 0.0073 2.5E-07 55.2 17.1 189 146-356 27-224 (345)
80 3vl1_A 26S proteasome regulato 97.4 0.019 6.5E-07 53.5 20.0 105 252-358 258-366 (420)
81 3v7d_B Cell division control p 97.4 0.048 1.7E-06 51.6 22.9 184 144-354 277-462 (464)
82 1vyh_C Platelet-activating fac 97.4 0.012 4.2E-07 55.2 18.4 185 146-358 119-328 (410)
83 3u4y_A Uncharacterized protein 97.3 0.014 4.7E-07 52.5 18.1 221 99-358 19-253 (331)
84 3zwl_B Eukaryotic translation 97.3 0.017 5.7E-07 52.4 18.6 189 146-358 43-250 (369)
85 1pjx_A Dfpase, DIISOPROPYLFLUO 97.3 0.014 4.8E-07 52.0 17.8 227 100-358 46-300 (314)
86 1got_B GT-beta; complex (GTP-b 97.3 0.0075 2.6E-07 55.0 16.2 190 146-358 66-258 (340)
87 3mkq_A Coatomer beta'-subunit; 97.3 0.033 1.1E-06 56.9 22.6 189 145-358 65-260 (814)
88 4gqb_B Methylosome protein 50; 97.3 0.012 4.1E-07 54.0 17.4 175 164-358 103-290 (344)
89 1vyh_C Platelet-activating fac 97.3 0.044 1.5E-06 51.3 21.3 183 146-358 161-370 (410)
90 3v64_C Agrin; beta propeller, 97.3 0.058 2E-06 49.5 21.5 170 164-356 53-233 (349)
91 1r5m_A SIR4-interacting protei 97.3 0.014 4.9E-07 54.1 17.5 186 146-358 160-362 (425)
92 1got_B GT-beta; complex (GTP-b 97.3 0.022 7.5E-07 51.8 18.4 171 164-354 164-340 (340)
93 3dwl_C Actin-related protein 2 97.2 0.0041 1.4E-07 57.2 13.5 191 146-358 22-237 (377)
94 2aq5_A Coronin-1A; WD40 repeat 97.2 0.027 9.3E-07 52.4 19.3 191 146-358 93-300 (402)
95 1n7d_A LDL receptor, low-densi 97.2 0.011 3.9E-07 59.7 17.7 185 145-358 416-615 (699)
96 3f3f_A Nucleoporin SEH1; struc 97.2 0.076 2.6E-06 47.3 21.7 106 253-358 182-338 (351)
97 3ei3_B DNA damage-binding prot 97.2 0.019 6.3E-07 53.0 17.8 176 164-358 96-283 (383)
98 2hqs_A Protein TOLB; TOLB, PAL 97.2 0.065 2.2E-06 50.3 21.8 186 146-358 189-388 (415)
99 3v65_B Low-density lipoprotein 97.2 0.041 1.4E-06 51.3 20.0 170 164-356 96-276 (386)
100 3sov_A LRP-6, low-density lipo 97.2 0.12 4.1E-06 46.7 23.6 183 146-358 46-239 (318)
101 3iz6_a 40S ribosomal protein R 97.2 0.058 2E-06 49.8 21.0 135 215-358 181-330 (380)
102 2ynn_A Coatomer subunit beta'; 97.2 0.078 2.7E-06 47.2 21.1 185 145-358 65-260 (304)
103 2dg1_A DRP35, lactonase; beta 97.2 0.014 4.8E-07 52.7 16.3 190 145-356 54-262 (333)
104 4aez_A CDC20, WD repeat-contai 97.2 0.081 2.8E-06 49.1 22.0 184 146-358 145-337 (401)
105 2ynn_A Coatomer subunit beta'; 97.2 0.022 7.5E-07 50.9 17.2 187 146-358 24-218 (304)
106 3fvz_A Peptidyl-glycine alpha- 97.2 0.081 2.8E-06 47.8 21.2 184 164-358 69-278 (329)
107 1kb0_A Quinohemoprotein alcoho 97.1 0.19 6.5E-06 50.6 25.2 203 142-366 73-353 (677)
108 3jrp_A Fusion protein of prote 97.1 0.0096 3.3E-07 54.3 14.6 149 195-358 22-192 (379)
109 1yfq_A Cell cycle arrest prote 97.1 0.02 6.7E-07 51.6 16.4 185 145-358 66-283 (342)
110 2pbi_B Guanine nucleotide-bind 97.1 0.037 1.3E-06 50.7 18.3 172 164-354 176-354 (354)
111 3bg1_A Protein SEC13 homolog; 97.1 0.0095 3.3E-07 53.7 14.0 190 146-357 24-247 (316)
112 1r5m_A SIR4-interacting protei 97.1 0.011 3.8E-07 54.8 14.8 174 164-356 227-424 (425)
113 3mkq_A Coatomer beta'-subunit; 97.1 0.031 1.1E-06 57.0 19.5 187 146-358 24-218 (814)
114 4g56_B MGC81050 protein; prote 97.1 0.013 4.4E-07 53.9 15.0 176 164-358 115-302 (357)
115 3scy_A Hypothetical bacterial 97.1 0.02 7E-07 52.3 16.4 230 97-356 26-290 (361)
116 4a11_B DNA excision repair pro 97.1 0.018 6.2E-07 53.1 16.0 145 195-358 111-277 (408)
117 3odt_A Protein DOA1; ubiquitin 97.1 0.079 2.7E-06 46.6 19.7 105 249-358 192-297 (313)
118 3i2n_A WD repeat-containing pr 97.0 0.031 1.1E-06 50.4 17.2 178 164-358 44-244 (357)
119 1w6s_A Methanol dehydrogenase 97.0 0.21 7.1E-06 49.4 24.1 205 142-367 58-350 (599)
120 3hfq_A Uncharacterized protein 97.0 0.0097 3.3E-07 54.1 13.7 182 165-357 19-218 (347)
121 2ad6_A Methanol dehydrogenase 97.0 0.29 9.9E-06 48.1 26.4 206 142-368 58-344 (571)
122 2pbi_B Guanine nucleotide-bind 97.0 0.026 8.7E-07 51.8 16.4 190 146-358 75-272 (354)
123 3odt_A Protein DOA1; ubiquitin 97.0 0.1 3.4E-06 46.0 19.9 186 145-358 27-215 (313)
124 3k26_A Polycomb protein EED; W 97.0 0.033 1.1E-06 50.4 17.0 187 147-358 85-319 (366)
125 3i2n_A WD repeat-containing pr 97.0 0.02 6.8E-07 51.7 15.4 187 146-357 128-353 (357)
126 2hes_X YDR267CP; beta-propelle 97.0 0.025 8.6E-07 51.2 16.0 189 146-357 118-328 (330)
127 4gga_A P55CDC, cell division c 97.0 0.14 4.9E-06 47.7 21.7 178 164-358 125-311 (420)
128 4e54_B DNA damage-binding prot 97.0 0.014 4.9E-07 55.1 14.7 189 147-358 132-328 (435)
129 1erj_A Transcriptional repress 97.0 0.069 2.4E-06 49.6 19.1 187 146-358 134-342 (393)
130 2p4o_A Hypothetical protein; p 96.9 0.077 2.6E-06 47.5 18.5 190 145-356 41-241 (306)
131 3e5z_A Putative gluconolactona 96.9 0.13 4.5E-06 45.3 19.9 190 145-358 78-287 (296)
132 1sq9_A Antiviral protein SKI8; 96.9 0.061 2.1E-06 49.4 18.3 106 252-358 197-323 (397)
133 3e5z_A Putative gluconolactona 96.9 0.17 5.8E-06 44.6 20.5 182 148-356 41-245 (296)
134 1sq9_A Antiviral protein SKI8; 96.9 0.11 3.8E-06 47.6 20.0 200 142-358 21-268 (397)
135 2pm9_A Protein WEB1, protein t 96.9 0.027 9.2E-07 52.2 15.8 147 196-358 178-338 (416)
136 1pjx_A Dfpase, DIISOPROPYLFLUO 96.9 0.06 2E-06 47.8 17.5 193 145-356 27-255 (314)
137 2ast_B S-phase kinase-associat 96.9 0.0004 1.4E-08 63.5 2.9 42 40-81 6-50 (336)
138 3hrp_A Uncharacterized protein 96.9 0.093 3.2E-06 49.3 19.4 198 141-358 135-355 (409)
139 1ijq_A LDL receptor, low-densi 96.9 0.14 4.8E-06 46.1 19.7 168 164-356 10-194 (316)
140 1pgu_A Actin interacting prote 96.8 0.11 3.9E-06 50.6 20.4 142 196-356 456-613 (615)
141 3sfz_A APAF-1, apoptotic pepti 96.8 0.019 6.7E-07 61.8 15.8 186 146-358 972-1159(1249)
142 2fp8_A Strictosidine synthase; 96.8 0.061 2.1E-06 48.4 16.9 198 140-358 83-314 (322)
143 4aow_A Guanine nucleotide-bind 96.8 0.077 2.6E-06 47.5 17.6 142 197-358 186-338 (340)
144 1yiq_A Quinohemoprotein alcoho 96.8 0.33 1.1E-05 48.9 23.8 116 143-277 67-199 (689)
145 2dg1_A DRP35, lactonase; beta 96.8 0.02 6.8E-07 51.6 13.6 143 195-356 55-212 (333)
146 3bg1_A Protein SEC13 homolog; 96.8 0.041 1.4E-06 49.4 15.6 194 147-366 71-299 (316)
147 4a0p_A LRP6, LRP-6, low-densit 96.8 0.5 1.7E-05 47.0 28.8 182 145-358 47-238 (628)
148 3k26_A Polycomb protein EED; W 96.8 0.19 6.6E-06 45.2 20.2 146 196-358 85-261 (366)
149 2aq5_A Coronin-1A; WD40 repeat 96.8 0.2 6.9E-06 46.3 20.6 147 195-358 93-255 (402)
150 3l2o_B F-box only protein 4; s 96.8 0.00023 7.7E-09 63.0 0.1 40 42-81 4-46 (312)
151 4a11_B DNA excision repair pro 96.8 0.1 3.4E-06 47.9 18.4 105 252-358 256-366 (408)
152 1kv9_A Type II quinohemoprotei 96.7 0.25 8.5E-06 49.6 22.3 197 142-358 62-334 (668)
153 2ece_A 462AA long hypothetical 96.7 0.4 1.4E-05 45.3 22.4 194 146-357 95-352 (462)
154 2vdu_B TRNA (guanine-N(7)-)-me 96.7 0.25 8.6E-06 46.6 21.3 134 196-346 210-373 (450)
155 3dwl_C Actin-related protein 2 96.7 0.0073 2.5E-07 55.5 10.2 147 195-356 22-176 (377)
156 1yfq_A Cell cycle arrest prote 96.7 0.075 2.6E-06 47.6 16.8 185 146-358 22-226 (342)
157 2hes_X YDR267CP; beta-propelle 96.7 0.28 9.6E-06 44.1 20.3 183 164-357 34-230 (330)
158 3jro_A Fusion protein of prote 96.7 0.016 5.5E-07 59.2 13.1 149 195-358 20-190 (753)
159 3iz6_a 40S ribosomal protein R 96.7 0.28 9.5E-06 45.1 20.6 178 164-357 180-375 (380)
160 2pm7_B Protein transport prote 96.6 0.081 2.8E-06 46.9 16.3 147 195-357 20-189 (297)
161 1erj_A Transcriptional repress 96.6 0.087 3E-06 48.9 17.2 143 195-357 134-287 (393)
162 1jmx_B Amine dehydrogenase; ox 96.6 0.093 3.2E-06 47.1 17.0 152 146-319 10-179 (349)
163 3g4e_A Regucalcin; six bladed 96.6 0.068 2.3E-06 47.5 15.8 177 145-346 63-262 (297)
164 1ri6_A Putative isomerase YBHE 96.6 0.043 1.5E-06 49.2 14.5 180 164-356 60-261 (343)
165 3mmy_A MRNA export factor; mRN 96.6 0.28 9.5E-06 44.1 19.9 184 146-358 97-305 (368)
166 3fm0_A Protein CIAO1; WDR39,SG 96.6 0.062 2.1E-06 48.9 15.3 149 195-357 27-181 (345)
167 3g4e_A Regucalcin; six bladed 96.6 0.15 5.1E-06 45.2 17.5 186 146-358 24-230 (297)
168 2pm9_A Protein WEB1, protein t 96.6 0.045 1.6E-06 50.6 14.5 105 253-358 178-295 (416)
169 3s94_A LRP-6, low-density lipo 96.5 0.45 1.5E-05 47.3 22.3 184 146-358 360-552 (619)
170 3v9f_A Two-component system se 96.5 0.24 8.2E-06 50.6 21.0 212 101-357 428-656 (781)
171 4aow_A Guanine nucleotide-bind 96.5 0.087 3E-06 47.1 15.9 185 146-357 97-286 (340)
172 3zwl_B Eukaryotic translation 96.5 0.11 3.6E-06 46.9 16.4 142 195-358 186-347 (369)
173 3scy_A Hypothetical bacterial 96.5 0.13 4.5E-06 46.7 17.1 181 166-358 31-243 (361)
174 2p4o_A Hypothetical protein; p 96.5 0.19 6.5E-06 44.8 17.7 144 195-357 42-198 (306)
175 2ojh_A Uncharacterized protein 96.4 0.25 8.7E-06 42.6 17.9 219 98-358 20-259 (297)
176 3v9f_A Two-component system se 96.4 0.71 2.4E-05 47.0 23.6 185 146-358 417-612 (781)
177 4e54_B DNA damage-binding prot 96.4 0.047 1.6E-06 51.4 13.9 146 195-358 131-283 (435)
178 3ei3_B DNA damage-binding prot 96.4 0.21 7.3E-06 45.7 18.1 143 197-357 87-236 (383)
179 3m0c_C LDL receptor, low-densi 96.4 0.37 1.3E-05 49.3 21.1 169 165-356 405-588 (791)
180 2vdu_B TRNA (guanine-N(7)-)-me 96.4 0.23 7.8E-06 46.8 18.7 66 253-320 210-276 (450)
181 3p5b_L Low density lipoprotein 96.4 0.22 7.7E-06 46.5 18.0 173 164-356 92-276 (400)
182 4gga_A P55CDC, cell division c 96.3 0.4 1.4E-05 44.7 19.8 185 145-358 157-354 (420)
183 3lrv_A PRE-mRNA-splicing facto 96.3 0.38 1.3E-05 43.4 18.9 153 195-366 138-299 (343)
184 3hrp_A Uncharacterized protein 96.3 0.72 2.5E-05 43.1 23.0 176 165-355 195-408 (409)
185 1npe_A Nidogen, entactin; glyc 96.2 0.52 1.8E-05 40.8 25.6 151 146-320 90-243 (267)
186 3mmy_A MRNA export factor; mRN 96.2 0.31 1.1E-05 43.8 17.8 183 147-358 54-248 (368)
187 2ad6_A Methanol dehydrogenase 96.2 0.36 1.2E-05 47.5 19.2 122 189-321 56-193 (571)
188 4a2l_A BT_4663, two-component 96.2 0.78 2.7E-05 46.9 22.4 181 146-357 462-659 (795)
189 3f3f_A Nucleoporin SEH1; struc 96.1 0.64 2.2E-05 41.0 21.4 195 146-358 22-250 (351)
190 2xyi_A Probable histone-bindin 96.1 0.19 6.5E-06 47.2 16.2 105 252-357 243-353 (430)
191 2p1m_B Transport inhibitor res 96.1 0.0018 6.2E-08 64.0 2.1 34 40-73 3-40 (594)
192 4a2l_A BT_4663, two-component 96.1 0.7 2.4E-05 47.2 21.6 172 165-358 428-615 (795)
193 3sfz_A APAF-1, apoptotic pepti 96.1 0.92 3.1E-05 48.7 23.4 146 145-317 625-776 (1249)
194 2xzm_R RACK1; ribosome, transl 96.0 0.73 2.5E-05 41.5 19.2 141 195-356 87-243 (343)
195 1pgu_A Actin interacting prote 96.0 0.32 1.1E-05 47.4 17.9 146 198-357 175-328 (615)
196 3dm0_A Maltose-binding peripla 96.0 0.22 7.6E-06 50.0 17.0 188 145-358 440-633 (694)
197 3s94_A LRP-6, low-density lipo 95.9 1.3 4.6E-05 43.8 22.0 183 145-358 50-244 (619)
198 2ghs_A AGR_C_1268P; regucalcin 95.9 0.63 2.2E-05 41.8 18.2 182 146-356 60-259 (326)
199 3frx_A Guanine nucleotide-bind 95.9 0.73 2.5E-05 41.1 18.4 181 145-356 75-266 (319)
200 1pby_B Quinohemoprotein amine 95.9 0.19 6.6E-06 44.6 14.5 138 164-319 11-167 (337)
201 1nr0_A Actin interacting prote 95.9 0.57 1.9E-05 46.2 19.0 149 195-358 201-356 (611)
202 1nir_A Nitrite reductase; hemo 95.8 0.97 3.3E-05 44.0 20.2 186 146-358 148-356 (543)
203 2hqs_A Protein TOLB; TOLB, PAL 95.8 0.61 2.1E-05 43.5 18.2 139 164-322 247-394 (415)
204 1nir_A Nitrite reductase; hemo 95.8 1.6 5.3E-05 42.5 25.1 268 44-357 95-402 (543)
205 1kb0_A Quinohemoprotein alcoho 95.7 1.9 6.5E-05 43.2 26.7 61 306-371 457-519 (677)
206 3lrv_A PRE-mRNA-splicing facto 95.7 1.1 3.7E-05 40.2 19.9 179 146-349 138-335 (343)
207 2hz6_A Endoplasmic reticulum t 95.7 0.0082 2.8E-07 55.7 4.6 185 145-368 8-201 (369)
208 2z3z_A Dipeptidyl aminopeptida 95.7 1.3 4.6E-05 44.1 21.4 182 164-358 235-436 (706)
209 3gre_A Serine/threonine-protei 95.7 0.69 2.4E-05 43.0 18.0 149 146-317 181-361 (437)
210 1flg_A Protein (quinoprotein e 95.6 1.9 6.4E-05 42.4 24.3 206 142-369 64-365 (582)
211 3dm0_A Maltose-binding peripla 95.6 0.54 1.8E-05 47.1 18.0 143 195-358 441-593 (694)
212 1w6s_A Methanol dehydrogenase 95.6 0.7 2.4E-05 45.6 18.1 122 189-321 56-199 (599)
213 3hxj_A Pyrrolo-quinoline quino 95.6 1.2 4E-05 39.5 20.2 182 145-369 106-293 (330)
214 3sov_A LRP-6, low-density lipo 95.5 0.95 3.3E-05 40.7 17.5 144 195-356 46-196 (318)
215 3tc9_A Hypothetical hydrolase; 95.5 0.94 3.2E-05 42.6 18.1 186 146-356 149-370 (430)
216 1yiq_A Quinohemoprotein alcoho 95.4 1.2 4E-05 44.9 19.5 120 190-321 65-200 (689)
217 4hw6_A Hypothetical protein, I 95.4 0.93 3.2E-05 42.8 17.8 187 147-356 153-373 (433)
218 2xbg_A YCF48-like protein; pho 95.4 1.4 4.9E-05 39.5 23.0 182 145-355 131-320 (327)
219 2ymu_A WD-40 repeat protein; u 95.4 0.29 1E-05 47.5 14.8 136 195-354 437-577 (577)
220 3gre_A Serine/threonine-protei 95.3 0.71 2.4E-05 42.9 16.8 148 195-358 181-360 (437)
221 3dr2_A Exported gluconolactona 95.3 1 3.5E-05 39.8 17.1 183 147-357 57-267 (305)
222 4ggc_A P55CDC, cell division c 95.3 1.3 4.6E-05 38.6 20.3 136 164-316 45-182 (318)
223 3frx_A Guanine nucleotide-bind 95.2 0.48 1.6E-05 42.3 14.7 142 195-358 76-228 (319)
224 4a0p_A LRP6, LRP-6, low-densit 95.2 2.7 9.3E-05 41.7 21.7 142 195-357 48-197 (628)
225 1pby_B Quinohemoprotein amine 95.2 0.68 2.3E-05 40.9 15.6 134 215-358 12-164 (337)
226 1kv9_A Type II quinohemoprotei 95.2 2.9 9.9E-05 41.8 27.3 62 306-372 438-501 (668)
227 1qks_A Cytochrome CD1 nitrite 95.1 1.8 6.2E-05 42.4 19.3 186 146-358 166-374 (567)
228 1nr0_A Actin interacting prote 95.0 2.1 7.1E-05 42.1 19.9 188 146-356 201-396 (611)
229 2qe8_A Uncharacterized protein 94.9 0.96 3.3E-05 40.9 15.9 200 140-350 70-314 (343)
230 1n7d_A LDL receptor, low-densi 94.9 0.16 5.6E-06 51.2 11.5 169 165-356 387-570 (699)
231 4h5i_A Guanine nucleotide-exch 94.9 2.2 7.4E-05 38.9 20.2 191 145-358 143-344 (365)
232 2oaj_A Protein SNI1; WD40 repe 94.9 0.84 2.9E-05 47.5 17.2 133 215-358 80-243 (902)
233 3ott_A Two-component system se 94.9 1.5 5.2E-05 44.4 18.7 141 195-357 482-626 (758)
234 2ymu_A WD-40 repeat protein; u 94.7 3.2 0.00011 39.9 21.5 179 146-356 314-497 (577)
235 2ghs_A AGR_C_1268P; regucalcin 94.5 1.1 3.6E-05 40.3 14.8 139 195-356 60-209 (326)
236 2xzm_R RACK1; ribosome, transl 94.4 2.6 9E-05 37.7 18.5 100 254-358 185-286 (343)
237 3vu4_A KMHSV2; beta-propeller 94.4 2.8 9.6E-05 37.9 20.1 62 295-358 206-272 (355)
238 3hxj_A Pyrrolo-quinoline quino 94.3 0.73 2.5E-05 40.8 13.3 168 164-367 40-211 (330)
239 1jmx_B Amine dehydrogenase; ox 94.2 0.34 1.2E-05 43.3 11.0 106 251-357 9-134 (349)
240 3azo_A Aminopeptidase; POP fam 94.2 2.5 8.4E-05 41.8 18.2 180 164-358 161-370 (662)
241 3ogk_B Coronatine-insensitive 94.2 0.015 5.1E-07 57.4 1.8 32 43-74 13-48 (592)
242 3ott_A Two-component system se 94.1 3.1 0.0001 42.1 19.0 177 145-357 72-260 (758)
243 3c5m_A Oligogalacturonate lyas 94.1 2 6.8E-05 38.9 16.2 182 164-358 168-385 (396)
244 4ggc_A P55CDC, cell division c 94.0 2.6 8.7E-05 36.7 16.2 134 215-358 46-182 (318)
245 2ojh_A Uncharacterized protein 93.9 2.8 9.4E-05 35.8 17.9 173 163-356 21-205 (297)
246 3tc9_A Hypothetical hydrolase; 93.8 0.97 3.3E-05 42.6 13.6 143 195-356 149-300 (430)
247 3dr2_A Exported gluconolactona 93.7 1.3 4.4E-05 39.1 13.7 102 252-357 96-224 (305)
248 2fp8_A Strictosidine synthase; 93.6 0.84 2.9E-05 40.7 12.4 135 164-316 165-314 (322)
249 2xyi_A Probable histone-bindin 93.6 1.2 4.1E-05 41.5 14.0 103 255-357 196-309 (430)
250 3dw8_B Serine/threonine-protei 93.5 1.7 5.8E-05 40.2 14.8 104 252-357 188-315 (447)
251 3c5m_A Oligogalacturonate lyas 93.4 3.3 0.00011 37.4 16.4 144 164-322 216-391 (396)
252 3vu4_A KMHSV2; beta-propeller 93.4 4.4 0.00015 36.5 22.1 114 252-366 206-345 (355)
253 3pe7_A Oligogalacturonate lyas 93.3 2.9 0.0001 37.8 15.8 187 164-358 168-385 (388)
254 2p9w_A MAL S 1 allergenic prot 93.0 5 0.00017 36.2 20.5 198 146-356 24-263 (334)
255 3o4h_A Acylamino-acid-releasin 92.9 1.3 4.6E-05 43.1 13.5 169 164-355 90-274 (582)
256 1qks_A Cytochrome CD1 nitrite 92.8 7.6 0.00026 37.9 23.5 94 263-357 320-421 (567)
257 2hz6_A Endoplasmic reticulum t 92.6 0.033 1.1E-06 51.6 1.3 148 191-366 5-156 (369)
258 2z3z_A Dipeptidyl aminopeptida 92.6 8.8 0.0003 38.0 23.6 139 213-358 234-392 (706)
259 3azo_A Aminopeptidase; POP fam 92.0 10 0.00034 37.3 19.0 145 164-322 217-376 (662)
260 3o4h_A Acylamino-acid-releasin 91.8 8.1 0.00028 37.4 17.5 107 247-358 115-228 (582)
261 2qe8_A Uncharacterized protein 91.7 7.1 0.00024 34.9 20.5 205 140-356 20-277 (343)
262 1flg_A Protein (quinoprotein e 91.1 3.7 0.00013 40.2 14.1 119 190-320 63-200 (582)
263 2mad_H Methylamine dehydrogena 90.8 9.6 0.00033 34.8 23.6 63 294-358 277-351 (373)
264 4hw6_A Hypothetical protein, I 90.6 7.9 0.00027 36.3 15.4 142 196-356 153-303 (433)
265 3pe7_A Oligogalacturonate lyas 90.2 5 0.00017 36.2 13.6 147 163-318 215-387 (388)
266 1qhu_A Protein (hemopexin); be 90.2 13 0.00043 35.2 16.2 200 146-377 158-406 (460)
267 1k32_A Tricorn protease; prote 90.1 21 0.0007 37.5 24.0 133 215-358 318-462 (1045)
268 3iuj_A Prolyl endopeptidase; h 89.9 17 0.00058 36.2 20.7 132 214-358 259-406 (693)
269 2ecf_A Dipeptidyl peptidase IV 89.7 17 0.00059 36.1 20.1 92 264-356 264-368 (741)
270 2ecf_A Dipeptidyl peptidase IV 89.4 18 0.00062 35.9 22.6 100 215-321 264-374 (741)
271 3dw8_B Serine/threonine-protei 89.2 13 0.00045 34.0 16.7 68 252-320 296-378 (447)
272 3sre_A PON1, serum paraoxonase 89.2 13 0.00044 33.9 15.4 179 163-356 82-297 (355)
273 3kya_A Putative phosphatase; s 89.0 6.1 0.00021 37.8 13.2 144 195-356 151-340 (496)
274 2xbg_A YCF48-like protein; pho 88.5 13 0.00044 33.1 20.7 172 172-366 23-198 (327)
275 2be1_A Serine/threonine-protei 88.0 1.7 5.8E-05 39.5 8.3 111 252-366 10-137 (339)
276 2bkl_A Prolyl endopeptidase; m 88.0 23 0.00077 35.2 22.0 143 164-320 202-356 (695)
277 2oaj_A Protein SNI1; WD40 repe 87.3 16 0.00054 37.8 16.2 104 251-358 67-183 (902)
278 4h5i_A Guanine nucleotide-exch 87.1 14 0.00048 33.3 14.2 133 215-358 158-301 (365)
279 2oiz_A Aromatic amine dehydrog 86.7 18 0.0006 32.7 16.0 104 164-274 31-142 (361)
280 1fwx_A Nitrous oxide reductase 86.4 26 0.00088 34.3 16.5 185 163-357 111-361 (595)
281 1pex_A Collagenase-3, MMP-13; 85.2 15 0.00052 30.5 18.0 147 144-319 31-196 (207)
282 4gq1_A NUP37; propeller, trans 85.0 5.9 0.0002 36.2 10.6 105 252-358 155-287 (393)
283 1yr2_A Prolyl oligopeptidase; 84.2 31 0.0011 34.5 16.4 145 163-323 293-449 (741)
284 2w18_A PALB2, fancn, partner a 84.1 24 0.00084 32.0 18.5 147 195-356 192-356 (356)
285 3oyo_A Hemopexin fold protein 84.0 6.5 0.00022 33.2 9.5 65 246-314 118-197 (225)
286 3sjl_D Methylamine dehydrogena 84.0 26 0.00089 32.2 21.0 104 252-358 237-364 (386)
287 2mad_H Methylamine dehydrogena 83.6 26 0.00088 31.9 23.4 192 145-358 76-308 (373)
288 2p9w_A MAL S 1 allergenic prot 83.2 26 0.00087 31.5 15.7 64 294-357 146-215 (334)
289 1jof_A Carboxy-CIS,CIS-muconat 82.4 27 0.00092 31.2 16.4 137 214-357 167-341 (365)
290 2xdw_A Prolyl endopeptidase; a 82.3 42 0.0014 33.3 21.3 200 145-356 134-367 (710)
291 3sjl_D Methylamine dehydrogena 82.1 4.8 0.00017 37.2 8.5 102 252-358 44-170 (386)
292 3b7f_A Glycosyl hydrolase, BNR 81.7 31 0.001 31.4 19.6 184 166-366 33-267 (394)
293 3ei3_A DNA damage-binding prot 81.3 61 0.0021 34.6 17.8 137 212-357 862-999 (1158)
294 2gop_A Trilobed protease; beta 80.9 28 0.00096 30.5 17.4 168 164-354 85-290 (347)
295 3c75_H MADH, methylamine dehyd 79.7 5.2 0.00018 37.5 8.0 102 252-358 84-210 (426)
296 2xdw_A Prolyl endopeptidase; a 79.5 51 0.0018 32.6 24.3 180 163-358 207-415 (710)
297 3qqz_A Putative uncharacterize 79.2 30 0.001 29.7 17.7 145 195-356 38-203 (255)
298 1xfd_A DIP, dipeptidyl aminope 78.3 54 0.0019 32.2 20.1 101 214-317 228-347 (723)
299 1k32_A Tricorn protease; prote 77.5 35 0.0012 35.7 14.5 98 215-321 359-467 (1045)
300 2j04_B YDR362CP, TAU91; beta p 76.9 14 0.00047 35.6 10.3 101 254-357 324-428 (524)
301 2oit_A Nucleoporin 214KDA; NH2 76.5 29 0.001 32.2 12.3 144 196-356 162-332 (434)
302 2j04_B YDR362CP, TAU91; beta p 75.9 57 0.0019 31.2 14.5 103 252-358 276-387 (524)
303 2bkl_A Prolyl endopeptidase; m 75.7 65 0.0022 31.8 25.7 203 145-356 130-350 (695)
304 3b7f_A Glycosyl hydrolase, BNR 74.5 50 0.0017 29.9 25.5 192 146-366 128-377 (394)
305 1qhu_A Protein (hemopexin); be 74.4 59 0.002 30.6 18.8 136 195-356 158-330 (460)
306 3amr_A 3-phytase; beta-propell 74.0 51 0.0018 29.8 18.1 134 214-356 99-262 (355)
307 3iuj_A Prolyl endopeptidase; h 73.5 75 0.0026 31.4 16.3 144 164-323 259-413 (693)
308 1itv_A MMP9; adaptive molecula 72.9 37 0.0013 27.7 15.8 139 143-317 13-176 (195)
309 2ece_A 462AA long hypothetical 72.4 65 0.0022 30.3 18.3 50 305-356 227-288 (462)
310 2oit_A Nucleoporin 214KDA; NH2 72.2 5.6 0.00019 37.2 6.0 59 296-356 162-222 (434)
311 2cn3_A Xyloglucanase, beta-1,4 72.0 22 0.00075 35.8 10.7 99 252-356 620-732 (737)
312 3kya_A Putative phosphatase; s 71.3 22 0.00075 34.0 9.9 105 252-356 151-277 (496)
313 2j04_A TAU60, YPL007P, hypothe 71.2 35 0.0012 33.3 11.4 105 252-358 96-212 (588)
314 3c7x_A Matrix metalloproteinas 71.1 41 0.0014 27.5 13.8 60 252-317 109-177 (196)
315 4gq1_A NUP37; propeller, trans 70.9 24 0.00082 32.0 10.0 103 254-358 102-219 (393)
316 3lp9_A LS-24; SEED albumin, pl 70.9 29 0.00098 29.2 9.6 61 252-316 129-202 (227)
317 2j04_A TAU60, YPL007P, hypothe 70.8 81 0.0028 30.7 16.9 102 251-358 139-255 (588)
318 3c75_H MADH, methylamine dehyd 70.8 68 0.0023 29.8 18.4 63 294-358 329-403 (426)
319 2kwv_A RAD30 homolog B, DNA po 66.3 2.8 9.6E-05 25.2 1.6 20 39-58 17-36 (48)
320 2oiz_A Aromatic amine dehydrog 64.8 62 0.0021 28.9 11.4 59 294-357 264-334 (361)
321 1xfd_A DIP, dipeptidyl aminope 63.2 1.1E+02 0.0037 30.0 13.8 67 165-235 38-108 (723)
322 2w18_A PALB2, fancn, partner a 62.9 89 0.003 28.3 17.4 153 146-313 192-355 (356)
323 1mda_H Methylamine dehydrogena 60.2 18 0.00062 33.0 6.7 101 252-356 31-157 (368)
324 3lp9_A LS-24; SEED albumin, pl 59.6 16 0.00056 30.8 5.9 106 145-273 71-202 (227)
325 1mda_H Methylamine dehydrogena 58.2 43 0.0015 30.5 8.9 102 252-357 222-346 (368)
326 3ba0_A Macrophage metalloelast 57.3 1.1E+02 0.0038 27.6 17.2 65 252-320 284-355 (365)
327 3qqz_A Putative uncharacterize 57.2 91 0.0031 26.6 21.6 191 146-356 38-252 (255)
328 1su3_A Interstitial collagenas 55.5 1.3E+02 0.0046 28.0 17.0 63 252-320 367-437 (450)
329 1jof_A Carboxy-CIS,CIS-muconat 54.3 1.1E+02 0.0039 26.9 18.6 68 252-319 265-345 (365)
330 3a9g_A Putative uncharacterize 52.7 1.3E+02 0.0044 26.9 14.3 106 249-357 36-178 (354)
331 3q6k_A 43.2 kDa salivary prote 51.6 1.4E+02 0.0047 27.3 11.1 28 295-322 170-198 (381)
332 2gop_A Trilobed protease; beta 50.8 1.2E+02 0.0042 26.1 13.9 160 163-354 42-250 (347)
333 1cru_A Protein (soluble quinop 48.3 1.2E+02 0.0042 28.2 10.6 94 252-345 37-162 (454)
334 1itv_A MMP9; adaptive molecula 47.0 1.1E+02 0.0039 24.7 16.0 100 252-357 64-174 (195)
335 1gen_A Gelatinase A; hydrolase 46.9 1.2E+02 0.0042 25.0 15.1 99 252-356 87-201 (218)
336 1gen_A Gelatinase A; hydrolase 46.5 1.2E+02 0.0043 25.0 16.7 60 252-317 135-204 (218)
337 1xip_A Nucleoporin NUP159; bet 45.7 1.8E+02 0.0061 26.5 12.2 97 252-358 96-192 (388)
338 3sre_A PON1, serum paraoxonase 44.6 1.8E+02 0.006 26.2 17.0 154 195-356 60-251 (355)
339 1tl2_A L10, protein (tachylect 43.4 78 0.0027 26.7 7.3 64 252-319 51-123 (236)
340 2xe4_A Oligopeptidase B; hydro 36.5 3.3E+02 0.011 27.1 15.7 197 146-355 185-398 (751)
341 1fwx_A Nitrous oxide reductase 35.7 1.7E+02 0.0057 28.6 9.3 81 294-376 100-201 (595)
342 1yr2_A Prolyl oligopeptidase; 34.7 3.5E+02 0.012 26.7 19.0 136 213-358 293-442 (741)
343 1z68_A Fibroblast activation p 34.1 3.4E+02 0.012 26.4 17.3 71 252-322 263-353 (719)
344 1hxn_A Hemopexin, HPX; heme, b 33.6 2E+02 0.007 23.7 14.0 144 140-315 20-197 (219)
345 1pex_A Collagenase-3, MMP-13; 33.3 2E+02 0.0068 23.5 18.3 101 252-358 79-193 (207)
346 3a0f_A Xyloglucanase; beta-pro 32.7 3.9E+02 0.013 26.7 14.7 94 230-325 167-294 (763)
347 1sqj_A OXG-RCBH, oligoxylogluc 31.3 4.2E+02 0.014 26.6 15.7 94 230-325 155-279 (789)
348 2be1_A Serine/threonine-protei 29.3 80 0.0027 28.3 5.6 62 296-358 11-77 (339)
349 4a5s_A Dipeptidyl peptidase 4 29.3 1.8E+02 0.0063 28.7 9.0 101 252-356 27-140 (740)
350 3ju4_A Endo-N-acetylneuraminid 26.7 3.9E+02 0.013 24.8 12.8 124 173-303 269-405 (670)
351 3oyo_A Hemopexin fold protein 26.6 2.7E+02 0.0094 23.0 12.3 105 246-356 62-197 (225)
352 3ju4_A Endo-N-acetylneuraminid 26.1 4E+02 0.014 24.7 12.1 103 243-345 284-405 (670)
353 2ism_A Putative oxidoreductase 24.9 3.6E+02 0.012 23.7 12.9 134 195-343 41-219 (352)
354 3das_A Putative oxidoreductase 23.3 4E+02 0.014 23.7 11.9 105 252-356 42-182 (347)
355 1ck7_A Protein (gelatinase A); 22.4 5.6E+02 0.019 25.1 14.0 62 252-317 548-617 (631)
356 4hvt_A Ritya.17583.B, post-pro 21.8 5.9E+02 0.02 25.2 15.7 148 164-324 269-438 (711)
357 2dae_A KIAA0733 protein; mitog 21.1 45 0.0015 22.2 1.7 17 43-59 21-37 (75)
358 1hxn_A Hemopexin, HPX; heme, b 20.5 3.2E+02 0.011 22.5 7.3 63 290-356 22-89 (219)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.2e-36 Score=275.31 Aligned_cols=248 Identities=16% Similarity=0.282 Sum_probs=212.2
Q ss_pred eEEEeecCCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCC
Q 044903 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
.+|++++. .......+++||+.+++|..++++|.. +.++++++.+++||++||... ....
T Consensus 17 ~i~v~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~--~~~~ 76 (302)
T 2xn4_A 17 LMVVVGGQ---APKAIRSVECYDFKEERWHQVAELPSR---------------RCRAGMVYMAGLVFAVGGFNG--SLRV 76 (302)
T ss_dssp EEEEECCB---SSSBCCCEEEEETTTTEEEEECCCSSC---------------CBSCEEEEETTEEEEESCBCS--SSBC
T ss_pred EEEEECCC---CCCCCCcEEEEcCcCCcEeEcccCCcc---------------cccceEEEECCEEEEEeCcCC--Cccc
Confidence 47888763 122334589999999999999887752 456788889999999999765 3456
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
+++++||+.+++|+++++||.+|..++++.++++|||+||... ....+++++||+.+++ |+.++++|.++.
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~r~-- 147 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDG---STGLSSVEAYNIKSNE----WFHVAPMNTRRS-- 147 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECS---SCEEEEEEEEETTTTE----EEEECCCSSCCB--
T ss_pred cceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCC---CccCceEEEEeCCCCe----EeecCCCCCccc--
Confidence 8899999999999999999999999999999999999999865 3456789999999999 999999997764
Q ss_pred cceeEEEECCEEEEEeeeC-------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC-----CeEEEE
Q 044903 244 EAIDAVGWKGKLCLVNVKG-------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSKY 311 (387)
Q Consensus 244 ~~~~~v~~~g~lyv~gg~~-------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~-----~~v~~y 311 (387)
.+.+++++++||++||.. ..+++||+.+++|+.++. ++..+..+++++.+++||++||.+ .++++|
T Consensus 148 -~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 225 (302)
T 2xn4_A 148 -SVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVY 225 (302)
T ss_dssp -SCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEE
T ss_pred -CceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCC-CccccccccEEEECCEEEEECCCCCCcccceEEEE
Confidence 488899999999999874 579999999999999976 566777888899999999999853 469999
Q ss_pred eCCCCceEEccccccccCceeEEEeCCeEEEEecCC-----ceEEEEEecCCCCCceeEE
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~-----~~i~v~d~~~~~~~~~W~~ 366 (387)
|+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+. .|+.
T Consensus 226 d~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~ 281 (302)
T 2xn4_A 226 DPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD----KWTV 281 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT----EEEE
T ss_pred eCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCC----eEEE
Confidence 999999999998888888888999999999998853 46999999976 8996
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=274.03 Aligned_cols=246 Identities=18% Similarity=0.265 Sum_probs=213.2
Q ss_pred eEEEeecCCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCC
Q 044903 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPAL 163 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~ 163 (387)
.+|.+++. +....+++||+.+++|..++++|.. |.++++++++++||++||.. ....
T Consensus 13 ~l~~~GG~-----~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~---~~~~ 69 (306)
T 3ii7_A 13 YRIALFGG-----SQPQSCRYFNPKDYSWTDIRCPFEK---------------RRDAACVFWDNVVYILGGSQ---LFPI 69 (306)
T ss_dssp EEEEEECC-----SSTTSEEEEETTTTEEEECCCCSCC---------------CBSCEEEEETTEEEEECCBS---SSBC
T ss_pred eEEEEeCC-----CCCceEEEecCCCCCEecCCCCCcc---------------cceeEEEEECCEEEEEeCCC---CCCc
Confidence 47888763 2255699999999999999887762 55688999999999999975 3467
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
+++++||+.+++|++++++|.+|..++++.++++|||+||... .....+.+++||+.+++ |+.++++|.++.
T Consensus 70 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~-- 141 (306)
T 3ii7_A 70 KRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEV--GNSALYLFECYDTRTES----WHTKPSMLTQRC-- 141 (306)
T ss_dssp CEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBT--TBSCCCCEEEEETTTTE----EEEECCCSSCCB--
T ss_pred ceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCC--CCcEeeeEEEEeCCCCc----eEeCCCCcCCcc--
Confidence 8899999999999999999999999999999999999999863 24567899999999999 999999997764
Q ss_pred cceeEEEECCEEEEEeeeC---------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC-----CeEE
Q 044903 244 EAIDAVGWKGKLCLVNVKG---------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLS 309 (387)
Q Consensus 244 ~~~~~v~~~g~lyv~gg~~---------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~-----~~v~ 309 (387)
.+.+++++++||++||.. ..+++||+++++|+.++. ++..+..+++++.+++||++||.. ..++
T Consensus 142 -~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 142 -SHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp -SCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCEETTEEBCCEE
T ss_pred -eeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC-ccchhhcceEEEECCEEEEEeCCCCCCCCceEE
Confidence 488999999999999863 569999999999999986 667777888999999999999843 4699
Q ss_pred EEeCCCCceEEccccccccCceeEEEeCCeEEEEecCC-----ceEEEEEecCCCCCceeEE
Q 044903 310 KYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 310 ~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~-----~~i~v~d~~~~~~~~~W~~ 366 (387)
+||+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+. .|+.
T Consensus 220 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~----~W~~ 277 (306)
T 3ii7_A 220 YYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETD----KWVA 277 (306)
T ss_dssp EEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTT----EEEE
T ss_pred EeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCC----eEEe
Confidence 99999999999998888888888999999999999842 67999999976 8996
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.6e-36 Score=276.06 Aligned_cols=254 Identities=15% Similarity=0.224 Sum_probs=214.5
Q ss_pred eEEEeecCCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccC--CCCC
Q 044903 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH--NFNP 161 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~--~~~~ 161 (387)
.+|++++. .......+++||+.+++|..++++|.. |.++++++.++.||++||... ....
T Consensus 26 ~i~v~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~~~~~~~ 87 (308)
T 1zgk_A 26 LIYTAGGY---FRQSLSYLEAYNPSNGTWLRLADLQVP---------------RSGLAGCVVGGLLYAVGGRNNSPDGNT 87 (308)
T ss_dssp CEEEECCB---SSSBCCCEEEEETTTTEEEECCCCSSC---------------CBSCEEEEETTEEEEECCEEEETTEEE
T ss_pred EEEEEeCc---CCCCcceEEEEcCCCCeEeECCCCCcc---------------cccceEEEECCEEEEECCCcCCCCCCe
Confidence 47888873 123344589999999999999887752 556888889999999999731 1133
Q ss_pred CCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 162 ALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 162 ~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
..+++++||+.+++|+++++||.+|..++++.++++|||+||... ....+.+++||+.+++ |+.++++|.++.
T Consensus 88 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~~~~~~~~~yd~~~~~----W~~~~~~p~~r~ 160 (308)
T 1zgk_A 88 DSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHG---CIHHNSVERYEPERDE----WHLVAPMLTRRI 160 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEET---TEECCCEEEEETTTTE----EEECCCCSSCCB
T ss_pred ecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCC---CcccccEEEECCCCCe----EeECCCCCcccc
Confidence 567899999999999999999999999999999999999999865 3456789999999999 999999997764
Q ss_pred cccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC-----CeEEEE
Q 044903 242 SREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSKY 311 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~-----~~v~~y 311 (387)
.+.+++++++||++||.. ..+++||+.+++|+.++. ++..+..+++++.+++||++||.. .++++|
T Consensus 161 ---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 236 (308)
T 1zgk_A 161 ---GVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITA-MNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERY 236 (308)
T ss_dssp ---SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEE
T ss_pred ---ceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCC-CCCccccceEEEECCEEEEEeCCCCCCccceEEEE
Confidence 488999999999999975 679999999999999986 666777888889999999999853 569999
Q ss_pred eCCCCceEEccccccccCceeEEEeCCeEEEEecCC-----ceEEEEEecCCCCCceeEE--cCCC
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV--DTPL 370 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~-----~~i~v~d~~~~~~~~~W~~--~~~~ 370 (387)
|+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+. .|+. .+|.
T Consensus 237 d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~~~~~p~ 298 (308)
T 1zgk_A 237 DVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD----TWSEVTRMTS 298 (308)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTT----EEEEEEECSS
T ss_pred eCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCC----EEeecCCCCC
Confidence 999999999998888888888999999999998842 57899999976 8996 4543
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=271.70 Aligned_cols=249 Identities=18% Similarity=0.251 Sum_probs=212.3
Q ss_pred eEEEeec-CCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCC
Q 044903 84 SLYALFS-PKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPA 162 (387)
Q Consensus 84 ~l~~~~~-~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~ 162 (387)
.+|++++ .. .......+++||+.+++|..++++|.. +.++++++.+++||++||... ...
T Consensus 16 ~i~~~GG~~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~l~v~GG~~~--~~~ 76 (301)
T 2vpj_A 16 VLLVVGGFGS--QQSPIDVVEKYDPKTQEWSFLPSITRK---------------RRYVASVSLHDRIYVIGGYDG--RSR 76 (301)
T ss_dssp EEEEECCEET--TTEECCCEEEEETTTTEEEECCCCSSC---------------CBSCEEEEETTEEEEECCBCS--SCB
T ss_pred EEEEEeCccC--CCcceeEEEEEcCCCCeEEeCCCCChh---------------hccccEEEECCEEEEEcCCCC--Ccc
Confidence 4777776 31 112334589999999999999987752 456888899999999999764 456
Q ss_pred CCccEEEeCCCCc---eeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 163 LTRPLIFDPICRT---WTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 163 ~~~~~vydp~t~~---W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
.+++++||+.+++ |++++++|.+|..++++.++++|||+||... ....+++++||+.+++ |+.++++|.+
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~---~~~~~~~~~~d~~~~~----W~~~~~~p~~ 149 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDG---SRRHTSMERYDPNIDQ----WSMLGDMQTA 149 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCS---SCBCCEEEEEETTTTE----EEEEEECSSC
T ss_pred CceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCC---CcccceEEEEcCCCCe----EEECCCCCCC
Confidence 7889999999999 9999999999999999999999999999865 3457899999999999 9999999876
Q ss_pred cccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC-----CeEE
Q 044903 240 RFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLS 309 (387)
Q Consensus 240 ~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~-----~~v~ 309 (387)
+. .+.+++++++||++||.. ..+++||+.+++|+.++. ++..+..+++++.+++||++||.+ .+++
T Consensus 150 r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~ 225 (301)
T 2vpj_A 150 RE---GAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVALLNDHIYVVGGFDGTAHLSSVE 225 (301)
T ss_dssp CB---SCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred cc---cceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCC-CCcccccceEEEECCEEEEEeCCCCCcccceEE
Confidence 64 488899999999999975 789999999999999976 566777888899999999999853 4699
Q ss_pred EEeCCCCceEEccccccccCceeEEEeCCeEEEEecCC-----ceEEEEEecCCCCCceeEE
Q 044903 310 KYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 310 ~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~-----~~i~v~d~~~~~~~~~W~~ 366 (387)
+||+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+. .|+.
T Consensus 226 ~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~----~W~~ 283 (301)
T 2vpj_A 226 AYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIID----SWEV 283 (301)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTT----EEEE
T ss_pred EEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCC----eEEE
Confidence 99999999999998888888888999999999998853 57899999976 8996
No 5
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.9e-35 Score=271.05 Aligned_cols=242 Identities=15% Similarity=0.157 Sum_probs=203.0
Q ss_pred eEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccC----CCCCCCCccEEEeCCCCc
Q 044903 100 IHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH----NFNPALTRPLIFDPICRT 175 (387)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~----~~~~~~~~~~vydp~t~~ 175 (387)
..+++|||.+++|.. +++|. | .+|.++++++.+++||++||... ......+++++||+.+++
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~-p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~ 78 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSS-Q------------VPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE 78 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCC-C------------SCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTE
T ss_pred CceEEECCCCCeEec-CCCCC-C------------CCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCe
Confidence 368999999999986 55553 1 12566888889999999999631 112233458999999999
Q ss_pred eeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEE
Q 044903 176 WTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKL 255 (387)
Q Consensus 176 W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~l 255 (387)
|+++++||.+|..++++.++++|||+||..........+++++||+.+++ |+.++++|.++. .+++++++++|
T Consensus 79 W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i 151 (315)
T 4asc_A 79 WLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFK----WGESDPLPYVVY---GHTVLSHMDLV 151 (315)
T ss_dssp EEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTE----EEECCCCSSCCB---SCEEEEETTEE
T ss_pred EEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCc----EeECCCCCCccc---ceeEEEECCEE
Confidence 99999999999999999999999999997532124567899999999999 999999997764 48899999999
Q ss_pred EEEeeeC------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCC-----eEEEEeCCCCceEEcccc
Q 044903 256 CLVNVKG------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSC-----TLSKYDEVMDDWKEVVKS 324 (387)
Q Consensus 256 yv~gg~~------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~-----~v~~yd~~~~~W~~v~~~ 324 (387)
|++||.. .++++||+.+++|+.++. ++.++..+++++.+++||++||..+ .+++||+++++|+.+..+
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAP-MQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCC-CCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC
Confidence 9999983 789999999999999986 6677778888999999999998542 599999999999999988
Q ss_pred ccccCceeEEEeCCeEEEEecCC--------------ceEEEEEecCCCCCceeEEc
Q 044903 325 DLLKGARHAAAGGGRVCAVCENG--------------GGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 325 ~~~~~~~~~~~~~~~l~v~gg~~--------------~~i~v~d~~~~~~~~~W~~~ 367 (387)
|..+..++++.++++|||+||.. ..+++||+.+. .|+..
T Consensus 231 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~ 283 (315)
T 4asc_A 231 PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK----KWEGV 283 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT----EEEEE
T ss_pred CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCC----hhhhh
Confidence 88888888999999999999852 35899999976 89973
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=5.1e-34 Score=264.57 Aligned_cols=241 Identities=13% Similarity=0.178 Sum_probs=199.3
Q ss_pred EEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCC----CCCCCccEEEeCCCCce
Q 044903 101 HLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNF----NPALTRPLIFDPICRTW 176 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~----~~~~~~~~vydp~t~~W 176 (387)
.+++|||.+++|.. ++++.. .+|.+++++..++.||++||..... ....+++++||+.+++|
T Consensus 25 ~~~~yd~~~~~W~~-~~~~~~-------------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 25 AAVAYDPMENECYL-TALAEQ-------------IPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEEETTTTEEEE-EEECTT-------------SCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred ceEEECCCCCceec-ccCCcc-------------CCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 37899999999988 334421 1255678888999999999953211 11234489999999999
Q ss_pred eeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEE
Q 044903 177 TFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLC 256 (387)
Q Consensus 177 ~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~ly 256 (387)
+++++||.+|..+++++++++|||+||.... .....+++++||+.+++ |+.++++|.++. .+++++++++||
T Consensus 91 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iy 162 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEVDDKIYVVAGKDLQ-TEASLDSVLCYDPVAAK----WSEVKNLPIKVY---GHNVISHNGMIY 162 (318)
T ss_dssp EECSCBSSCBCSCEEEEETTEEEEEEEEBTT-TCCEEEEEEEEETTTTE----EEEECCCSSCEE---SCEEEEETTEEE
T ss_pred EECCCCCccccccceEEECCEEEEEcCccCC-CCcccceEEEEeCCCCC----EeECCCCCCccc---ccEEEEECCEEE
Confidence 9999999999999999999999999998531 13457789999999999 999999997764 488899999999
Q ss_pred EEeeeC------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceEEccccc
Q 044903 257 LVNVKG------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS-----CTLSKYDEVMDDWKEVVKSD 325 (387)
Q Consensus 257 v~gg~~------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~-----~~v~~yd~~~~~W~~v~~~~ 325 (387)
++||.. .++++||+.+++|+.++. ++..+..+++++.+++||++||.. ..+++||+++++|+.+..+|
T Consensus 163 v~GG~~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 163 CLGGKTDDKKCTNRVFIYNPKKGDWKDLAP-MKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp EECCEESSSCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCS
T ss_pred EEcCCCCCCCccceEEEEcCCCCEEEECCC-CCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCC
Confidence 999973 679999999999999986 566677788889999999999743 35899999999999999888
Q ss_pred cccCceeEEEeCCeEEEEecCC--------------ceEEEEEecCCCCCceeEEcC
Q 044903 326 LLKGARHAAAGGGRVCAVCENG--------------GGIVVVDVKAAAAPTIFVVDT 368 (387)
Q Consensus 326 ~~~~~~~~~~~~~~l~v~gg~~--------------~~i~v~d~~~~~~~~~W~~~~ 368 (387)
..+..++++.++++|||+||.+ ..+++||+.+. .|+..+
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~----~W~~~~ 294 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK----EWAGML 294 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT----EEEEEE
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC----Eehhhc
Confidence 8888888999999999998842 46899999976 899743
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=258.42 Aligned_cols=218 Identities=17% Similarity=0.236 Sum_probs=186.9
Q ss_pred EEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccC-CCCCCCCccEEEeCCCCceeeC
Q 044903 101 HLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTH-NFNPALTRPLIFDPICRTWTFG 179 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~-~~~~~~~~~~vydp~t~~W~~l 179 (387)
.+++||+.+++|..++++|.. |.++++++++++||++||... ......+++++||+.+++|+++
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~ 132 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSP---------------RCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGES 132 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSC---------------EESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEEC
T ss_pred ceEEecCCCCeEEECCCCCcc---------------hhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeEC
Confidence 389999999999999988752 556888999999999999753 2245678899999999999999
Q ss_pred CCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEe
Q 044903 180 PELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVN 259 (387)
Q Consensus 180 ~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~g 259 (387)
+++|.+|..++++.++++|||+||... .....+++++||+.+++ |+.++++|.++. .+.+++++++||++|
T Consensus 133 ~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~G 203 (315)
T 4asc_A 133 DPLPYVVYGHTVLSHMDLVYVIGGKGS--DRKCLNKMCVYDPKKFE----WKELAPMQTARS---LFGATVHDGRIIVAA 203 (315)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCBCT--TSCBCCCEEEEETTTTE----EEECCCCSSCCB---SCEEEEETTEEEEEE
T ss_pred CCCCCcccceeEEEECCEEEEEeCCCC--CCcccceEEEEeCCCCe----EEECCCCCCchh---ceEEEEECCEEEEEe
Confidence 999999999999999999999999854 24567899999999999 999999997764 488999999999999
Q ss_pred eeC-----CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC--------------CeEEEEeCCCCceEE
Q 044903 260 VKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS--------------CTLSKYDEVMDDWKE 320 (387)
Q Consensus 260 g~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~--------------~~v~~yd~~~~~W~~ 320 (387)
|.. ..+++||+++++|+.++. ++..+..+++++.+++||++||.. .++++||+++++|+.
T Consensus 204 G~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 204 GVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp EECSSSEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred ccCCCCccceEEEEECCCCeEEECCC-CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 986 579999999999999986 667777888889999999999742 248999999999999
Q ss_pred ccccccccCceeEEEeCCeEEEEec
Q 044903 321 VVKSDLLKGARHAAAGGGRVCAVCE 345 (387)
Q Consensus 321 v~~~~~~~~~~~~~~~~~~l~v~gg 345 (387)
+ ++..+..++++.++++||++..
T Consensus 283 ~--~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 283 V--LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp E--ESCSSCCSSCEEEEEEECGGGS
T ss_pred h--ccCCcCccceEEeCCEEEEEEe
Confidence 9 3444555778889999999843
No 8
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=6.9e-33 Score=256.94 Aligned_cols=234 Identities=20% Similarity=0.298 Sum_probs=193.1
Q ss_pred eEEEeecCCCC---C-CCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCC
Q 044903 84 SLYALFSPKSN---S-SSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNF 159 (387)
Q Consensus 84 ~l~~~~~~~~~---~-~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~ 159 (387)
.+|++++.... . ......+++||+.+++|..++++|.. |.++++++++++||++||.....
T Consensus 58 ~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---------------r~~~~~~~~~~~iyv~GG~~~~~ 122 (318)
T 2woz_A 58 QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA---------------RCLFGLGEVDDKIYVVAGKDLQT 122 (318)
T ss_dssp CEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC---------------BCSCEEEEETTEEEEEEEEBTTT
T ss_pred EEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc---------------ccccceEEECCEEEEEcCccCCC
Confidence 58888873100 0 01122489999999999999888762 55688899999999999976433
Q ss_pred CCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 160 NPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 160 ~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
....+++++||+.+++|++++++|.+|..++++..+++|||+||... .....+++++||+.+++ |+.++++|.+
T Consensus 123 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~~~~----W~~~~~~p~~ 196 (318)
T 2woz_A 123 EASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTD--DKKCTNRVFIYNPKKGD----WKDLAPMKTP 196 (318)
T ss_dssp CCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEES--SSCBCCCEEEEETTTTE----EEEECCCSSC
T ss_pred CcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCC--CCCccceEEEEcCCCCE----EEECCCCCCC
Confidence 45668899999999999999999999999999999999999999854 23457899999999999 9999999977
Q ss_pred cccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC---------
Q 044903 240 RFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS--------- 305 (387)
Q Consensus 240 ~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~--------- 305 (387)
+. .+.+++++++||++||.. ..+++||+++++|+.++. ++..+..+++++.+++||++||..
T Consensus 197 r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~ 272 (318)
T 2woz_A 197 RS---MFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTE-FPQERSSISLVSLAGSLYAIGGFAMIQLESKEF 272 (318)
T ss_dssp CB---SCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCC-CSSCCBSCEEEEETTEEEEECCBCCBC----CC
T ss_pred cc---cceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCC-CCCcccceEEEEECCEEEEECCeeccCCCCcee
Confidence 64 488899999999999975 678999999999999986 566677888899999999999742
Q ss_pred -----CeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEe
Q 044903 306 -----CTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 306 -----~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~g 344 (387)
.++++||+++++|+++ ++..+..++++.++++|||+.
T Consensus 273 ~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~iyi~~ 314 (318)
T 2woz_A 273 APTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLATRLNLFK 314 (318)
T ss_dssp BCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEEEEEGGG
T ss_pred ccceeeeEEEEeCCCCEehhh--cccccccccceeeCCEEEEEE
Confidence 4699999999999998 555566677888999999873
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.5e-32 Score=258.67 Aligned_cols=255 Identities=13% Similarity=0.159 Sum_probs=198.2
Q ss_pred eEEEeecCCCCCCCCCeEEEEEeCC--CCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCc-c--CC
Q 044903 84 SLYALFSPKSNSSSTPIHLFTFDPV--SSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAAT-T--HN 158 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~--~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~-~--~~ 158 (387)
.+|++++. ....+++||+. +++|..++++|..| |.++++++++++||++||. . ..
T Consensus 21 ~iyv~GG~------~~~~~~~~d~~~~~~~W~~~~~~p~~~--------------R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 21 TVYIGLGS------AGTAWYKLDTQAKDKKWTALAAFPGGP--------------RDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp EEEEECGG------GTTCEEEEETTSSSCCEEECCCCTTCC--------------CBSCEEEEETTEEEEECCEEECTTS
T ss_pred EEEEEeCc------CCCeEEEEccccCCCCeeECCCCCCCc--------------CccceEEEECCEEEEEcCCCCCCCc
Confidence 47888763 12368999997 48999999988311 5668899999999999997 3 11
Q ss_pred CCCCCCccEEEeCCCCceeeCCCCC-CCceeeeEEeeCCEEEEEecCCCCC-----------------------------
Q 044903 159 FNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGYSRGAVYVASGIGSQF----------------------------- 208 (387)
Q Consensus 159 ~~~~~~~~~vydp~t~~W~~l~~~~-~~r~~~~~~~~~~~iyv~GG~~~~~----------------------------- 208 (387)
.....+++++||+.+++|+++++|+ .+|..+++++.+++|||+||.....
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 2345788999999999999999998 8999998888999999999975310
Q ss_pred --CCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC------CeEEEEEC--CCCceeec
Q 044903 209 --SSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG------AEGAVYDV--VANTWDDM 278 (387)
Q Consensus 209 --~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~------~~i~~yD~--~~~~W~~~ 278 (387)
.....+.+++||+.+++ |+.++++|.++ +..+++++++++||++||.. ..+++||+ ++++|+.+
T Consensus 161 ~~~~~~~~~v~~yd~~~~~----W~~~~~~p~~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQ----WSYAGESPWYG--TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp GGGGCCCCEEEEEETTTTE----EEEEEECSSCC--CBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEEC
T ss_pred ccccCCcccEEEEeCCCCc----EEECCCCCCCC--cccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec
Confidence 00235799999999999 99999888654 22378889999999999863 67888986 89999999
Q ss_pred cccc-cCCCCCcEEEEeCCeEEEEeCCC----------------------CeEEEEeCCCCceEEccccccccCceeEEE
Q 044903 279 REGM-VRGWRGPVAAMDEEVLYGIDENS----------------------CTLSKYDEVMDDWKEVVKSDLLKGARHAAA 335 (387)
Q Consensus 279 ~~~~-~~~~~~~~~~~~~g~ly~~g~~~----------------------~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~ 335 (387)
+... +..+.++++++.+++||++||.. ..+++||+++++|+.+..+|..+..++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 314 (357)
T 2uvk_A 235 APVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP 314 (357)
T ss_dssp CCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE
T ss_pred CCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE
Confidence 7632 33344677888999999999832 258999999999999998888888888899
Q ss_pred eCCeEEEEecCC------ceEEEEEecCCCCCceeEEcC
Q 044903 336 GGGRVCAVCENG------GGIVVVDVKAAAAPTIFVVDT 368 (387)
Q Consensus 336 ~~~~l~v~gg~~------~~i~v~d~~~~~~~~~W~~~~ 368 (387)
++++|||+||.+ ..+++++.+++ .|....
T Consensus 315 ~~~~i~v~GG~~~~~~~~~~v~~l~~~~~----~~~~~~ 349 (357)
T 2uvk_A 315 WNNSLLIIGGETAGGKAVTDSVLITVKDN----KVTVQN 349 (357)
T ss_dssp ETTEEEEEEEECGGGCEEEEEEEEEC-CC----SCEEEC
T ss_pred eCCEEEEEeeeCCCCCEeeeEEEEEEcCc----EeEeee
Confidence 999999999842 46788899876 787633
No 10
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=5.2e-32 Score=249.55 Aligned_cols=249 Identities=17% Similarity=0.185 Sum_probs=200.2
Q ss_pred hHHHhhHhhhhhccCCCCCCc-------ceEEEeecCCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCcc
Q 044903 62 ILHNVCHSWRRLIYSPSFPPF-------LSLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFL 134 (387)
Q Consensus 62 ~~r~Vck~W~~li~s~~f~~~-------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~ 134 (387)
++....++|..+...|.-+.. -.+|++++. .......+++||+.+++|..++++|..
T Consensus 28 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~---~~~~~~~~~~~d~~~~~W~~~~~~p~~------------- 91 (306)
T 3ii7_A 28 YFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGS---QLFPIKRMDCYNVVKDSWYSKLGPPTP------------- 91 (306)
T ss_dssp EEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCB---SSSBCCEEEEEETTTTEEEEEECCSSC-------------
T ss_pred EecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCC---CCCCcceEEEEeCCCCeEEECCCCCcc-------------
Confidence 334455678877554432211 258888874 223345699999999999999887752
Q ss_pred ccccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCC-CCCC
Q 044903 135 SRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFS-SDVA 213 (387)
Q Consensus 135 ~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~-~~~~ 213 (387)
+.++++++++++||++||.+.. ....+++++||+.+++|+++++||.+|..++++.++++|||+||...... ....
T Consensus 92 --r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 92 --RDSLAACAAEGKIYTSGGSEVG-NSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp --CBSCEEEEETTEEEEECCBBTT-BSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEEC
T ss_pred --ccceeEEEECCEEEEECCCCCC-CcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccccc
Confidence 5568888999999999997622 45678899999999999999999999999999999999999999854210 1127
Q ss_pred ceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCC
Q 044903 214 KSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRG 288 (387)
Q Consensus 214 ~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~ 288 (387)
+.+++||+.+++ |+.++++|.++. .+.+++++++||++||.. ..+++||+++++|+.++. ++..+..
T Consensus 169 ~~~~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~ 240 (306)
T 3ii7_A 169 NSCEVYDPATET----WTELCPMIEARK---NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSP-MPWKGVT 240 (306)
T ss_dssp CCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCC-CSCCBSC
T ss_pred ceEEEeCCCCCe----EEECCCccchhh---cceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCC-CCCCccc
Confidence 899999999999 999999997764 488999999999999975 689999999999999976 6667778
Q ss_pred cEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceEEccccccccCceeEEEeC
Q 044903 289 PVAAMDEEVLYGIDENS-----CTLSKYDEVMDDWKEVVKSDLLKGARHAAAGG 337 (387)
Q Consensus 289 ~~~~~~~g~ly~~g~~~-----~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~ 337 (387)
+++++.+++||++||.+ .++++||+++++|+.+..+|..+..++++.+.
T Consensus 241 ~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 241 VKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPVTSCLICVV 294 (306)
T ss_dssp CEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSCTTCEEEEE
T ss_pred eeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccceeEEEEEC
Confidence 88888999999999843 57999999999999999888777666555543
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=5.2e-32 Score=249.04 Aligned_cols=249 Identities=17% Similarity=0.237 Sum_probs=199.3
Q ss_pred HHhhHhhhhhccCCCCCCc-------ceEEEeecCCCCCCCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCcccc
Q 044903 64 HNVCHSWRRLIYSPSFPPF-------LSLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSR 136 (387)
Q Consensus 64 r~Vck~W~~li~s~~f~~~-------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~ 136 (387)
....++|..+..-|.-+.. -.+|++++.. .......+++||+.+++|..++++|..
T Consensus 36 d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~p~~--------------- 98 (302)
T 2xn4_A 36 DFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFN--GSLRVRTVDSYDPVKDQWTSVANMRDR--------------- 98 (302)
T ss_dssp ETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBC--SSSBCCCEEEEETTTTEEEEECCCSSC---------------
T ss_pred cCcCCcEeEcccCCcccccceEEEECCEEEEEeCcC--CCccccceEEECCCCCceeeCCCCCcc---------------
Confidence 3445577776444432111 2588887631 112234589999999999999987762
Q ss_pred ccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceE
Q 044903 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
|.++++++++++||++||... ....+++++||+.+++|+++++||.+|..++++.++++|||+||.... .....+.+
T Consensus 99 r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~ 175 (302)
T 2xn4_A 99 RSTLGAAVLNGLLYAVGGFDG--STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVA-SRQCLSTV 175 (302)
T ss_dssp CBSCEEEEETTEEEEEEEECS--SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETT-TTEECCCE
T ss_pred ccceEEEEECCEEEEEcCCCC--CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCC-CCccccEE
Confidence 556888899999999999764 345678999999999999999999999999999999999999998542 11346789
Q ss_pred EEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCCcEE
Q 044903 217 EKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 217 ~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
++||+.+++ |+.++++|.++. .+.+++++++||++||.. ..+++||+++++|+.++. ++..+..+++
T Consensus 176 ~~yd~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~r~~~~~ 247 (302)
T 2xn4_A 176 ECYNATTNE----WTYIAEMSTRRS---GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVAD-MNMCRRNAGV 247 (302)
T ss_dssp EEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECC-CSSCCBSCEE
T ss_pred EEEeCCCCc----EEECCCCccccc---cccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCC-CCCccccCeE
Confidence 999999999 999999997664 488999999999999975 689999999999999986 5666677888
Q ss_pred EEeCCeEEEEeCCC-----CeEEEEeCCCCceEEcc-ccccccCceeEEEeCCeE
Q 044903 292 AMDEEVLYGIDENS-----CTLSKYDEVMDDWKEVV-KSDLLKGARHAAAGGGRV 340 (387)
Q Consensus 292 ~~~~g~ly~~g~~~-----~~v~~yd~~~~~W~~v~-~~~~~~~~~~~~~~~~~l 340 (387)
++.+++||++||.+ .++++||+++++|+.+. .++..+..++++.++++|
T Consensus 248 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 248 CAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCCBSCEEEEEEC--
T ss_pred EEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcccccceEEEecccC
Confidence 88999999999854 35999999999999997 677777778888888765
No 12
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=4e-31 Score=243.97 Aligned_cols=215 Identities=13% Similarity=0.195 Sum_probs=182.1
Q ss_pred ccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCC-CCCCCCce
Q 044903 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQ-FSSDVAKS 215 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~-~~~~~~~~ 215 (387)
+.++.++..++.||++||. . ....+++++||+.+++|++++++|.+|..++++.++++|||+||.... ......+.
T Consensus 15 ~~~~~~~~~~~~i~v~GG~-~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 91 (308)
T 1zgk_A 15 PRGSHAPKVGRLIYTAGGY-F--RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSA 91 (308)
T ss_dssp ------CCCCCCEEEECCB-S--SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCC
T ss_pred eCCccccCCCCEEEEEeCc-C--CCCcceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecce
Confidence 5567888899999999997 2 356788999999999999999999999999999999999999998310 01345678
Q ss_pred EEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCCCCCcE
Q 044903 216 VEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRGWRGPV 290 (387)
Q Consensus 216 v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~~~~~~ 290 (387)
+++||+.+++ |+.++++|.++. .+.+++++++||++||.. ..+++||+.+++|+.++. ++..+..++
T Consensus 92 ~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~ 163 (308)
T 1zgk_A 92 LDCYNPMTNQ----WSPCAPMSVPRN---RIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP-MLTRRIGVG 163 (308)
T ss_dssp EEEEETTTTE----EEECCCCSSCCB---TCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC-CSSCCBSCE
T ss_pred EEEECCCCCe----EeECCCCCcCcc---ccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC-CCccccceE
Confidence 9999999999 999999997764 488999999999999965 689999999999999986 566777888
Q ss_pred EEEeCCeEEEEeCCC-----CeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCC-----ceEEEEEecCCCC
Q 044903 291 AAMDEEVLYGIDENS-----CTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG-----GGIVVVDVKAAAA 360 (387)
Q Consensus 291 ~~~~~g~ly~~g~~~-----~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~-----~~i~v~d~~~~~~ 360 (387)
+++.+++||++||.. .++++||+++++|+.+..+|..+..++++.++++|||+||.+ ..+++||+.+.
T Consensus 164 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-- 241 (308)
T 1zgk_A 164 VAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE-- 241 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT--
T ss_pred EEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC--
Confidence 889999999999843 469999999999999998888888888899999999998853 67999999976
Q ss_pred CceeEE
Q 044903 361 PTIFVV 366 (387)
Q Consensus 361 ~~~W~~ 366 (387)
.|+.
T Consensus 242 --~W~~ 245 (308)
T 1zgk_A 242 --TWTF 245 (308)
T ss_dssp --EEEE
T ss_pred --cEEE
Confidence 8997
No 13
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.6e-31 Score=243.28 Aligned_cols=246 Identities=15% Similarity=0.230 Sum_probs=199.8
Q ss_pred hhHHHhhHhhhhhccCCCCCCc-------ceEEEeecCCCCCCCCCeEEEEEeCCCCC---cccCCCCCCCCCccccccC
Q 044903 61 SILHNVCHSWRRLIYSPSFPPF-------LSLYALFSPKSNSSSTPIHLFTFDPVSST---WDPLPPPPPDPPLHLILHH 130 (387)
Q Consensus 61 ~~~r~Vck~W~~li~s~~f~~~-------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~---W~~l~~~~~~p~~~~~~~~ 130 (387)
..+....++|..+...|.-+.. -.+|++++.. .......+++||+.+++ |..++++|..
T Consensus 34 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~--~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~--------- 102 (301)
T 2vpj_A 34 EKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYD--GRSRLSSVECLDYTADEDGVWYSVAPMNVR--------- 102 (301)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBC--SSCBCCCEEEEETTCCTTCCCEEECCCSSC---------
T ss_pred EEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCC--CCccCceEEEEECCCCCCCeeEECCCCCCC---------
Confidence 3444556778877654432211 2578887631 11223458999999999 9999887762
Q ss_pred CCccccccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCC
Q 044903 131 PSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSS 210 (387)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~ 210 (387)
+.++.+++.+++||++||... ....+++++||+.+++|++++++|.+|..++++.++++||++||... .
T Consensus 103 ------r~~~~~~~~~~~lyv~GG~~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~---~ 171 (301)
T 2vpj_A 103 ------RGLAGATTLGDMIYVSGGFDG--SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDG---L 171 (301)
T ss_dssp ------CBSCEEEEETTEEEEECCBCS--SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCS---S
T ss_pred ------ccceeEEEECCEEEEEcccCC--CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCC---C
Confidence 556888889999999999764 34578899999999999999999999999999999999999999865 2
Q ss_pred CCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCceeeccccccCC
Q 044903 211 DVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANTWDDMREGMVRG 285 (387)
Q Consensus 211 ~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~W~~~~~~~~~~ 285 (387)
...+.+++||+.+++ |+.++++|.++. .+.+++++++||++||.. ..+++||+++++|+.++. ++..
T Consensus 172 ~~~~~~~~~d~~~~~----W~~~~~~p~~r~---~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~ 243 (301)
T 2vpj_A 172 NILNSVEKYDPHTGH----WTNVTPMATKRS---GAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS-MTTP 243 (301)
T ss_dssp CBCCCEEEEETTTTE----EEEECCCSSCCB---SCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC-CSSC
T ss_pred cccceEEEEeCCCCc----EEeCCCCCcccc---cceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC-CCCc
Confidence 467899999999999 999999987764 488999999999999975 689999999999999986 5666
Q ss_pred CCCcEEEEeCCeEEEEeCCC-----CeEEEEeCCCCceEEccccccccCceeEEEe
Q 044903 286 WRGPVAAMDEEVLYGIDENS-----CTLSKYDEVMDDWKEVVKSDLLKGARHAAAG 336 (387)
Q Consensus 286 ~~~~~~~~~~g~ly~~g~~~-----~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~ 336 (387)
+..+++++.+++||++||.+ ..+++||+++++|+.+..+|..+..++++.+
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 299 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVL 299 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCcccccceEEEe
Confidence 67788888999999999854 3699999999999999988887777766654
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.97 E-value=5.9e-30 Score=240.94 Aligned_cols=218 Identities=14% Similarity=0.123 Sum_probs=172.2
Q ss_pred ccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCC--CCceeeCCCCC-CCceeeeEEeeCCEEEEEecCCC--CCCCC
Q 044903 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPI--CRTWTFGPELV-TPRRWCAAGYSRGAVYVASGIGS--QFSSD 211 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~--t~~W~~l~~~~-~~r~~~~~~~~~~~iyv~GG~~~--~~~~~ 211 (387)
+.++.+++++++||++||... +++++||+. +++|+++++|| .+|..+++++++++|||+||... .....
T Consensus 10 r~~~~~~~~~~~iyv~GG~~~------~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~ 83 (357)
T 2uvk_A 10 FKSGTGAIDNDTVYIGLGSAG------TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQ 83 (357)
T ss_dssp CCSCEEEEETTEEEEECGGGT------TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEE
T ss_pred ccceEEEEECCEEEEEeCcCC------CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccce
Confidence 445777788999999999753 479999998 49999999999 89999999999999999999822 11124
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCC-CCcccccceeEEEECCEEEEEeeeC----------------------------
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELK-DGRFSREAIDAVGWKGKLCLVNVKG---------------------------- 262 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~-~~~~~~~~~~~v~~~g~lyv~gg~~---------------------------- 262 (387)
..+++++||+.+++ |+.+++|+ .++ ..+++++++++||++||..
T Consensus 84 ~~~~v~~yd~~~~~----W~~~~~~~p~~r---~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (357)
T 2uvk_A 84 VFNDVHKYNPKTNS----WVKLMSHAPMGM---AGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHY 156 (357)
T ss_dssp ECCCEEEEETTTTE----EEECSCCCSSCC---SSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred eeccEEEEeCCCCc----EEECCCCCCccc---ccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhh
Confidence 57899999999999 99999988 444 4488888999999999964
Q ss_pred -----------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCC------CCeEEEEeC--CCCceEEccc
Q 044903 263 -----------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDEN------SCTLSKYDE--VMDDWKEVVK 323 (387)
Q Consensus 263 -----------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~------~~~v~~yd~--~~~~W~~v~~ 323 (387)
..+++||+.+++|+.++..+...+.++++++.+++||++||. ...+++||+ ++++|+.+..
T Consensus 157 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~ 236 (357)
T 2uvk_A 157 FDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAP 236 (357)
T ss_dssp HSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCC
T ss_pred ccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCC
Confidence 489999999999999976332334458888899999999974 346888976 9999999987
Q ss_pred ccccc--CceeEEEeCCeEEEEecCC----------------------ceEEEEEecCCCCCceeEE--cCCCC
Q 044903 324 SDLLK--GARHAAAGGGRVCAVCENG----------------------GGIVVVDVKAAAAPTIFVV--DTPLG 371 (387)
Q Consensus 324 ~~~~~--~~~~~~~~~~~l~v~gg~~----------------------~~i~v~d~~~~~~~~~W~~--~~~~~ 371 (387)
++..+ ..++++..+++|||+||.+ ..+++||+.+. .|+. .+|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~----~W~~~~~~p~~ 306 (357)
T 2uvk_A 237 VSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG----KWDKSGELSQG 306 (357)
T ss_dssp SSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC-------CEEEEECSSC
T ss_pred CCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC----ceeeCCCCCCC
Confidence 75544 3566889999999998832 35899999976 8996 44433
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=1.3e-28 Score=250.80 Aligned_cols=236 Identities=9% Similarity=0.094 Sum_probs=182.9
Q ss_pred eEEEeecCCCCCCCCCeEEEEEeCCCCCcccCC-CCCCCCCccccccCCCccccccceeEEEe--CCEEEEEcCccCCCC
Q 044903 84 SLYALFSPKSNSSSTPIHLFTFDPVSSTWDPLP-PPPPDPPLHLILHHPSFLSRNLPVQLVSL--SGKLILLAATTHNFN 160 (387)
Q Consensus 84 ~l~~~~~~~~~~~~~~~~~~~~d~~~~~W~~l~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~~ 160 (387)
.+|++++.. ......+++||+.+++|..++ ++|... . -.+|.+|+++++ +++||++||.... .
T Consensus 399 ~iyv~GG~~---~~~~~~v~~yd~~~~~W~~~~~~~p~~~-~---------p~~R~~hs~~~~~~~~~lyv~GG~~~~-~ 464 (695)
T 2zwa_A 399 DVFYMGGSN---PYRVNEILQLSIHYDKIDMKNIEVSSSE-V---------PVARMCHTFTTISRNNQLLLIGGRKAP-H 464 (695)
T ss_dssp CEEEECCBS---SSBCCCEEEEEECSSCEEEEECCCCCSC-C---------CCCCBSCEEEEETTTTEEEEECCBSST-T
T ss_pred EEEEECCCC---CCCcCcEEEEECCCCeEEEeccCCCCCC-C---------CccccceEEEEEccCCEEEEEcCCCCC-C
Confidence 478887631 123345899999999999988 643100 0 112667899999 9999999997652 2
Q ss_pred CCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCC---C
Q 044903 161 PALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE---L 236 (387)
Q Consensus 161 ~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~---~ 236 (387)
...+++++||+.+++|+++++||.+|..|+++++ +++|||+||.... . .+++||+.+++ |+.+++ +
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~---~---~v~~yd~~t~~----W~~~~~~g~~ 534 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEG---P---AMLLYNVTEEI----FKDVTPKDEF 534 (695)
T ss_dssp CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSS---C---SEEEEETTTTE----EEECCCSSGG
T ss_pred CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCC---C---CEEEEECCCCc----eEEccCCCCC
Confidence 3578899999999999999999999999999996 9999999998652 1 89999999999 999987 6
Q ss_pred CCCcccccceeEEEEC---CEEEEEeeeC-------CeEEEEECCCCc------eeeccccccCCCCCcEEEEeC-CeEE
Q 044903 237 KDGRFSREAIDAVGWK---GKLCLVNVKG-------AEGAVYDVVANT------WDDMREGMVRGWRGPVAAMDE-EVLY 299 (387)
Q Consensus 237 ~~~~~~~~~~~~v~~~---g~lyv~gg~~-------~~i~~yD~~~~~------W~~~~~~~~~~~~~~~~~~~~-g~ly 299 (387)
|.++ ..+++++++ ++||++||.. .++++||+.+++ |+.+...++.++.++++++.+ ++||
T Consensus 535 p~~r---~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iy 611 (695)
T 2zwa_A 535 FQNS---LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLL 611 (695)
T ss_dssp GGSC---CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEE
T ss_pred CCcc---cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEE
Confidence 6555 447777777 9999999973 679999999999 888876334566678888888 9999
Q ss_pred EEeCC--------CCeEEEEeCCCCceEEcccc-------ccccCceeEEEeCC-eEEEEecC
Q 044903 300 GIDEN--------SCTLSKYDEVMDDWKEVVKS-------DLLKGARHAAAGGG-RVCAVCEN 346 (387)
Q Consensus 300 ~~g~~--------~~~v~~yd~~~~~W~~v~~~-------~~~~~~~~~~~~~~-~l~v~gg~ 346 (387)
++||. ...+++||+++++|+.+..+ ++....++++.+++ +|||+||+
T Consensus 612 v~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg 674 (695)
T 2zwa_A 612 IVGGTSPSGLFDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGG 674 (695)
T ss_dssp EECCBCSSCCCCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCE
T ss_pred EECCccCCCCCCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCC
Confidence 99983 34699999999999976422 12233466666665 99999885
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.96 E-value=1.7e-27 Score=242.59 Aligned_cols=213 Identities=9% Similarity=0.055 Sum_probs=176.4
Q ss_pred ccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCC-C-----CCCCceeeeEEee--CCEEEEEecCCCCC
Q 044903 137 NLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP-E-----LVTPRRWCAAGYS--RGAVYVASGIGSQF 208 (387)
Q Consensus 137 ~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~-~-----~~~~r~~~~~~~~--~~~iyv~GG~~~~~ 208 (387)
++++. ++.++.||++||... ...+++++||+.+++|+.++ + ||.+|..|+++++ +++|||+||....
T Consensus 389 r~g~~-~~~~~~iyv~GG~~~---~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~- 463 (695)
T 2zwa_A 389 KFGDV-DVAGNDVFYMGGSNP---YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAP- 463 (695)
T ss_dssp BSCEE-EECSSCEEEECCBSS---SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSST-
T ss_pred ceeEE-EEECCEEEEECCCCC---CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCC-
Confidence 45543 448999999999754 45688999999999999988 5 7899999999999 9999999998652
Q ss_pred CCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE-CCEEEEEeeeC--CeEEEEECCCCceeeccc--ccc
Q 044903 209 SSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW-KGKLCLVNVKG--AEGAVYDVVANTWDDMRE--GMV 283 (387)
Q Consensus 209 ~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~-~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~--~~~ 283 (387)
....+++++||+.+++ |+.++++|.++.. |+++++ +|+||++||.. ..+++||+.+++|+.++. .++
T Consensus 464 -~~~~~dv~~yd~~t~~----W~~~~~~p~~R~~---h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p 535 (695)
T 2zwa_A 464 -HQGLSDNWIFDMKTRE----WSMIKSLSHTRFR---HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF 535 (695)
T ss_dssp -TCBCCCCEEEETTTTE----EEECCCCSBCCBS---CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG
T ss_pred -CCccccEEEEeCCCCc----EEECCCCCCCccc---ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC
Confidence 3357889999999999 9999999977654 888886 99999999986 379999999999999975 255
Q ss_pred CCCCCcEEEEeC---CeEEEEeCC-------CCeEEEEeCCCCc------eEEcccc-ccccCceeEEEeC-CeEEEEec
Q 044903 284 RGWRGPVAAMDE---EVLYGIDEN-------SCTLSKYDEVMDD------WKEVVKS-DLLKGARHAAAGG-GRVCAVCE 345 (387)
Q Consensus 284 ~~~~~~~~~~~~---g~ly~~g~~-------~~~v~~yd~~~~~------W~~v~~~-~~~~~~~~~~~~~-~~l~v~gg 345 (387)
..+.++++++++ ++||++||. ..++++||+++++ |+.+..+ +..+..++++.++ ++|||+||
T Consensus 536 ~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 536 QNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp GSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred CcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 566667766655 889999985 2469999999999 8988775 3556677888888 99999998
Q ss_pred C--------CceEEEEEecCCCCCceeEE
Q 044903 346 N--------GGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 346 ~--------~~~i~v~d~~~~~~~~~W~~ 366 (387)
. ...+++||+.+. .|+.
T Consensus 616 ~~~~~~~~~~~~v~~yd~~t~----~W~~ 640 (695)
T 2zwa_A 616 TSPSGLFDRTNSIISLDPLSE----TLTS 640 (695)
T ss_dssp BCSSCCCCTTTSEEEEETTTT----EEEE
T ss_pred ccCCCCCCCCCeEEEEECCCC----eEEE
Confidence 4 256999999976 8985
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=8e-26 Score=229.52 Aligned_cols=256 Identities=13% Similarity=0.118 Sum_probs=188.4
Q ss_pred hhHhhhhhccCCCCCCc-------ceEEEeecCCCCC----CCCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCcc
Q 044903 66 VCHSWRRLIYSPSFPPF-------LSLYALFSPKSNS----SSTPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFL 134 (387)
Q Consensus 66 Vck~W~~li~s~~f~~~-------~~l~~~~~~~~~~----~~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~ 134 (387)
...+|..+...|..... -.+|++++..... ......+++||+.+++|..++.++....
T Consensus 174 ~~~~W~~~~~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~----------- 242 (656)
T 1k3i_A 174 GLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHD----------- 242 (656)
T ss_dssp TSCEEEEEEECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCC-----------
T ss_pred CCCeeeeeccCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCC-----------
Confidence 34578777766653211 1477777532110 1122358999999999999987765210
Q ss_pred ccccceeEE-EeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCC
Q 044903 135 SRNLPVQLV-SLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDV 212 (387)
Q Consensus 135 ~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~ 212 (387)
.+.++++ ..+++||++||... .++++|||.+++|+++++|+.+|.+++++++ +++|||+||... ....
T Consensus 243 --~~~~~~~~~~~g~lyv~GG~~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~--~~~~ 312 (656)
T 1k3i_A 243 --MFCPGISMDGNGQIVVTGGNDA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS--GGVF 312 (656)
T ss_dssp --CSSCEEEECTTSCEEEECSSST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC--SSSC
T ss_pred --CccccccCCCCCCEEEeCCCCC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc--CCcc
Confidence 1112333 36899999999643 3799999999999999999999999999998 999999999543 1346
Q ss_pred CceEEEEeCCCCccccCeEEcC-----CCCCCcc----------------------------------------------
Q 044903 213 AKSVEKWDLMNGEKNSRWEKTG-----ELKDGRF---------------------------------------------- 241 (387)
Q Consensus 213 ~~~v~vyd~~t~~~~~~W~~~~-----~~~~~~~---------------------------------------------- 241 (387)
.+++|+||+.+++ |+.++ +|+..+.
T Consensus 313 ~~~~e~yd~~t~~----W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~ 388 (656)
T 1k3i_A 313 EKNGEVYSPSSKT----WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKR 388 (656)
T ss_dssp CCCEEEEETTTTE----EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEEC
T ss_pred cccceEeCCCCCc----ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcc
Confidence 7889999999999 99973 3433210
Q ss_pred --------cccceeEEE---ECCEEEEEeeeC--------C---eEEEEECCCCceeecc-ccccCCCCCcEEEEe-CCe
Q 044903 242 --------SREAIDAVG---WKGKLCLVNVKG--------A---EGAVYDVVANTWDDMR-EGMVRGWRGPVAAMD-EEV 297 (387)
Q Consensus 242 --------~~~~~~~v~---~~g~lyv~gg~~--------~---~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~~~-~g~ 297 (387)
.+..+.+++ ++++||++||.. . .+++||+.+++|..+. ..++.++..+++++. +|+
T Consensus 389 ~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 389 QSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS 468 (656)
T ss_dssp EETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC
T ss_pred ccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC
Confidence 001123332 489999999953 2 7899999999999886 446777767776666 999
Q ss_pred EEEEeCCC-----------CeEEEEeCCCCceEEccccccccCceeEEEe--CCeEEEEecC
Q 044903 298 LYGIDENS-----------CTLSKYDEVMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCEN 346 (387)
Q Consensus 298 ly~~g~~~-----------~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~~~l~v~gg~ 346 (387)
||++||.+ ..+++||+++++|+.+..++..+..++++.+ +|+|||+||+
T Consensus 469 i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 469 TFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 99999842 4589999999999999988887777766666 9999999985
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=7.9e-26 Score=229.56 Aligned_cols=230 Identities=13% Similarity=0.134 Sum_probs=175.4
Q ss_pred EEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEe--CCEEEEEcCccCCC----CCCCCccEEEeCCCCc
Q 044903 102 LFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSL--SGKLILLAATTHNF----NPALTRPLIFDPICRT 175 (387)
Q Consensus 102 ~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~l~v~GG~~~~~----~~~~~~~~vydp~t~~ 175 (387)
+..|||.+++|..++++|.. ++.+++. +++||++||..... ......+++||+.+++
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~-----------------~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~ 230 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIV-----------------PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI 230 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSC-----------------CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC
T ss_pred cccCCCCCCeeeeeccCCCC-----------------ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc
Confidence 34578999999998877751 2444554 99999999975421 1123468999999999
Q ss_pred eeeCCCCCCCceeee---EEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE-
Q 044903 176 WTFGPELVTPRRWCA---AGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW- 251 (387)
Q Consensus 176 W~~l~~~~~~r~~~~---~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~- 251 (387)
|+.+++|+.+|..++ ++..+++|||+||... .++++||+.+++ |..+++|+.+|.. +.++++
T Consensus 231 w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-------~~v~~yd~~t~~----W~~~~~~~~~R~~---~s~~~~~ 296 (656)
T 1k3i_A 231 VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-------KKTSLYDSSSDS----WIPGPDMQVARGY---QSSATMS 296 (656)
T ss_dssp BCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-------TCEEEEEGGGTE----EEECCCCSSCCSS---CEEEECT
T ss_pred EEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-------CceEEecCcCCc----eeECCCCCccccc---cceEEec
Confidence 999999988876543 3346899999999754 179999999999 9999999977643 888888
Q ss_pred CCEEEEEeee-C-----CeEEEEECCCCceeeccc----cccCC------------------------------------
Q 044903 252 KGKLCLVNVK-G-----AEGAVYDVVANTWDDMRE----GMVRG------------------------------------ 285 (387)
Q Consensus 252 ~g~lyv~gg~-~-----~~i~~yD~~~~~W~~~~~----~~~~~------------------------------------ 285 (387)
+|+||++||. . ..+++||+++++|+.++. .++..
T Consensus 297 dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~ 376 (656)
T 1k3i_A 297 DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYT 376 (656)
T ss_dssp TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEEC
T ss_pred CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeec
Confidence 9999999994 2 689999999999998631 01110
Q ss_pred ---------------------CCCcEEEE---eCCeEEEEeCCC--------C---eEEEEeCCCCceEEcc--cccccc
Q 044903 286 ---------------------WRGPVAAM---DEEVLYGIDENS--------C---TLSKYDEVMDDWKEVV--KSDLLK 328 (387)
Q Consensus 286 ---------------------~~~~~~~~---~~g~ly~~g~~~--------~---~v~~yd~~~~~W~~v~--~~~~~~ 328 (387)
....++++ .+++||++||.. . .+.+||++++.|+++. .+|..+
T Consensus 377 ~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R 456 (656)
T 1k3i_A 377 SGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFAR 456 (656)
T ss_dssp STTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCC
T ss_pred CCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCc
Confidence 01123332 489999999842 2 6889999999999986 677777
Q ss_pred CceeEEEe-CCeEEEEecCC-----------ceEEEEEecCCCCCceeEE
Q 044903 329 GARHAAAG-GGRVCAVCENG-----------GGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 329 ~~~~~~~~-~~~l~v~gg~~-----------~~i~v~d~~~~~~~~~W~~ 366 (387)
..+.++.+ +|+|||+||.+ ..+++||+.+. .|+.
T Consensus 457 ~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~----~W~~ 502 (656)
T 1k3i_A 457 TFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD----TFYK 502 (656)
T ss_dssp BSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT----EEEE
T ss_pred ccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC----ceee
Confidence 76776766 99999999842 56899999976 8997
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.22 E-value=9.7e-10 Score=105.52 Aligned_cols=276 Identities=12% Similarity=0.093 Sum_probs=145.4
Q ss_pred CCCCCChHHHHHHHhhhcC---hhhHHHhhHhhhhhccCCCCCCcceEEEeecCCCCCCCCCeEEEEEeCCCC-------
Q 044903 41 PLLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPPFLSLYALFSPKSNSSSTPIHLFTFDPVSS------- 110 (387)
Q Consensus 41 ~~~~~LP~dl~~~iL~rLP---~~~~r~Vck~W~~li~s~~f~~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~------- 110 (387)
..+..||+||+.+||++|+ +.++.+|||+|+.++.++.+++.++.......+ ................
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~wk~~~~ 94 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEP--LHIKRRKVIKPGFIHSPWKSAYI 94 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSC--CCCCC--CCSSCCCCCHHHHHHH
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccc--cccccceecCCCccCCcHHHHHh
Confidence 4678899999999999999 888889999999999987664432210000000 0000000000000011
Q ss_pred -------CcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC
Q 044903 111 -------TWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV 183 (387)
Q Consensus 111 -------~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~ 183 (387)
.|.....-+. ..+..|.. . -..+...++..++.|+.+ ..+.+||..+.+-... +.
T Consensus 95 ~~~~~~~~w~~~~~~~~----~~l~~h~~----~-v~~~~~~~g~~l~sg~~d-------g~i~vwd~~~~~~~~~--~~ 156 (445)
T 2ovr_B 95 RQHRIDTNWRRGELKSP----KVLKGHDD----H-VITCLQFCGNRIVSGSDD-------NTLKVWSAVTGKCLRT--LV 156 (445)
T ss_dssp HHHHHHHHHHHSCCCCC----EEEECSTT----S-CEEEEEEETTEEEEEETT-------SCEEEEETTTCCEEEE--CC
T ss_pred hhhhhhhcccCCCccee----EEecccCC----C-cEEEEEEcCCEEEEEECC-------CcEEEEECCCCcEEEE--Ec
Confidence 1222111000 00001110 0 023444556666666632 4678999887764331 11
Q ss_pred CCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCC
Q 044903 184 TPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGA 263 (387)
Q Consensus 184 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~ 263 (387)
.......+....+.+++.|+.+. .+.+||..+++ -...-.... ....++.+++...+.|+.+.
T Consensus 157 ~h~~~v~~~~~~~~~l~s~~~dg--------~i~vwd~~~~~----~~~~~~~h~-----~~v~~~~~~~~~l~s~s~dg 219 (445)
T 2ovr_B 157 GHTGGVWSSQMRDNIIISGSTDR--------TLKVWNAETGE----CIHTLYGHT-----STVRCMHLHEKRVVSGSRDA 219 (445)
T ss_dssp CCSSCEEEEEEETTEEEEEETTS--------CEEEEETTTTE----EEEEECCCS-----SCEEEEEEETTEEEEEETTS
T ss_pred CCCCCEEEEEecCCEEEEEeCCC--------eEEEEECCcCc----EEEEECCCC-----CcEEEEEecCCEEEEEeCCC
Confidence 11111222233455666666543 68899988876 322211111 11334445566666777778
Q ss_pred eEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEE
Q 044903 264 EGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAV 343 (387)
Q Consensus 264 ~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~ 343 (387)
.+.+||..+.+-...-.... .....+..++..++.++.++.+.+||..+.+- +............+..++..++.
T Consensus 220 ~i~~wd~~~~~~~~~~~~~~---~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~l~~ 294 (445)
T 2ovr_B 220 TLRVWDIETGQCLHVLMGHV---AAVRCVQYDGRRVVSGAYDFMVKVWDPETETC--LHTLQGHTNRVYSLQFDGIHVVS 294 (445)
T ss_dssp EEEEEESSSCCEEEEEECCS---SCEEEEEECSSCEEEEETTSCEEEEEGGGTEE--EEEECCCSSCEEEEEECSSEEEE
T ss_pred EEEEEECCCCcEEEEEcCCc---ccEEEEEECCCEEEEEcCCCEEEEEECCCCcE--eEEecCCCCceEEEEECCCEEEE
Confidence 89999988764322111011 11122233666777777788999999876532 22222233333344447777777
Q ss_pred ecCCceEEEEEecCC
Q 044903 344 CENGGGIVVVDVKAA 358 (387)
Q Consensus 344 gg~~~~i~v~d~~~~ 358 (387)
|+.++.+.+||+.+.
T Consensus 295 ~~~d~~i~i~d~~~~ 309 (445)
T 2ovr_B 295 GSLDTSIRVWDVETG 309 (445)
T ss_dssp EETTSCEEEEETTTC
T ss_pred EeCCCeEEEEECCCC
Confidence 777777888887643
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.21 E-value=5.8e-10 Score=106.86 Aligned_cols=282 Identities=15% Similarity=0.127 Sum_probs=153.4
Q ss_pred CCCCCChHH----HHHHHhhhcC---hhhHHHhhHhhhhhccCCCCCCcceEEEeec--------CCC---------CCC
Q 044903 41 PLLPGLPDH----IAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPPFLSLYALFS--------PKS---------NSS 96 (387)
Q Consensus 41 ~~~~~LP~d----l~~~iL~rLP---~~~~r~Vck~W~~li~s~~f~~~~~l~~~~~--------~~~---------~~~ 96 (387)
..+..||+| |+..||++|+ +.++.+|||+|+.++.++.+++.++...+.. ... ...
T Consensus 9 d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 88 (435)
T 1p22_A 9 DFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPP 88 (435)
T ss_dssp CHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC-----
T ss_pred ChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCC
Confidence 456779999 9999999999 8888999999999999887654321111000 000 000
Q ss_pred ---CCCeEEE--EE-------eCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCCC
Q 044903 97 ---STPIHLF--TF-------DPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALT 164 (387)
Q Consensus 97 ---~~~~~~~--~~-------d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~ 164 (387)
.+...++ .| ......|........ ...++. ....+..+...++..++.|+.+ .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~-----~~~~~~---~~~~~v~~~~~d~~~l~~g~~d-------g 153 (435)
T 1p22_A 89 DGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQ-----RIHCRS---ETSKGVYCLQYDDQKIVSGLRD-------N 153 (435)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCC-----CEECCC---SSCCCEEEEECCSSEEEEEESS-------S
T ss_pred CCCCCchhhHHhhhhhhhcchhHHHhhhccCCccce-----EEeccc---CCCCcEEEEEECCCEEEEEeCC-------C
Confidence 0000000 00 000112332211110 000000 0011233455677777777643 4
Q ss_pred ccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccccc
Q 044903 165 RPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSRE 244 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~ 244 (387)
.+.+||..+.+-... +........+...++++++.|+.+. .+.+||..+++ -...-.... .
T Consensus 154 ~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~dg--------~i~vwd~~~~~----~~~~~~~h~-----~ 214 (435)
T 1p22_A 154 TIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSDS--------TVRVWDVNTGE----MLNTLIHHC-----E 214 (435)
T ss_dssp CEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETTS--------CEEEEESSSCC----EEEEECCCC-----S
T ss_pred eEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCCC--------eEEEEECCCCc----EEEEEcCCC-----C
Confidence 678999887654432 1111112233334777777777644 68899998877 332211111 1
Q ss_pred ceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEcccc
Q 044903 245 AIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKS 324 (387)
Q Consensus 245 ~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~ 324 (387)
...++.+++.+++.|+.+..+.+||..+..-................+..++...+.++.++.|.+||..+.+- +...
T Consensus 215 ~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~--~~~~ 292 (435)
T 1p22_A 215 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF--VRTL 292 (435)
T ss_dssp CEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE--EEEE
T ss_pred cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE--EEEE
Confidence 13445556666677777789999999876432111101100111122223556667777789999999987643 2233
Q ss_pred ccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 325 DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 325 ~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
........++..++..++.|+.++.+.+||+.++
T Consensus 293 ~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 293 NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ECCSSCEEEEEEETTEEEEEETTSCEEEEETTTC
T ss_pred cCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCC
Confidence 3333344455567788888888889999998854
No 21
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.10 E-value=1.6e-08 Score=97.40 Aligned_cols=106 Identities=12% Similarity=-0.012 Sum_probs=66.8
Q ss_pred EEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccc
Q 044903 249 VGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 249 v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~ 327 (387)
+..++.+.+.|+.+..+.+||..+.+-...-..... .-.+++. .++...+.++.++.|.+||..+.+ .+......
T Consensus 276 ~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h 351 (464)
T 3v7d_B 276 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD--RIYSTIYDHERKRCISASMDTTIRIWDLENGE--LMYTLQGH 351 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEETTTTEEEEEETTSCEEEEETTTTE--EEEEECCC
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--EEEEEeCC
Confidence 344566666777778899999987643222111111 1112222 345667777788999999998764 33333334
Q ss_pred cCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 328 KGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
......+..+++.++.|+.++.+.+||+.+.
T Consensus 352 ~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 352 TALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp SSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 4445556667888888888899999999853
No 22
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.81 E-value=1.7e-09 Score=71.13 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=35.7
Q ss_pred CCCCCCChHHHHHHHhhhcC---hhhHHHhhHhhhhhccCCCCCC
Q 044903 40 QPLLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPP 81 (387)
Q Consensus 40 ~~~~~~LP~dl~~~iL~rLP---~~~~r~Vck~W~~li~s~~f~~ 81 (387)
...|..||+||+.+||++|| +.++++|||+|+.++.++.|++
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 35688999999999999999 7788999999999999988754
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.59 E-value=1.2e-05 Score=73.82 Aligned_cols=221 Identities=12% Similarity=-0.022 Sum_probs=128.0
Q ss_pred CeEEEEEeCCCCCc-ccCCCCCCCCCccccccCCCccccccceeEEE-eCCEEEEEcCccCCCCCCCCccEEEeCCCCce
Q 044903 99 PIHLFTFDPVSSTW-DPLPPPPPDPPLHLILHHPSFLSRNLPVQLVS-LSGKLILLAATTHNFNPALTRPLIFDPICRTW 176 (387)
Q Consensus 99 ~~~~~~~d~~~~~W-~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W 176 (387)
...+.++|+.+.+- ..++.... ...++. .++++|+.... ...+.++|+.|++-
T Consensus 63 ~~~v~viD~~t~~~~~~i~~~~~------------------p~~i~~~~~g~lyv~~~~-------~~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 63 SHVIFAIDINTFKEVGRITGFTS------------------PRYIHFLSDEKAYVTQIW-------DYRIFIINPKTYEI 117 (328)
T ss_dssp GTEEEEEETTTCCEEEEEECCSS------------------EEEEEEEETTEEEEEEBS-------CSEEEEEETTTTEE
T ss_pred CCEEEEEECcccEEEEEcCCCCC------------------CcEEEEeCCCeEEEEECC-------CCeEEEEECCCCeE
Confidence 34688899988765 33432211 134444 67899998642 25789999999875
Q ss_pred ee---CCCCCC-CceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEEC
Q 044903 177 TF---GPELVT-PRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWK 252 (387)
Q Consensus 177 ~~---l~~~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~ 252 (387)
.. ++.... ...-...+..++++||..-. ....+.++|+.+++ ....-+...... ..+..-+
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~~~~v~viD~~t~~----~~~~i~~g~~p~----~i~~~~d 182 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------YQNRILKIDTETDK----VVDELTIGIQPT----SLVMDKY 182 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEEETTEEEEEECT-------TCCEEEEEETTTTE----EEEEEECSSCBC----CCEECTT
T ss_pred EEEEEcCCccccCCCcceEEEECCEEEEEcCC-------CCCEEEEEECCCCe----EEEEEEcCCCcc----ceEEcCC
Confidence 43 222100 00111233378899998521 12378999999987 443222211110 1222336
Q ss_pred CEEEEEeeeC----------CeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEE
Q 044903 253 GKLCLVNVKG----------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKE 320 (387)
Q Consensus 253 g~lyv~gg~~----------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~ 320 (387)
|++|+..... ..+.++|+++.+....-. .+.+.....+++. ++.||+... .+++||+++.+...
T Consensus 183 G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 183 NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-FKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPV 258 (328)
T ss_dssp SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-CCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCS
T ss_pred CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-cCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceee
Confidence 8999885432 579999999886542211 1222222344544 567888743 89999998876532
Q ss_pred cccccc-ccCceeEEE--eCCeEEEEe----cCCceEEEEEecCCCCCceeEE
Q 044903 321 VVKSDL-LKGARHAAA--GGGRVCAVC----ENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 321 v~~~~~-~~~~~~~~~--~~~~l~v~g----g~~~~i~v~d~~~~~~~~~W~~ 366 (387)
....+. .....+++. .+++|||.. ..++.+.+||+... -.|++
T Consensus 259 ~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~---~~~~i 308 (328)
T 3dsm_A 259 RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK---LIDEF 308 (328)
T ss_dssp SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC---EEEEE
T ss_pred eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC---EEEEE
Confidence 221121 223444544 378999997 45678999998833 34554
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.55 E-value=2.7e-05 Score=71.42 Aligned_cols=220 Identities=12% Similarity=-0.022 Sum_probs=129.0
Q ss_pred CeEEEEEeCCCCCcccCCCC--CCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCce
Q 044903 99 PIHLFTFDPVSSTWDPLPPP--PPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTW 176 (387)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W 176 (387)
...+.++|+.+++...--.. ... .-+..+..++..++++|+.... .+.+.++|+.|.+-
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~------------~lg~~~~~i~~~~~~lyv~~~~-------~~~v~viD~~t~~~ 76 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGF------------KLGDVAQSMVIRDGIGWIVVNN-------SHVIFAIDINTFKE 76 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSS------------CCBSCEEEEEEETTEEEEEEGG-------GTEEEEEETTTCCE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCc------------ccCccceEEEEECCEEEEEEcC-------CCEEEEEECcccEE
Confidence 45688999998765431100 000 0012234566678999998752 25789999999876
Q ss_pred e-eCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC--cccccceeEEEECC
Q 044903 177 T-FGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG--RFSREAIDAVGWKG 253 (387)
Q Consensus 177 ~-~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~--~~~~~~~~~v~~~g 253 (387)
. +++....++ ..+..-++++||....+ ..+.++|+.+.+ -...-+.+.. ... .....+..++
T Consensus 77 ~~~i~~~~~p~--~i~~~~~g~lyv~~~~~--------~~v~~iD~~t~~----~~~~i~~g~~~~~~~-~p~~i~~~~~ 141 (328)
T 3dsm_A 77 VGRITGFTSPR--YIHFLSDEKAYVTQIWD--------YRIFIINPKTYE----ITGYIECPDMDMESG-STEQMVQYGK 141 (328)
T ss_dssp EEEEECCSSEE--EEEEEETTEEEEEEBSC--------SEEEEEETTTTE----EEEEEECTTCCTTTC-BCCCEEEETT
T ss_pred EEEcCCCCCCc--EEEEeCCCeEEEEECCC--------CeEEEEECCCCe----EEEEEEcCCccccCC-CcceEEEECC
Confidence 3 343333333 22233577999986432 378999999887 3321112210 000 1123444789
Q ss_pred EEEEEee-eCCeEEEEECCCCceee-ccccccCCCCCcEEEEeCCeEEEEeCCC----------CeEEEEeCCCCceEEc
Q 044903 254 KLCLVNV-KGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAMDEEVLYGIDENS----------CTLSKYDEVMDDWKEV 321 (387)
Q Consensus 254 ~lyv~gg-~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~~~g~ly~~g~~~----------~~v~~yd~~~~~W~~v 321 (387)
++|+.+. ....+.++|+++++... ++.+. . ........+|++|+..... +.|+++|+++.+....
T Consensus 142 ~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~--~-p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~ 218 (328)
T 3dsm_A 142 YVYVNCWSYQNRILKIDTETDKVVDELTIGI--Q-PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ 218 (328)
T ss_dssp EEEEEECTTCCEEEEEETTTTEEEEEEECSS--C-BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCCCEEEEEECCCCeEEEEEEcCC--C-ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE
Confidence 9999864 35789999999886543 22111 1 1112223458899887433 6899999998876543
Q ss_pred cccccccCceeEEEe--CCeEEEEecCCceEEEEEecCC
Q 044903 322 VKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
...+.......++.. ++.+|+..+ .++++|+.+.
T Consensus 219 ~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~ 254 (328)
T 3dsm_A 219 FKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEAD 254 (328)
T ss_dssp EECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCS
T ss_pred EecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCC
Confidence 333322234445544 567777743 8999998754
No 25
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.54 E-value=1.6e-08 Score=90.38 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=40.0
Q ss_pred CCCCCCCChHHHHHHHhhhcC---hh-hHHHhhHhhhhhccCCCCCCcc
Q 044903 39 HQPLLPGLPDHIAHLCLSHVH---PS-ILHNVCHSWRRLIYSPSFPPFL 83 (387)
Q Consensus 39 ~~~~~~~LP~dl~~~iL~rLP---~~-~~r~Vck~W~~li~s~~f~~~~ 83 (387)
....+..||+||+++||+||| +. ++++|||+|+.|++++.|++.+
T Consensus 47 ~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~ 95 (297)
T 2e31_A 47 AVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLK 95 (297)
T ss_dssp CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHH
T ss_pred cccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHH
Confidence 356789999999999999999 77 9999999999999999986543
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.47 E-value=2.1e-05 Score=68.37 Aligned_cols=151 Identities=23% Similarity=0.253 Sum_probs=102.9
Q ss_pred eEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEE
Q 044903 190 AAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD 269 (387)
+....++.+|+..|... .+.+.++|+.+++ =...-+++...++ ...+..+++||++......+.+||
T Consensus 25 GL~~~~~~LyestG~~g------~S~v~~vD~~tgk----v~~~~~l~~~~fg---eGi~~~~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 25 GLFYLRGHLYESTGETG------RSSVRKVDLETGR----ILQRAEVPPPYFG---AGIVAWRDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp EEEEETTEEEEEECCTT------SCEEEEEETTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEESSSSEEEEEE
T ss_pred cEEEECCEEEEECCCCC------CceEEEEECCCCC----EEEEEeCCCCcce---eEEEEeCCEEEEEEeeCCEEEEEE
Confidence 44556789999988643 3478999999998 4444445544333 445667999999987778999999
Q ss_pred CCCCcee-eccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE-cc--cccc-ccCceeEEEeCCeEEEEe
Q 044903 270 VVANTWD-DMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE-VV--KSDL-LKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 270 ~~~~~W~-~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~-v~--~~~~-~~~~~~~~~~~~~l~v~g 344 (387)
+++.+=. +++.. . .+-.++..+++||+-.+ +++|.++|+++.+-.. +. ..+. ....-.+...+|+||+-.
T Consensus 92 ~~tl~~~~ti~~~-~---~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 92 LATLTPRARFRYP-G---EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp TTTTEEEEEEECS-S---CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CCcCcEEEEEeCC-C---CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEE
Confidence 9876432 33331 2 24466666788999886 7889999999865432 21 1111 122223445699999877
Q ss_pred cCCceEEEEEecCC
Q 044903 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~v~d~~~~ 358 (387)
...+.|.++|+.++
T Consensus 167 w~s~~I~vIDp~tG 180 (243)
T 3mbr_X 167 WLTSRIARIDPASG 180 (243)
T ss_dssp TTTTEEEEECTTTC
T ss_pred CCCCeEEEEECCCC
Confidence 67889999999865
No 27
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.27 E-value=4.5e-05 Score=66.97 Aligned_cols=149 Identities=19% Similarity=0.163 Sum_probs=98.6
Q ss_pred EeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECC
Q 044903 192 GYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 192 ~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~ 271 (387)
...++.+|+..|... .+.+.++|+++++ =...-+++...++ ...+..+++||+.......+.+||++
T Consensus 49 ~~~~~~LyestG~~g------~S~v~~vD~~Tgk----v~~~~~l~~~~Fg---eGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 49 FYRNGYFYESTGLNG------RSSIRKVDIESGK----TLQQIELGKRYFG---EGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEETTEEEEEEEETT------EEEEEEECTTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEESSSSEEEEEETT
T ss_pred EEECCEEEEECCCCC------CceEEEEECCCCc----EEEEEecCCccce---eEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 344789999988632 3478999999998 4333344433222 33566789999998777899999998
Q ss_pred CCce-eeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE-cccc--c-cccCceeEEEeCCeEEEEecC
Q 044903 272 ANTW-DDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE-VVKS--D-LLKGARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 272 ~~~W-~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~-v~~~--~-~~~~~~~~~~~~~~l~v~gg~ 346 (387)
+.+= .+++. ... +-.++..+++||+..+ ++.|+.+|+++.+-.. +... + +....--+...+|+||+-...
T Consensus 116 t~~~~~ti~~-~~e---G~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~ 190 (262)
T 3nol_A 116 NLRQVRSFNY-DGE---GWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQ 190 (262)
T ss_dssp TCCEEEEEEC-SSC---CCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETT
T ss_pred cCcEEEEEEC-CCC---ceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEcc
Confidence 7653 33333 123 3355666778898876 6789999999865333 2211 1 111111244458999988777
Q ss_pred CceEEEEEecCC
Q 044903 347 GGGIVVVDVKAA 358 (387)
Q Consensus 347 ~~~i~v~d~~~~ 358 (387)
++.|.++|+.++
T Consensus 191 ~~~I~vIDp~tG 202 (262)
T 3nol_A 191 TNKIVRIDPETG 202 (262)
T ss_dssp SSEEEEECTTTC
T ss_pred CCeEEEEECCCC
Confidence 889999999865
No 28
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.24 E-value=0.00081 Score=58.38 Aligned_cols=193 Identities=10% Similarity=-0.091 Sum_probs=120.1
Q ss_pred eeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 140 VQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 140 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
..+...++.||+..|... .+.+.++|+.|++-..--+++..-...+.+..+++||++.... ..+.+|
T Consensus 24 qGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~--------~~v~v~ 90 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN--------HEGFVY 90 (243)
T ss_dssp EEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEE
T ss_pred ccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC--------CEEEEE
Confidence 456677899999888432 3578999999998766444443333455677899999985443 388999
Q ss_pred eCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCce-eeccc---cccCCCCCcEEEEeC
Q 044903 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW-DDMRE---GMVRGWRGPVAAMDE 295 (387)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~---~~~~~~~~~~~~~~~ 295 (387)
|+.+-+ .+..++.+. .....+.-+++||+..| ...+..+|+++.+= ..++. +.+... -.-+...+
T Consensus 91 D~~tl~------~~~ti~~~~---~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~-lNeLe~~~ 159 (243)
T 3mbr_X 91 DLATLT------PRARFRYPG---EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDN-LNELEWVN 159 (243)
T ss_dssp ETTTTE------EEEEEECSS---CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCC-EEEEEEET
T ss_pred ECCcCc------EEEEEeCCC---CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCccccc-ceeeEEeC
Confidence 998866 222222221 22334444567888876 57899999988643 33321 111111 11234558
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEE---cccccc-c------c--CceeEEEe--CCeEEEEecCCceEEEEEec
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKE---VVKSDL-L------K--GARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~---v~~~~~-~------~--~~~~~~~~--~~~l~v~gg~~~~i~v~d~~ 356 (387)
|+||+-...+..|.+-|+++.+=.. +..+.+ . . ..-+++-. ++++||.|..=..++-+.+.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 9999887667899999999876443 332211 1 1 12334433 67899887655666666655
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.24 E-value=0.00028 Score=62.43 Aligned_cols=197 Identities=5% Similarity=-0.162 Sum_probs=118.3
Q ss_pred eeEEEeC-CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEE
Q 044903 140 VQLVSLS-GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 140 ~~~~~~~-~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
+.++..+ +.||+..|.. ..+.+.++|+.|++-..--+++......+.+..++++|+..-.. ..+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~--------~~v~v 90 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK--------NIGFI 90 (266)
T ss_dssp EEEEECSTTEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC--------SEEEE
T ss_pred ccEEEeCCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC--------CEEEE
Confidence 4455544 7899987621 23679999999998665333332222345566688999985432 37899
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc-eeeccccc-cCCC-CCcEEEEeC
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT-WDDMREGM-VRGW-RGPVAAMDE 295 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~-~~~~-~~~~~~~~~ 295 (387)
||+.+.+ .+..++.+ . ......+.-++++|+..+ ...+.++|+++.+ =..++.+. .... .-..+...+
T Consensus 91 iD~~t~~------v~~~i~~g-~-~~g~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~d 161 (266)
T 2iwa_A 91 YDRRTLS------NIKNFTHQ-M-KDGWGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYIN 161 (266)
T ss_dssp EETTTTE------EEEEEECC-S-SSCCEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EECCCCc------EEEEEECC-C-CCeEEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEEC
Confidence 9998765 22222222 0 111222333456887764 5799999998754 33333211 0010 011233448
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEE---cccc-cc--------ccCceeEEEe--CCeEEEEecCCceEEEEEecCC
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKE---VVKS-DL--------LKGARHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~---v~~~-~~--------~~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++||+-...++.|.+-|+++.+=.. +... +. .....+++.. ++++||.|+....++++|....
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 8999887777899999998875333 3211 00 1122444443 5689999888999999999854
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.22 E-value=0.00049 Score=60.35 Aligned_cols=184 Identities=14% Similarity=-0.007 Sum_probs=105.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+|+... . ..+.+||+.++................+..-++++||..... ..+.+||..+..
T Consensus 77 ~g~l~v~~~--~------~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~--------~~i~~~~~~~~~ 140 (270)
T 1rwi_B 77 AGTVYVTDF--N------NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGN--------NRVVKLAAGSKT 140 (270)
T ss_dssp TCCEEEEET--T------TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGG--------TEEEEECTTCCS
T ss_pred CCCEEEEcC--C------CEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCC--------CEEEEEECCCce
Confidence 567887654 1 468899998876655432211111111222267899875432 257778777665
Q ss_pred cccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe-CCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~g~ly~~g 302 (387)
.......... .. ...+. -+|++|+.......+.+||+....-..... .+...+ .+++. +|.||+..
T Consensus 141 ----~~~~~~~~~~-~p---~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 141 ----QTVLPFTGLN-DP---DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp ----CEECCCCSCC-SC---CCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECTTCCEEEEE
T ss_pred ----eEeeccccCC-Cc---eeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECCCCCEEEEE
Confidence 4333211100 00 12222 257899886555789999988765433221 111122 33333 45899998
Q ss_pred CCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEecC
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
...+.|.+||+++..-..... .......+++. -+|+||+....++.|.+|+...
T Consensus 210 ~~~~~v~~~~~~~~~~~~~~~-~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 210 HNTNQVVKLLAGSTTSTVLPF-TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp TTTSCEEEECTTCSCCEECCC-CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred CCCCcEEEEcCCCCcceeecc-CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 777889999997764333221 11222334443 4678999977788999998874
No 31
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.17 E-value=0.00068 Score=62.91 Aligned_cols=164 Identities=13% Similarity=0.047 Sum_probs=97.6
Q ss_pred CccEEEeCCCC--ceeeCCCCCCCc--------eeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEc
Q 044903 164 TRPLIFDPICR--TWTFGPELVTPR--------RWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT 233 (387)
Q Consensus 164 ~~~~vydp~t~--~W~~l~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~ 233 (387)
..++.+|+.+. .|+.-...+... .....+..++.+|+.+.. ..+..+|+.+++.. |+.-
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~---------g~l~~~d~~tG~~~--w~~~ 266 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYN---------GNLTALDLRSGQIM--WKRE 266 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTT---------SCEEEEETTTCCEE--EEEC
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecC---------cEEEEEECCCCcEE--eecc
Confidence 35788999876 466532221111 123334567888886421 25788999888754 8764
Q ss_pred CCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC--ceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEE
Q 044903 234 GELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKY 311 (387)
Q Consensus 234 ~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~y 311 (387)
.+- ....+..++.+|+... ...+.+||+.++ .|+.-... ... ..+.++.++.||+.. .++.++++
T Consensus 267 ~~~--------~~~~~~~~~~l~~~~~-~g~l~~~d~~tG~~~w~~~~~~-~~~--~~~~~~~~~~l~v~~-~~g~l~~~ 333 (376)
T 3q7m_A 267 LGS--------VNDFIVDGNRIYLVDQ-NDRVMALTIDGGVTLWTQSDLL-HRL--LTSPVLYNGNLVVGD-SEGYLHWI 333 (376)
T ss_dssp CCC--------EEEEEEETTEEEEEET-TCCEEEEETTTCCEEEEECTTT-TSC--CCCCEEETTEEEEEC-TTSEEEEE
T ss_pred CCC--------CCCceEECCEEEEEcC-CCeEEEEECCCCcEEEeecccC-CCc--ccCCEEECCEEEEEe-CCCeEEEE
Confidence 211 1335567899998753 347899999876 58764211 111 123345688888775 46789999
Q ss_pred eCCCCc--eEEccccccccCceeEEEeCCeEEEEecCCceEEEEE
Q 044903 312 DEVMDD--WKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 312 d~~~~~--W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d 354 (387)
|+++.+ |+.-. .........+..++.||+. ..++.+++||
T Consensus 334 d~~tG~~~~~~~~--~~~~~~~~~~~~~~~l~v~-~~~G~l~~~~ 375 (376)
T 3q7m_A 334 NVEDGRFVAQQKV--DSSGFQTEPVAADGKLLIQ-AKDGTVYSIT 375 (376)
T ss_dssp ETTTCCEEEEEEC--CTTCBCSCCEEETTEEEEE-BTTSCEEEEE
T ss_pred ECCCCcEEEEEec--CCCcceeCCEEECCEEEEE-eCCCEEEEEe
Confidence 998765 54422 1111112234568888887 4556788776
No 32
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.16 E-value=0.00031 Score=61.59 Aligned_cols=194 Identities=7% Similarity=-0.125 Sum_probs=115.8
Q ss_pred eeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 140 VQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 140 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
..+...++.||+..|... .+.+.++|+.|.+-..--+++..-...+.+..+++||++...+ ..+.+|
T Consensus 46 qGL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~--------~~v~v~ 112 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN--------GLGFVW 112 (262)
T ss_dssp EEEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS--------SEEEEE
T ss_pred ceEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC--------CEEEEE
Confidence 345556889999888422 2578999999998765334432222344667799999995443 388999
Q ss_pred eCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc-eeeccccc-cCCCCCc-EEEEeCC
Q 044903 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT-WDDMREGM-VRGWRGP-VAAMDEE 296 (387)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~-~~~~~~~-~~~~~~g 296 (387)
|+.+.+ =. ..++.+. .....+.-+++||+..| ...+..+|+++.+ -..++... ....... .+...+|
T Consensus 113 D~~t~~----~~--~ti~~~~---eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G 182 (262)
T 3nol_A 113 NIRNLR----QV--RSFNYDG---EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDG 182 (262)
T ss_dssp ETTTCC----EE--EEEECSS---CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETT
T ss_pred ECccCc----EE--EEEECCC---CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECC
Confidence 999877 22 2222211 11333333556787765 5789999998754 33333211 0011111 2344589
Q ss_pred eEEEEeCCCCeEEEEeCCCCceEEccccc---c-c-------cCceeEEEe--CCeEEEEecCCceEEEEEec
Q 044903 297 VLYGIDENSCTLSKYDEVMDDWKEVVKSD---L-L-------KGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 297 ~ly~~g~~~~~v~~yd~~~~~W~~v~~~~---~-~-------~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~ 356 (387)
+||+-...++.|.+-|+++.+=...-..+ + . ....+++-. ++++||.|..=..++-+.+.
T Consensus 183 ~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 183 EIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 99988777789999999988654433221 1 1 112334433 57888886555666655554
No 33
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.10 E-value=0.00023 Score=62.45 Aligned_cols=148 Identities=9% Similarity=-0.017 Sum_probs=97.8
Q ss_pred eEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEE
Q 044903 190 AAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD 269 (387)
+....++.+|+..|... .+.++|+++++.. ..+ ++...++ ...+..+++||+.......+.+||
T Consensus 59 GL~~~~~~Ly~stG~~g--------~v~~iD~~Tgkv~---~~~--l~~~~Fg---eGit~~g~~Ly~ltw~~~~v~V~D 122 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQG--------TLRQLSLESAQPV---WME--RLGNIFA---EGLASDGERLYQLTWTEGLLFTWS 122 (268)
T ss_dssp EEEEETTEEEEEETTTT--------EEEECCSSCSSCS---EEE--ECTTCCE---EEEEECSSCEEEEESSSCEEEEEE
T ss_pred eEEEECCEEEEEcCCCC--------EEEEEECCCCcEE---eEE--CCCCcce---eEEEEeCCEEEEEEccCCEEEEEE
Confidence 34455789999988644 3889999999832 222 3332222 335567889999987778999999
Q ss_pred CCCCce-eeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE-cc--ccccc-cCceeEEEeCCeEEEEe
Q 044903 270 VVANTW-DDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE-VV--KSDLL-KGARHAAAGGGRVCAVC 344 (387)
Q Consensus 270 ~~~~~W-~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~-v~--~~~~~-~~~~~~~~~~~~l~v~g 344 (387)
+++.+= .+++. ...+ -.++..+++||+..+ ++.|..+|+++.+-.. +. ..+.. ...-.+...+|+||+-.
T Consensus 123 ~~Tl~~~~ti~~-~~eG---wGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv 197 (268)
T 3nok_A 123 GMPPQRERTTRY-SGEG---WGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI 197 (268)
T ss_dssp TTTTEEEEEEEC-SSCC---CCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CCcCcEEEEEeC-CCce---eEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE
Confidence 987643 33433 2333 355667888999876 7899999999865433 21 11111 11122444589999876
Q ss_pred cCCceEEEEEecCC
Q 044903 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~v~d~~~~ 358 (387)
..++.|.++|+.++
T Consensus 198 w~s~~I~vIDp~TG 211 (268)
T 3nok_A 198 WHSSDVLEIDPATG 211 (268)
T ss_dssp TTCSEEEEECTTTC
T ss_pred CCCCeEEEEeCCCC
Confidence 67889999999865
No 34
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.09 E-value=0.00052 Score=60.66 Aligned_cols=151 Identities=20% Similarity=0.175 Sum_probs=96.8
Q ss_pred EEeeC-CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEE
Q 044903 191 AGYSR-GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYD 269 (387)
Q Consensus 191 ~~~~~-~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD 269 (387)
....+ +.+|+..|... .+.+.++|+.+++ =...-+++...++ ...+..++++|+.......+.+||
T Consensus 26 l~~~~dg~Lyvstg~~~------~s~v~~iD~~tg~----v~~~i~l~~~~fg---eGi~~~g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 26 LVYAENDTLFESTGLYG------RSSVRQVALQTGK----VENIHKMDDSYFG---EGLTLLNEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp EEECSTTEEEEEECSTT------TCEEEEEETTTCC----EEEEEECCTTCCE---EEEEEETTEEEEEETTCSEEEEEE
T ss_pred EEEeCCCeEEEECCCCC------CCEEEEEECCCCC----EEEEEecCCCcce---EEEEEeCCEEEEEEecCCEEEEEE
Confidence 33334 79999877421 2479999999998 4333233322221 334556889999987778999999
Q ss_pred CCCCc-eeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE-cc--ccc-cccCceeEEEeCCeEEEEe
Q 044903 270 VVANT-WDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE-VV--KSD-LLKGARHAAAGGGRVCAVC 344 (387)
Q Consensus 270 ~~~~~-W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~-v~--~~~-~~~~~~~~~~~~~~l~v~g 344 (387)
+++.+ =.+++.+.+. +..++..++++|+..+ ++.+.++|+++.+=.. +. ..+ +......+...+|+||+-.
T Consensus 93 ~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~g-s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKD---GWGLATDGKILYGSDG-TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp TTTTEEEEEEECCSSS---CCEEEECSSSEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred CCCCcEEEEEECCCCC---eEEEEECCCEEEEECC-CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEec
Confidence 98653 2233322223 3456666778998874 7799999998864332 22 111 1112233444489999887
Q ss_pred cCCceEEEEEecCC
Q 044903 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~v~d~~~~ 358 (387)
..++.|.++|+.+.
T Consensus 169 ~~~~~V~vID~~tg 182 (266)
T 2iwa_A 169 WQTDCIARISAKDG 182 (266)
T ss_dssp TTSSEEEEEETTTC
T ss_pred CCCCeEEEEECCCC
Confidence 77889999999854
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.09 E-value=0.00025 Score=65.90 Aligned_cols=179 Identities=18% Similarity=0.118 Sum_probs=100.1
Q ss_pred EEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-C-CEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-R-GAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
.+|+.++.+ ..+.+||..+++-...-..... ..+.+.. + ..+|+.++.+. .+.+||..+++
T Consensus 3 ~l~vs~~~d-------~~v~v~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~d~--------~i~v~d~~~~~ 65 (391)
T 1l0q_A 3 FAYIANSES-------DNISVIDVTSNKVTATIPVGSN--PMGAVISPDGTKVYVANAHSN--------DVSIIDTATNN 65 (391)
T ss_dssp EEEEEETTT-------TEEEEEETTTTEEEEEEECSSS--EEEEEECTTSSEEEEEEGGGT--------EEEEEETTTTE
T ss_pred EEEEEcCCC-------CEEEEEECCCCeEEEEeecCCC--cceEEECCCCCEEEEECCCCC--------eEEEEECCCCe
Confidence 456665532 4688899988765442221111 1122222 3 35777765433 78899998887
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CC-EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~ 300 (387)
-...-..+.. ...+.+ +| .||+.+.....+.+||+.+++-...-. .......++.. +..||+
T Consensus 66 ----~~~~~~~~~~------v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~ 132 (391)
T 1l0q_A 66 ----VIATVPAGSS------PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYV 132 (391)
T ss_dssp ----EEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEE
T ss_pred ----EEEEEECCCC------ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEE
Confidence 4333222221 222222 34 466665555789999998875533221 11111233332 335778
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCceeEE-EeCC-eEEEEecCCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+..++.|++||..+.+....... ......++ ..++ .|++.+..++.+.+||+.+.
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~ 190 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EeCCCCEEEEEECCCCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 887789999999988765543221 12222222 2244 56677667788999998754
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.03 E-value=0.00059 Score=63.33 Aligned_cols=179 Identities=15% Similarity=0.079 Sum_probs=98.2
Q ss_pred EEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
.+|+.++.+ ..+.+||..+++....-.... .-...+.. +..||+.+..+ ..+.+||..+++
T Consensus 45 ~l~~~~~~d-------~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~~~~ 107 (391)
T 1l0q_A 45 KVYVANAHS-------NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMAS--------STLSVIDTTSNT 107 (391)
T ss_dssp EEEEEEGGG-------TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTT--------TEEEEEETTTTE
T ss_pred EEEEECCCC-------CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCC--------CEEEEEECCCCe
Confidence 466665432 468899998887654322222 11122222 34566665432 268999999887
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CC-EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~ 300 (387)
-...-..... ...+.+ +| .+|+.+.....+.+||+.+.+....-.. +.....++.. ++.||+
T Consensus 108 ----~~~~~~~~~~------~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 108 ----VAGTVKTGKS------PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV---GRSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp ----EEEEEECSSS------EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---CSSEEEEEECTTSSEEEE
T ss_pred ----EEEEEeCCCC------cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec---CCCcceEEECCCCCEEEE
Confidence 4333222111 122222 44 4767766668999999988765433211 1111223322 346777
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCceeE-EEeCCe-EEEEec--CCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGGR-VCAVCE--NGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~~-l~v~gg--~~~~i~v~d~~~~ 358 (387)
.+..++.|.+||..+.+-..... .......+ ...+|+ |++.+. .+..+.+||+.+.
T Consensus 175 ~~~~~~~v~~~d~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTNSVIDTVK--VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEE--CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred EeCCCCEEEEEECCCCeEEEEEe--cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 87778899999998875443322 11112222 223454 444433 5688999998754
No 37
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.02 E-value=0.0018 Score=60.05 Aligned_cols=198 Identities=10% Similarity=0.061 Sum_probs=113.7
Q ss_pred eEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCC-------CCceeeeEEeeCCEEEEEecCCCCCCCC
Q 044903 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELV-------TPRRWCAAGYSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~-------~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
..++.++.||+.... ..++.||+.|. .|+.-.+.. ........+..++.||+....
T Consensus 48 ~p~v~~~~v~~~~~~--------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~------- 112 (376)
T 3q7m_A 48 HPALADNVVYAADRA--------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEK------- 112 (376)
T ss_dssp CCEEETTEEEEECTT--------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETT-------
T ss_pred ccEEECCEEEEEcCC--------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCC-------
Confidence 455678889887541 36889999876 476532211 122234455678889886432
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC--ceeeccccccCCC-CC
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGW-RG 288 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~-~~ 288 (387)
..+..+|..+++.. |+.-..-. . ....+..++.+|+... ...+.+||++++ .|+.-........ ..
T Consensus 113 --g~l~a~d~~tG~~~--W~~~~~~~--~----~~~p~~~~~~v~v~~~-~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~ 181 (376)
T 3q7m_A 113 --AQVYALNTSDGTVA--WQTKVAGE--A----LSRPVVSDGLVLIHTS-NGQLQALNEADGAVKWTVNLDMPSLSLRGE 181 (376)
T ss_dssp --SEEEEEETTTCCEE--EEEECSSC--C----CSCCEEETTEEEEECT-TSEEEEEETTTCCEEEEEECCC-----CCC
T ss_pred --CEEEEEECCCCCEE--EEEeCCCc--e----EcCCEEECCEEEEEcC-CCeEEEEECCCCcEEEEEeCCCCceeecCC
Confidence 26899999988855 87643211 1 1234566888887543 347999999876 5876543221111 11
Q ss_pred cEEEEeCCeEEEEeCCCCeEEEEeCCCC--ceEEcccccccc--------CceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 289 PVAAMDEEVLYGIDENSCTLSKYDEVMD--DWKEVVKSDLLK--------GARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 289 ~~~~~~~g~ly~~g~~~~~v~~yd~~~~--~W~~v~~~~~~~--------~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+.++.++.+|+ +..++.+..+|+++. .|+.-...+... .....+..++.||+. ..++.++.+|..++
T Consensus 182 ~~~~~~~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~-~~~g~l~~~d~~tG 259 (376)
T 3q7m_A 182 SAPTTAFGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFAL-AYNGNLTALDLRSG 259 (376)
T ss_dssp CCCEEETTEEEE-CCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEE-CTTSCEEEEETTTC
T ss_pred CCcEEECCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEE-ecCcEEEEEECCCC
Confidence 233445777766 445678999998754 576533221100 112233456777766 34567788887632
Q ss_pred CCCceeEEcC
Q 044903 359 AAPTIFVVDT 368 (387)
Q Consensus 359 ~~~~~W~~~~ 368 (387)
...|+...
T Consensus 260 --~~~w~~~~ 267 (376)
T 3q7m_A 260 --QIMWKREL 267 (376)
T ss_dssp --CEEEEECC
T ss_pred --cEEeeccC
Confidence 24577643
No 38
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.01 E-value=0.0007 Score=59.32 Aligned_cols=191 Identities=12% Similarity=-0.013 Sum_probs=104.3
Q ss_pred eeEEE-eCCEEEE-EcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEE
Q 044903 140 VQLVS-LSGKLIL-LAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 140 ~~~~~-~~~~l~v-~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~ 217 (387)
..++. -++.+|+ .... ...+.+||+.+......+..........+..-++++||... . ..+.
T Consensus 27 ~~i~~~~~g~l~v~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~--------~~i~ 90 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-------YGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-N--------NRVV 90 (270)
T ss_dssp EEEEECTTCCEEEEECSS-------SCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-T--------TEEE
T ss_pred cceEECCCCCEEEEccCC-------CCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-C--------CEEE
Confidence 34444 3567888 4331 24678899887765554322111111112222567998865 2 2678
Q ss_pred EEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-
Q 044903 218 KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD- 294 (387)
Q Consensus 218 vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~- 294 (387)
+||+.+.. ...+...... ....+.+ +|++|+.......+.+||..+......... ... ....+++.
T Consensus 91 ~~d~~~~~----~~~~~~~~~~-----~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~-~p~~i~~~~ 159 (270)
T 1rwi_B 91 TLAAGSNN----QTVLPFDGLN-----YPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLN-DPDGVAVDN 159 (270)
T ss_dssp EECTTCSC----CEECCCCSCS-----SEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCC-SCCCEEECT
T ss_pred EEeCCCce----EeeeecCCcC-----CCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCC-CceeEEEeC
Confidence 89988776 4444311101 1122233 678998765556788998766554332211 000 11233433
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+|+||+.+...+.|.+||+++..-...... .......++. -+|.||+....++.+.++|....
T Consensus 160 ~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~ 223 (270)
T 1rwi_B 160 SGNVYVTDTDNNRVVKLEAESNNQVVLPFT-DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST 223 (270)
T ss_dssp TCCEEEEEGGGTEEEEECTTTCCEEECCCS-SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS
T ss_pred CCCEEEEECCCCEEEEEecCCCceEeeccc-CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC
Confidence 578999886678899999987654332211 1122334444 35689998777788999998743
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.01 E-value=0.0011 Score=58.65 Aligned_cols=188 Identities=11% Similarity=0.016 Sum_probs=103.7
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
.++.+|+.+... ...+.+||+..+.-..+...........+..-++++||..... ..+.+||+...
T Consensus 87 ~~g~l~v~~~~~------~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~g~ 152 (286)
T 1q7f_A 87 NSGDIIVTERSP------THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV--------MRVIIFDQNGN 152 (286)
T ss_dssp TTTEEEEEECGG------GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT--------TEEEEECTTSC
T ss_pred CCCeEEEEcCCC------CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC--------CEEEEEcCCCC
Confidence 367888876421 1467889965544333322111111222222357899876432 26788887655
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEE-eCCeEEE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM-DEEVLYG 300 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~-~~g~ly~ 300 (387)
. ...+...... .....+.+ +|.+|+.+.....+.+||+..+.-..+... .....+ .+++ .+|+||+
T Consensus 153 ~----~~~~~~~~~~----~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--g~~~~p~~i~~d~~G~l~v 222 (286)
T 1q7f_A 153 V----LHKFGCSKHL----EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE--GITNYPIGVGINSNGEILI 222 (286)
T ss_dssp E----EEEEECTTTC----SSEEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT--TTSCSEEEEEECTTCCEEE
T ss_pred E----EEEeCCCCcc----CCcEEEEECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC--CccCCCcEEEECCCCCEEE
Confidence 4 3333211100 01122333 589998866567899999866544443321 001122 2333 3578999
Q ss_pred EeCCCC-eEEEEeCCCCceEEccccccccCceeEE-EeCCeEEEEecCCceEEEEEecC
Q 044903 301 IDENSC-TLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 301 ~g~~~~-~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.+...+ .|.+||++...-..+...........++ .-+|++||.. .++.|.+|+...
T Consensus 223 ~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~-~~~~v~v~~~~~ 280 (286)
T 1q7f_A 223 ADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLAS-KDYRLYIYRYVQ 280 (286)
T ss_dssp EECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE-TTTEEEEEECSC
T ss_pred EeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEEC-CCCeEEEEEccc
Confidence 986665 8999998766444443322122223333 3478998884 577899998874
No 40
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.01 E-value=0.003 Score=57.42 Aligned_cols=187 Identities=13% Similarity=-0.024 Sum_probs=99.3
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCC--------CceeeeEEe--eCCEEEEEecCCCCCCCCCCceE
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT--------PRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~--------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
+.+|+.+.. ...++++|+.+.+-...-+... +......+. .++.+|+.+.... ..+
T Consensus 101 ~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-------~~i 166 (353)
T 3vgz_A 101 QTLWFGNTV-------NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-------SVI 166 (353)
T ss_dssp TEEEEEETT-------TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-------CEE
T ss_pred CEEEEEecC-------CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-------ceE
Confidence 447776552 1478999999887533211111 111112222 2456887763221 368
Q ss_pred EEEeCCCCccccCeEEcCCCCCCcccccceeEEEECC-EEEEEeeeCCeEEEEECCCCceee-ccccccCCCC-Cc-EEE
Q 044903 217 EKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWR-GP-VAA 292 (387)
Q Consensus 217 ~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g-~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~-~~-~~~ 292 (387)
.+||+.+.+ -...-+...... ...+..-+| .+|+.+. ...+.+||+.+.+-.. +.. ...+.. .. .++
T Consensus 167 ~~~d~~~~~----~~~~~~~~~~~~---~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~ 237 (353)
T 3vgz_A 167 WVVDGGNIK----LKTAIQNTGKMS---TGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKL-LDDGKEHFFINIS 237 (353)
T ss_dssp EEEETTTTE----EEEEECCCCTTC---CCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEEC-CCSSSCCCEEEEE
T ss_pred EEEcCCCCc----eEEEecCCCCcc---ceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEc-CCCCCCcccceEE
Confidence 999998876 222211111100 011222344 4666543 5688899998764322 111 011111 11 233
Q ss_pred Ee--CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCC-eEEEEecCCceEEEEEecCC
Q 044903 293 MD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
+. ++.+|+.....+.+.+||+++.+.......+.. ......-+| .+|+.+..++.+.++|..+.
T Consensus 238 ~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 238 LDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp EETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 32 556888877678999999988765443332221 222233344 58888767889999998754
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.0015 Score=59.95 Aligned_cols=191 Identities=13% Similarity=0.062 Sum_probs=108.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--C--CEEEEEecCCCCCCCCCCceEEEEeC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--R--GAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~v~vyd~ 221 (387)
++..++.|+.+ ..+.+||.....+..+..+........+..+ + +.+++.|+.+. .+.+||.
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg--------~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 86 (379)
T ss_dssp SSSEEEEEETT-------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEECC-------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC--------EEEEEEc
Confidence 45566666532 3578888876666554333322222222222 2 56667766543 6889999
Q ss_pred CCCccccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe---
Q 044903 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--- 294 (387)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--- 294 (387)
.+++ |..+..+..... ....+.+ + +.+.+.++....+.+||..+..-............-.+++..
T Consensus 87 ~~~~----~~~~~~~~~~~~---~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 87 ENGR----WSQIAVHAVHSA---SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp ETTE----EEEEEEECCCSS---CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred CCCc----eeEeeeecCCCc---ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 9887 776654432211 1233333 2 567777777788999999876322111000001011122222
Q ss_pred -----------CCeEEEEeCCCCeEEEEeCCCC--ceEEccccccccCceeEEE--eC---CeEEEEecCCceEEEEEec
Q 044903 295 -----------EEVLYGIDENSCTLSKYDEVMD--DWKEVVKSDLLKGARHAAA--GG---GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 -----------~g~ly~~g~~~~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~~--~~---~~l~v~gg~~~~i~v~d~~ 356 (387)
++.+++.++.++.|.+||..+. .|..+............+. .+ +++++.++.++.+.+||+.
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 4677778878899999998654 3555544443333332222 34 7888888888999999998
Q ss_pred CC
Q 044903 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
..
T Consensus 240 ~~ 241 (379)
T 3jrp_A 240 NE 241 (379)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 42
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.93 E-value=0.0037 Score=55.24 Aligned_cols=182 Identities=7% Similarity=-0.008 Sum_probs=102.9
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC-CCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~-~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.+|+.... ...+++||+. .+.+... ++ ....-...+.. ++++|+....+ ..+.+||+
T Consensus 66 ~~g~l~v~~~~-------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~d~- 127 (299)
T 2z2n_A 66 SDGEVWFTENA-------ANKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMNG--------NRIGRITD- 127 (299)
T ss_dssp TTSCEEEEETT-------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECT-
T ss_pred CCCCEEEeCCC-------CCeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecCC--------ceEEEECC-
Confidence 36678876532 1357888886 4554432 11 11111222222 57899875432 26788888
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe-CCeE
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVL 298 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~g~l 298 (387)
+++ ...... +.... ......+ +|.+|+.......+..||+ +++...... +.....+ .+++. +|+|
T Consensus 128 ~g~----~~~~~~-~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 128 DGK----IREYEL-PNKGS---YPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKI--PTPASGPVGITKGNDDAL 196 (299)
T ss_dssp TCC----EEEEEC-SSTTC---CEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECTTSSE
T ss_pred CCC----EEEecC-CCCCC---CCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeC--CCCCCcceeEEECCCCCE
Confidence 555 544321 11110 1222233 5789887544468999999 676665421 1111122 33332 4789
Q ss_pred EEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEec
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~ 356 (387)
|+.....+.|.+||+ +.+...+...........++. -+|+||+....++.+.++|+.
T Consensus 197 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 197 WFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred EEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 998766788999999 666665432212223344443 367888886567889999984
No 43
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.93 E-value=0.0025 Score=55.90 Aligned_cols=190 Identities=11% Similarity=-0.026 Sum_probs=113.4
Q ss_pred ceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEE
Q 044903 139 PVQLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 139 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
...+...++.||+..|... .+.++|+.|++-..-- ++..-...+.+..+++||++...+ ..+.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g-------~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~--------~~v~V 120 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG-------TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE--------GLLFT 120 (268)
T ss_dssp EEEEEEETTEEEEEETTTT-------EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS--------CEEEE
T ss_pred cceEEEECCEEEEEcCCCC-------EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC--------CEEEE
Confidence 3456667899999988432 3889999998765422 332222334667789999985433 38899
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCce-eeccccc-cCCC-CCcEEEEeC
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTW-DDMREGM-VRGW-RGPVAAMDE 295 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~-~~~~-~~~~~~~~~ 295 (387)
||+.+.+ = +..++.+. .....+.-+++||+..| ...+..+|+++.+= ..++... +... .-.-+...+
T Consensus 121 ~D~~Tl~----~--~~ti~~~~---eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~d 190 (268)
T 3nok_A 121 WSGMPPQ----R--ERTTRYSG---EGWGLCYWNGKLVRSDG-GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECAN 190 (268)
T ss_dssp EETTTTE----E--EEEEECSS---CCCCEEEETTEEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEET
T ss_pred EECCcCc----E--EEEEeCCC---ceeEEecCCCEEEEECC-CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeC
Confidence 9999876 2 22222211 22344455778888875 57999999988643 2332111 0010 011234458
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEE---cccccc-c--------cCceeEEEe--CCeEEEEecCCceEEEEE
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKE---VVKSDL-L--------KGARHAAAG--GGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~---v~~~~~-~--------~~~~~~~~~--~~~l~v~gg~~~~i~v~d 354 (387)
|+||+-...++.|.+-|+++.+=.. +..+.+ . ...-+++-. ++++||.|..=..++-+.
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 8999877667899999999886443 332210 0 112334433 578888865545555443
No 44
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.88 E-value=0.0017 Score=61.48 Aligned_cols=190 Identities=13% Similarity=0.089 Sum_probs=110.4
Q ss_pred eEEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEe
Q 044903 141 QLVSLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 141 ~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd 220 (387)
.+...++.+++.|+.+ ..+.+||..+.+-... +........+...++..++.|+.+. .+.+||
T Consensus 177 ~~l~~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~dg--------~i~vwd 239 (435)
T 1p22_A 177 LCLQYDERVIITGSSD-------STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKDR--------SIAVWD 239 (435)
T ss_dssp EEEECCSSEEEEEETT-------SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETTS--------CEEEEE
T ss_pred EEEEECCCEEEEEcCC-------CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCCC--------cEEEEe
Confidence 3444577777777643 4678899987764331 1111122223334555666666543 678888
Q ss_pred CCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEE
Q 044903 221 LMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYG 300 (387)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~ 300 (387)
..+... ......+... .....++..++...+.|+.+..+.+||..+.+-...-.... .....+..++.+++
T Consensus 240 ~~~~~~---~~~~~~~~~~---~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---~~v~~~~~~~~~l~ 310 (435)
T 1p22_A 240 MASPTD---ITLRRVLVGH---RAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHK---RGIACLQYRDRLVV 310 (435)
T ss_dssp CSSSSC---CEEEEEECCC---SSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCS---SCEEEEEEETTEEE
T ss_pred CCCCCC---ceeeeEecCC---CCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCC---CcEEEEEeCCCEEE
Confidence 887651 1110101100 11133455577777777777889999998764322111111 11222333566777
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.++.++.|.+||..+.+ .+...........++..+++.++.|+.++.+.+||+...
T Consensus 311 ~g~~dg~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 311 SGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp EEETTSCEEEEETTTCC--EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHH
T ss_pred EEeCCCeEEEEECCCCC--EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCCC
Confidence 77788999999998753 222333333444555668888999888999999998643
No 45
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.85 E-value=0.0022 Score=60.79 Aligned_cols=173 Identities=13% Similarity=0.144 Sum_probs=92.1
Q ss_pred ccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccccc
Q 044903 165 RPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSRE 244 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~ 244 (387)
.+.+||..+.+-.. .+........+...++..++.|+.+. .+.+||..+.+ -...-.... .
T Consensus 260 ~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~----~~~~~~~~~-----~ 320 (445)
T 2ovr_B 260 MVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLDT--------SIRVWDVETGN----CIHTLTGHQ-----S 320 (445)
T ss_dssp CEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETTS--------CEEEEETTTCC----EEEEECCCC-----S
T ss_pred EEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCCC--------eEEEEECCCCC----EEEEEcCCc-----c
Confidence 45667766543222 11111111222333666666666543 68899988876 222111111 1
Q ss_pred ceeEEEECCEEEEEeeeCCeEEEEECCCCcee-eccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEcc-
Q 044903 245 AIDAVGWKGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVV- 322 (387)
Q Consensus 245 ~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~- 322 (387)
...+...++.+.+.|+.+..+.+||..+.+-. .+.. ..........+..++.+++.++.++.|.+||..+.+.....
T Consensus 321 ~v~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 321 LTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG-PNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECS-TTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cEEEEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEcc-CCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 13344456666677777788999999766432 2211 11011112223345677777778899999999887654322
Q ss_pred cc--ccccCc-eeEE-EeCCeEEEEecCCc----eEEEEEecC
Q 044903 323 KS--DLLKGA-RHAA-AGGGRVCAVCENGG----GIVVVDVKA 357 (387)
Q Consensus 323 ~~--~~~~~~-~~~~-~~~~~l~v~gg~~~----~i~v~d~~~ 357 (387)
.. ...... .+++ ..++.++++|+.++ .+.++|...
T Consensus 400 ~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 400 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp ECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred ccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 11 112222 2233 23556666766554 499999884
No 46
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.83 E-value=0.0057 Score=53.69 Aligned_cols=184 Identities=7% Similarity=-0.073 Sum_probs=107.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.||+.... ...++++|+.+..-..+.+...... ...+. .++.||++... ...+.++|+..
T Consensus 47 ~~~ly~~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~p-~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g 110 (267)
T 1npe_A 47 DKVVYWTDIS-------EPSIGRASLHGGEPTTIIRQDLGSP-EGIALDHLGRTIFWTDSQ--------LDRIEVAKMDG 110 (267)
T ss_dssp TTEEEEEETT-------TTEEEEEESSSCCCEEEECTTCCCE-EEEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred CCEEEEEECC-------CCEEEEEecCCCCcEEEEECCCCCc-cEEEEEecCCeEEEEECC--------CCEEEEEEcCC
Confidence 5788887542 2578999998765433221111111 22222 36799998543 23788888875
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeee--CCeEEEEECCCCceeeccccccCCCCCc-EEEEe--CC
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVK--GAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--EE 296 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~--~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~g 296 (387)
.. -+.+...... .+ ...++- ++.||+.... ...+.++++....-+.+.. .+...+ .+++. ++
T Consensus 111 ~~----~~~~~~~~~~-~P---~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~---~~~~~P~gia~d~~~~ 179 (267)
T 1npe_A 111 TQ----RRVLFDTGLV-NP---RGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ---DNLGLPNGLTFDAFSS 179 (267)
T ss_dssp CS----CEEEECSSCS-SE---EEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEEC---TTCSCEEEEEEETTTT
T ss_pred CC----EEEEEECCCC-Cc---cEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEE---CCCCCCcEEEEcCCCC
Confidence 54 3333211101 11 222332 6899998654 3578888886543232221 111122 23332 57
Q ss_pred eEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 297 VLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+||+.....+.|.++|+++..-..+.. ....+.+++..++.||+....++.+.++|..++
T Consensus 180 ~lyv~d~~~~~I~~~~~~g~~~~~~~~--~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 180 QLCWVDAGTHRAECLNPAQPGRRKVLE--GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp EEEEEETTTTEEEEEETTEEEEEEEEE--CCCSEEEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCEEEEEecCCCceEEEec--CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCC
Confidence 899998777899999997643222221 223345666678999999777889999999854
No 47
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.81 E-value=0.002 Score=57.05 Aligned_cols=187 Identities=11% Similarity=0.089 Sum_probs=104.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC--CC--ceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV--TP--RRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~--~~--r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
.++.+|+..... ..+.+||+..+....++... .. ..-...+. -++++||.+.... ..+.+
T Consensus 39 ~~g~l~v~~~~~-------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~-------~~i~~ 104 (286)
T 1q7f_A 39 AQNDIIVADTNN-------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT-------HQIQI 104 (286)
T ss_dssp TTCCEEEEEGGG-------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG-------CEEEE
T ss_pred CCCCEEEEECCC-------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC-------CEEEE
Confidence 356788875421 46788998855444433211 00 11122333 3678999864311 26788
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe-
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD- 294 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~- 294 (387)
||..... -..+...... ....+. -+|++|+.+.....+.+||+....-..+... .....+ .+++.
T Consensus 105 ~d~~g~~----~~~~~~~~~~-----~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 105 YNQYGQF----VRKFGATILQ-----HPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS--KHLEFPNGVVVND 173 (286)
T ss_dssp ECTTSCE----EEEECTTTCS-----CEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECT--TTCSSEEEEEECS
T ss_pred ECCCCcE----EEEecCccCC-----CceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCC--CccCCcEEEEECC
Confidence 8855443 3333211111 012222 3678998865557899999876544443211 111122 23332
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCc-eEEEEEec
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGG-GIVVVDVK 356 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~-~i~v~d~~ 356 (387)
+|++|+.+...+.|.+||++.+....+...........++. -+|+|||....++ .+.+||..
T Consensus 174 ~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 174 KQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp SSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred CCCEEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 47899988767899999997765444433222223333443 4788999876665 89999876
No 48
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.81 E-value=0.0057 Score=54.03 Aligned_cols=183 Identities=8% Similarity=-0.032 Sum_probs=103.2
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.++.+|+.... ...+.+||+. +++...............+. -++++|+..... ..+..||+.
T Consensus 71 ~~g~l~v~~~~-------~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~~~~~- 133 (300)
T 2qc5_A 71 SLGDIWFTENG-------ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNG--------DRIGKLTAD- 133 (300)
T ss_dssp TTSCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTT--------TEEEEECTT-
T ss_pred CCCCEEEEecC-------CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCC--------CeEEEECCC-
Confidence 35678886431 2468899988 66654321111111222222 367899875432 267888887
Q ss_pred CccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe-CCeEE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-EEVLY 299 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-~g~ly 299 (387)
++ ..... ++.... ....+. -+|++|+.......+..||+ +++...... +.....+ .+++. +|.||
T Consensus 134 g~----~~~~~-~~~~~~---~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~d~~g~l~ 202 (300)
T 2qc5_A 134 GT----IYEYD-LPNKGS---YPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPL--PTNAAAPVGITSGNDGALW 202 (300)
T ss_dssp SC----EEEEE-CSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECTTSSEE
T ss_pred CC----EEEcc-CCCCCC---CceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeC--CCCCCCcceEEECCCCCEE
Confidence 55 54332 121111 112222 35788887644568999998 666655431 1111222 23332 57899
Q ss_pred EEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEec
Q 044903 300 GIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.....+.|.+||+ +..+..+...........++. -+|+||+....++.+..+|+.
T Consensus 203 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 203 FVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp EEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred EEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 98766778999999 555655432222222334443 367899887667889999885
No 49
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.80 E-value=0.01 Score=55.52 Aligned_cols=184 Identities=10% Similarity=-0.033 Sum_probs=111.0
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCC--CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP--ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~--~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.||+..-. ...++++++.....+.+. .+..+. ..+....+++||+.-... ..++++++.
T Consensus 126 ~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~--------~~I~~~~~d 189 (386)
T 3v65_B 126 RRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGT--------SRIEVANLD 189 (386)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTT--------TEEEECBTT
T ss_pred CCCeEEEEeCC-------CCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCC--------CeEEEEeCC
Confidence 36788887532 257889999887665542 222222 122223478999985432 367888876
Q ss_pred CCccccCeEEcC--CCCCCcccccceeEEE--ECCEEEEEeeeC-CeEEEEECCCCceeec-cccccCCCCCcEEEE--e
Q 044903 223 NGEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDM-REGMVRGWRGPVAAM--D 294 (387)
Q Consensus 223 t~~~~~~W~~~~--~~~~~~~~~~~~~~v~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~-~~~~~~~~~~~~~~~--~ 294 (387)
... -..+. .+..| ...++ .+|.||+..... ..|+.+|+....=+.+ ...+.. ...+++ .
T Consensus 190 g~~----~~~l~~~~l~~P------~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~---PnGlavd~~ 256 (386)
T 3v65_B 190 GAH----RKVLLWQSLEKP------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFW---PNGLTIDYA 256 (386)
T ss_dssp SCS----CEEEECSSCSCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC---EEEEEEEGG
T ss_pred CCc----eEEeecCCCCCC------cEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCC---eeeEEEeCC
Confidence 554 33322 12211 22233 268999986544 7899999875433222 121111 123444 4
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++||+.+...+.|+++|.+...=+.+... ....+.+++..++.||+....+..|..+|..++
T Consensus 257 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 257 GRRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp GTEEEEEETTTTEEEEECTTSCSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEeCCCCeeEEEEEC-CCCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 789999998788999999876433333221 133456777789999999877889999995434
No 50
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.77 E-value=0.024 Score=52.15 Aligned_cols=184 Identities=10% Similarity=-0.024 Sum_probs=112.0
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCC--CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGP--ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~--~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.||+..-. ...++++++.....+.+. .+..+. ..+....+++||+.-.. ...++++++.
T Consensus 83 ~~~~ly~~D~~-------~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~--------~~~I~~~~~d 146 (349)
T 3v64_C 83 RRELVFWSDVT-------LDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSG--------TSRIEVANLD 146 (349)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred cccEEEEEecc-------CCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCC--------CCeEEEEcCC
Confidence 46788887532 256888998877655532 222222 12222247899998543 2378888887
Q ss_pred CCccccCeEEcC--CCCCCcccccceeEEE--ECCEEEEEeeeC-CeEEEEECCCCceeeccccccCCCCCc-EEEE--e
Q 044903 223 NGEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGP-VAAM--D 294 (387)
Q Consensus 223 t~~~~~~W~~~~--~~~~~~~~~~~~~~v~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~--~ 294 (387)
... -..+. .+..| ...++ .+|.||+..... ..|+.+|+....-+.+-. .+...+ .+++ .
T Consensus 147 G~~----~~~l~~~~l~~P------~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGla~d~~ 213 (349)
T 3v64_C 147 GAH----RKVLLWQSLEKP------RAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYA 213 (349)
T ss_dssp SCS----CEEEECTTCSCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC---SSCSCEEEEEEETT
T ss_pred CCc----eEEEEeCCCCCc------ceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE---CCCCCcceEEEeCC
Confidence 654 33332 22211 22233 268999986555 789999987543333321 111122 3444 3
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++||+.+...+.|.++|++...=+.+... ....+.+++..++.||+.......|..+|..++
T Consensus 214 ~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~-~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 214 GRRMYWVDAKHHVIERANLDGSHRKAVISQ-GLPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEeCCCCceEEEEeC-CCCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 789999998778999999876433333221 133456777789999999877889999985434
No 51
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.76 E-value=0.0033 Score=55.66 Aligned_cols=184 Identities=10% Similarity=0.077 Sum_probs=103.2
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCC-CceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT-PRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.++.+|+.... ...+.+||+. .+....+.... ......+..-++++|+..... ..+..||+.
T Consensus 29 ~~g~l~v~~~~-------~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~v~~~d~~- 91 (300)
T 2qc5_A 29 EDGKVWFTQHK-------ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGA--------NKIGKLSKK- 91 (300)
T ss_dssp TTSCEEEEETT-------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--------TEEEEECTT-
T ss_pred CCCCEEEEcCC-------CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCC--------CeEEEECCC-
Confidence 35778886531 2467889988 66665321111 111111222357888875422 267889988
Q ss_pred CccccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEE-eCCeEEE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM-DEEVLYG 300 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~-~~g~ly~ 300 (387)
++ +.... ++.... .....+. -+|.+|+.+.....+..||++ ++...... +.....+ .+++ .+|+||+
T Consensus 92 g~----~~~~~-~~~~~~--~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--~~~~~~~~~i~~d~~g~l~v 161 (300)
T 2qc5_A 92 GG----FTEYP-LPQPDS--GPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDL--PNKGSYPAFITLGSDNALWF 161 (300)
T ss_dssp SC----EEEEE-CSSTTC--CEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEEC--SSTTCCEEEEEECTTSSEEE
T ss_pred CC----eEEec-CCCCCC--CCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccC--CCCCCCceeEEECCCCCEEE
Confidence 66 65443 111111 1122222 268898876545689999987 65554321 1111122 2333 3578999
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEec
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~ 356 (387)
.....+.|++||+ +.+...+...........++. -+|.||+....+..+.++|..
T Consensus 162 ~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 217 (300)
T 2qc5_A 162 TENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT 217 (300)
T ss_dssp EETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred EecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC
Confidence 8766788999999 566665432222222333443 367898886666778888874
No 52
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.76 E-value=0.0053 Score=54.24 Aligned_cols=188 Identities=7% Similarity=-0.042 Sum_probs=103.5
Q ss_pred eEEEe-CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEE
Q 044903 141 QLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 141 ~~~~~-~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
.++.. ++.+|+.... ...++++|+ +++................+. -++++|+..... ..+.+
T Consensus 103 ~i~~~~~g~l~v~~~~-------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--------~~i~~ 166 (299)
T 2z2n_A 103 GITEGPNGDIWFTEMN-------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQN--------NAIGR 166 (299)
T ss_dssp EEEECTTSCEEEEETT-------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTT--------TEEEE
T ss_pred eeEECCCCCEEEEecC-------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCC--------CEEEE
Confidence 34443 5778886532 246788998 666554321111111122222 256888865321 36788
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEE-e
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM-D 294 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~-~ 294 (387)
||+ +++ ..... .+.... ......+ +|.+|+.......+..||+ +++...... +.....+ .+++ .
T Consensus 167 ~~~-~g~----~~~~~-~~~~~~---~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~--~~~~~~~~~i~~~~ 234 (299)
T 2z2n_A 167 ITE-SGD----ITEFK-IPTPAS---GPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKI--PTPNARPHAITAGA 234 (299)
T ss_dssp ECT-TCC----EEEEE-CSSTTC---CEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEEC--SSTTCCEEEEEECS
T ss_pred EcC-CCc----EEEee-CCCCCC---cceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEEC--CCCCCCceeEEECC
Confidence 998 666 65542 111111 1223333 5788887654568999999 777665422 1111122 3333 2
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+|+||+.....+.|.+||++ .....+..........+++..+|.||+... ++.+..+|+.+.
T Consensus 235 ~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLTSN-NIIEEYPIQIKSAEPHGICFDGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp TTCEEEEETTTTEEEEEETT-TEEEEEECSSSSCCEEEEEECSSCEEEEET-TTEEEEEEEC--
T ss_pred CCCEEEeccCCceEEEECCC-CceEEEeCCCCCCccceEEecCCCEEEEec-CCcEEEEEcCcc
Confidence 57899887667889999994 444443221112223344446788888754 678999998743
No 53
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.76 E-value=0.0017 Score=61.11 Aligned_cols=185 Identities=11% Similarity=-0.020 Sum_probs=101.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC---CCceeeeEE--eeCCEEEEEecCCCCCCCCCCceEEEEe
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV---TPRRWCAAG--YSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~---~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~v~vyd 220 (387)
++.+++.++.+ ..+.+||+.+.+.....+.. ......... .-++++++.++.+. .+.+||
T Consensus 133 ~~~~~~~~~~~-------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~--------~v~~~d 197 (433)
T 3bws_A 133 NTRLAIPLLED-------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQAN--------AVHVFD 197 (433)
T ss_dssp SSEEEEEBTTS-------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGT--------EEEEEE
T ss_pred CCeEEEEeCCC-------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCC--------EEEEEE
Confidence 66777776532 35899999988876543321 111122222 23678888877543 788999
Q ss_pred CCCCccccCeEEcCCCCCCcccccceeEEEE-CC-EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCC-
Q 044903 221 LMNGEKNSRWEKTGELKDGRFSREAIDAVGW-KG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEE- 296 (387)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~-~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g- 296 (387)
..+.+ -...-...... ....+.. ++ .+|+.+.....+.+||+.+.+....-.. ......++. .++
T Consensus 198 ~~~~~----~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~ 266 (433)
T 3bws_A 198 LKTLA----YKATVDLTGKW----SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGK 266 (433)
T ss_dssp TTTCC----EEEEEECSSSS----EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSS
T ss_pred CCCce----EEEEEcCCCCC----eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCC
Confidence 98876 32211111110 0122222 33 5666665567899999987755332211 111112222 234
Q ss_pred eEEEEeC-------CCCeEEEEeCCCCceEEccccccccCceeE-EEeCC-eEEEEecCCceEEEEEecCC
Q 044903 297 VLYGIDE-------NSCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~g~-------~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
.|++.+. .++.|++||+.+.+-......+. ....+ ...++ .+|+.+..++.+.+||..+.
T Consensus 267 ~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 267 ELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp EEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--CEEEEEECSSTTEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--CcceEEECCCCCEEEEEecCCCEEEEEECCCC
Confidence 4555442 35689999998775433321111 11222 22344 68888778889999999843
No 54
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.76 E-value=0.022 Score=51.51 Aligned_cols=184 Identities=11% Similarity=0.002 Sum_probs=107.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCC----Cceee-CC-CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPIC----RTWTF-GP-ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t----~~W~~-l~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
++.||+.... ...++++|+.+ ..-.. ++ .+..+. ..+....+++||++-.. ...++++
T Consensus 41 ~~~ly~~D~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~--------~~~I~~~ 104 (316)
T 1ijq_A 41 SNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSV--------LGTVSVA 104 (316)
T ss_dssp TTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEE
T ss_pred CCEEEEEECC-------CCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECC--------CCEEEEE
Confidence 5789988642 25688888876 22222 21 222222 11222247899998543 2378889
Q ss_pred eCCCCccccCeEEcC--CCCCCcccccceeEEE--ECCEEEEEeeeC-CeEEEEECCCCceeeccccccCCCCCc-EEEE
Q 044903 220 DLMNGEKNSRWEKTG--ELKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGP-VAAM 293 (387)
Q Consensus 220 d~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~ 293 (387)
|+.... -+.+. .+..+ ...++ .+|.||+..... ..|+++++....=+.+... ....+ .+++
T Consensus 105 ~~~g~~----~~~~~~~~~~~P------~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---~~~~P~gla~ 171 (316)
T 1ijq_A 105 DTKGVK----RKTLFRENGSKP------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGITL 171 (316)
T ss_dssp ETTSSS----EEEEEECTTCCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEEE
T ss_pred eCCCCc----eEEEEECCCCCc------ceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---CCCCceEEEE
Confidence 987654 33322 12211 22233 368999886433 6899999865433322110 11122 3444
Q ss_pred e--CCeEEEEeCCCCeEEEEeCCCCceEEcccc-ccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 294 D--EEVLYGIDENSCTLSKYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
. +++||+.+...+.|.++|.+...=+.+... .....+.+++..++.||+.-..++.|..+|..++
T Consensus 172 d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 172 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred eccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCC
Confidence 3 689999998778999999976543343322 2234456777789999999777889999998644
No 55
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.70 E-value=0.00062 Score=64.17 Aligned_cols=177 Identities=11% Similarity=0.097 Sum_probs=97.0
Q ss_pred ccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 165 RPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
.++++|+.+.+++.+..++......+.+.. ++++++.++.+. .+.+||..+++ ..............
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~--------~i~~~d~~~g~----~~~~~~~~~~~~~~ 169 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDE--------GMDVLDINSGQ----TVRLSPPEKYKKKL 169 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTSS--------SEEEEETTTCC----EEEECCCHHHHTTC
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCCC--------eEEEEECCCCe----EeeecCcccccccC
Confidence 678888887766655443322211112222 677888776533 58999999887 55433221100000
Q ss_pred cceeEEEE--CCEEEEEeeeCCeEEEEECCCCceee-ccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCce
Q 044903 244 EAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDW 318 (387)
Q Consensus 244 ~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W 318 (387)
.....+.+ ++++++.++....+.+||+.+.+-.. +.. .+.....++.. ++.+|+.+..++.|.+||+.+.+.
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL---TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC---SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC---CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 11223333 78888887777899999998764332 221 11111223332 446777777788999999987755
Q ss_pred EEccccccccCceeEEE-eCCeEEEEec--------CCceEEEEEecCC
Q 044903 319 KEVVKSDLLKGARHAAA-GGGRVCAVCE--------NGGGIVVVDVKAA 358 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~~-~~~~l~v~gg--------~~~~i~v~d~~~~ 358 (387)
..... .......++. .+|+.+++++ .++.+.+||+.+.
T Consensus 247 ~~~~~--~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 247 IRKTD--KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEECC--CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEec--CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 43222 2122222222 3454444443 2457888888743
No 56
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.67 E-value=0.0032 Score=56.60 Aligned_cols=181 Identities=12% Similarity=0.053 Sum_probs=99.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+....-.............-+++.++.++.+. .+.+||..+.+
T Consensus 152 ~~~~l~~~~~d-------g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i~~~d~~~~~ 216 (337)
T 1gxr_A 152 DSKVCFSCCSD-------GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN--------TVRSWDLREGR 216 (337)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTE
T ss_pred CCCEEEEEeCC-------CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCC--------cEEEEECCCCc
Confidence 55566666532 4578999987754432111111111111122556666666433 68899988876
Q ss_pred cccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g 302 (387)
-...-..+.+ ...+. -+++++++++....+.+||..+..=..+.. ... .-..++. .++++++.+
T Consensus 217 ----~~~~~~~~~~------v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~l~~~ 283 (337)
T 1gxr_A 217 ----QLQQHDFTSQ------IFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL--HES-CVLSLKFAYCGKWFVST 283 (337)
T ss_dssp ----EEEEEECSSC------EEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC--CSS-CEEEEEECTTSSEEEEE
T ss_pred ----eEeeecCCCc------eEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC--Ccc-ceeEEEECCCCCEEEEe
Confidence 3222222211 12222 356677777766789999998764332221 111 1112222 246677777
Q ss_pred CCCCeEEEEeCCCCceEEccccccccCceeE-EEeCCeEEEEecCCceEEEEEec
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.++.+.+||.++.+-.... ........+ ...+++.++.++.++.+.+||+.
T Consensus 284 ~~dg~i~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred cCCCcEEEEECCCCeEEEEe--cCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 77899999999877544221 111111222 23467788887888889998863
No 57
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.66 E-value=0.01 Score=53.02 Aligned_cols=188 Identities=12% Similarity=0.089 Sum_probs=99.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+++.|+.+ ..+.+||..+.+-...-.-...........-++++++.|+.+. .+.+||..+.+
T Consensus 76 ~~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~ 140 (312)
T 4ery_A 76 DSNLLVSASDD-------KTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDE--------SVRIWDVKTGK 140 (312)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTCC
T ss_pred CCCEEEEECCC-------CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCCCE
Confidence 55666666532 4678889887653321000111111111122456666666543 68899988776
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g 302 (387)
-...-.... .....+.+ ++.+++.++....+.+||..+.+-...-.. ........++ ..+++.++.+
T Consensus 141 ----~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 210 (312)
T 4ery_A 141 ----CLKTLPAHS-----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID-DDNPPVSFVKFSPNGKYILAA 210 (312)
T ss_dssp ----EEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-SSCCCEEEEEECTTSSEEEEE
T ss_pred ----EEEEecCCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec-cCCCceEEEEECCCCCEEEEE
Confidence 322111111 11222333 567777777778899999987654321110 0010011122 2345666677
Q ss_pred CCCCeEEEEeCCCCceEEccccccc--cC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLL--KG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~--~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.|.+||..+.+-......... .. .......++++++.|+.++.+.+||+.+.
T Consensus 211 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 211 TLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp ETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred cCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 7789999999987643222111111 11 12222346778888778899999999855
No 58
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.65 E-value=0.0038 Score=57.04 Aligned_cols=192 Identities=13% Similarity=0.120 Sum_probs=104.6
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCcee-eeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRW-CAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
-++.+++.|+.+ ..+.+||..+.++..+..+...... .+.+. -++++++.|+.+. .+.+||..
T Consensus 18 ~~~~~l~~~~~d-------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg--------~i~vwd~~ 82 (372)
T 1k8k_C 18 KDRTQIAICPNN-------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDR--------NAYVWTLK 82 (372)
T ss_dssp TTSSEEEEECSS-------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTS--------CEEEEEEE
T ss_pred CCCCEEEEEeCC-------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCC--------eEEEEECC
Confidence 356667776532 4688999998876654443322211 12222 2466666666533 67889988
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCc-eeeccccc-cCCCCCcEEEE-eCCe
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT-WDDMREGM-VRGWRGPVAAM-DEEV 297 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~-~~~~~~~~~~~-~~g~ 297 (387)
+.+ +.....+.... .....+.+ ++++++.++....+.+||..+.. |....... .....-.+++. .++.
T Consensus 83 ~~~----~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 83 GRT----WKPTLVILRIN---RAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp TTE----EEEEEECCCCS---SCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred CCe----eeeeEEeecCC---CceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 887 66543222111 11223333 56666776666788888887653 43322111 11111122232 2566
Q ss_pred EEEEeCCCCeEEEEeCCCC----------------ceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 298 LYGIDENSCTLSKYDEVMD----------------DWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 298 ly~~g~~~~~v~~yd~~~~----------------~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++.++.++.+.+||.... .-+.+............+ ..+++.++.++.++.+.+||..+.
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 7777778899999996421 111222222222222222 236778888778888999999754
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.65 E-value=0.0077 Score=54.57 Aligned_cols=198 Identities=13% Similarity=0.013 Sum_probs=98.4
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCcc
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~ 226 (387)
+.+|+....... ......++++|+.+.+-...-+....-...+...-++.+|+.+..+. .+.+||+.+.+
T Consensus 53 ~~l~~~~~~~~~-~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~--------~v~~~d~~~~~- 122 (353)
T 3vgz_A 53 NALWLATSQSRK-LDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNS--------AVTAIDAKTGE- 122 (353)
T ss_dssp TEEEEEECCCTT-TEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTT--------EEEEEETTTCC-
T ss_pred CEEEEEcCCCcC-CCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCC--------EEEEEeCCCCe-
Confidence 467665532110 01135789999998865442222111111112222345888765432 78999999887
Q ss_pred ccCeEEcCCCCCCcc----cccceeEEEE--C-CEEEEEee-eCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeE
Q 044903 227 NSRWEKTGELKDGRF----SREAIDAVGW--K-GKLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVL 298 (387)
Q Consensus 227 ~~~W~~~~~~~~~~~----~~~~~~~v~~--~-g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~l 298 (387)
-...-+.+.... .......+.+ + +.+|+.+. ....+.+||+.+.+-...-........+....-.++.+
T Consensus 123 ---~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 123 ---VKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp ---EEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred ---eEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 322211211100 0000112222 4 45777663 34679999998764322111011111122222234456
Q ss_pred EEEeCCCCeEEEEeCCCCceEEcccccc--ccC-ceeEE-Ee-CCeEEEEecCCceEEEEEecCC
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKSDL--LKG-ARHAA-AG-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~~~--~~~-~~~~~-~~-~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
|+.. .++.+.+||+++.+-......+. ... ...++ .- ++.+|+.+..++.+.++|+.+.
T Consensus 200 ~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~ 263 (353)
T 3vgz_A 200 YTTN-ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNG 263 (353)
T ss_dssp EEEC-TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTC
T ss_pred EEEc-CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCC
Confidence 6664 47889999998775433222211 111 12222 22 4557777666789999999754
No 60
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.64 E-value=0.039 Score=51.79 Aligned_cols=191 Identities=12% Similarity=0.026 Sum_probs=110.6
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCC----ceeeC-C-CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICR----TWTFG-P-ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~----~W~~l-~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
.++.||+.... ...++++++... ....+ . .+..+. ..+....+++||++-.. ...+++
T Consensus 122 ~~~~lywsD~~-------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~--------~~~I~~ 185 (400)
T 3p5b_L 122 ASNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSV--------LGTVSV 185 (400)
T ss_dssp TTTEEEEEETT-------TTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETT--------TTEEEE
T ss_pred ccCceEEEecC-------CCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECC--------CCeEEE
Confidence 36789987542 246778887652 22222 2 121111 12222247899998543 237888
Q ss_pred EeCCCCccccCeEEcCC--CCCCcccccceeEEE--ECCEEEEEeee-CCeEEEEECCCCceeec-cccccCCCCCc-EE
Q 044903 219 WDLMNGEKNSRWEKTGE--LKDGRFSREAIDAVG--WKGKLCLVNVK-GAEGAVYDVVANTWDDM-REGMVRGWRGP-VA 291 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~--~~~~~~~~~~~~~v~--~~g~lyv~gg~-~~~i~~yD~~~~~W~~~-~~~~~~~~~~~-~~ 291 (387)
+|+.... -..+.. +..| ...++ .+|.||+.... ...|+.+++....=+.+ ...+ ..+ .+
T Consensus 186 ~~~~g~~----~~~l~~~~~~~P------~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l----~~P~gl 251 (400)
T 3p5b_L 186 ADTKGVK----RKTLFRENGSKP------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI----QWPNGI 251 (400)
T ss_dssp ECTTTCS----EEEEEECSSCCE------EEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSC----SCEEEE
T ss_pred EeCCCCc----eEEEEeCCCCCc------ceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCC----CceEEE
Confidence 9888765 444321 1111 12223 36899988632 36889998865322222 1111 112 33
Q ss_pred EEe--CCeEEEEeCCCCeEEEEeCCCCceEEcccc-ccccCceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeE
Q 044903 292 AMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFV 365 (387)
Q Consensus 292 ~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~ 365 (387)
++. +++||+.+.....|.++|.+...-+.+... .....+++++..++.||+.-..+..|..+|..++..-..+.
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 252 TLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE
T ss_pred EEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe
Confidence 433 689999998778999999986544444332 23445678888999999997777889999965443333343
No 61
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.62 E-value=0.017 Score=53.80 Aligned_cols=189 Identities=8% Similarity=0.004 Sum_probs=99.8
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
.++..++.|+.+ ..+.+||..+.+-...-..........+..-++++++.|+.+. .+.+||..+.
T Consensus 107 ~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~--------~i~iwd~~~~ 171 (420)
T 3vl1_A 107 LQMRRFILGTTE-------GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDM--------QLKIWSVKDG 171 (420)
T ss_dssp SSSCEEEEEETT-------SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTC
T ss_pred cCCCEEEEEECC-------CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCC--------eEEEEeCCCC
Confidence 466777777632 4678899887665443211111111111122456666666543 6889998876
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCcee-eccccccCCCCCcEEE---------
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWRGPVAA--------- 292 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~--------- 292 (387)
+. -..+..... ...++.+ ++.+.+.++.+..+.+||..+.+-. .+.........-.+++
T Consensus 172 ~~---~~~~~~h~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 242 (420)
T 3vl1_A 172 SN---PRTLIGHRA------TVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQL 242 (420)
T ss_dssp CC---CEEEECCSS------CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSC
T ss_pred cC---ceEEcCCCC------cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCccee
Confidence 51 111111111 1222222 5666667776678999999876422 1111000000000111
Q ss_pred -------------EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCe-EEEEecCCceEEEEEec
Q 044903 293 -------------MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 293 -------------~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~-l~v~gg~~~~i~v~d~~ 356 (387)
..++++.+.+..++.|.+||..+..-..... .........+ ..++. +++.|+.++.+.+||+.
T Consensus 243 ~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 243 HEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLP-SKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp GGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEEC-CTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETT
T ss_pred eecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcc-cccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcC
Confidence 1256677777788999999997764222111 1122222222 23455 88888888999999998
Q ss_pred CC
Q 044903 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
+.
T Consensus 322 ~~ 323 (420)
T 3vl1_A 322 SP 323 (420)
T ss_dssp CT
T ss_pred CC
Confidence 54
No 62
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.61 E-value=0.0085 Score=53.20 Aligned_cols=190 Identities=8% Similarity=0.022 Sum_probs=107.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCc--eeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRT--WTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~--W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.+.+++.+.. ...+.++|+.|.+ |+.-..-. .........-++++++.+ . ..+..||+ +
T Consensus 4 ~~~~lv~~~~-------~~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~--~--------~~V~~~d~-~ 64 (276)
T 3no2_A 4 PQHLLVGGSG-------WNKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY--S--------KGAKMITR-D 64 (276)
T ss_dssp CCEEEEECTT-------CSEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC--B--------SEEEEECT-T
T ss_pred CCcEEEeeCC-------CCEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC--C--------CCEEEECC-C
Confidence 3566666542 2567888987774 66532211 122333444577888832 1 25889999 6
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeee-CCeEEEEECCCC-ceeec-cccc--cCCCCCcEEEEeCCeE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-GAEGAVYDVVAN-TWDDM-REGM--VRGWRGPVAAMDEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~-~~~i~~yD~~~~-~W~~~-~~~~--~~~~~~~~~~~~~g~l 298 (387)
++.. |+.-.+..... ......-+|++++.... ...++.+|++-+ .|+.. .... ............+|.+
T Consensus 65 G~~~--W~~~~~~~~~~----~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 65 GREL--WNIAAPAGCEM----QTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp SCEE--EEEECCTTCEE----EEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCE
T ss_pred CCEE--EEEcCCCCccc----cccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCE
Confidence 6544 77554211110 12233347777776554 467888888544 45432 1111 0011112234456777
Q ss_pred EEEeCCCCeEEEEeCCCC-ceEEccccccccCce-eEEEeCCeEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 299 YGIDENSCTLSKYDEVMD-DWKEVVKSDLLKGAR-HAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~-~W~~v~~~~~~~~~~-~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
++....++.|.+||++.+ .|+.-.. ...+ ..+..+|.++|.+..++.++.+|+.++ ...|++
T Consensus 139 lv~~~~~~~v~~~d~~G~~~w~~~~~----~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG--~~~w~~ 202 (276)
T 3no2_A 139 LVPLFATSEVREIAPNGQLLNSVKLS----GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN--RIVRRV 202 (276)
T ss_dssp EEEETTTTEEEEECTTSCEEEEEECS----SCCCEEEECTTSCEEEECBTTSEEEEECTTTC--CEEEEE
T ss_pred EEEecCCCEEEEECCCCCEEEEEECC----CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC--cEEEEe
Confidence 777777789999999744 4654322 1122 334457889998777778999998832 257887
No 63
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.60 E-value=0.003 Score=57.77 Aligned_cols=189 Identities=9% Similarity=0.038 Sum_probs=96.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC-CCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++..++.|+.+ ..+.+||..++++.....+. ....-.+.+. -+++.++.|+.+. .+.+||..+
T Consensus 63 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~ 127 (372)
T 1k8k_C 63 DSNRIVTCGTD-------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQ 127 (372)
T ss_dssp TTTEEEEEETT-------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEET
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecC
Confidence 56666666532 46788999888765532221 1111111222 2456666666433 467777666
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCC---------ceee-------ccccccCC
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVAN---------TWDD-------MREGMVRG 285 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~---------~W~~-------~~~~~~~~ 285 (387)
... |........+.. .....+.+ ++.+++.++....+.+||.... .|.. +.......
T Consensus 128 ~~~---~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (372)
T 1k8k_C 128 END---WWVCKHIKKPIR--STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC 202 (372)
T ss_dssp TTT---EEEEEEECTTCC--SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS
T ss_pred CCc---ceeeeeeecccC--CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC
Confidence 541 332221111100 11222333 5667777776778999996421 1111 11000000
Q ss_pred CCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCc--eeEEEeCCeEEEEecCCceEEEEEecC
Q 044903 286 WRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 286 ~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
..-.+++. .++..++.++.++.|.+||..+.+-.. ........ ......++++++.| .++.+.+||...
T Consensus 203 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 203 GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA--TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE--EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE--EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 01112222 255666677778999999998765322 22222222 22334477777665 788899999986
No 64
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.59 E-value=0.0018 Score=66.19 Aligned_cols=191 Identities=13% Similarity=0.066 Sum_probs=108.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--C--CEEEEEecCCCCCCCCCCceEEEEeC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--R--GAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~v~vyd~ 221 (387)
++..++.|+.+ ..+.+||..+.++..+..+........+..+ + +..++.|+.+. .+.+||.
T Consensus 20 dg~~latg~~d-------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg--------~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVLIWKE 84 (753)
T ss_dssp SSCCEEEEETT-------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTS--------CEEEEEE
T ss_pred CCCeEEEEECC-------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCC--------eEEEEEC
Confidence 45555555532 3577888876666655443322222222222 2 56777776644 6889999
Q ss_pred CCCccccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe---
Q 044903 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--- 294 (387)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--- 294 (387)
.+++ |..+..+.... .....+.+ + +.+++.|+.+..+.+||..+..-............-.+++..
T Consensus 85 ~~~~----~~~~~~~~~h~---~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 85 ENGR----WSQIAVHAVHS---ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp ETTE----EEEEEEECCCS---SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred CCCc----ccccccccCCC---CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 8887 76665443221 11233333 2 667777777789999999776322111000000011122222
Q ss_pred -----------CCeEEEEeCCCCeEEEEeCCCC--ceEEccccccccCceeEEE--eC---CeEEEEecCCceEEEEEec
Q 044903 295 -----------EEVLYGIDENSCTLSKYDEVMD--DWKEVVKSDLLKGARHAAA--GG---GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 -----------~g~ly~~g~~~~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~~--~~---~~l~v~gg~~~~i~v~d~~ 356 (387)
++.+++.++.++.|.+||..+. .+..+............+. .+ +++++.|+.++.+.+||+.
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp ---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 3567777778899999998654 3444444333333332332 34 7888888888999999998
Q ss_pred CC
Q 044903 357 AA 358 (387)
Q Consensus 357 ~~ 358 (387)
..
T Consensus 238 ~~ 239 (753)
T 3jro_A 238 NE 239 (753)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 65
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.52 E-value=0.0092 Score=53.37 Aligned_cols=187 Identities=10% Similarity=0.000 Sum_probs=99.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+....-.-........+..-++++++.|+.+. .+.+||..+.+
T Consensus 34 ~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--------~i~vwd~~~~~ 98 (312)
T 4ery_A 34 NGEWLASSSAD-------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDK--------TLKIWDVSSGK 98 (312)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTCC
T ss_pred CCCEEEEeeCC-------CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCC--------EEEEEECCCCc
Confidence 45566666532 3567888877766542111111111111122456777776543 68889988776
Q ss_pred cccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g 302 (387)
-...-.-... ....+. -++.+.+.|+....+.+||+.+.+-...-. .....-.+++. .++.+++.+
T Consensus 99 ----~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 167 (312)
T 4ery_A 99 ----CLKTLKGHSN-----YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP--AHSDPVSAVHFNRDGSLIVSS 167 (312)
T ss_dssp ----EEEEEECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEE
T ss_pred ----EEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec--CCCCcEEEEEEcCCCCEEEEE
Confidence 3221100100 111222 245666677777889999998764322111 00000112222 256677777
Q ss_pred CCCCeEEEEeCCCCceEEccccccccC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.+.+||..+.+-........... .......+++.++.++.++.+.+||..+.
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 224 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG 224 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 788999999998765432211111111 12233346777778777888999998744
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.52 E-value=0.0057 Score=55.07 Aligned_cols=145 Identities=11% Similarity=0.101 Sum_probs=76.8
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCC-CccccCeEEcC----CCCCCcccccceeEEEE--CCE-EEEEeeeCCeEEE
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMN-GEKNSRWEKTG----ELKDGRFSREAIDAVGW--KGK-LCLVNVKGAEGAV 267 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t-~~~~~~W~~~~----~~~~~~~~~~~~~~v~~--~g~-lyv~gg~~~~i~~ 267 (387)
..+|+.+..+ ..+.+||..+ .+ ...+. ..+.... ...+.+ +|+ +|+.+.....+.+
T Consensus 141 ~~l~~~~~~~--------~~v~~~d~~~~~~----~~~~~~~~~~~~~~~~----~~~~~~~pdg~~l~~~~~~~~~i~~ 204 (343)
T 1ri6_A 141 RTLWVPALKQ--------DRICLFTVSDDGH----LVAQDPAEVTTVEGAG----PRHMVFHPNEQYAYCVNELNSSVDV 204 (343)
T ss_dssp SEEEEEEGGG--------TEEEEEEECTTSC----EEEEEEEEEECSTTCC----EEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CEEEEecCCC--------CEEEEEEecCCCc----eeeecccccccCCCCC----cceEEECCCCCEEEEEeCCCCEEEE
Confidence 4577765332 2688899887 55 54322 1111111 112222 454 7776555578999
Q ss_pred EECC--CCceeeccc--cccCCC---CCc-EEEEe--CCeEEEEeCCCCeEEEEeCC--CCceEEccccccccCceeEE-
Q 044903 268 YDVV--ANTWDDMRE--GMVRGW---RGP-VAAMD--EEVLYGIDENSCTLSKYDEV--MDDWKEVVKSDLLKGARHAA- 334 (387)
Q Consensus 268 yD~~--~~~W~~~~~--~~~~~~---~~~-~~~~~--~g~ly~~g~~~~~v~~yd~~--~~~W~~v~~~~~~~~~~~~~- 334 (387)
||.. +.++..... ..+.+. ..+ .++.. +..||+....++.+.+||.+ +.+++.+...+.......++
T Consensus 205 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (343)
T 1ri6_A 205 WELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNV 284 (343)
T ss_dssp EESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEE
T ss_pred EEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEE
Confidence 9984 344433221 112211 111 23332 34677777667899999987 55677765443322232233
Q ss_pred EeCCe-EEEEecCCceEEEEEec
Q 044903 335 AGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 335 ~~~~~-l~v~gg~~~~i~v~d~~ 356 (387)
.-+|+ ||+.+..++.+.+|++.
T Consensus 285 s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 285 DHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp CTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCCEEEEecCCCCeEEEEEEc
Confidence 33455 56554456788888554
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.51 E-value=0.0027 Score=57.88 Aligned_cols=228 Identities=14% Similarity=0.058 Sum_probs=114.8
Q ss_pred CCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEE-EeCCEEEEEcCccCCCCCCCCccEEEeCCCCc
Q 044903 97 STPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLV-SLSGKLILLAATTHNFNPALTRPLIFDPICRT 175 (387)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~ 175 (387)
+....++.+|..++++..+...... .....++ .-++++|+.+... ....+++||..+.+
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~---------------~~p~~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~ 74 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT---------------QNPTYLALSAKDCLYSVDKED-----DEGGIAAWQIDGQT 74 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC---------------SCCCCEEECTTCEEEEEEEET-----TEEEEEEEEEETTE
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc---------------CCcceEEEccCCeEEEEEecC-----CCceEEEEEecCCc
Confidence 3456688889888776553321110 0001222 3467777765321 12568899998887
Q ss_pred eeeCCCCCC--CceeeeEEeeC-CEEEEEecCCCCCCCCCCceEEEEeCC-CCccccCeEEcCCCCCC------cccccc
Q 044903 176 WTFGPELVT--PRRWCAAGYSR-GAVYVASGIGSQFSSDVAKSVEKWDLM-NGEKNSRWEKTGELKDG------RFSREA 245 (387)
Q Consensus 176 W~~l~~~~~--~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~vyd~~-t~~~~~~W~~~~~~~~~------~~~~~~ 245 (387)
++.+..... ......+..-+ ..+|+.+..+ ..+.+||.. +.+ ...+..+... +.....
T Consensus 75 ~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--------~~v~v~~~~~~g~----~~~~~~~~~~~~~p~~~~~~~~ 142 (347)
T 3hfq_A 75 AHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--------GTAEVMKIAADGA----LTLTDTVQHSGHGPRPEQDGSH 142 (347)
T ss_dssp EEEEEEEEEESCCCSEEEEETTTTEEEEEETTT--------TEEEEEEECTTSC----EEEEEEEECCCCCSSTTCSSCC
T ss_pred EEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--------CEEEEEEeCCCCC----eeecceeecCCCCCCccccCCC
Confidence 766543221 11111122223 4577765322 257777774 223 3333211110 000001
Q ss_pred eeEEE--ECCEEEEEeeeCCeEEEEECC-CCceeecccc-ccCCCCCcEEEE-eCCe-EEEEeCCCCeEEEEeCC--CCc
Q 044903 246 IDAVG--WKGKLCLVNVKGAEGAVYDVV-ANTWDDMREG-MVRGWRGPVAAM-DEEV-LYGIDENSCTLSKYDEV--MDD 317 (387)
Q Consensus 246 ~~~v~--~~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~-~~~~~~~~~~~~-~~g~-ly~~g~~~~~v~~yd~~--~~~ 317 (387)
...+. -+|++|+.+.....+.+||.. +++...+... ...+.....++. .+|+ +|+.+...+.+.+||.+ +.+
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 222 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGA 222 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 11222 367777765555789999987 5555443211 111111112222 2444 88887777888888765 466
Q ss_pred eEEcccc---ccc----cCceeE-EEeCCe-EEEEecCCceEEEEEec
Q 044903 318 WKEVVKS---DLL----KGARHA-AAGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 318 W~~v~~~---~~~----~~~~~~-~~~~~~-l~v~gg~~~~i~v~d~~ 356 (387)
++.+... +.. .....+ +.-+|+ ||+.+..++.+.+||+.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 223 FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 6554432 211 112222 334565 77776667889999986
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.51 E-value=0.012 Score=52.49 Aligned_cols=190 Identities=13% Similarity=0.108 Sum_probs=101.6
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCcee-eeEEee---CCEEEEEecCCCCCCCCCCceEEEEe
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRW-CAAGYS---RGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~vyd 220 (387)
.++..++.|+.+ ..+.+||..+...+.+..+...... .+.+.. ++++++.|+.+. .+.+||
T Consensus 19 ~~g~~las~s~D-------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~--------~v~iWd 83 (297)
T 2pm7_B 19 YYGKRMATCSSD-------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG--------KVMIWK 83 (297)
T ss_dssp TTSSEEEEEETT-------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTT--------EEEEEE
T ss_pred CCCCEEEEEeCC-------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCC--------EEEEEE
Confidence 356666766642 3577888765443322222111111 112211 256777777644 788999
Q ss_pred CCCCccccCeEEcCCCCCCcccccceeEEEEC----CEEEEEeeeCCeEEEEECCCC-ceeeccccccCCCCCcEEEEe-
Q 044903 221 LMNGEKNSRWEKTGELKDGRFSREAIDAVGWK----GKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMD- 294 (387)
Q Consensus 221 ~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~----g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~- 294 (387)
..+.+ |..+..+.... .....+.+. |.+.+.++.+..+.+||..+. .+..... ......-.+++..
T Consensus 84 ~~~~~----~~~~~~~~~h~---~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~-~~h~~~v~~~~~~p 155 (297)
T 2pm7_B 84 EENGR----WSQIAVHAVHS---ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII-DAHAIGVNSASWAP 155 (297)
T ss_dssp BSSSC----BCCCEEECCCS---SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE-ECCSSCEEEEEECC
T ss_pred cCCCc----eEEEEEeecCC---CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee-ecccCccceEeecC
Confidence 98877 65543222111 112233332 566667777788999998765 3321100 0000000111111
Q ss_pred -------------CCeEEEEeCCCCeEEEEeCCCCc--eEEccccccccCceeEEEe--C---CeEEEEecCCceEEEEE
Q 044903 295 -------------EEVLYGIDENSCTLSKYDEVMDD--WKEVVKSDLLKGARHAAAG--G---GRVCAVCENGGGIVVVD 354 (387)
Q Consensus 295 -------------~g~ly~~g~~~~~v~~yd~~~~~--W~~v~~~~~~~~~~~~~~~--~---~~l~v~gg~~~~i~v~d 354 (387)
++++++.++.++.|.+||..+.. |..+..+..+......+.+ + +.+++.++.++.+.+||
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd 235 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWT 235 (297)
T ss_dssp CC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred CcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEE
Confidence 24577778888999999986543 6555444444443333332 2 47778877888999999
Q ss_pred ecC
Q 044903 355 VKA 357 (387)
Q Consensus 355 ~~~ 357 (387)
+..
T Consensus 236 ~~~ 238 (297)
T 2pm7_B 236 QDN 238 (297)
T ss_dssp ESS
T ss_pred eCC
Confidence 874
No 69
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.49 E-value=0.023 Score=50.40 Aligned_cols=203 Identities=9% Similarity=-0.007 Sum_probs=107.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.+|.+++.+. +.+..||+ +. .|+.-.+... .........+++++|...... ..+..+|+.
T Consensus 46 pdG~ilvs~~---------~~V~~~d~-~G~~~W~~~~~~~~-~~~~~~~~~dG~~lv~~~~~~-------~~v~~vd~~ 107 (276)
T 3no2_A 46 KAGEILFSYS---------KGAKMITR-DGRELWNIAAPAGC-EMQTARILPDGNALVAWCGHP-------STILEVNMK 107 (276)
T ss_dssp TTSCEEEECB---------SEEEEECT-TSCEEEEEECCTTC-EEEEEEECTTSCEEEEEESTT-------EEEEEECTT
T ss_pred CCCCEEEeCC---------CCEEEECC-CCCEEEEEcCCCCc-cccccEECCCCCEEEEecCCC-------CEEEEEeCC
Confidence 4677777321 45888998 55 3665332111 112222334677777644311 256777874
Q ss_pred CCccccCeEEcC--CCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC-ceeeccccccCCCCCcEEEEeCCeEE
Q 044903 223 NGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMDEEVLY 299 (387)
Q Consensus 223 t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~~g~ly 299 (387)
-.. . |+.-. ....+. ..........+|.+++.......+.+||++-+ .|+.-....+ ..+....+|.++
T Consensus 108 Gk~-l--~~~~~~~~~~~~~-~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~~~~~~----~~~~~~~~g~~~ 179 (276)
T 3no2_A 108 GEV-L--SKTEFETGIERPH-AQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVKLSGTP----FSSAFLDNGDCL 179 (276)
T ss_dssp SCE-E--EEEEECCSCSSGG-GSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEECSSCC----CEEEECTTSCEE
T ss_pred CCE-E--EEEeccCCCCccc-ccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEECCCCc----cceeEcCCCCEE
Confidence 332 2 54321 111110 00112234456777766554578999999833 5765432111 224445577888
Q ss_pred EEeCCCCeEEEEeCCCC--ceEEccc-ccc--ccCce-eEEEeCCeEEEEecCC----------ceEEEEEecCCCCCce
Q 044903 300 GIDENSCTLSKYDEVMD--DWKEVVK-SDL--LKGAR-HAAAGGGRVCAVCENG----------GGIVVVDVKAAAAPTI 363 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~--~W~~v~~-~~~--~~~~~-~~~~~~~~l~v~gg~~----------~~i~v~d~~~~~~~~~ 363 (387)
+.+...+.|..+|+++. .|+.-.. .+. +.... .....+|.+||....+ ..++-+|.+.+ -.
T Consensus 180 v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~---~~ 256 (276)
T 3no2_A 180 VACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGK---VV 256 (276)
T ss_dssp EECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSB---EE
T ss_pred EEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCC---EE
Confidence 88776778999999854 4665322 221 11122 3334588999987322 23444444432 68
Q ss_pred eEEcCCCCceeeE
Q 044903 364 FVVDTPLGFEALS 376 (387)
Q Consensus 364 W~~~~~~~~~~~~ 376 (387)
|+......|..++
T Consensus 257 W~~~~~~~~~~~~ 269 (276)
T 3no2_A 257 WQLNDKVKFGMIS 269 (276)
T ss_dssp EEECCTTTSCCCC
T ss_pred EEecCccccccee
Confidence 9987777666443
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.49 E-value=0.063 Score=54.97 Aligned_cols=183 Identities=11% Similarity=-0.005 Sum_probs=108.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCC----ceee-CC-CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICR----TWTF-GP-ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~----~W~~-l~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
++.||+.... ...++++++... .... +. .+..+. ..+....+++||++-.. ...|+++
T Consensus 435 ~~~lY~sD~~-------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~--------~~~I~v~ 498 (791)
T 3m0c_C 435 SNRIYWSDLS-------QRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSV--------LGTVSVA 498 (791)
T ss_dssp TTEEEEEETT-------TTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEE
T ss_pred CCeeEEeecc-------ceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecC--------CCeEEEE
Confidence 6788887542 245667776542 2222 22 222222 22222346799998543 2378999
Q ss_pred eCCCCccccCeEEcC--CCCCCcccccceeEEEE---CCEEEEEeeeC-CeEEEEECCCCceeeccccccCCCCCc-EEE
Q 044903 220 DLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGP-VAA 292 (387)
Q Consensus 220 d~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~---~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~ 292 (387)
|+.... -+.+. .+.. -.++++ +|.||+..-.. ..|+++++....=+.+.. .+...+ .++
T Consensus 499 ~ldG~~----~~~l~~~~l~~-------P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~---~~l~~P~GLa 564 (791)
T 3m0c_C 499 DTKGVK----RKTLFRENGSK-------PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGIT 564 (791)
T ss_dssp ETTSSS----EEEEEECTTCC-------EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---SSCSCEEEEE
T ss_pred eCCCCe----EEEEEeCCCCC-------cceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe---CCCCCceEEE
Confidence 988665 44443 2221 123333 58999986332 689999987543333221 111122 233
Q ss_pred E--eCCeEEEEeCCCCeEEEEeCCCCceEEccc-cccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 293 M--DEEVLYGIDENSCTLSKYDEVMDDWKEVVK-SDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~--~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~-~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+ .+++||+.+.....|.++|++...=+.+.. .......++++..+++||+.-.....|+.+|..++
T Consensus 565 vD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 565 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCC
Confidence 3 368999998777899999997654444432 22344567888899999999777889999987644
No 71
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.48 E-value=0.0023 Score=58.99 Aligned_cols=185 Identities=8% Similarity=0.046 Sum_probs=98.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++..++.|+.+ ..+.+||..+++-...-..........+... ++.+++.++.+. .+.+||..+.
T Consensus 150 dg~~l~sgs~d-------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg--------~v~~wd~~~~ 214 (357)
T 4g56_B 150 DGTQAVSGGKD-------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDG--------RILLWDTRKP 214 (357)
T ss_dssp SSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTS--------CEEECCTTSS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCC--------ceEEEECCCC
Confidence 56666666632 3578899888764432111111111111112 334666766543 5788888876
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCCcee-eccccccCCCCCcEEEE--eCCeE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWRGPVAAM--DEEVL 298 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~--~~g~l 298 (387)
+ -.......... ....++.+ ++.+++.|+....+.+||..+.+=. .+.. ... .-.+++. .++++
T Consensus 215 ~----~~~~~~~~~~~---~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~-~~~--~v~~l~~sp~~~~~ 284 (357)
T 4g56_B 215 K----PATRIDFCASD---TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV-HSQ--NITGLAYSYHSSPF 284 (357)
T ss_dssp S----CBCBCCCTTCC---SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC-CSS--CEEEEEECSSSSCC
T ss_pred c----eeeeeeecccc---ccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec-cce--eEEEEEEcCCCCCE
Confidence 6 22221111110 11223333 3567777776678999998765321 1111 111 1122333 23456
Q ss_pred EEEeCCCCeEEEEeCCCCceEEccccccccCce-eEEE--eCCeEEEEecCCceEEEEEecCC
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR-HAAA--GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~-~~~~--~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+.++.++.|.+||.++.+-... .. +.... +++. .++++++.++.++.|.+||+...
T Consensus 285 lasgs~D~~i~iwd~~~~~~~~~--~~-H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 285 LASISEDCTVAVLDADFSEVFRD--LS-HRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEEETTSCEEEECTTSCEEEEE--CC-CSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEEeCCCEEEEEECCCCcEeEE--CC-CCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 66677789999999987743322 21 22222 2332 36888888888999999998743
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.48 E-value=0.033 Score=51.84 Aligned_cols=173 Identities=10% Similarity=0.001 Sum_probs=96.5
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~ 242 (387)
..+.+||..+++............-.+.+.. ++++++.|+.+. .+.+||..+.+ -...-....
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg--------~i~iwd~~~~~----~~~~~~~~~---- 176 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNG--------LVDIYDVESQT----KLRTMAGHQ---- 176 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCC----EEEEECCCS----
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCC--------eEEEEECcCCe----EEEEecCCC----
Confidence 4688999998887664433222211222222 556666666533 68899988876 332211111
Q ss_pred ccceeEEEECCEEEEEeeeCCeEEEEECCCCcee--eccccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceE
Q 044903 243 REAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWD--DMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWK 319 (387)
Q Consensus 243 ~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~--~~~~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~ 319 (387)
.....+..++.+.+.|+....+.+||.....-. .+.. ..+ .-.+++.. ++.+++.++.++.|.+||..+..-.
T Consensus 177 -~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 177 -ARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQG--HSS-EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp -SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC--CSS-CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred -CceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcC--CCC-CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 113345557777777777789999999743211 1111 111 11122222 5677777778899999999875322
Q ss_pred EccccccccCce-eEEEe--CCeEEEEec--CCceEEEEEecCC
Q 044903 320 EVVKSDLLKGAR-HAAAG--GGRVCAVCE--NGGGIVVVDVKAA 358 (387)
Q Consensus 320 ~v~~~~~~~~~~-~~~~~--~~~l~v~gg--~~~~i~v~d~~~~ 358 (387)
. ......... ++... +..+++.|+ .++.+.+||..+.
T Consensus 253 ~--~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~ 294 (401)
T 4aez_A 253 F--TKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG 294 (401)
T ss_dssp E--EECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC
T ss_pred E--EecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC
Confidence 2 111222222 22222 457777765 4788999998754
No 73
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.48 E-value=0.0085 Score=54.24 Aligned_cols=181 Identities=11% Similarity=0.061 Sum_probs=96.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+-...-..........+..-+++.++.|+.+. .+.+||..+.+
T Consensus 133 dg~~l~~g~~d-------g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg--------~i~iwd~~~~~ 197 (321)
T 3ow8_A 133 DSQYLATGTHV-------GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG--------IINIFDIATGK 197 (321)
T ss_dssp TSSEEEEECTT-------SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE
T ss_pred CCCEEEEEcCC-------CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCC--------eEEEEECCCCc
Confidence 45555555422 3567777776543221111111111111122566667766543 68899998876
Q ss_pred cccCeE-EcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEE
Q 044903 226 KNSRWE-KTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGI 301 (387)
Q Consensus 226 ~~~~W~-~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~ 301 (387)
-. .+..-..+ ...+. -++++.+.++.+..+.+||..+..-...-.+- .. .-.+++. .+++.++.
T Consensus 198 ----~~~~~~~h~~~------v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h-~~-~v~~~~~sp~~~~l~s 265 (321)
T 3ow8_A 198 ----LLHTLEGHAMP------IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGH-AS-WVLNVAFCPDDTHFVS 265 (321)
T ss_dssp ----EEEEECCCSSC------CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCC-SS-CEEEEEECTTSSEEEE
T ss_pred ----EEEEEcccCCc------eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCC-CC-ceEEEEECCCCCEEEE
Confidence 32 22211111 11222 36777777777788999999876543221100 00 0112222 25667777
Q ss_pred eCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEe
Q 044903 302 DENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 302 g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~ 355 (387)
++.++.|.+||..+.+ .+............+ ..+++.++.++.++.+.+||.
T Consensus 266 ~s~D~~v~iwd~~~~~--~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 266 SSSDKSVKVWDVGTRT--CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EeCCCcEEEEeCCCCE--EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 7788999999998764 333332233332222 336777788788889999985
No 74
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.46 E-value=0.026 Score=51.02 Aligned_cols=184 Identities=10% Similarity=0.007 Sum_probs=100.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++.+++.|+.+ ..+.+||..+.+-.. +..-+ ......+..-+++.++.|+.+. .+.+||..+.
T Consensus 91 ~~~~l~s~s~D-------~~i~lWd~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~g~~dg--------~v~i~~~~~~ 154 (321)
T 3ow8_A 91 TLPIAASSSLD-------AHIRLWDLENGKQIKSIDAGP-VDAWTLAFSPDSQYLATGTHVG--------KVNIFGVESG 154 (321)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCT-TCCCCEEECTTSSEEEEECTTS--------EEEEEETTTC
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCCEEEEEeCCC-ccEEEEEECCCCCEEEEEcCCC--------cEEEEEcCCC
Confidence 34555555532 457788887765432 11111 1111112222456666666533 6788888877
Q ss_pred ccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGI 301 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~ 301 (387)
+.. +.... ... ...++. -+|++.+.|+.+..+.+||..+.+-...-..... .-.+++. .++++++.
T Consensus 155 ~~~--~~~~~--~~~-----~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 155 KKE--YSLDT--RGK-----FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQLLVT 223 (321)
T ss_dssp SEE--EEEEC--SSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CCCEEEECTTSCEEEE
T ss_pred cee--EEecC--CCc-----eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC--ceeEEEEcCCCCEEEE
Confidence 621 11111 100 012222 3677777777778899999987643221111111 1123333 35677778
Q ss_pred eCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 302 DENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.++.|.+||..+..-.. ...........+ ..+++.++.|+.++.+.+||+.+.
T Consensus 224 ~s~dg~i~iwd~~~~~~~~--~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAG--TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp ECTTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcCCCeEEEEECCCcceeE--EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 8888999999998764432 222222222222 336788888888899999998754
No 75
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.46 E-value=0.036 Score=50.21 Aligned_cols=199 Identities=11% Similarity=0.090 Sum_probs=104.8
Q ss_pred eEEE-eCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCC-----CC-c-eeeeEEee--CCEEEEEecCCCCC
Q 044903 141 QLVS-LSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELV-----TP-R-RWCAAGYS--RGAVYVASGIGSQF 208 (387)
Q Consensus 141 ~~~~-~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~-----~~-r-~~~~~~~~--~~~iyv~GG~~~~~ 208 (387)
.++. .++.+|+.... ...+.+||+..+ .-..+.... .. . .-...+.. ++.+||+.+...
T Consensus 95 gia~d~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~-- 165 (329)
T 3fvz_A 95 GLSIDTDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN-- 165 (329)
T ss_dssp EEEECTTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC--
T ss_pred EEEECCCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC--
Confidence 3444 36778887642 246888998765 222222100 00 0 11223333 689999976322
Q ss_pred CCCCCceEEEEeCCCCccccCeEEcCCCCCC----cccccceeEEEE--C-CEEEEEeeeCCeEEEEECCCCceeecccc
Q 044903 209 SSDVAKSVEKWDLMNGEKNSRWEKTGELKDG----RFSREAIDAVGW--K-GKLCLVNVKGAEGAVYDVVANTWDDMREG 281 (387)
Q Consensus 209 ~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~----~~~~~~~~~v~~--~-g~lyv~gg~~~~i~~yD~~~~~W~~~~~~ 281 (387)
..+.+||+.... -..+...... .........+.+ + |.||+.......+.+||+++++....-..
T Consensus 166 -----~~I~~~~~~g~~----~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~ 236 (329)
T 3fvz_A 166 -----SRIVQFSPSGKF----VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH 236 (329)
T ss_dssp -----CEEEEECTTSCE----EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred -----CeEEEEcCCCCE----EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec
Confidence 368888855443 2333211110 000011223333 4 89999977678999999986655432111
Q ss_pred ccCCCCCcEEEEeCCeEEEEeC-------CCCeEEEEeCCCCceEEccc--cccccCceeEE-EeCCeEEEEecCCceEE
Q 044903 282 MVRGWRGPVAAMDEEVLYGIDE-------NSCTLSKYDEVMDDWKEVVK--SDLLKGARHAA-AGGGRVCAVCENGGGIV 351 (387)
Q Consensus 282 ~~~~~~~~~~~~~~g~ly~~g~-------~~~~v~~yd~~~~~W~~v~~--~~~~~~~~~~~-~~~~~l~v~gg~~~~i~ 351 (387)
...+.....++...+.+|...+ ....+.+||..+.+...... .........++ .-+|.|||....++.|.
T Consensus 237 ~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 237 ASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVW 316 (329)
T ss_dssp TTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEE
T ss_pred cccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEE
Confidence 1111111122222344444443 34579999988776555422 12222334444 34679999987788999
Q ss_pred EEEecC
Q 044903 352 VVDVKA 357 (387)
Q Consensus 352 v~d~~~ 357 (387)
+|++..
T Consensus 317 ~~~~~~ 322 (329)
T 3fvz_A 317 KFTLTE 322 (329)
T ss_dssp EEEEEE
T ss_pred EEeCCc
Confidence 999873
No 76
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.43 E-value=0.011 Score=52.96 Aligned_cols=183 Identities=11% Similarity=0.068 Sum_probs=100.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceee-eEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWC-AAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++..++.|+.+ ..+.+||..+.+......+....... ..+. -+++.++.|+.+. .+.+||..+
T Consensus 108 ~~~~l~~~~~d-------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~v~~~d~~~ 172 (337)
T 1gxr_A 108 DGCTLIVGGEA-------STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDG--------NIAVWDLHN 172 (337)
T ss_dssp TSSEEEEEESS-------SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCC
Confidence 45566666532 46888999887754432222111111 1222 2456666666533 688999988
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYG 300 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~ 300 (387)
.+ ....-..... ....+.+ ++..++.++....+.+||+.+.+-...-. ... ...+++. .+++.++
T Consensus 173 ~~----~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~--~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 173 QT----LVRQFQGHTD-----GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTS--QIFSLGYCPTGEWLA 240 (337)
T ss_dssp TE----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSS--CEEEEEECTTSSEEE
T ss_pred Cc----eeeeeecccC-----ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCC--ceEEEEECCCCCEEE
Confidence 76 3322211111 1223333 66666777767789999998764322211 111 1122222 3566777
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCce-e-EEEeCCeEEEEecCCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGAR-H-AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~-~-~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++..++.+.+||..+..-..+ ....... . ....++++++.++.++.+.+||....
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKYQL---HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EEETTSCEEEEETTSSCEEEE---CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEcCCCcEEEEECCCCCeEEE---cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 777788999999987643222 1122222 2 22336788888788889999998854
No 77
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.41 E-value=0.006 Score=54.95 Aligned_cols=175 Identities=7% Similarity=0.030 Sum_probs=91.8
Q ss_pred ccEEEeCCCCceeeCCCCCCCceeeeEEee-CC-EEEEEecCCCCCCCCCCce-EEEEeCCCCccccCeEEc--CCCCCC
Q 044903 165 RPLIFDPICRTWTFGPELVTPRRWCAAGYS-RG-AVYVASGIGSQFSSDVAKS-VEKWDLMNGEKNSRWEKT--GELKDG 239 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~-v~vyd~~t~~~~~~W~~~--~~~~~~ 239 (387)
.+.+||..+++....-+.. ......+.. ++ .+|+.+.... . +.+|+...+.. -... ..++..
T Consensus 109 ~i~v~d~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~--------~~i~~~~~~~~g~---~~~~~~~~~~~~ 175 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP--YDAVGIAISPNGNGLILIDRSSA--------NTVRRFKIDADGV---LFDTGQEFISGG 175 (331)
T ss_dssp EEEEEETTTTEEEEEEECC--TTEEEEEECTTSSCEEEEEETTT--------TEEEEEEECTTCC---EEEEEEEEECSS
T ss_pred cEEEEECCCCCeEEEEECC--CCccceEECCCCCEEEEEecCCC--------ceEEEEEECCCCc---EeecCCccccCC
Confidence 7899999988765432221 111222222 33 5887765422 3 66776654330 1110 000111
Q ss_pred cccccceeEEEECCE-EEEEeeeCCeEEEEECCCCce----eeccccccCCCCCcEEEE-eCCe-EEEEeCCCCeEEEEe
Q 044903 240 RFSREAIDAVGWKGK-LCLVNVKGAEGAVYDVVANTW----DDMREGMVRGWRGPVAAM-DEEV-LYGIDENSCTLSKYD 312 (387)
Q Consensus 240 ~~~~~~~~~v~~~g~-lyv~gg~~~~i~~yD~~~~~W----~~~~~~~~~~~~~~~~~~-~~g~-ly~~g~~~~~v~~yd 312 (387)
... ...+..-+|+ +|+.+.....+.+||+.+.+. ..++. +.....+++ .+|+ ||+.....+.|.+||
T Consensus 176 ~~~--~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 176 TRP--FNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT----NNLPGTIVVSRDGSTVYVLTESTVDVFNFN 249 (331)
T ss_dssp SSE--EEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC----SSCCCCEEECTTSSEEEEECSSEEEEEEEE
T ss_pred CCc--cceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC----CCCCceEEECCCCCEEEEEEcCCCEEEEEE
Confidence 100 0112222564 777765557899999987764 22221 111122232 3444 777765566799999
Q ss_pred CCCCceEEccccccc-----cCce----eEEEeCC-eEEEEecCCceEEEEEecCC
Q 044903 313 EVMDDWKEVVKSDLL-----KGAR----HAAAGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 313 ~~~~~W~~v~~~~~~-----~~~~----~~~~~~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++.+.+.+...+.. .... ....-+| .||+.+..++.+.+||+...
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 250 QLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp TTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred CCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 998877555432211 1111 1333444 56777666789999999854
No 78
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.40 E-value=0.0028 Score=58.22 Aligned_cols=185 Identities=9% Similarity=0.062 Sum_probs=97.0
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++..++.|+.+ ..+.+||..+++-...-.-...........- +..+++.|+.+. .+.+||..+.
T Consensus 138 dg~~l~sgs~d-------~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~--------~v~iwd~~~~ 202 (344)
T 4gqb_B 138 SGTQAVSGSKD-------ICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDN--------RILLWDTRCP 202 (344)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTSS
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeecccc--------cccccccccc
Confidence 56666666632 3578899887754331111111111111112 335777777644 6789999887
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCCcee-eccccccCCCCCcEEEEe-CC-eE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWRGPVAAMD-EE-VL 298 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~~-~g-~l 298 (387)
+ -...-...... ....++.+ ++++++.|+.+..+.+||..+.+-. .+.. . ...-.+++.. ++ ++
T Consensus 203 ~----~~~~~~~~~~~---~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~-h--~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 203 K----PASQIGCSAPG---YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV-H--SQCVTGLVFSPHSVPF 272 (344)
T ss_dssp S----CEEECC----C---CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC-C--SSCEEEEEECSSSSCC
T ss_pred c----eeeeeecceee---ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC-C--CCCEEEEEEccCCCeE
Confidence 6 32221111110 01222222 4567777777788999998765321 1111 0 1011233332 33 56
Q ss_pred EEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEe---CCeEEEEecCCceEEEEEecCC
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG---GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~---~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+.++.++.|.+||..+.+-.. ...+......+.+ +..+++.++.++.|.+|++...
T Consensus 273 lasgs~D~~i~vwd~~~~~~~~---~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 273 LASLSEDCSLAVLDSSLSELFR---SQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEEETTSCEEEECTTCCEEEE---ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred EEEEeCCCeEEEEECCCCcEEE---EcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 6667788999999998774322 2222333323332 4467777788899999998754
No 79
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.40 E-value=0.0073 Score=55.21 Aligned_cols=189 Identities=14% Similarity=0.193 Sum_probs=105.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC--CCceeeeEE-eeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV--TPRRWCAAG-YSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~--~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
++.+++.|+.+ ..+.+||..+++|.....+. ....-.+.+ .-+++.++.|+.+. .+.+||..
T Consensus 27 ~g~~las~~~D-------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~--------~v~iw~~~ 91 (345)
T 3fm0_A 27 AGTLLASCGGD-------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA--------TTCIWKKN 91 (345)
T ss_dssp TSSCEEEEETT-------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEEC
T ss_pred CCCEEEEEcCC-------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC--------cEEEEEcc
Confidence 55666666632 35778888887765322111 111111122 12566677776544 56778877
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCC-ceeeccccccCCCCCcEEEE-eCCeE
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~-~~g~l 298 (387)
++. +..+..+.... ....++.+ +|++.+.++.+..+.++|..+. .+..+.........-.+++. .++.+
T Consensus 92 ~~~----~~~~~~~~~h~---~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 92 QDD----FECVTTLEGHE---NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp CC-----EEEEEEECCCS---SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred CCC----eEEEEEccCCC---CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 776 55443322111 11223333 5677777777788999998764 33322210000000112222 24567
Q ss_pred EEEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEec
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
++.++.++.+.+||.++..|..+............+ ..+|+.++.|+.++.+.+||..
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 777778899999999998887665554444332222 3467888888888889999863
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.37 E-value=0.019 Score=53.49 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=63.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CCe-EEEEeCCCCeEEEEeCCCCce--EEccccccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEV-LYGIDENSCTLSKYDEVMDDW--KEVVKSDLL 327 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g~-ly~~g~~~~~v~~yd~~~~~W--~~v~~~~~~ 327 (387)
+|++.+.|+....+.+||..+.+-...-...... ...+++.. ++. +++.++.++.|.+||..+..- ..+... ..
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~-~~ 335 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTC-SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLIN-EG 335 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEEECCTTSS-CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEES-TT
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEEcccccCC-CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhcc-CC
Confidence 6777777777788999999776422111100111 11122322 344 777777889999999987532 221110 11
Q ss_pred cCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 328 KGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.....+...++++++.++.++.+.+||+...
T Consensus 336 ~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 336 TPINNVYFAAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp SCEEEEEEETTEEEEEETTTEEEEEEEECCT
T ss_pred CCceEEEeCCCCEEEEecCCccEEEEeccCC
Confidence 1123345568888888888899999998853
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.35 E-value=0.048 Score=51.57 Aligned_cols=184 Identities=11% Similarity=0.076 Sum_probs=95.0
Q ss_pred EeCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 144 SLSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 144 ~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
..++..++.|+.+ ..+.+||..+.+-...-..........+..-+++.++.|+.+. .+.+||..+
T Consensus 277 ~~~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg--------~i~vwd~~~ 341 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT--------TIRIWDLEN 341 (464)
T ss_dssp EEETTEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTT
T ss_pred cCCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC--------cEEEEECCC
Confidence 3445556666532 4678899887654331111111111222222456666666543 688999988
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeC
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDE 303 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~ 303 (387)
.+ -...-... .....++.+++...+.++.+..+.+||+.+..-..... ............++.+.+.++
T Consensus 342 ~~----~~~~~~~h-----~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 342 GE----LMYTLQGH-----TALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYH--HTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp TE----EEEEECCC-----SSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEEEEE--CTTCCCEEEEEECSSEEEEEE
T ss_pred Cc----EEEEEeCC-----CCcEEEEEEcCCEEEEEeCCCcEEEEECCCCceeeeec--CCCCccEEEEEeCCCEEEEec
Confidence 76 22211111 11244556677777777777899999998754221111 111112223344666666665
Q ss_pred CCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCce--EEEEE
Q 044903 304 NSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGG--IVVVD 354 (387)
Q Consensus 304 ~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~--i~v~d 354 (387)
++.+.+||.++.+-......+....-..+...++.+++.++.++. ++++|
T Consensus 411 -dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~~~~g~~~i~~ld 462 (464)
T 3v7d_B 411 -ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEKDGQSFLEILD 462 (464)
T ss_dssp -TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEEEETTEEEEEEEE
T ss_pred -CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEEEeCCeEEEEEee
Confidence 789999999887654422222222223333345555555443433 34444
No 82
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.35 E-value=0.012 Score=55.20 Aligned_cols=185 Identities=11% Similarity=0.091 Sum_probs=98.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+++.|+.+ ..+.+||..+.+....-..........+..-++++++.|+.+. .+.+||..+.+
T Consensus 119 ~~~~l~s~s~D-------g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~--------~i~iwd~~~~~ 183 (410)
T 1vyh_C 119 VFSVMVSASED-------ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADM--------TIKLWDFQGFE 183 (410)
T ss_dssp SSSEEEEEESS-------SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTS--------CCCEEETTSSC
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEeCCCCc
Confidence 45666766632 4678899887764331111111111111122567777777644 56788887655
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g 302 (387)
-.. .+.... ....++.+ ++...+.|+.+..+.+||..++.-...-.. ...+ -..+. ..++.+++.+
T Consensus 184 ----~~~--~~~~h~---~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~-v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 184 ----CIR--TMHGHD---HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREW-VRMVRPNQDGTLIASC 252 (410)
T ss_dssp ----EEE--CCCCCS---SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSC-EEEEEECTTSSEEEEE
T ss_pred ----eeE--EEcCCC---CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-CCcc-EEEEEECCCCCEEEEE
Confidence 222 121110 11223333 566667777778999999987653221110 0110 01112 2356777788
Q ss_pred CCCCeEEEEeCCCCceEEccccccccCceeEEE----------------------eCCeEEEEecCCceEEEEEecCC
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA----------------------GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~----------------------~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.|.+||..+..-.... ........++. ..+.+++.|+.++.+.+||+.++
T Consensus 253 s~D~~v~vwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~ 328 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAEL--REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG 328 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEE--CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT
T ss_pred cCCCeEEEEECCCCceeeEe--cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC
Confidence 88899999999876544321 11111111111 12667778778888999998754
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.35 E-value=0.014 Score=52.54 Aligned_cols=221 Identities=8% Similarity=-0.032 Sum_probs=111.8
Q ss_pred CeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEE-eCC-EEEEEcCccCCCCCCCCccEEEeCCCCce
Q 044903 99 PIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVS-LSG-KLILLAATTHNFNPALTRPLIFDPICRTW 176 (387)
Q Consensus 99 ~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~vydp~t~~W 176 (387)
...+.++|+.+++....-..+.. . ..++. -++ .+|+.+.. ...++++|+.+++.
T Consensus 19 ~~~v~~~d~~~~~~~~~~~~~~~----------------~-~~~~~s~dg~~l~~~~~~-------~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 19 LRRISFFSTDTLEILNQITLGYD----------------F-VDTAITSDCSNVVVTSDF-------CQTLVQIETQLEPP 74 (331)
T ss_dssp GTEEEEEETTTCCEEEEEECCCC----------------E-EEEEECSSSCEEEEEEST-------TCEEEEEECSSSSC
T ss_pred CCeEEEEeCcccceeeeEEccCC----------------c-ceEEEcCCCCEEEEEeCC-------CCeEEEEECCCCce
Confidence 34688899888766443222221 0 12222 244 46666542 14789999988874
Q ss_pred -ee-CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE-ECC
Q 044903 177 -TF-GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKG 253 (387)
Q Consensus 177 -~~-l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g 253 (387)
.. +.....+....+...-+..+| ++... .....+.+||..+++ -...-+.... ....+. -+|
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~-----~~~~~i~v~d~~~~~----~~~~~~~~~~-----~~~~~~spdg 139 (331)
T 3u4y_A 75 KVVAIQEGQSSMADVDITPDDQFAV-TVTGL-----NHPFNMQSYSFLKNK----FISTIPIPYD-----AVGIAISPNG 139 (331)
T ss_dssp EEEEEEECSSCCCCEEECTTSSEEE-ECCCS-----SSSCEEEEEETTTTE----EEEEEECCTT-----EEEEEECTTS
T ss_pred eEEecccCCCCccceEECCCCCEEE-EecCC-----CCcccEEEEECCCCC----eEEEEECCCC-----ccceEECCCC
Confidence 22 222112221112222234566 32221 112378999998887 4433222111 122222 355
Q ss_pred E-EEEEeeeCCe-EEEEECCCCc-eeec-cccccCCCCCcEEEE-eCC-eEEEEeCCCCeEEEEeCCCCce-EEcccccc
Q 044903 254 K-LCLVNVKGAE-GAVYDVVANT-WDDM-REGMVRGWRGPVAAM-DEE-VLYGIDENSCTLSKYDEVMDDW-KEVVKSDL 326 (387)
Q Consensus 254 ~-lyv~gg~~~~-i~~yD~~~~~-W~~~-~~~~~~~~~~~~~~~-~~g-~ly~~g~~~~~v~~yd~~~~~W-~~v~~~~~ 326 (387)
+ +|+.+..... +.+||...+. -... ......+.....++. .+| .+|+.+..++.+.+||+++.+. +.+...+.
T Consensus 140 ~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 140 NGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp SCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred CEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 4 7777665556 8888876432 1111 110111111122232 234 4888887788999999987765 11222222
Q ss_pred ccCcee-EEEeCCe-EEEEecCCceEEEEEecCC
Q 044903 327 LKGARH-AAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 327 ~~~~~~-~~~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
...... .+.-+|+ +|+....+..+.++|..++
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 222222 3334565 7777555677999998854
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.33 E-value=0.017 Score=52.44 Aligned_cols=189 Identities=15% Similarity=0.126 Sum_probs=95.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+++.|+.+ ..+.+||..+.+-...-.-...........-+++.++.++.+. .+.+||..+.+
T Consensus 43 ~~~~l~~~~~d-------g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~~ 107 (369)
T 3zwl_B 43 EGDLLFSCSKD-------SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADY--------SIKLWDVSNGQ 107 (369)
T ss_dssp TSCEEEEEESS-------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTT--------EEEEEETTTCC
T ss_pred CCCEEEEEeCC-------CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCc
Confidence 55666666532 3678889877654331111111111111112456666666543 68899988877
Q ss_pred cccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC-----CeEEEEECCCCc----eeeccccc------cCCC-CCc
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG-----AEGAVYDVVANT----WDDMREGM------VRGW-RGP 289 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~-----~~i~~yD~~~~~----W~~~~~~~------~~~~-~~~ 289 (387)
-...-....+. ......-++..++.++.. ..+.+||..+.. +....... ..+. ...
T Consensus 108 ----~~~~~~~~~~v----~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 108 ----CVATWKSPVPV----KRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp ----EEEEEECSSCE----EEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred ----EEEEeecCCCe----EEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 33322222111 011122245555555544 578888876442 11111000 0000 111
Q ss_pred EEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 290 VAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 290 ~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++ ..+++.++.++.++.|.+||..+. ...+............+ ..+++.++.++.++.+.+||..+.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNN-YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCC-cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 122 224566677777899999999873 12222222222222222 337778888778889999999854
No 85
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.33 E-value=0.014 Score=52.02 Aligned_cols=227 Identities=9% Similarity=0.027 Sum_probs=114.6
Q ss_pred eEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEE-eC-CEEEEEcCccCCCCCCCCccEEEeCCCCcee
Q 044903 100 IHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVS-LS-GKLILLAATTHNFNPALTRPLIFDPICRTWT 177 (387)
Q Consensus 100 ~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~ 177 (387)
..++.||+.++++..+.. +. .... ......++. .+ +.+|+.... +.+++||+. ++..
T Consensus 46 ~~i~~~d~~~g~~~~~~~-~~---~~~~--------~~~~~~i~~~~~~g~l~v~~~~--------~~l~~~d~~-g~~~ 104 (314)
T 1pjx_A 46 GEILRIDLKTGKKTVICK-PE---VNGY--------GGIPAGCQCDRDANQLFVADMR--------LGLLVVQTD-GTFE 104 (314)
T ss_dssp CEEEEECTTTCCEEEEEC-CE---ETTE--------ECCEEEEEECSSSSEEEEEETT--------TEEEEEETT-SCEE
T ss_pred CEEEEEeCCCCcEEEEEe-cc---cCCC--------CCCCceEEEecCCCcEEEEECC--------CCEEEEeCC-CCEE
Confidence 357888988877765432 10 0000 001133333 34 678887541 368899998 7777
Q ss_pred eC-CCCCC----CceeeeEEeeCCEEEEEecCCCC-------CCCCCCceEEEEeCCCCccccCeEEcCC-CCCCccccc
Q 044903 178 FG-PELVT----PRRWCAAGYSRGAVYVASGIGSQ-------FSSDVAKSVEKWDLMNGEKNSRWEKTGE-LKDGRFSRE 244 (387)
Q Consensus 178 ~l-~~~~~----~r~~~~~~~~~~~iyv~GG~~~~-------~~~~~~~~v~vyd~~t~~~~~~W~~~~~-~~~~~~~~~ 244 (387)
.+ ..... ......+..-++++|+....... ........+..||+. .+ ...+.. ...+
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~----~~~~~~~~~~~----- 174 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ----MIQVDTAFQFP----- 174 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC----EEEEEEEESSE-----
T ss_pred EEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CC----EEEeccCCCCc-----
Confidence 66 33221 11112222236789887643210 001122467888876 55 544321 1100
Q ss_pred ceeEEE----ECC-EEEEEeeeCCeEEEEECC-CCceeeccc--cccCCC-CC-cEEEE-eCCeEEEEeCCCCeEEEEeC
Q 044903 245 AIDAVG----WKG-KLCLVNVKGAEGAVYDVV-ANTWDDMRE--GMVRGW-RG-PVAAM-DEEVLYGIDENSCTLSKYDE 313 (387)
Q Consensus 245 ~~~~v~----~~g-~lyv~gg~~~~i~~yD~~-~~~W~~~~~--~~~~~~-~~-~~~~~-~~g~ly~~g~~~~~v~~yd~ 313 (387)
...+.. -+| .+|+.......+.+||+. +++...... ..+... .. ..+++ .+|+||+.....+.|.+||+
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~ 254 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGP 254 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcC
Confidence 011222 245 477765445688999876 343321110 011110 11 12332 35789988766778999999
Q ss_pred CCCceEEccccccccCceeEE-EeCCe-EEEEecCCceEEEEEecCC
Q 044903 314 VMDDWKEVVKSDLLKGARHAA-AGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~-~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
++.+-......+. ....+++ .-+|+ ||+.+..++.++++|+...
T Consensus 255 ~~g~~~~~~~~~~-~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 255 DGGQPKMRIRCPF-EKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TCBSCSEEEECSS-SCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCCcEeEEEeCCC-CCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8443322212221 2223333 23565 8888666789999998743
No 86
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.33 E-value=0.0075 Score=54.96 Aligned_cols=190 Identities=13% Similarity=0.084 Sum_probs=97.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+++.|+.+ ..+.+||..+.+-...-+.........+..-+++..+.||.+. .+.+||..+..
T Consensus 66 d~~~l~s~s~D-------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~--------~v~iw~~~~~~ 130 (340)
T 1got_B 66 DSRLLLSASQD-------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN--------ICSIYNLKTRE 130 (340)
T ss_dssp TSSEEEEEETT-------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTC--------EEEEEETTTCS
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCC--------eEEEEECccCC
Confidence 45566666532 3577888776653321111111111111222556667776543 67888887654
Q ss_pred cccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEeCC
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDEN 304 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~ 304 (387)
.. ......+...... -.+....-+++ ++.++.+..+.+||+.+.+-...-.. ..+ .-.+++. .++++++.++.
T Consensus 131 ~~--~~~~~~~~~h~~~-v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~-~v~~~~~~~~~~~l~sg~~ 204 (340)
T 1got_B 131 GN--VRVSRELAGHTGY-LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTG-HTG-DVMSLSLAPDTRLFVSGAC 204 (340)
T ss_dssp BS--CEEEEEEECCSSC-EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECC-CSS-CEEEEEECTTSSEEEEEET
T ss_pred Cc--ceeEEEecCCCcc-EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcC-CCC-ceEEEEECCCCCEEEEEeC
Confidence 11 2211111100000 00112223555 44555557899999987754322110 111 0112222 35677888888
Q ss_pred CCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 305 SCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 305 ~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.|.+||..+..-.. ......... .+...+++.++.|+.++.+.+||....
T Consensus 205 d~~v~~wd~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~ 258 (340)
T 1got_B 205 DASAKLWDVREGMCRQ--TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD 258 (340)
T ss_dssp TSCEEEEETTTCSEEE--EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCcEEEEECCCCeeEE--EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 8999999997764322 222222222 222346788888888889999998753
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.32 E-value=0.033 Score=56.89 Aligned_cols=189 Identities=8% Similarity=-0.036 Sum_probs=100.7
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
-++..++.|+.+ ..+.+||..+++....-.-........+..-+++..+.|+.+. .+.+||..++
T Consensus 65 ~~~~~l~~~~~d-------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~ 129 (814)
T 3mkq_A 65 ARKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWENN 129 (814)
T ss_dssp GGGTEEEEEETT-------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTS--------EEEEEEGGGT
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCC--------EEEEEECCCC
Confidence 355666666532 4678999888765432111111111111122455555555432 6888998776
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe---CCeEE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD---EEVLY 299 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~---~g~ly 299 (387)
|.....+..... .....+.. ++.+++.++....+.+||..+..-...-.. ........++.. ++..+
T Consensus 130 -----~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l 201 (814)
T 3mkq_A 130 -----WALEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYM 201 (814)
T ss_dssp -----SEEEEEEECCSS--CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC-CCTTCCCEEEECCSTTCCEE
T ss_pred -----ceEEEEEcCCCC--cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec-CCCCCEEEEEEEECCCCCEE
Confidence 222221111000 01222222 466777777778899999876532211110 110112233332 56778
Q ss_pred EEeCCCCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 300 GIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.++.+.+||..+..- +.......... .....++.+++.|+.++.+.+||..+.
T Consensus 202 ~~~~~dg~i~~~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~ 260 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQTKSC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (814)
T ss_dssp EEECTTSEEEEEETTTTEE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred EEEeCCCEEEEEECCCCcE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 8888889999999977643 22222222222 233446778888788889999998853
No 88
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.31 E-value=0.012 Score=53.98 Aligned_cols=175 Identities=11% Similarity=0.060 Sum_probs=92.0
Q ss_pred CccEEEeCCCCceeeCCCCC---CCceeeeEE-eeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELV---TPRRWCAAG-YSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~---~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
..+.+||..+++-....... ....-.+.+ .-+++.++.|+.+. .+.+||..+++ -...-.-..
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~--------~i~iwd~~~~~----~~~~~~~h~- 169 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI--------CIKVWDLAQQV----VLSSYRAHA- 169 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCS-
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEEcCcC-
Confidence 45788898876532211110 001111112 22567777776544 68899998876 222111000
Q ss_pred cccccceeEEEE--CC-EEEEEeeeCCeEEEEECCCCcee-eccccccCCCCCcEEEE--eCCeEEEEeCCCCeEEEEeC
Q 044903 240 RFSREAIDAVGW--KG-KLCLVNVKGAEGAVYDVVANTWD-DMREGMVRGWRGPVAAM--DEEVLYGIDENSCTLSKYDE 313 (387)
Q Consensus 240 ~~~~~~~~~v~~--~g-~lyv~gg~~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~--~~g~ly~~g~~~~~v~~yd~ 313 (387)
.....+.+ ++ .+++.++.+..+.+||..+.+-. .+.. ...+....+++. .++++++.++.++.|.+||.
T Consensus 170 ----~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 170 ----AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGC-SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp ----SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred ----CceEEEEecCCCCCceeeeccccccccccccccceeeeeec-ceeeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 11222222 33 46666777788999999876533 2221 111111122332 25678888888899999999
Q ss_pred CCCceEEccccccccCceeEEEe--CC-eEEEEecCCceEEEEEecCC
Q 044903 314 VMDDWKEVVKSDLLKGARHAAAG--GG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~~~--~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+.+ .+..+.........+.+ ++ ++++.|+.++.|.+||...+
T Consensus 245 ~~~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 245 KSTS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp CC----CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred CCCc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 7653 23233333333222222 34 56777777888999998754
No 89
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.28 E-value=0.044 Score=51.34 Aligned_cols=183 Identities=14% Similarity=0.057 Sum_probs=97.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.+++.|+.+ ..+.+||..+.+-... +........++.+ ++..++.|+.+. .+.+||..+
T Consensus 161 ~~~~l~sgs~D-------~~i~iwd~~~~~~~~~--~~~h~~~V~~v~~~p~~~~l~s~s~D~--------~i~~wd~~~ 223 (410)
T 1vyh_C 161 SGKLLASCSAD-------MTIKLWDFQGFECIRT--MHGHDHNVSSVSIMPNGDHIVSASRDK--------TIKMWEVQT 223 (410)
T ss_dssp TSSEEEEEETT-------SCCCEEETTSSCEEEC--CCCCSSCEEEEEECSSSSEEEEEETTS--------EEEEEETTT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCceeEE--EcCCCCCEEEEEEeCCCCEEEEEeCCC--------eEEEEECCC
Confidence 56677776643 3567788876543321 1111111111222 456666666543 788899888
Q ss_pred CccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE--------
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-------- 293 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-------- 293 (387)
+. -...-.-.. .....+. -+|.+++.|+.+..+.+||..+......-...... -.+++.
T Consensus 224 ~~----~~~~~~~h~-----~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~~~ 292 (410)
T 1vyh_C 224 GY----CVKTFTGHR-----EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHV--VECISWAPESSYSS 292 (410)
T ss_dssp CC----EEEEEECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC--EEEEEECCSCGGGG
T ss_pred Cc----EEEEEeCCC-----ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCce--EEEEEEcCcccccc
Confidence 76 322110010 0111222 25677777777788999998776543211000000 001111
Q ss_pred -------------eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 294 -------------DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 -------------~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..+.+.+.++.++.|.+||..+.. .+.......... .....+++.++.|+.++.+.+||..+.
T Consensus 293 ~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 293 ISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp GGGCCSCC-------CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTS
T ss_pred hhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 125567777788999999997763 222222222222 223346777888888899999999754
No 90
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.27 E-value=0.058 Score=49.52 Aligned_cols=170 Identities=14% Similarity=0.035 Sum_probs=98.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCC--CCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE--LKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~--~~~~ 239 (387)
..+..+++.......+.+-. .+ ..+.+. .++.||+.--. ...+..+++.... -+.+.. +..+
T Consensus 53 ~~I~~i~~~g~~~~~~~~~~-~~-~~~l~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~----~~~~~~~~~~~p 118 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLNNL-EN-AIALDFHHRRELVFWSDVT--------LDRILRANLNGSN----VEEVVSTGLESP 118 (349)
T ss_dssp SCEEEECTTSCCEEEEECSC-SC-EEEEEEETTTTEEEEEETT--------TTEEEEEETTSCS----CEEEECSSCSCC
T ss_pred cceEEEeCCCCeeEEeecCC-Cc-eEEEEEeccccEEEEEecc--------CCceEEEecCCCC----ceEEEeCCCCCc
Confidence 34677777776665543211 11 122222 36789987432 2378888888765 444421 2111
Q ss_pred cccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe--CCeEEEEeCCC-CeEEEEeCC
Q 044903 240 RFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--EEVLYGIDENS-CTLSKYDEV 314 (387)
Q Consensus 240 ~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~g~ly~~g~~~-~~v~~yd~~ 314 (387)
. ..++- .++.||+.......|.++|++...-+.+.. .....+ .+++. ++.||+.+... +.|++++++
T Consensus 119 ~-----glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 119 G-----GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp C-----EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred c-----EEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 1 12222 378999987666789999987654333221 111122 34444 68999998655 789999998
Q ss_pred CCceEEccccccccCceeEEE--eCCeEEEEecCCceEEEEEec
Q 044903 315 MDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~~~~~--~~~~l~v~gg~~~~i~v~d~~ 356 (387)
...-+.+... ....+.+++. .+++||+.-.....|.++|..
T Consensus 191 G~~~~~~~~~-~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 191 GSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp SCSCEESCCS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCcEEEEEC-CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 7544443221 1222344444 378888886666778888876
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.25 E-value=0.014 Score=54.05 Aligned_cols=186 Identities=12% Similarity=0.011 Sum_probs=96.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCc--------------eeeeEEeeCCEEEEEecCCCCCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPR--------------RWCAAGYSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r--------------~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
++..++.++.+ ..+.+||..+.+-...-...... .....+...+..+++|+.+.
T Consensus 160 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----- 227 (425)
T 1r5m_A 160 DGTHIISMDVE-------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKG----- 227 (425)
T ss_dssp TSSEEEEEETT-------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGG-----
T ss_pred CCCEEEEEecC-------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCC-----
Confidence 45555555532 35788888777654321111110 01122222334455655433
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEE
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
.+.+||..+.+.. ..+.....+. ...+..-++++++.++....+.+||..+.+-...-... ...-.++
T Consensus 228 ---~i~~~d~~~~~~~---~~~~~~~~~i----~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~ 295 (425)
T 1r5m_A 228 ---AIFVYQITEKTPT---GKLIGHHGPI----SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH--SQSIVSA 295 (425)
T ss_dssp ---CEEEEETTCSSCS---EEECCCSSCE----EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCC--SSCEEEE
T ss_pred ---eEEEEEcCCCcee---eeeccCCCce----EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCC--CccEEEE
Confidence 6889998877621 1121111110 01122225666667666678999998765432211111 1111233
Q ss_pred EEe-CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCcee--EEEeCCeEEEEecCCceEEEEEecCC
Q 044903 292 AMD-EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 292 ~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.. ++ +++.++.++.+.+||..+.+-.. .......... ....+++++++++.++.+.+||+...
T Consensus 296 ~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 296 SWVGDD-KVISCSMDGSVRLWSLKQNTLLA--LSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp EEETTT-EEEEEETTSEEEEEETTTTEEEE--EEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred EECCCC-EEEEEeCCCcEEEEECCCCcEeE--ecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 333 44 66666778999999997764322 2222222222 22346788888888889999999854
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.25 E-value=0.022 Score=51.80 Aligned_cols=171 Identities=13% Similarity=0.045 Sum_probs=92.1
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
..+.+||..+.+-...-.-........+..-++++++.|+.+. .+.+||..+.. -...-.-..
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~--------~v~~wd~~~~~----~~~~~~~h~----- 226 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDA--------SAKLWDVREGM----CRQTFTGHE----- 226 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCS----EEEEECCCS-----
T ss_pred CcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCC--------cEEEEECCCCe----eEEEEcCCc-----
Confidence 4578889887754331111111111111222567777777644 67889988776 222111010
Q ss_pred cceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCC-cEEE-EeCCeEEEEeCCCCeEEEEeCCCCceE
Q 044903 244 EAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRG-PVAA-MDEEVLYGIDENSCTLSKYDEVMDDWK 319 (387)
Q Consensus 244 ~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~-~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~ 319 (387)
....++.+ ++.+++.|+.+..+.+||..+.+-...-. ....... .+++ ..++++.+.++.++.|.+||..+..
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-- 303 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYS-HDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-- 303 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEc-cCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc--
Confidence 11222332 56777777777889999998764221111 0000001 1222 2356788888888999999987643
Q ss_pred EccccccccCceeE--EEeCCeEEEEecCCceEEEEE
Q 044903 320 EVVKSDLLKGARHA--AAGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 320 ~v~~~~~~~~~~~~--~~~~~~l~v~gg~~~~i~v~d 354 (387)
.+.....+.....+ ...+|+.++.|+.++.+.+||
T Consensus 304 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 304 RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 33333333333222 234677788877788888875
No 93
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.24 E-value=0.0041 Score=57.20 Aligned_cols=191 Identities=11% Similarity=0.048 Sum_probs=97.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.+++.|+.+ ..+.+||..++.|+.+..+........+..+ ++++++.|+.+. .+.+||..+
T Consensus 22 ~g~~l~~~~~d-------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~--------~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTAT-------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDR--------NAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSS-------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTS--------SEEEC----
T ss_pred CCCEEEEecCC-------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCC--------eEEEEEcCC
Confidence 56666666532 4678899999888877666532222222222 456666666543 577777766
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCc-eeecccccc-CCCCCcEEEE-eCCeE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMV-RGWRGPVAAM-DEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~-~~~~~~~~~~-~~g~l 298 (387)
.. .|.....+.... .....+.+ ++++.+.++....+.+||..+.+ |........ ....-.+++. .++++
T Consensus 87 ~~---~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 160 (377)
T 3dwl_C 87 DG---TWKQTLVLLRLN---RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVL 160 (377)
T ss_dssp -----CCCCEEECCCCS---SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSE
T ss_pred CC---ceeeeeEecccC---CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCE
Confidence 53 122222111110 11222322 56666676666788999988764 543332111 1111122332 25667
Q ss_pred EEEeCCCCeEEEEeCCCCceE----------------EccccccccCceeE--EEeCCeEEEEecCCceEEEEEecCC
Q 044903 299 YGIDENSCTLSKYDEVMDDWK----------------EVVKSDLLKGARHA--AAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~----------------~v~~~~~~~~~~~~--~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.++.++.+.+||..+.... .+... ........ ...+++.++.++.++.+.+||+.+.
T Consensus 161 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~ 237 (377)
T 3dwl_C 161 LAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAP 237 (377)
T ss_dssp EEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECST
T ss_pred EEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 777778899999998643321 11122 12222222 2347788888788889999999865
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.24 E-value=0.027 Score=52.35 Aligned_cols=191 Identities=13% Similarity=0.122 Sum_probs=99.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceee-----CCCCCC-CceeeeEEee-CC-EEEEEecCCCCCCCCCCceEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-----GPELVT-PRRWCAAGYS-RG-AVYVASGIGSQFSSDVAKSVE 217 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-----l~~~~~-~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~ 217 (387)
++.+++.|+.+ ..+.+||..++.... +..+.. ...-.+.+.. ++ .+++.|+.+. .+.
T Consensus 93 ~~~~l~s~s~d-------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--------~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSED-------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN--------VIL 157 (402)
T ss_dssp CTTEEEEEETT-------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS--------CEE
T ss_pred CCCEEEEEeCC-------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC--------EEE
Confidence 56677776632 457888888775422 111111 1111112222 23 5777776543 688
Q ss_pred EEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-Ee
Q 044903 218 KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MD 294 (387)
Q Consensus 218 vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~ 294 (387)
+||..+.+ ....-..... ......+.+ ++.+++.++.+..+.+||+.+.+-...-.....+.....++ ..
T Consensus 158 iwd~~~~~----~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (402)
T 2aq5_A 158 VWDVGTGA----AVLTLGPDVH---PDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVS 230 (402)
T ss_dssp EEETTTTE----EEEEECTTTC---CSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECS
T ss_pred EEECCCCC----ccEEEecCCC---CCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcC
Confidence 99998877 4322100000 011223333 67777777777899999998765332210011111112233 34
Q ss_pred CCeEEEEe---CCCCeEEEEeCCCCce-EEccccccccCceeEE-EeCCe-EEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGID---ENSCTLSKYDEVMDDW-KEVVKSDLLKGARHAA-AGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g---~~~~~v~~yd~~~~~W-~~v~~~~~~~~~~~~~-~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
++++++.+ ..++.|.+||..+..- ..............++ ..+++ +++.|+.++.+.+||+.+.
T Consensus 231 ~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 231 EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred CCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 67777777 5678899999976432 1111111112222222 33444 5556556889999999864
No 95
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.23 E-value=0.011 Score=59.73 Aligned_cols=185 Identities=11% Similarity=0.014 Sum_probs=104.9
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCC----Cceee-CC-CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPIC----RTWTF-GP-ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t----~~W~~-l~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
.++.||+.-. ....++++++.+ ..-.. +. .+..+.. .+....+++||++-.. ...|.+
T Consensus 416 ~~~~Ly~sD~-------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g-lavD~~~g~LY~tD~~--------~~~I~v 479 (699)
T 1n7d_A 416 ASNRIYWSDL-------SQRMICSTQLDRAHGVSSYDTVISRDIQAPDG-LAVDWIHSNIYWTDSV--------LGTVSV 479 (699)
T ss_dssp TTTEEEECCT-------TTTSBEEEESCCCCC-CCCCCBCCSCC--CCC-EECCCSSSBCEECCTT--------TSCEEE
T ss_pred ccCeEEEEec-------CCCeEEEEecCCCCCCcceEEEEeCCCCCcce-EEEEeeCCcEEEEecc--------CCeEEE
Confidence 3677888643 225688888875 11111 11 1112221 1111246789986322 236788
Q ss_pred EeCCCCccccCeEEcCC--CCCCcccccceeEEE--ECCEEEEEeeeC-CeEEEEECCCCceeecc-ccccCCCCCcEEE
Q 044903 219 WDLMNGEKNSRWEKTGE--LKDGRFSREAIDAVG--WKGKLCLVNVKG-AEGAVYDVVANTWDDMR-EGMVRGWRGPVAA 292 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~--~~~~~~~~~~~~~v~--~~g~lyv~gg~~-~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~ 292 (387)
+|+.... -+.+.. +..+ ...++ .+|.||+..... ..|+++++....-+.+. ..+ .+ ...++
T Consensus 480 ~d~dg~~----~~~l~~~~~~~P------~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l--~~-PnGla 546 (699)
T 1n7d_A 480 ADTKGVK----RKTLFREQGSKP------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI--QW-PNGIT 546 (699)
T ss_dssp EBSSSCC----EEEECCCSSCCC------CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC--SS-CCCEE
T ss_pred EecCCCc----eEEEEeCCCCCc------ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC--CC-ccEEE
Confidence 8887765 344322 1211 11222 367889875332 57888877543332221 111 11 12234
Q ss_pred E--eCCeEEEEeCCCCeEEEEeCCCCceEEcccc-ccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 293 M--DEEVLYGIDENSCTLSKYDEVMDDWKEVVKS-DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~--~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+ .+++||+.......|.++|++...-+.+... .....+.+++..++.||+.-..++.|.++|..++
T Consensus 547 vd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G 615 (699)
T 1n7d_A 547 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 615 (699)
T ss_dssp ECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTE
T ss_pred EeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCC
Confidence 3 3689999998778999999976544444332 2334456777788999999777889999997643
No 96
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.23 E-value=0.076 Score=47.25 Aligned_cols=106 Identities=6% Similarity=-0.119 Sum_probs=59.7
Q ss_pred CEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CC----eEEEEeCCCCeEEEEeCCCCc----------
Q 044903 253 GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE----VLYGIDENSCTLSKYDEVMDD---------- 317 (387)
Q Consensus 253 g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g----~ly~~g~~~~~v~~yd~~~~~---------- 317 (387)
+.+++.++....+..++........+.........-.+++.. ++ .+++.++.++.|.+||..+..
T Consensus 182 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 261 (351)
T 3f3f_A 182 PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLT 261 (351)
T ss_dssp CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----------
T ss_pred CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCccc
Confidence 566666666656666666666654333211111111233333 33 677777788999999987531
Q ss_pred ----------------------------------eEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 318 ----------------------------------WKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 318 ----------------------------------W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+.+............+ ..++++++.|+.++.+.+||+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 262 NSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp -----------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred ceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 12222222222222222 336788888888899999999854
No 97
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.22 E-value=0.019 Score=52.95 Aligned_cols=176 Identities=7% Similarity=-0.043 Sum_probs=97.0
Q ss_pred CccEEEeCCCCceeeCCCCC-CCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 164 TRPLIFDPICRTWTFGPELV-TPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
..+.+||..+.+....-... ....-.+.+.. ++.+++.|+.+. .+.+||..+.. ...+.......
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~~~~~ 163 (383)
T 3ei3_B 96 GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG--------ATTLRDFSGSV----IQVFAKTDSWD 163 (383)
T ss_dssp SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTT--------EEEEEETTSCE----EEEEECCCCSS
T ss_pred CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCC--------EEEEEECCCCc----eEEEeccCCCC
Confidence 35788888877766543221 11122222333 346666666543 68889988776 65554322110
Q ss_pred ccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CCe-EEEEeCCCCeEEEEeCCC---
Q 044903 241 FSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEV-LYGIDENSCTLSKYDEVM--- 315 (387)
Q Consensus 241 ~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g~-ly~~g~~~~~v~~yd~~~--- 315 (387)
.. -...+..-++.+.+.++....+.+||.....-..+.. ... .-.+++.. ++. +++.++.++.|.+||..+
T Consensus 164 ~~-v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--h~~-~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 164 YW-YCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKL--HKA-KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CC-EEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEEC--SSS-CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CC-eEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEecc--CCC-cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 00 0011222356677777777899999985443333321 111 11122322 344 777777889999999986
Q ss_pred -CceEEccccccccCcee-EE-Ee-CCeEEEEecCCceEEEEEecCC
Q 044903 316 -DDWKEVVKSDLLKGARH-AA-AG-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 316 -~~W~~v~~~~~~~~~~~-~~-~~-~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..... ... ...... +. .- +++.++.++.++.+.+||..+.
T Consensus 240 ~~~~~~--~~~-~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 240 KNSYIA--EMP-HEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp TTCEEE--EEE-CSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred ccceEE--Eec-CCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 32222 111 222222 22 23 6788888888899999998854
No 98
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.21 E-value=0.065 Score=50.33 Aligned_cols=186 Identities=11% Similarity=0.082 Sum_probs=99.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CC-EEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RG-AVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
+++.+++++... ....++++|..+.+...+...+.. ..+.+.. ++ +|++.+..+. ...+.++|..+
T Consensus 189 dg~~la~~s~~~----~~~~i~~~d~~tg~~~~l~~~~~~--~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~ 256 (415)
T 2hqs_A 189 DGSKLAYVTFES----GRSALVIQTLANGAVRQVASFPRH--NGAPAFSPDGSKLAFALSKTG------SLNLYVMDLAS 256 (415)
T ss_dssp TSSEEEEEECTT----SSCEEEEEETTTCCEEEEECCSSC--EEEEEECTTSSEEEEEECTTS------SCEEEEEETTT
T ss_pred CCCEEEEEEecC----CCcEEEEEECCCCcEEEeecCCCc--ccCEEEcCCCCEEEEEEecCC------CceEEEEECCC
Confidence 555555554322 225789999999887766543321 1122222 34 4554544322 23689999999
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCE-EEEEeeeC--CeEEEEECCCCceeeccccccCCCCCcEEE-EeCCe
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGK-LCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEV 297 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~-lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ 297 (387)
.+ ...+...... ...+.+ +|+ |++.+... ..++.+|+.+..-..+... +.....++ ..+|+
T Consensus 257 ~~----~~~l~~~~~~------~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~---~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 257 GQ----IRQVTDGRSN------NTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWE---GSQNQDADVSSDGK 323 (415)
T ss_dssp CC----EEECCCCSSC------EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCS---SSEEEEEEECTTSS
T ss_pred CC----EEeCcCCCCc------ccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecC---CCcccCeEECCCCC
Confidence 88 7666533211 222222 565 44443222 4788889887765444321 11111222 22444
Q ss_pred -EEEEeCC--CCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCc---eEEEEEecCC
Q 044903 298 -LYGIDEN--SCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGG---GIVVVDVKAA 358 (387)
Q Consensus 298 -ly~~g~~--~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~---~i~v~d~~~~ 358 (387)
|++.... ...|++||.++.+...+.... ........-+|+.+++++... .++++|+...
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~--~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEECCCSS--SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEecCCC--CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 4444433 247999999998876654322 112223344677666655432 7899998744
No 99
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.20 E-value=0.041 Score=51.30 Aligned_cols=170 Identities=14% Similarity=0.037 Sum_probs=98.0
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCC--CCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGE--LKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~--~~~~ 239 (387)
..+..+++.......+.+-. ....+.+. .++.||++--. ...+..+++.... .+.+.. +..+
T Consensus 96 ~~I~~i~~~~~~~~~~~~~~--~~~~gl~~d~~~~~ly~~D~~--------~~~I~r~~~~g~~----~~~~~~~~~~~p 161 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNNL--ENAIALDFHHRRELVFWSDVT--------LDRILRANLNGSN----VEEVVSTGLESP 161 (386)
T ss_dssp SCEEEECTTSCCCEEEECSC--SCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCC----EEEEECSSCSCC
T ss_pred ccceeeccCCCcEEEEecCC--CccEEEEEecCCCeEEEEeCC--------CCcEEEEecCCCC----cEEEEeCCCCCc
Confidence 45677888776665543211 11122222 36789988432 2378888988776 555432 2111
Q ss_pred cccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe--CCeEEEEeCCC-CeEEEEeCC
Q 044903 240 RFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--EEVLYGIDENS-CTLSKYDEV 314 (387)
Q Consensus 240 ~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~g~ly~~g~~~-~~v~~yd~~ 314 (387)
. ..++- .++.||+.......|.+++++...-+.+.. .+...+ .+++. ++.||+.+... +.|++++++
T Consensus 162 ----~-glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 162 ----G-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ----C-CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ----c-EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 1 12222 378999987666788999887544332221 111122 33443 68999998655 789999998
Q ss_pred CCceEEccccccccCceeEEE--eCCeEEEEecCCceEEEEEec
Q 044903 315 MDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~~~~~--~~~~l~v~gg~~~~i~v~d~~ 356 (387)
...-+.+... ....+.+++. .+++||+.-.....|.++|..
T Consensus 234 G~~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 234 GSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SCSCEEEECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCcEEEEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 6544433221 1222334444 477888886666777777766
No 100
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.20 E-value=0.12 Score=46.71 Aligned_cols=183 Identities=11% Similarity=-0.032 Sum_probs=108.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCc---eeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRT---WTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~---W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
++.||+..-. ...++++++.... +.....+..+. ..+....+++||+.-.. ...++++|+.
T Consensus 46 ~~~lyw~D~~-------~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~--------~~~I~~~~~d 109 (318)
T 3sov_A 46 HGLIYWSDVS-------EEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSE--------TNRIEVSNLD 109 (318)
T ss_dssp GTEEEEEETT-------TTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCEEEEEECC-------CCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECC--------CCEEEEEECC
Confidence 5789887532 2567888887652 21111222222 12222247899998543 2378889887
Q ss_pred CCccccCeEEc--CCCCCCcccccceeEEE--ECCEEEEEe-eeCCeEEEEECCCCceeec-cccccCCCCCcEEEEe--
Q 044903 223 NGEKNSRWEKT--GELKDGRFSREAIDAVG--WKGKLCLVN-VKGAEGAVYDVVANTWDDM-REGMVRGWRGPVAAMD-- 294 (387)
Q Consensus 223 t~~~~~~W~~~--~~~~~~~~~~~~~~~v~--~~g~lyv~g-g~~~~i~~yD~~~~~W~~~-~~~~~~~~~~~~~~~~-- 294 (387)
... =+.+ ..+..| ...++ .+|.||+.. +....|+.++++...=+.+ ...+.. ...+++.
T Consensus 110 G~~----~~~l~~~~~~~P------~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~---Pnglavd~~ 176 (318)
T 3sov_A 110 GSL----RKVLFWQELDQP------RAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYW---PNGLTLDYE 176 (318)
T ss_dssp SCS----CEEEECSSCSSE------EEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSC---EEEEEEETT
T ss_pred CCc----EEEEEeCCCCCc------cEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCC---ccEEEEecc
Confidence 654 2332 222211 12222 358999886 3347899999864322222 221111 1234443
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++||+.+...+.|+++|.+...=+.+.. .....+.+++..++.+|+.-..+..|..+|..++
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G 239 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 239 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC-SCCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred CCEEEEEECCCCEEEEEcCCCCceEEEec-CCCCCceEEEEeCCEEEEEecCCCeEEEEECCCC
Confidence 78999999878899999997644333332 1234467788889999999777889999998644
No 101
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.20 E-value=0.058 Score=49.81 Aligned_cols=135 Identities=13% Similarity=0.128 Sum_probs=77.9
Q ss_pred eEEEEeCCCCccccCeEEcC--CCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCC--ceeeccccccCCCC
Q 044903 215 SVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGWR 287 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~~ 287 (387)
.+.+||..+++ -...- ..+... ......+.+ ++.+++.|+.+..+.+||+... .-..+.. ..+ .
T Consensus 181 ~i~~wd~~~~~----~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--h~~-~ 251 (380)
T 3iz6_a 181 TCVLWDVTTGQ----RISIFGSEFPSGH--TADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--HEG-D 251 (380)
T ss_dssp CEEEECTTTCC----EEEEECCCSSSSC--CSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--CSS-C
T ss_pred cEEEEEcCCCc----EEEEeecccCCCC--ccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--cCC-C
Confidence 67889988876 33221 111111 011222333 5677788887789999998632 1222211 011 1
Q ss_pred CcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccc-----c--CceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 288 GPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLL-----K--GARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 288 ~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~-----~--~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
-.+++. .++..++.++.++.+.+||..+..-..+...... . -...+...+|++++.|+.++.+.+||....
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCC
Confidence 123333 3567788888899999999987654332211111 0 122344557888889888899999998643
No 102
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.19 E-value=0.078 Score=47.20 Aligned_cols=185 Identities=9% Similarity=0.042 Sum_probs=97.7
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++..++.|+.+ ..+.+||..+.+-.. +..-. ..-.+.+. -++++++.|+.+. .+.+||..
T Consensus 65 ~~~~~l~s~s~d-------~~i~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~ 127 (304)
T 2ynn_A 65 ARKNWIIVGSDD-------FRIRVFNYNTGEKVVDFEAHP--DYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWE 127 (304)
T ss_dssp GGGTEEEEEETT-------SEEEEEETTTCCEEEEEECCS--SCEEEEEECSSSSEEEEEETTS--------CEEEEEGG
T ss_pred CCCCEEEEECCC-------CEEEEEECCCCcEEEEEeCCC--CcEEEEEEcCCCCEEEEECCCC--------eEEEEECC
Confidence 355566666532 467888988765322 11111 11111222 2456666666543 67888887
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCCceee-ccccccCCCCCcEEEE---eC
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAM---DE 295 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~---~~ 295 (387)
++ +.....+... .....++.+ ++.+++.|+.+..+.+||..+..=.. +......+ ...+.. .+
T Consensus 128 ~~-----~~~~~~~~~h---~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~--v~~~~~~~~~~ 197 (304)
T 2ynn_A 128 NN-----WALEQTFEGH---EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERG--VNYVDYYPLPD 197 (304)
T ss_dssp GT-----TEEEEEECCC---CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTC--EEEEEECCSTT
T ss_pred CC-----cchhhhhccc---CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCc--EEEEEEEEcCC
Confidence 65 2222111100 011223333 45677777777889999986542111 11000000 111222 14
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.+.+.++.++.|.+||..+.+ .+.......... .+...++.+++.|+.++.+.+||..+.
T Consensus 198 ~~~l~s~s~D~~i~iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 198 KPYMITASDDLTIKIWDYQTKS--CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred CCEEEEEcCCCeEEEEeCCCCc--cceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 5667777788999999998763 233333233322 233346778888888899999998754
No 103
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.18 E-value=0.014 Score=52.65 Aligned_cols=190 Identities=11% Similarity=0.043 Sum_probs=103.3
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
-++.+|+.+.. ...+++||+.+++.+.+...........+..-++++|+...... .....+.+||+.+.
T Consensus 54 ~~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~----~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 54 RQGQLFLLDVF-------EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF----KSTGGIFAATENGD 122 (333)
T ss_dssp TTSCEEEEETT-------TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS----SSCCEEEEECTTSC
T ss_pred CCCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC----CCCceEEEEeCCCC
Confidence 36678887652 14689999999887764321111111222223678888764321 11247889999888
Q ss_pred ccccCeEE-cCCCCCCcccccceeEEEE--CCEEEEEeee------CCeEEEEECCCCceeeccccccCCCCCcEEEE-e
Q 044903 225 EKNSRWEK-TGELKDGRFSREAIDAVGW--KGKLCLVNVK------GAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-D 294 (387)
Q Consensus 225 ~~~~~W~~-~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~ 294 (387)
. -.. +....... ....+.+ +|++|+.... ...++.||+++++...+...... ...++. .
T Consensus 123 ~----~~~~~~~~~~~~----~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~i~~~~ 191 (333)
T 2dg1_A 123 N----LQDIIEDLSTAY----CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISV---ANGIALST 191 (333)
T ss_dssp S----CEEEECSSSSCC----CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESS---EEEEEECT
T ss_pred E----EEEEEccCccCC----cccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCc---ccceEECC
Confidence 7 542 22111111 1222222 6788886542 14688889887666554321111 112332 2
Q ss_pred CC-eEEEEeCCCCeEEEEeCCC--CceEEcc-----ccccccCceeEE-EeCCeEEEEecCCceEEEEEec
Q 044903 295 EE-VLYGIDENSCTLSKYDEVM--DDWKEVV-----KSDLLKGARHAA-AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 ~g-~ly~~g~~~~~v~~yd~~~--~~W~~v~-----~~~~~~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
++ .||+.+...+.|++||.++ .....+. ..+.......++ .-+|+||+....++.+.+||+.
T Consensus 192 dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 192 DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 34 5888876567899999854 3333221 111111122233 3467888886666788888875
No 104
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.18 E-value=0.081 Score=49.10 Aligned_cols=184 Identities=7% Similarity=-0.027 Sum_probs=97.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+-...-. .......+...++.+++.|+.+. .+.+||..+..
T Consensus 145 ~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~ 207 (401)
T 4aez_A 145 DGSFLSVGLGN-------GLVDIYDVESQTKLRTMA--GHQARVGCLSWNRHVLSSGSRSG--------AIHHHDVRIAN 207 (401)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEEEC--CCSSCEEEEEEETTEEEEEETTS--------EEEEEETTSSS
T ss_pred CCCEEEEECCC-------CeEEEEECcCCeEEEEec--CCCCceEEEEECCCEEEEEcCCC--------CEEEEecccCc
Confidence 55666666532 367889988776443211 11112223333566777776543 67888887433
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGI 301 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~ 301 (387)
.. -..+..... ....+.+ ++.+++.|+.+..+.+||..+..-...-.... ..-.+++.. ++.+++.
T Consensus 208 ~~--~~~~~~~~~------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~--~~v~~~~~~p~~~~ll~~ 277 (401)
T 4aez_A 208 HQ--IGTLQGHSS------EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHN--AAVKAVAWCPWQSNLLAT 277 (401)
T ss_dssp CE--EEEEECCSS------CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCS--SCCCEEEECTTSTTEEEE
T ss_pred ce--eeEEcCCCC------CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCc--ceEEEEEECCCCCCEEEE
Confidence 00 111111111 1222333 66777777777899999998753321111011 112234433 4467777
Q ss_pred eC--CCCeEEEEeCCCCceEEccccccccCceeE-EEeCCeEEEE--ecCCceEEEEEecCC
Q 044903 302 DE--NSCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGGRVCAV--CENGGGIVVVDVKAA 358 (387)
Q Consensus 302 g~--~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~~l~v~--gg~~~~i~v~d~~~~ 358 (387)
++ .++.|.+||..+.+-..... .......+ ...+++.+++ |..++.+.+||..+.
T Consensus 278 ~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~ 337 (401)
T 4aez_A 278 GGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS 337 (401)
T ss_dssp ECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT
T ss_pred ecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc
Confidence 64 68899999998764433221 11111222 2235555555 335788999998853
No 105
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.17 E-value=0.022 Score=50.89 Aligned_cols=187 Identities=7% Similarity=-0.056 Sum_probs=94.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+-...-.............-+++.++.|+.+. .+.+||..+++
T Consensus 24 ~~~~l~s~~~d-------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~--------~i~vwd~~~~~ 88 (304)
T 2ynn_A 24 TEPWVLTTLYS-------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE 88 (304)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC--------EEEEEECCCCc
Confidence 45566666532 3577888877653321111111111122223456666666543 78889988876
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGI 301 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~ 301 (387)
. -..+..-. ....++.+ ++.+.+.|+.+..+.++|..++. ............-.+++.. ++.+++.
T Consensus 89 ~---~~~~~~h~------~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 89 K---VVDFEAHP------DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp E---EEEEECCS------SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred E---EEEEeCCC------CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 1 11111111 11222222 45666667777889999986541 1111100001011233332 4567778
Q ss_pred eCCCCeEEEEeCCCCceEEccccccccCceeEEEe----CCeEEEEecCCceEEEEEecCC
Q 044903 302 DENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~----~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.++.|.+||..+..=...... ........+.+ ++.+++.|+.++.|.+||+.+.
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 218 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTT-GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEEC-CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT
T ss_pred EeCCCeEEEEECCCCCccceecc-CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC
Confidence 88899999999865421111010 11111112221 5567777777888888888754
No 106
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.16 E-value=0.081 Score=47.81 Aligned_cols=184 Identities=13% Similarity=0.035 Sum_probs=94.9
Q ss_pred CccEEEeCCCCceeeCCC-CCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCC-----
Q 044903 164 TRPLIFDPICRTWTFGPE-LVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELK----- 237 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~-~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~----- 237 (387)
..++++|+.+.+...... -........+..-++++||..... ..+.+||+...... -..+....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~--------~~v~~~~~~g~~~~--~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVAL--------HQVFKLDPHSKEGP--LLILGRSMQPGSD 138 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTT--------TEEEEECTTCSSCC--SEEESBTTBCCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCC--------CEEEEEeCCCCeEE--EEEecccCCCCCC
Confidence 368999998877654211 111111222222367899886542 36888988665100 22222110
Q ss_pred CCcccccceeEEEE--CCEEEEEee-eCCeEEEEECCCCceeeccc-cc-----cCCCCCc-EEEEe--CCeEEEEeCCC
Q 044903 238 DGRFSREAIDAVGW--KGKLCLVNV-KGAEGAVYDVVANTWDDMRE-GM-----VRGWRGP-VAAMD--EEVLYGIDENS 305 (387)
Q Consensus 238 ~~~~~~~~~~~v~~--~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~-~~-----~~~~~~~-~~~~~--~g~ly~~g~~~ 305 (387)
..... .....++- +|.+|+... ....+.+||+....-..+.. +. +.....+ .+++. ++.||+.+...
T Consensus 139 ~~~~~-~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~ 217 (329)
T 3fvz_A 139 QNHFC-QPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN 217 (329)
T ss_dssp TTCCS-SEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT
T ss_pred ccccC-CCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC
Confidence 00010 11223332 688999986 45789999965443333321 00 0111122 33333 38999999888
Q ss_pred CeEEEEeCCCCceEEccccc-cccCceeEEEeCCeEEEEec-------CCceEEEEEecCC
Q 044903 306 CTLSKYDEVMDDWKEVVKSD-LLKGARHAAAGGGRVCAVCE-------NGGGIVVVDVKAA 358 (387)
Q Consensus 306 ~~v~~yd~~~~~W~~v~~~~-~~~~~~~~~~~~~~l~v~gg-------~~~~i~v~d~~~~ 358 (387)
+.|.+||+++.+.......+ .......++...+.+++..| .+..+.++|..++
T Consensus 218 ~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 218 GRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp TEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred CEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 89999999866554432222 11222223323344444443 2357888886643
No 107
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.12 E-value=0.19 Score=50.58 Aligned_cols=203 Identities=17% Similarity=0.178 Sum_probs=116.5
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCC--------ceeeeEEeeCCEEEEEecCCCCCCCC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTP--------RRWCAAGYSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
.++.++.||+.... ..++.+|..|. .|+.-...+.. ....+.++.+++||+...
T Consensus 73 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~-------- 136 (677)
T 1kb0_A 73 PVVVDGIMYVSASW--------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW-------- 136 (677)
T ss_dssp CEEETTEEEEECGG--------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--------
T ss_pred CEEECCEEEEECCC--------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC--------
Confidence 34568899987652 46788999877 48875433210 112234567888888632
Q ss_pred CCceEEEEeCCCCccccCeEEcCC-CCCCcccccceeEEEECCEEEEEeee-----CCeEEEEECCCC--ceeecccccc
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGE-LKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVAN--TWDDMREGMV 283 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~-~~~~~~~~~~~~~v~~~g~lyv~gg~-----~~~i~~yD~~~~--~W~~~~~~~~ 283 (387)
...+..+|..|++.. |+.-.. -..... ......++.++++|+.... ...+.+||.+++ .|+.-.....
T Consensus 137 -dg~l~alD~~tG~~~--W~~~~~~~~~~~~-~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 212 (677)
T 1kb0_A 137 -DGRLIALDAATGKEV--WHQNTFEGQKGSL-TITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGD 212 (677)
T ss_dssp -TSEEEEEETTTCCEE--EEEETTTTCCSSC-BCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCC
T ss_pred -CCEEEEEECCCCCEE--eeecCCcCcCcCc-ccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCC
Confidence 136889999998866 886542 111001 1113345679999886542 357999999876 5875321111
Q ss_pred C------------------------------CCCCcEEEEeCCeEEEEeCCC------------------CeEEEEeCCC
Q 044903 284 R------------------------------GWRGPVAAMDEEVLYGIDENS------------------CTLSKYDEVM 315 (387)
Q Consensus 284 ~------------------------------~~~~~~~~~~~g~ly~~g~~~------------------~~v~~yd~~~ 315 (387)
. .|...+.-..++.||+-.++. +.|+.+|+++
T Consensus 213 ~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~T 292 (677)
T 1kb0_A 213 PSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDT 292 (677)
T ss_dssp TTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT
T ss_pred ccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCC
Confidence 0 011111112356777664321 2599999986
Q ss_pred C--ceEEcccccc-----ccCceeEE--EeCC---eEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 316 D--DWKEVVKSDL-----LKGARHAA--AGGG---RVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 316 ~--~W~~v~~~~~-----~~~~~~~~--~~~~---~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
. .|+.-..... ......++ ..+| ++++++..++.++++|..++ .-.|++
T Consensus 293 G~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG--~~l~~~ 353 (677)
T 1kb0_A 293 GKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG--KFISAK 353 (677)
T ss_dssp CCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC--CEEEEE
T ss_pred CCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC--CEeccc
Confidence 5 5765321110 01112222 2366 67777777889999998854 246776
No 108
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.0096 Score=54.35 Aligned_cols=149 Identities=8% Similarity=0.056 Sum_probs=86.0
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEEC----CEEEEEeeeCCeEEEEEC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWK----GKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~----g~lyv~gg~~~~i~~yD~ 270 (387)
+++.++.|+.+. .+.+||....+ +..+..+.... ....++.+. +.+.+.++.+..+.+||.
T Consensus 22 ~~~~l~~~~~dg--------~i~iw~~~~~~----~~~~~~~~~h~---~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 22 YGKRLATCSSDK--------TIKIFEVEGET----HKLIDTLTGHE---GPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp SSSEEEEEETTS--------CEEEEEEETTE----EEEEEEECCCS---SCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEECCC--------cEEEEecCCCc----ceeeeEecCCC---CcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 355556665433 57888887666 65544332111 113333332 666677777778999999
Q ss_pred CCCceeeccccccCCCCCcEEEEe-C--CeEEEEeCCCCeEEEEeCCCCceEEccccccccCc-eeEEEe----------
Q 044903 271 VANTWDDMREGMVRGWRGPVAAMD-E--EVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGA-RHAAAG---------- 336 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~-~--g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~-~~~~~~---------- 336 (387)
.+++|..+.........-.+++.. + +.+++.++.++.|.+||..+..-............ .++...
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 998876654321111111233332 2 56777777889999999987633222111112222 222222
Q ss_pred ----CCeEEEEecCCceEEEEEecCC
Q 044903 337 ----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 337 ----~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++..++.|+.++.+.+||....
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~ 192 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSD 192 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETT
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCC
Confidence 4788888888889999998743
No 109
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.10 E-value=0.02 Score=51.58 Aligned_cols=185 Identities=9% Similarity=-0.060 Sum_probs=97.8
Q ss_pred eCCE-EEEEcCccCCCCCCCCccEEEeC-CCCceeeCCC--CCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEe
Q 044903 145 LSGK-LILLAATTHNFNPALTRPLIFDP-ICRTWTFGPE--LVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 145 ~~~~-l~v~GG~~~~~~~~~~~~~vydp-~t~~W~~l~~--~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd 220 (387)
.++. .++.|+.+ ..+.+||. .+.+-..+.. ....... .+...+.+++.|+.+. .+.+||
T Consensus 66 ~~~~~~l~~~~~d-------g~i~~wd~~~~~~~~~~~~~~~~~~v~~--l~~~~~~~l~s~~~d~--------~i~iwd 128 (342)
T 1yfq_A 66 DNTDLQIYVGTVQ-------GEILKVDLIGSPSFQALTNNEANLGICR--ICKYGDDKLIAASWDG--------LIEVID 128 (342)
T ss_dssp ESSSEEEEEEETT-------SCEEEECSSSSSSEEECBSCCCCSCEEE--EEEETTTEEEEEETTS--------EEEEEC
T ss_pred CCCCcEEEEEcCC-------CeEEEEEeccCCceEeccccCCCCceEE--EEeCCCCEEEEEcCCC--------eEEEEc
Confidence 3566 66666632 46889999 8887766654 2222222 2222255556665533 677887
Q ss_pred CCC---------CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCC-Cc--eeeccccccCCCCC
Q 044903 221 LMN---------GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA-NT--WDDMREGMVRGWRG 288 (387)
Q Consensus 221 ~~t---------~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~-~~--W~~~~~~~~~~~~~ 288 (387)
..+ .+ - +..+... ..........+. ++.+.....+.+||..+ .. ......... ..-
T Consensus 129 ~~~~~~~~~~~~~~----~--~~~~~~~---~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~--~~i 196 (342)
T 1yfq_A 129 PRNYGDGVIAVKNL----N--SNNTKVK---NKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLK--YQI 196 (342)
T ss_dssp HHHHTTBCEEEEES----C--SSSSSSC---CCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCS--SCE
T ss_pred ccccccccccccCC----e--eeEEeeC---CceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCC--Cce
Confidence 765 33 1 1111111 011223333444 55555567899999987 33 222221111 112
Q ss_pred cEEEEe--CCeEEEEeCCCCeEEEEeCCCC--c--eEEccccccc---------cCceeEE--EeCCeEEEEecCCceEE
Q 044903 289 PVAAMD--EEVLYGIDENSCTLSKYDEVMD--D--WKEVVKSDLL---------KGARHAA--AGGGRVCAVCENGGGIV 351 (387)
Q Consensus 289 ~~~~~~--~g~ly~~g~~~~~v~~yd~~~~--~--W~~v~~~~~~---------~~~~~~~--~~~~~l~v~gg~~~~i~ 351 (387)
.+++.. ++.+++.++.++.+.+||.+.. . .+.+...... ......+ ..++++++.|+.++.+.
T Consensus 197 ~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIIS 276 (342)
T ss_dssp EEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEE
T ss_pred eEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEE
Confidence 233333 4677788878899999887654 1 1111111111 1122222 23677788877888999
Q ss_pred EEEecCC
Q 044903 352 VVDVKAA 358 (387)
Q Consensus 352 v~d~~~~ 358 (387)
+||+.+.
T Consensus 277 vwd~~~~ 283 (342)
T 1yfq_A 277 CWNLQTR 283 (342)
T ss_dssp EEETTTT
T ss_pred EEcCccH
Confidence 9999854
No 110
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.10 E-value=0.037 Score=50.69 Aligned_cols=172 Identities=13% Similarity=0.091 Sum_probs=91.9
Q ss_pred CccEEEeCCCCceeeCCCCCCCceee-eEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWC-AAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
..+.+||..+.+-...-.-....... ..... ++.+++.|+.+. .+.+||..+.+ ....-.....
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg--------~v~~wd~~~~~----~~~~~~~h~~-- 241 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK--------KAMVWDMRSGQ----CVQAFETHES-- 241 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS--------CEEEEETTTCC----EEEEECCCSS--
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEecCCCC--
Confidence 45778888877543211001111111 11111 346777777644 68899998877 4332211111
Q ss_pred cccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCce
Q 044903 242 SREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDW 318 (387)
Q Consensus 242 ~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W 318 (387)
...++.+ ++.+++.++.+..+.+||+.++.-...-..........+++ ..++++.+.++.++.|.+||..+..
T Consensus 242 ---~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~- 317 (354)
T 2pbi_B 242 ---DVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS- 317 (354)
T ss_dssp ---CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred ---CeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-
Confidence 1223333 56677777777889999998764322111000000111222 2356777777788999999986653
Q ss_pred EEccccccccCcee--EEEeCCeEEEEecCCceEEEEE
Q 044903 319 KEVVKSDLLKGARH--AAAGGGRVCAVCENGGGIVVVD 354 (387)
Q Consensus 319 ~~v~~~~~~~~~~~--~~~~~~~l~v~gg~~~~i~v~d 354 (387)
.+.....+..... ....+|+.++.|+.++.+.+||
T Consensus 318 -~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 318 -RVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp -EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred -eEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 2223322333322 2334778888877788887774
No 111
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.08 E-value=0.0095 Score=53.68 Aligned_cols=190 Identities=14% Similarity=0.205 Sum_probs=101.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCce-eeeEEee---CCEEEEEecCCCCCCCCCCceEEEEeC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGYS---RGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~-~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~vyd~ 221 (387)
++..++.|+.+ ..+.+||..+++...+..+..... -.+.+.. ++++++.|+.+. .+.+||.
T Consensus 24 ~g~~lasgs~D-------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~--------~v~iWd~ 88 (316)
T 3bg1_A 24 YGTRLATCSSD-------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDR--------KVIIWRE 88 (316)
T ss_dssp GGCEEEEEETT-------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTS--------CEEEECC
T ss_pred CCCEEEEEeCC-------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCC--------EEEEEEC
Confidence 45666666532 356778877664332222211111 1112221 256666766544 6888999
Q ss_pred CCCccccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCC-ceeeccccccCCCCCcEEEEe--
Q 044903 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMD-- 294 (387)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~-- 294 (387)
.+.+ |..+..+.... ....++.+ + |.+.+.|+.+..+.++|..+. .|..............+++..
T Consensus 89 ~~~~----~~~~~~~~~h~---~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 161 (316)
T 3bg1_A 89 ENGT----WEKSHEHAGHD---SSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPA 161 (316)
T ss_dssp SSSC----CCEEEEECCCS---SCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCC
T ss_pred CCCc----ceEEEEccCCC---CceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccc
Confidence 8877 75543222111 01222333 2 556666666678899998765 575332100000000011100
Q ss_pred ----------------CCeEEEEeCCCCeEEEEeCCC-CceEEccccccccCceeEEEe--C----CeEEEEecCCceEE
Q 044903 295 ----------------EEVLYGIDENSCTLSKYDEVM-DDWKEVVKSDLLKGARHAAAG--G----GRVCAVCENGGGIV 351 (387)
Q Consensus 295 ----------------~g~ly~~g~~~~~v~~yd~~~-~~W~~v~~~~~~~~~~~~~~~--~----~~l~v~gg~~~~i~ 351 (387)
.+++++.++.++.|.+||.++ ..|..+..+..+......+.+ + +++++.++.++.+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 162 VVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred cCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 134666777788999999864 467776655444443333332 2 26777777888899
Q ss_pred EEEecC
Q 044903 352 VVDVKA 357 (387)
Q Consensus 352 v~d~~~ 357 (387)
+||+..
T Consensus 242 iw~~~~ 247 (316)
T 3bg1_A 242 IWTCDD 247 (316)
T ss_dssp EEECSS
T ss_pred EEEccC
Confidence 998874
No 112
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.08 E-value=0.011 Score=54.81 Aligned_cols=174 Identities=9% Similarity=-0.063 Sum_probs=88.8
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
..+.+||..+.+-...-..........+..-+++.++.|+.+. .+.+||..+.+.. ..+......
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~--------~i~i~d~~~~~~~---~~~~~~~~~---- 291 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG--------TLRIWHGGNGNSQ---NCFYGHSQS---- 291 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS--------CEEEECSSSBSCS---EEECCCSSC----
T ss_pred CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCccc---eEecCCCcc----
Confidence 4678899887643221111111111111222455666666433 5788888776511 111111111
Q ss_pred cceeEEEE-CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCc----
Q 044903 244 EAIDAVGW-KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDD---- 317 (387)
Q Consensus 244 ~~~~~v~~-~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~---- 317 (387)
....+.. ++ +++.++....+.+||..+.+-...-.. . ...-.+++. .++++++.++.++.|.+||..+..
T Consensus 292 -i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~-~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 367 (425)
T 1r5m_A 292 -IVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIV-D-GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSR 367 (425)
T ss_dssp -EEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEEC-T-TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC---
T ss_pred -EEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEeccc-C-CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCcccee
Confidence 1222222 55 556666668899999977643222110 0 111112222 246677777778999999987654
Q ss_pred ---------e-----EEccccccccC--cee-E-EEeCCeEEEEecCCceEEEEEec
Q 044903 318 ---------W-----KEVVKSDLLKG--ARH-A-AAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 318 ---------W-----~~v~~~~~~~~--~~~-~-~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
| ..+........ ... + ...+++.+++++.++.+.+||+.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 368 SLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 1 12222222211 222 2 23367777787888889999876
No 113
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.08 E-value=0.031 Score=57.02 Aligned_cols=187 Identities=9% Similarity=-0.023 Sum_probs=98.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+....-...........-.-+++.++.|+.+. .+.+||..+++
T Consensus 24 ~~~~la~~~~~-------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------~i~vw~~~~~~ 88 (814)
T 3mkq_A 24 TEPWVLTTLYS-------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF--------RIRVFNYNTGE 88 (814)
T ss_dssp SSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS--------EEEEEETTTCC
T ss_pred CCCEEEEEeCC-------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC--------eEEEEECCCCc
Confidence 45555555521 4678888877654332111111111111222455666665533 78999998877
Q ss_pred cccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCC-ceeeccccccCCCCCcEEEEe--CCeEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVAN-TWDDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~-~W~~~~~~~~~~~~~~~~~~~--~g~ly~ 300 (387)
....-.-... ....+. -++...+.++....+.+||..++ .....-. .....-.+++.. ++.+++
T Consensus 89 ----~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 89 ----KVVDFEAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFE--GHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp ----EEEEEECCSS-----CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEE--CCSSCEEEEEEETTEEEEEE
T ss_pred ----EEEEEecCCC-----CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEc--CCCCcEEEEEEEcCCCCEEE
Confidence 4332211111 122222 25655566666678999998765 2222111 111111233333 456777
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccC-ceeEEEe--CCeEEEEecCCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKG-ARHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~-~~~~~~~--~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.++.++.|.+||..+..-........... ....... ++..+++|+.++.+.+||..+.
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 218 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK 218 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT
T ss_pred EEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 77788999999987653322211111111 1222223 7788888888889999998754
No 114
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.08 E-value=0.013 Score=53.95 Aligned_cols=176 Identities=11% Similarity=0.054 Sum_probs=86.9
Q ss_pred CccEEEeCCCCceeeCCCCCC-C--ceeeeEE-eeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVT-P--RRWCAAG-YSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~-~--r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
..+.+||..+++-........ . ..-.+.+ .-+++.++.|+.+. .+.+||..+.+ -...-.....
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg--------~v~iwd~~~~~----~~~~~~~h~~ 182 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF--------SVKVWDLSQKA----VLKSYNAHSS 182 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC--------eEEEEECCCCc----EEEEEcCCCC
Confidence 357788887765333222110 1 1111122 22566777776544 67889988876 3222111111
Q ss_pred cccccceeEEEE--CC-EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCC
Q 044903 240 RFSREAIDAVGW--KG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEV 314 (387)
Q Consensus 240 ~~~~~~~~~v~~--~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~ 314 (387)
...++.+ ++ .+++.++....+.+||+.+.+-..............+++.. ++.+++.+..++.|.+||..
T Consensus 183 -----~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 183 -----EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp -----CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred -----CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 1222222 33 35666666678999998876533221111111111123322 45678888788999999987
Q ss_pred CCceEEccccccccCceeEEE--eC-CeEEEEecCCceEEEEEecCC
Q 044903 315 MDDWKEVVKSDLLKGARHAAA--GG-GRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~~~~~--~~-~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.+ .+............+. .+ +++++.|+.++.|.+||...+
T Consensus 258 ~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 258 NPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp CGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred CCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 653 2222222222222222 23 466777777888999998854
No 115
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.08 E-value=0.02 Score=52.29 Aligned_cols=230 Identities=16% Similarity=0.095 Sum_probs=110.4
Q ss_pred CCCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCE-EEEEcCccCCCCCCCCcc--EEEeCCC
Q 044903 97 STPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGK-LILLAATTHNFNPALTRP--LIFDPIC 173 (387)
Q Consensus 97 ~~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-l~v~GG~~~~~~~~~~~~--~vydp~t 173 (387)
+..+.++.+|+.+.+...+...... .+. +-+..-+++ ||+...... ....+ |.+|+.+
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~~~--------~p~-------~l~~spdg~~l~~~~~~~~----~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAEVA--------NPS-------YLIPSADGKFVYSVNEFSK----DQAAVSAFAFDKEK 86 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEECS--------CCC-------SEEECTTSSEEEEEECCSS----TTCEEEEEEEETTT
T ss_pred CCCEEEEEEeCCCCCEEEeecccCC--------CCc-------eEEECCCCCEEEEEEccCC----CCCcEEEEEEeCCC
Confidence 3456677788888877655433110 010 112223444 665543210 12344 5556766
Q ss_pred CceeeCCCCCCC-ceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcC-------CCCCC-c-ccc
Q 044903 174 RTWTFGPELVTP-RRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG-------ELKDG-R-FSR 243 (387)
Q Consensus 174 ~~W~~l~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~-------~~~~~-~-~~~ 243 (387)
.+.+.+...+.. ......+.-++.+|+.+..+ ..+.+||..++.. ...+. .-+.+ + ...
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~--------~~v~~~~~~~~g~---~~~~~~~~~~~g~~~~~~~~~~~ 155 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTTNGKNIVTANYSG--------GSITVFPIGQDGA---LLPASDVIEFKGSGPDKERQTMP 155 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEECSSEEEEEETTT--------TEEEEEEBCTTSC---BCSCSEEEECCCCCSCTTTCSSC
T ss_pred CcEEEeeEeccCCCCcEEEEECCCEEEEEECCC--------CEEEEEEeCCCCc---CcccceeEEccCCCCCccccCCC
Confidence 777766544321 11222223334566664322 2678888765430 11111 00100 0 000
Q ss_pred cceeEEE-ECCE-EEEEeeeCCeEEEEECCCCce-------eec---c-ccccCCCCCcEEEE-eCC-eEEEEeCCCCeE
Q 044903 244 EAIDAVG-WKGK-LCLVNVKGAEGAVYDVVANTW-------DDM---R-EGMVRGWRGPVAAM-DEE-VLYGIDENSCTL 308 (387)
Q Consensus 244 ~~~~~v~-~~g~-lyv~gg~~~~i~~yD~~~~~W-------~~~---~-~~~~~~~~~~~~~~-~~g-~ly~~g~~~~~v 308 (387)
..+..+. -+|+ +|+.+.....+.+|+...+.- ... . .....+.....++. .+| .+|+....++.|
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred cceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 1122222 2565 776654447788887765442 111 0 00111111112332 234 588887667899
Q ss_pred EEEeCCCCceEEccccccc----cCceeE-EEeCCe-EEEEecC-CceEEEEEec
Q 044903 309 SKYDEVMDDWKEVVKSDLL----KGARHA-AAGGGR-VCAVCEN-GGGIVVVDVK 356 (387)
Q Consensus 309 ~~yd~~~~~W~~v~~~~~~----~~~~~~-~~~~~~-l~v~gg~-~~~i~v~d~~ 356 (387)
.+||.++.+.+.+...+.. .....+ ..-+|+ ||+.+.. .+.+.+||+.
T Consensus 236 ~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 236 IAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred EEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 9999988877665543221 112223 233565 6666555 5778898886
No 116
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.06 E-value=0.018 Score=53.05 Aligned_cols=145 Identities=8% Similarity=0.094 Sum_probs=79.6
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEEC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~ 270 (387)
++.+++.|+.+. .+.+||..+.+ -...-..+... ...... ++.+.+.++....+.+||.
T Consensus 111 ~~~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 173 (408)
T 4a11_B 111 DTGMFTSSSFDK--------TLKVWDTNTLQ----TADVFNFEETV-----YSHHMSPVSTKHCLVAVGTRGPKVQLCDL 173 (408)
T ss_dssp CTTCEEEEETTS--------EEEEEETTTTE----EEEEEECSSCE-----EEEEECSSCSSCCEEEEEESSSSEEEEES
T ss_pred CCcEEEEEeCCC--------eEEEeeCCCCc----cceeccCCCce-----eeeEeecCCCCCcEEEEEcCCCeEEEEeC
Confidence 445666666543 68889988876 43333222211 111111 3446677777788999999
Q ss_pred CCCceeeccccccCCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCc--eEEccc------------cccccCceeEE
Q 044903 271 VANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSKYDEVMDD--WKEVVK------------SDLLKGARHAA 334 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~-~g-~ly~~g~~~~~v~~yd~~~~~--W~~v~~------------~~~~~~~~~~~ 334 (387)
.+..-...-..... .-.+++.. ++ .+++.++.++.+.+||..+.. ...+.. ..........+
T Consensus 174 ~~~~~~~~~~~~~~--~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 174 KSGSCSHILQGHRQ--EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp SSSCCCEEECCCCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred CCcceeeeecCCCC--cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 76643211110010 11123322 23 377788888999999986542 222210 01112222222
Q ss_pred --EeCCeEEEEecCCceEEEEEecCC
Q 044903 335 --AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 335 --~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..+++.++.++.++.+.+||+.+.
T Consensus 252 ~~~~~~~~l~~~~~dg~i~vwd~~~~ 277 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDNRMRLWNSSNG 277 (408)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTC
T ss_pred EEcCCCCEEEEecCCCeEEEEECCCC
Confidence 336778888888889999999854
No 117
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.079 Score=46.65 Aligned_cols=105 Identities=9% Similarity=-0.077 Sum_probs=59.9
Q ss_pred EEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEEccccccc
Q 044903 249 VGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 249 v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~ 327 (387)
..-++. ++.++....+.+||..+.+-...-. .....-.+++.. +++ ++.++.++.|.+||.++.+-......+..
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 267 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE--GHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAI 267 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEE--CCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSS
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhh--cCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCc
Confidence 334677 5666666889999997654221111 011111233333 444 55666789999999988754443322211
Q ss_pred cCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 328 KGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.-.......+++ ++.++.++.+.+||+.+.
T Consensus 268 ~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 268 SIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp CEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred eEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 111222334666 556778899999999865
No 118
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.04 E-value=0.031 Score=50.42 Aligned_cols=178 Identities=10% Similarity=0.023 Sum_probs=93.4
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeC----CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSR----GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
..+.+||..+++............-.+.+... +.+++.|+.+. .+.+||..+.+.. -..+......
T Consensus 44 ~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg--------~i~iwd~~~~~~~--~~~~~~~~~~ 113 (357)
T 3i2n_A 44 GVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG--------NLHIWNLEAPEMP--VYSVKGHKEI 113 (357)
T ss_dssp EEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS--------CEEEECTTSCSSC--SEEECCCSSC
T ss_pred cEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCC--------eEEEEeCCCCCcc--EEEEEecccc
Confidence 46788998887765432222111112222222 46666666543 5788887765400 2222211111
Q ss_pred cccccceeEE-------EECCEEEEEeeeCCeEEEEECCCCc--eeeccccccC-CCCCcEEE-----EeCCeEEEEeCC
Q 044903 240 RFSREAIDAV-------GWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVR-GWRGPVAA-----MDEEVLYGIDEN 304 (387)
Q Consensus 240 ~~~~~~~~~v-------~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~-~~~~~~~~-----~~~g~ly~~g~~ 304 (387)
. .... .-++.+.+.++....+.+||+.+.. ...+...... .....+++ ..++.+++.++.
T Consensus 114 v-----~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 188 (357)
T 3i2n_A 114 I-----NAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD 188 (357)
T ss_dssp E-----EEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET
T ss_pred e-----EEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc
Confidence 1 1111 1256666677766789999998764 3333211110 00111222 136677777778
Q ss_pred CCeEEEEeCCCCceEEccccccccCceeEEEe----CCeEEEEecCCceEEEEEecCC
Q 044903 305 SCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 305 ~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~----~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.|.+||..+..-..... ......++... ++..+++|+.++.+.+||....
T Consensus 189 d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 189 NGDIKLFDLRNMALRWETN--IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp TSEEEEEETTTTEEEEEEE--CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred CCeEEEEECccCceeeecC--CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 8999999998875322211 11112223332 5777888777888999988743
No 119
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.04 E-value=0.21 Score=49.43 Aligned_cols=205 Identities=13% Similarity=0.102 Sum_probs=116.5
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeC-CCC--ceeeCCCCCC-----Cce---eeeEEe--eCCE----EEEEecC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDP-ICR--TWTFGPELVT-----PRR---WCAAGY--SRGA----VYVASGI 204 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp-~t~--~W~~l~~~~~-----~r~---~~~~~~--~~~~----iyv~GG~ 204 (387)
.++.++.||+.... ...++.+|. .|. .|+.-..... .++ ....++ .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL- 129 (599)
T ss_dssp CEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-
T ss_pred cEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-
Confidence 34568999997652 246888998 776 4887543321 111 122344 5666 887532
Q ss_pred CCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEee-----eCCeEEEEECCCC--ceee
Q 044903 205 GSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-----KGAEGAVYDVVAN--TWDD 277 (387)
Q Consensus 205 ~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg-----~~~~i~~yD~~~~--~W~~ 277 (387)
...+..+|..|++.. |+.-..-...... ....-++.+|++|+-++ ....+.+||.++. .|+.
T Consensus 130 --------dg~l~AlDa~TG~~~--W~~~~~~~~~~~~-~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 130 --------DGNVAALNAETGETV--WKVENSDIKVGST-LTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp --------TSEEEEEETTTCCEE--EEEECCCGGGTCB-CCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred --------CCEEEEEECCCCCEE--EeecCCCCCccce-eecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 126789999999866 9854321110011 11334567999887543 1358999999876 5874
Q ss_pred cccccc------------------------------------CCCCCcEEEEeCCeEEEEeCCC---------------C
Q 044903 278 MREGMV------------------------------------RGWRGPVAAMDEEVLYGIDENS---------------C 306 (387)
Q Consensus 278 ~~~~~~------------------------------------~~~~~~~~~~~~g~ly~~g~~~---------------~ 306 (387)
-..... ..|...+.....+.||+-.++. +
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccc
Confidence 321110 0111223333467788765542 4
Q ss_pred eEEEEeCCCC--ceEEcccccc-----ccCceeEEE---eCC---eEEEEecCCceEEEEEecCCCCCceeEEc
Q 044903 307 TLSKYDEVMD--DWKEVVKSDL-----LKGARHAAA---GGG---RVCAVCENGGGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 307 ~v~~yd~~~~--~W~~v~~~~~-----~~~~~~~~~---~~~---~l~v~gg~~~~i~v~d~~~~~~~~~W~~~ 367 (387)
.|+.+|+++. .|..-..... ......++. .+| ++++.+..++.++++|..++ ..+|+..
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~lw~~~ 350 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDG--ALVSANK 350 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTC--CEEEEEE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCC--CEeeccc
Confidence 7999999875 4765322111 011222333 356 57777667889999998743 3567763
No 120
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.04 E-value=0.0097 Score=54.10 Aligned_cols=182 Identities=13% Similarity=0.042 Sum_probs=96.4
Q ss_pred ccEEEeCCCCceeeCCCCCCC-ceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 165 RPLIFDPICRTWTFGPELVTP-RRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
.++.+|+.+++++.+...... .....+..-++++|+.+..+. ...+.+||..+++ ++.+.........
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~------~~~v~~~~~~~g~----~~~~~~~~~~~~~- 87 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD------EGGIAAWQIDGQT----AHKLNTVVAPGTP- 87 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT------EEEEEEEEEETTE----EEEEEEEEEESCC-
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC------CceEEEEEecCCc----EEEeeeeecCCCC-
Confidence 367778888887764322111 111122223677887764311 2368899988777 7665532111000
Q ss_pred cceeEEEECCE-EEEEeeeCCeEEEEECC-CCceeeccccccCC--------CCCc-EEE-EeCCeEEEEeCCCCeEEEE
Q 044903 244 EAIDAVGWKGK-LCLVNVKGAEGAVYDVV-ANTWDDMREGMVRG--------WRGP-VAA-MDEEVLYGIDENSCTLSKY 311 (387)
Q Consensus 244 ~~~~~v~~~g~-lyv~gg~~~~i~~yD~~-~~~W~~~~~~~~~~--------~~~~-~~~-~~~g~ly~~g~~~~~v~~y 311 (387)
-...+..-+|+ ||+.+.....+.+||.. ......+......+ ...+ .++ ..+|++|+.+...+.+.+|
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 01223333554 66665444678899885 33443332110100 0011 233 2356788887767889999
Q ss_pred eCC-CCceEEccccc--cccCc-eeEEEeCCe-EEEEecCCceEEEEEecC
Q 044903 312 DEV-MDDWKEVVKSD--LLKGA-RHAAAGGGR-VCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 312 d~~-~~~W~~v~~~~--~~~~~-~~~~~~~~~-l~v~gg~~~~i~v~d~~~ 357 (387)
|.+ +.+...+.... ..... ..++.-+|+ +|+.+..+..+.+||...
T Consensus 168 ~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 168 NVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 988 55555543221 11122 223344665 777766778888888773
No 121
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.03 E-value=0.29 Score=48.11 Aligned_cols=206 Identities=11% Similarity=0.079 Sum_probs=116.2
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeC-CCC--ceeeCCCCCC-----Cc---eeeeEEeeCCEEEEEecCCCCCCC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDP-ICR--TWTFGPELVT-----PR---RWCAAGYSRGAVYVASGIGSQFSS 210 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp-~t~--~W~~l~~~~~-----~r---~~~~~~~~~~~iyv~GG~~~~~~~ 210 (387)
.++.++.||+.... ...++.+|. .|. .|+.-..... .+ ...+.++.+++||+...
T Consensus 58 P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 123 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------- 123 (571)
T ss_dssp CEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-------
T ss_pred cEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-------
Confidence 34568999987652 246889998 776 4887443221 01 11234567889988642
Q ss_pred CCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeee-----CCeEEEEECCCC--ceeecccccc
Q 044903 211 DVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVAN--TWDDMREGMV 283 (387)
Q Consensus 211 ~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~-----~~~i~~yD~~~~--~W~~~~~~~~ 283 (387)
...+..+|..+++.. |+.-..-+..... .....++.++++|+-... ...+.+||.++. .|+.-.....
T Consensus 124 --dg~l~alD~~tG~~~--W~~~~~~~~~~~~-~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~ 198 (571)
T 2ad6_A 124 --NGHLLALDAKTGKIN--WEVEVCDPKVGST-LTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSD 198 (571)
T ss_dssp --TSEEEEEETTTCCEE--EEEECCCGGGTCB-CCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred --CCEEEEEECCCCCEE--EEecCCCCCccce-eccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCc
Confidence 126889999998865 9854321100001 112345679999886542 358999999876 6864321110
Q ss_pred -----------------------CC-------------CCCcEEEEeCCeEEEEeCC---------------CCeEEEEe
Q 044903 284 -----------------------RG-------------WRGPVAAMDEEVLYGIDEN---------------SCTLSKYD 312 (387)
Q Consensus 284 -----------------------~~-------------~~~~~~~~~~g~ly~~g~~---------------~~~v~~yd 312 (387)
.. |...+.-...+.+|+-.++ .+.|+.+|
T Consensus 199 ~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald 278 (571)
T 2ad6_A 199 DSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRD 278 (571)
T ss_dssp HHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEE
T ss_pred cccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEe
Confidence 00 0111111224678876542 13599999
Q ss_pred CCCC--ceEEccccc---c--ccCceeEEE--eCC---eEEEEecCCceEEEEEecCCCCCceeEEcC
Q 044903 313 EVMD--DWKEVVKSD---L--LKGARHAAA--GGG---RVCAVCENGGGIVVVDVKAAAAPTIFVVDT 368 (387)
Q Consensus 313 ~~~~--~W~~v~~~~---~--~~~~~~~~~--~~~---~l~v~gg~~~~i~v~d~~~~~~~~~W~~~~ 368 (387)
+++. .|+.-.... . ......++. .+| ++++++..++.++++|..++ ...|+...
T Consensus 279 ~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~~w~~~~ 344 (571)
T 2ad6_A 279 LDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENG--NLIVAEKV 344 (571)
T ss_dssp TTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTC--CEEEEEES
T ss_pred cCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCC--CEEeeecc
Confidence 9765 576532211 0 111222232 367 46777667788999998743 34687643
No 122
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.02 E-value=0.026 Score=51.79 Aligned_cols=190 Identities=10% Similarity=0.078 Sum_probs=95.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+||..+.+....-..+.......+..-++..++.||.+. .+.+|+...+.
T Consensus 75 d~~~l~s~s~D-------g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~--------~i~v~~~~~~~ 139 (354)
T 2pbi_B 75 DKRRIVSSSQD-------GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN--------KCSVYPLTFDK 139 (354)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS--------EEEEEECCCCT
T ss_pred CCCEEEEEeCC-------CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC--------CEEEEEEeccc
Confidence 34455555532 3567778766654432222211111222223566777777654 56777765432
Q ss_pred cccCeEEcCCCCCCc-ccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe---CCeEE
Q 044903 226 KNSRWEKTGELKDGR-FSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD---EEVLY 299 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~-~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~---~g~ly 299 (387)
=.......... .......++.+ ++...+.++.+..+.++|+++.+-...-.+-... -.++.+. ++.++
T Consensus 140 ----~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~--v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 140 ----NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGAD--VLCLDLAPSETGNTF 213 (354)
T ss_dssp ----TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC--EEEEEECCCSSCCEE
T ss_pred ----cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCC--eEEEEEEeCCCCCEE
Confidence 00000000000 00001122222 3444555555678999999877543221100000 1122221 35677
Q ss_pred EEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 300 GIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.++.+.+||..+.+.... ..........+ ..++..++.|+.++.+.+||+...
T Consensus 214 ~sgs~Dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~ 272 (354)
T 2pbi_B 214 VSGGCDKKAMVWDMRSGQCVQA--FETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRAD 272 (354)
T ss_dssp EEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EEEeCCCeEEEEECCCCcEEEE--ecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 7777889999999988754332 22222222222 236788888888888999998743
No 123
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.1 Score=45.99 Aligned_cols=186 Identities=9% Similarity=-0.027 Sum_probs=91.5
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
.++..++.|+.+ ..+.+||..+.+-...-..........+..-++++++.|+.+. .+.+||....
T Consensus 27 ~~~~~l~s~~~d-------g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~~~~~~~~ 91 (313)
T 3odt_A 27 VDDSKVASVSRD-------GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT--------MINGVPLFAT 91 (313)
T ss_dssp EETTEEEEEETT-------SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTCC
T ss_pred cCCCEEEEEEcC-------CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC--------eEEEEEeeec
Confidence 455556666532 4678888876654332111111111122222556666666543 4566665443
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-Ee-CCeEEEEe
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MD-EEVLYGID 302 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~-~g~ly~~g 302 (387)
.. ...+..+... ......+.+++.+.+.++....+.+||........... . . ....++ .. ++..++.+
T Consensus 92 ~~---~~~~~~~~~~---~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~--~-~-~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 92 SG---EDPLYTLIGH---QGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAH--N-A-SVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp TT---SCC-CEECCC---SSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECC--S-S-CEEEEEEEETTTTEEEEE
T ss_pred CC---CCcccchhhc---ccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccC--C-C-ceeEEEEccCCCCEEEEE
Confidence 20 1111111111 11133444567777777777889999933322222111 0 0 111222 22 56677777
Q ss_pred CCCCeEEEEeCCCCceEEccccccccC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.+.+||..+..- .+ ....... .......+++ ++.++.++.+.+||+.+.
T Consensus 162 ~~d~~i~i~d~~~~~~-~~-~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~ 215 (313)
T 3odt_A 162 SADKTIKLWQNDKVIK-TF-SGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG 215 (313)
T ss_dssp ETTSCEEEEETTEEEE-EE-CSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC
T ss_pred ECCCCEEEEecCceEE-EE-eccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCch
Confidence 7789999999432211 11 1111111 1223344667 667777889999998854
No 124
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.00 E-value=0.033 Score=50.40 Aligned_cols=187 Identities=9% Similarity=0.035 Sum_probs=99.2
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
+.+++.|+.+ ..+.+||..+.+-.. +..... .-.+.+.. ++.+++.|+.+. .+.+||..+
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~~~~~~~--~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKHYVGHGN--AINELKFHPRDPNLLLSVSKDH--------ALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEEEESCCS--CEEEEEECSSCTTEEEEEETTS--------CEEEEETTT
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeeeecCCCC--cEEEEEECCCCCCEEEEEeCCC--------eEEEEEeec
Confidence 4566666632 367888988765332 111111 11112222 556777776543 688999988
Q ss_pred CccccCeEEc-CCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceee-ccc---------cc--------
Q 044903 224 GEKNSRWEKT-GELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDD-MRE---------GM-------- 282 (387)
Q Consensus 224 ~~~~~~W~~~-~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~---------~~-------- 282 (387)
.+ -... ..+.... .....+.+ ++...+.++.+..+.+||..+.+-.. +.. ..
T Consensus 148 ~~----~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (366)
T 3k26_A 148 DT----LVAIFGGVEGHR---DEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIH 220 (366)
T ss_dssp TE----EEEEECSTTSCS---SCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEEC
T ss_pred Ce----EEEEeccccccc---CceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeec
Confidence 76 3322 1111110 11223333 46666677767789999998653211 000 00
Q ss_pred --------cCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCce------------EEccccccccC--ceeEEEeC--C
Q 044903 283 --------VRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDW------------KEVVKSDLLKG--ARHAAAGG--G 338 (387)
Q Consensus 283 --------~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W------------~~v~~~~~~~~--~~~~~~~~--~ 338 (387)
.....-.+++.. +.+++.++.++.|.+||..+..= ..+........ .......+ +
T Consensus 221 ~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 299 (366)
T 3k26_A 221 FPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ 299 (366)
T ss_dssp CCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS
T ss_pred cCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC
Confidence 011112234444 55677777789999999865421 11111111111 12223345 8
Q ss_pred eEEEEecCCceEEEEEecCC
Q 044903 339 RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 339 ~l~v~gg~~~~i~v~d~~~~ 358 (387)
++++.|+.++.+.+||+...
T Consensus 300 ~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 300 KMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp SEEEEECTTSCEEEEECCSS
T ss_pred cEEEEEecCCcEEEEECCCC
Confidence 88888888899999999854
No 125
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.99 E-value=0.02 Score=51.74 Aligned_cols=187 Identities=10% Similarity=0.007 Sum_probs=96.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCc--eeeCCCCCC--CceeeeEE-----eeCCEEEEEecCCCCCCCCCCceE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRT--WTFGPELVT--PRRWCAAG-----YSRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~--W~~l~~~~~--~r~~~~~~-----~~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
++..++.|+.+ ..+.+||..+.+ ...+..... .+...+.+ .-++.+++.|+.+. .+
T Consensus 128 ~~~~l~~~~~d-------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~--------~i 192 (357)
T 3i2n_A 128 GAPEIVTGSRD-------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG--------DI 192 (357)
T ss_dssp CCCEEEEEETT-------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS--------EE
T ss_pred CccEEEEEeCC-------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC--------eE
Confidence 45555665532 357888887764 333322221 11111111 13566666666533 68
Q ss_pred EEEeCCCCccccCeEEcCCCCCCcccccceeEEEE-----CCEEEEEeeeCCeEEEEECCCCcee-eccc-cc-cCCCCC
Q 044903 217 EKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW-----KGKLCLVNVKGAEGAVYDVVANTWD-DMRE-GM-VRGWRG 288 (387)
Q Consensus 217 ~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~-----~g~lyv~gg~~~~i~~yD~~~~~W~-~~~~-~~-~~~~~~ 288 (387)
.+||..+.+ -......... ...+.+ ++..++.++....+.+||..+..-. .+.. .. .....-
T Consensus 193 ~i~d~~~~~----~~~~~~~~~~------v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v 262 (357)
T 3i2n_A 193 KLFDLRNMA----LRWETNIKNG------VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTV 262 (357)
T ss_dssp EEEETTTTE----EEEEEECSSC------EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCE
T ss_pred EEEECccCc----eeeecCCCCc------eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCE
Confidence 899998877 3222211111 223333 5666677776678889987653211 0000 00 011111
Q ss_pred cEEEEe-CCe-EEEEeCCCCeEEEEeCCCCc-----------------eEEccccccccCceeEE--EeCCeEEE-EecC
Q 044903 289 PVAAMD-EEV-LYGIDENSCTLSKYDEVMDD-----------------WKEVVKSDLLKGARHAA--AGGGRVCA-VCEN 346 (387)
Q Consensus 289 ~~~~~~-~g~-ly~~g~~~~~v~~yd~~~~~-----------------W~~v~~~~~~~~~~~~~--~~~~~l~v-~gg~ 346 (387)
.+++.. ++. +++.++.++.|.+||..+.. +..+............+ ..+++.++ .++.
T Consensus 263 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~ 342 (357)
T 3i2n_A 263 WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSF 342 (357)
T ss_dssp EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEET
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecC
Confidence 223332 345 67777788999999987542 23333333233332222 33555555 5777
Q ss_pred CceEEEEEecC
Q 044903 347 GGGIVVVDVKA 357 (387)
Q Consensus 347 ~~~i~v~d~~~ 357 (387)
++.+.+||+.+
T Consensus 343 d~~i~iw~~~~ 353 (357)
T 3i2n_A 343 DQTVRVLIVTK 353 (357)
T ss_dssp TSEEEEEEECC
T ss_pred CCcEEEEECCC
Confidence 89999999984
No 126
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.025 Score=51.20 Aligned_cols=189 Identities=13% Similarity=0.105 Sum_probs=96.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCC--CceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPIC--RTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t--~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~ 221 (387)
++..++.|+.+ ..+.+||..+ ..++.+..+.........+.. ++.+++.|+.+. .+.+||.
T Consensus 118 ~g~~las~s~D-------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~--------~i~iW~~ 182 (330)
T 2hes_X 118 DGYYLATCSRD-------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDD--------TVRIWKD 182 (330)
T ss_dssp TSCEEEEEETT-------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEE
T ss_pred CCCEEEEEeCC-------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEC
Confidence 45566665532 3567888742 233332222111111112222 456677776644 6778887
Q ss_pred CCCccccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCC------ceeeccccccC--CCCCc
Q 044903 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVAN------TWDDMREGMVR--GWRGP 289 (387)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~------~W~~~~~~~~~--~~~~~ 289 (387)
.++. |..+..+.... .....+.+ + +...+.|+.+..+.+||.... .|..... +.. ...-.
T Consensus 183 ~~~~----~~~~~~~~~h~---~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~-~~~~h~~~v~ 254 (330)
T 2hes_X 183 YDDD----WECVAVLNGHE---GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI-LPDVHKRQVY 254 (330)
T ss_dssp ETTE----EEEEEEECCCS---SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE-CCSCCSSCEE
T ss_pred CCCC----eeEEEEccCCC---CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeee-cccccccceE
Confidence 7776 66554332111 01122222 2 334455555577788876432 3543322 111 11112
Q ss_pred EEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccc-cccC-ceeEEEe----CCeEEEEecCCceEEEEEecC
Q 044903 290 VAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSD-LLKG-ARHAAAG----GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 290 ~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~-~~~~-~~~~~~~----~~~l~v~gg~~~~i~v~d~~~ 357 (387)
+++...+.+++.++.++.|.+||..+..|..+.... .... ....+.. ++++++.|+.++.+.+||+.+
T Consensus 255 ~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 255 NVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 333334445666667899999999988887654322 1222 2222222 577888888899999999873
No 127
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.98 E-value=0.14 Score=47.75 Aligned_cols=178 Identities=10% Similarity=0.069 Sum_probs=96.3
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
+.+++||..|++..++-.+........++. -+++.++.|+.+. .+.+||..+.+ -.....-..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg--------~v~iWd~~~~~----~~~~~~~h~--- 189 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQK----RLRNMTSHS--- 189 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCS---
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCC--------eEEEEEcCCCc----EEEEEeCCC---
Confidence 468899999988766543332222222222 2567777776644 68999998876 222211111
Q ss_pred cccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc--eE
Q 044903 242 SREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDD--WK 319 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~--W~ 319 (387)
....+...++.+.+.|+....+..+|.........................++...+.++.++.+.+||..+.. +.
T Consensus 190 --~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~ 267 (420)
T 4gga_A 190 --ARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV 267 (420)
T ss_dssp --SCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC
T ss_pred --CceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce
Confidence 11445566777777777778888998876543221100011100111122345666677778899999987543 22
Q ss_pred EccccccccCcee-EE--EeCCeEEEEecC--CceEEEEEecCC
Q 044903 320 EVVKSDLLKGARH-AA--AGGGRVCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 320 ~v~~~~~~~~~~~-~~--~~~~~l~v~gg~--~~~i~v~d~~~~ 358 (387)
.+........... ++ ..++.+++++++ +..|.+||+.++
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~ 311 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG 311 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT
T ss_pred eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc
Confidence 2222222222222 22 225566665443 567888888754
No 128
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.97 E-value=0.014 Score=55.08 Aligned_cols=189 Identities=8% Similarity=-0.029 Sum_probs=98.9
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC-CCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~-~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
+.+++.|+.+ ..+.+||..+.+-..+-.+. ....-.+.+. .++.+++.|+.+. .+.+||..+
T Consensus 132 ~~~lasGs~d-------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~--------~v~iwd~~~ 196 (435)
T 4e54_B 132 PSTVAVGSKG-------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG--------TTRLQDFKG 196 (435)
T ss_dssp TTCEEEEETT-------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS--------CEEEEETTS
T ss_pred CCEEEEEeCC-------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC--------EEEEeeccC
Confidence 4455566532 35777887766543321111 1111112222 3456667776543 678899887
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe--CCeEEEE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD--EEVLYGI 301 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~ 301 (387)
+. -..+......... .......-++.+.+.|+....+.++|.....-..+.. ... .-.+++.. ++.+++.
T Consensus 197 ~~----~~~~~~~~~~~~~-~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~--h~~-~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 197 NI----LRVFASSDTINIW-FCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRM--HKK-KVTHVALNPCCDWFLAT 268 (435)
T ss_dssp CE----EEEEECCSSCSCC-CCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBC--CSS-CEEEEEECTTCSSEEEE
T ss_pred Cc----eeEEeccCCCCcc-EEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEec--ccc-eEEeeeecCCCceEEEE
Confidence 76 5444322111110 0011222367777777777889999987543222211 000 11122322 3457777
Q ss_pred eCCCCeEEEEeCCCCceEEc-cccccccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 302 DENSCTLSKYDEVMDDWKEV-VKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 302 g~~~~~v~~yd~~~~~W~~v-~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.++.|.+||..+..-... ............+ ..+|+.++.|+.++.|.+||+...
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~ 328 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQW 328 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSS
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCC
Confidence 77889999999876532211 1111122222222 236778888888889999998753
No 129
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.96 E-value=0.069 Score=49.56 Aligned_cols=187 Identities=15% Similarity=0.112 Sum_probs=97.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++..++.|+.+ ..+.+||..+.+-...-.-... .-.+.+. -++..++.|+.+. .+.+||..+.
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~s~s~d~--------~v~iwd~~~~ 197 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMILQGHEQ-DIYSLDYFPSGDKLVSGSGDR--------TVRIWDLRTG 197 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEccCCC-CEEEEEEcCCCCEEEEecCCC--------cEEEEECCCC
Confidence 56677766632 4678899887754332111111 1111222 2455556665543 6888999887
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCCceee-ccccc--cCCCCC--cEEEE-eC
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDD-MREGM--VRGWRG--PVAAM-DE 295 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~--~~~~~~--~~~~~-~~ 295 (387)
+ ....-..... ...+.+ ++++.+.|+.+..+.+||..+..-.. +.... ..+... .+++. .+
T Consensus 198 ~----~~~~~~~~~~------v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 198 Q----CSLTLSIEDG------VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp E----EEEEEECSSC------EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred e----eEEEEEcCCC------cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 6 4332221111 222222 67777787777889999998765322 11100 011111 12222 25
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEEcc----------ccccccCce-eE-EEeCCeEEEEecCCceEEEEEecCC
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKEVV----------KSDLLKGAR-HA-AAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~v~----------~~~~~~~~~-~~-~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++..+.++.++.|.+||..+..-.... ......... ++ ...+++.++.|+.++.+.+||..++
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~ 342 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG 342 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCC
Confidence 667777778899999998754221110 000111111 22 2335677777778889999998854
No 130
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.93 E-value=0.077 Score=47.48 Aligned_cols=190 Identities=12% Similarity=0.001 Sum_probs=102.3
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.++.||+.... ...++++|+.++. ......+ .+ -...+. -++++||+..... ...+..||+.+
T Consensus 41 ~~g~lyv~d~~-------~~~I~~~d~~g~~-~~~~~~~-~~-p~gia~~~dG~l~vad~~~~------~~~v~~~d~~~ 104 (306)
T 2p4o_A 41 PDGTIFVTNHE-------VGEIVSITPDGNQ-QIHATVE-GK-VSGLAFTSNGDLVATGWNAD------SIPVVSLVKSD 104 (306)
T ss_dssp TTSCEEEEETT-------TTEEEEECTTCCE-EEEEECS-SE-EEEEEECTTSCEEEEEECTT------SCEEEEEECTT
T ss_pred CCCCEEEEeCC-------CCeEEEECCCCce-EEEEeCC-CC-ceeEEEcCCCcEEEEeccCC------cceEEEEcCCC
Confidence 36678887531 2468899987642 2211111 11 122222 3578998864321 12577889888
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC---ceeeccc----cccCCCCCc-EEEEeC
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN---TWDDMRE----GMVRGWRGP-VAAMDE 295 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~---~W~~~~~----~~~~~~~~~-~~~~~~ 295 (387)
++ .+.+...+..++. ...+...++.+|+.......++++|+.+. .|..-.. ........+ .+...+
T Consensus 105 g~----~~~~~~~~~~~~~--~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg 178 (306)
T 2p4o_A 105 GT----VETLLTLPDAIFL--NGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG 178 (306)
T ss_dssp SC----EEEEEECTTCSCE--EEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET
T ss_pred Ce----EEEEEeCCCcccc--CcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCC
Confidence 88 7766555433221 11112235667876543468899998754 2321110 011111112 233445
Q ss_pred CeEEEEeCCCCeEEEEeCCC-CceEEccccccccCcee-EEEeCCeEEEEecCCceEEEEEec
Q 044903 296 EVLYGIDENSCTLSKYDEVM-DDWKEVVKSDLLKGARH-AAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~-~~W~~v~~~~~~~~~~~-~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.||+.....+.|++||.+. .+............... ++.-+|+|||....++.|.++|+.
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD 241 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC
Confidence 68999987778999999875 22211111111112222 334477898887667888888876
No 131
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.92 E-value=0.13 Score=45.34 Aligned_cols=190 Identities=8% Similarity=-0.006 Sum_probs=97.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCC----ceeeeEEeeCCEEEEE----ecCCCC-----CCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTP----RRWCAAGYSRGAVYVA----SGIGSQ-----FSSD 211 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~----r~~~~~~~~~~~iyv~----GG~~~~-----~~~~ 211 (387)
.++.+|+.... ...+.+||+.+++.+.+...... +....+..-++++|+. |..... ....
T Consensus 78 ~dg~l~v~~~~-------~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 78 KQGHLIACSHG-------LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp TTCCEEEEETT-------TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred CCCcEEEEecC-------CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccC
Confidence 36777776431 14689999988887765322111 1112223336789987 432100 0001
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECC-CCce-eeccc-cccCCC
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVV-ANTW-DDMRE-GMVRGW 286 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~-~~~W-~~~~~-~~~~~~ 286 (387)
....++.||+. ++ ...+..-.. . ..++.+ +|++++.+.....+.+||+. +++. ..... ....+.
T Consensus 151 ~~~~l~~~~~~-g~----~~~~~~~~~--~----~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 219 (296)
T 3e5z_A 151 PGRWVFRLAPD-GT----LSAPIRDRV--K----PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGK 219 (296)
T ss_dssp SSCEEEEECTT-SC----EEEEECCCS--S----EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSC
T ss_pred CCcEEEEECCC-CC----EEEeecCCC--C----CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCC
Confidence 12367888887 54 444321110 0 122333 57766444444789999986 4444 11111 011111
Q ss_pred CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE-EeCC-eEEEEecCCceEEEEEecCC
Q 044903 287 RGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 287 ~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
......-.+|+||+.. .+.|.+||++.+....+..... ....+. .-++ .||+.+ ...++.+++.+.
T Consensus 220 p~~i~~d~~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~~--~~~~~f~~~d~~~L~v~t--~~~l~~~~~~~~ 287 (296)
T 3e5z_A 220 TDGLRVDAGGLIWASA--GDGVHVLTPDGDELGRVLTPQT--TSNLCFGGPEGRTLYMTV--STEFWSIETNVR 287 (296)
T ss_dssp CCSEEEBTTSCEEEEE--TTEEEEECTTSCEEEEEECSSC--CCEEEEESTTSCEEEEEE--TTEEEEEECSCC
T ss_pred CCeEEECCCCCEEEEc--CCeEEEECCCCCEEEEEECCCC--ceeEEEECCCCCEEEEEc--CCeEEEEEcccc
Confidence 1112233467899887 6789999998665554443222 112122 2233 466663 357888888754
No 132
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.91 E-value=0.061 Score=49.44 Aligned_cols=106 Identities=11% Similarity=0.057 Sum_probs=60.4
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccc--c--CCCCCcEEEE-eCCeEEEEeCCC---CeEEEEeCCCCceEEccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGM--V--RGWRGPVAAM-DEEVLYGIDENS---CTLSKYDEVMDDWKEVVK 323 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~--~--~~~~~~~~~~-~~g~ly~~g~~~---~~v~~yd~~~~~W~~v~~ 323 (387)
++ +++.++....+.+||..+.+-...-... . ....-.+++. .++++++.++.+ +.|.+||..+.+-.....
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~ 275 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS 275 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec
Confidence 46 6666666688999999876432211110 0 0111122232 246667777667 899999997664222111
Q ss_pred ccc-----------ccCceeEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 324 SDL-----------LKGARHAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 324 ~~~-----------~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.+. .......+ ..+++.++.|+.++.+.+||+...
T Consensus 276 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 276 VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT
T ss_pred cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 110 22222222 336788888888899999999854
No 133
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.91 E-value=0.17 Score=44.63 Aligned_cols=182 Identities=14% Similarity=0.090 Sum_probs=97.1
Q ss_pred EEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccc
Q 044903 148 KLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKN 227 (387)
Q Consensus 148 ~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~ 227 (387)
.+|+++... ..+++||+.++ .+.+.. +.......+..-++++|+..... ..+.+||+.+++
T Consensus 41 ~l~~~~~~~-------~~i~~~~~~~~-~~~~~~-~~~~~~~l~~~~dg~l~v~~~~~--------~~i~~~d~~~g~-- 101 (296)
T 3e5z_A 41 AVIFSDVRQ-------NRTWAWSDDGQ-LSPEMH-PSHHQNGHCLNKQGHLIACSHGL--------RRLERQREPGGE-- 101 (296)
T ss_dssp EEEEEEGGG-------TEEEEEETTSC-EEEEES-SCSSEEEEEECTTCCEEEEETTT--------TEEEEECSTTCC--
T ss_pred EEEEEeCCC-------CEEEEEECCCC-eEEEEC-CCCCcceeeECCCCcEEEEecCC--------CeEEEEcCCCCc--
Confidence 478877532 46899999987 555432 11222222222367888765322 368899998888
Q ss_pred cCeEEcCCCCCCc-ccccceeEEEECCEEEEEe----ee-------------CCeEEEEECCCCceeeccccccCCCCCc
Q 044903 228 SRWEKTGELKDGR-FSREAIDAVGWKGKLCLVN----VK-------------GAEGAVYDVVANTWDDMREGMVRGWRGP 289 (387)
Q Consensus 228 ~~W~~~~~~~~~~-~~~~~~~~v~~~g~lyv~g----g~-------------~~~i~~yD~~~~~W~~~~~~~~~~~~~~ 289 (387)
...+....... ...-...++.-+|++|+.. .. ...++.||+. ++...+...... ..
T Consensus 102 --~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~ 175 (296)
T 3e5z_A 102 --WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK---PN 175 (296)
T ss_dssp --EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS---EE
T ss_pred --EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC---Cc
Confidence 76553221110 0000112233368899862 21 1478888887 554443321111 11
Q ss_pred EEEE-eCCeEEEEeCCCCeEEEEeCC-CCce-EEcccc-ccccCcee-EEEeCCeEEEEecCCceEEEEEec
Q 044903 290 VAAM-DEEVLYGIDENSCTLSKYDEV-MDDW-KEVVKS-DLLKGARH-AAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 290 ~~~~-~~g~ly~~g~~~~~v~~yd~~-~~~W-~~v~~~-~~~~~~~~-~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
.++. .++++++.+...+.|++||.+ +.+. ...... ........ ++.-+|+|||.. +..+.+||+.
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 2332 245656666666789999986 4444 211111 11111222 334578888886 6778888887
No 134
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.91 E-value=0.11 Score=47.62 Aligned_cols=200 Identities=8% Similarity=0.003 Sum_probs=98.8
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCc-------eeeCCCCCCCceeeeEEeeC----C---EEEEEecCCCC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPICRT-------WTFGPELVTPRRWCAAGYSR----G---AVYVASGIGSQ 207 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~-------W~~l~~~~~~r~~~~~~~~~----~---~iyv~GG~~~~ 207 (387)
++.....+++.|+.+ ..+.+||..+.+ -..+.....+. ......-+ + ++++.|+.+.
T Consensus 21 ~~~~~~~~l~s~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~g~~~~~l~s~~~dg- 91 (397)
T 1sq9_A 21 SVSACNSFTVSCSGD-------GYLKVWDNKLLDNENPKDKSYSHFVHKSGL-HHVDVLQAIERDAFELCLVATTSFSG- 91 (397)
T ss_dssp EEEECSSEEEEEETT-------SEEEEEESBCCTTCCGGGGEEEEECCTTCE-EEEEEEEEEETTTEEEEEEEEEETTS-
T ss_pred EEEecCCeEEEEcCC-------CEEEEEECCCcccccCCCcceEEecCCCcE-EEEEEecccccCCccccEEEEEcCCC-
Confidence 344444666666532 467888887766 22222111111 11111223 5 6777776543
Q ss_pred CCCCCCceEEEEeCCCCccc--cCeEEcCCCCCCcccccceeEEEE-----CCEE-EEEeeeCCeEEEEECCC------C
Q 044903 208 FSSDVAKSVEKWDLMNGEKN--SRWEKTGELKDGRFSREAIDAVGW-----KGKL-CLVNVKGAEGAVYDVVA------N 273 (387)
Q Consensus 208 ~~~~~~~~v~vyd~~t~~~~--~~W~~~~~~~~~~~~~~~~~~v~~-----~g~l-yv~gg~~~~i~~yD~~~------~ 273 (387)
.+.+||..+.+.. ..+..+...+...........+.. ++.. ++.++....+.+||..+ .
T Consensus 92 -------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 92 -------DLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp -------CEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred -------CEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 5778887766510 003333322100000011222333 4666 66776667899998876 3
Q ss_pred c---ee---eccc----cccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEEcccc-ccc---cCceeEE--Ee
Q 044903 274 T---WD---DMRE----GMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKEVVKS-DLL---KGARHAA--AG 336 (387)
Q Consensus 274 ~---W~---~~~~----~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-~~~---~~~~~~~--~~ 336 (387)
. |. .+.. .........+++.. ++ +++.++.++.+.+||..+.+-...... ... ......+ ..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 2 21 1100 00011112334433 45 777777889999999987643332221 001 2222222 33
Q ss_pred CCeEEEEecCC---ceEEEEEecCC
Q 044903 337 GGRVCAVCENG---GGIVVVDVKAA 358 (387)
Q Consensus 337 ~~~l~v~gg~~---~~i~v~d~~~~ 358 (387)
++++++.++.+ +.+.+||..+.
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTC
T ss_pred CCCEEEEEecCCCCceEEEEECCCC
Confidence 67788887766 88999998754
No 135
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.91 E-value=0.027 Score=52.22 Aligned_cols=147 Identities=11% Similarity=0.072 Sum_probs=81.1
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccc-ccceeEEEE--CC-EEEEEeeeCC---eEEEE
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS-REAIDAVGW--KG-KLCLVNVKGA---EGAVY 268 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~-~~~~~~v~~--~g-~lyv~gg~~~---~i~~y 268 (387)
+.+++.|+.+. .+.+||..+.+ -...-........ ......+.+ ++ .+++.++... .+.+|
T Consensus 178 ~~~l~~~~~dg--------~v~iwd~~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 178 AHVFASAGSSN--------FASIWDLKAKK----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW 245 (416)
T ss_dssp TTEEEEESSSS--------CEEEEETTTTE----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE
T ss_pred CcEEEEEcCCC--------CEEEEECCCCC----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE
Confidence 56777776543 68899998876 3332222210000 011223333 23 4666666555 89999
Q ss_pred ECCCCc--eeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCc--eeEEEeCC-eEE
Q 044903 269 DVVANT--WDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGA--RHAAAGGG-RVC 341 (387)
Q Consensus 269 D~~~~~--W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~~-~l~ 341 (387)
|..+.. -..+.. .....-.+++.. ++.+++.++.++.|.+||.++.+- +......... ......++ +++
T Consensus 246 d~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~--~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 246 DLRNANTPLQTLNQ--GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ--LSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp ETTSTTSCSBCCCS--CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE--EEEEECSSSCCCCEEECTTCTTEE
T ss_pred eCCCCCCCcEEeec--CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc--ceeecCCCCceEEEEECCCCCCEE
Confidence 998753 111110 011111233332 567777777889999999987643 2222222222 22223345 788
Q ss_pred EEecCCceEEEEEecCC
Q 044903 342 AVCENGGGIVVVDVKAA 358 (387)
Q Consensus 342 v~gg~~~~i~v~d~~~~ 358 (387)
+.++.++.+.+||+.+.
T Consensus 322 ~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQNL 338 (416)
T ss_dssp EECCSSSEEEEEESCCC
T ss_pred EEEecCCcEEEEEccCC
Confidence 88888899999999854
No 136
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.90 E-value=0.06 Score=47.80 Aligned_cols=193 Identities=12% Similarity=0.022 Sum_probs=101.1
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCC--C-CCceeeeEEe-eC-CEEEEEecCCCCCCCCCCceEEEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL--V-TPRRWCAAGY-SR-GAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~--~-~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
.++.+|+..............+++||+.+++++.+... . ....-.+.+. -+ +++||.... ..+.+|
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~---------~~l~~~ 97 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR---------LGLLVV 97 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT---------TEEEEE
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC---------CCEEEE
Confidence 36778887110000000124689999999888764320 0 0011112222 24 788887541 157889
Q ss_pred eCCCCccccCeEEc-CCCCCCcccccceeEEE--ECCEEEEEeeeC---------------CeEEEEECCCCceeecccc
Q 044903 220 DLMNGEKNSRWEKT-GELKDGRFSREAIDAVG--WKGKLCLVNVKG---------------AEGAVYDVVANTWDDMREG 281 (387)
Q Consensus 220 d~~t~~~~~~W~~~-~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~---------------~~i~~yD~~~~~W~~~~~~ 281 (387)
|+. ++ ...+ ......... .....+. -+|++|+.+... ..+..||+. .+...+...
T Consensus 98 d~~-g~----~~~~~~~~~~~~~~-~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~ 170 (314)
T 1pjx_A 98 QTD-GT----FEEIAKKDSEGRRM-QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTA 170 (314)
T ss_dssp ETT-SC----EEECCSBCTTSCBC-BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEE
T ss_pred eCC-CC----EEEEEeccCCCccc-cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccC
Confidence 998 77 6665 322211100 0111223 367898875432 468888886 555443221
Q ss_pred ccCCCCCcEEEEe-----CC-eEEEEeCCCCeEEEEeCC-CCceEEcc---ccccc--cCceeEE-EeCCeEEEEecCCc
Q 044903 282 MVRGWRGPVAAMD-----EE-VLYGIDENSCTLSKYDEV-MDDWKEVV---KSDLL--KGARHAA-AGGGRVCAVCENGG 348 (387)
Q Consensus 282 ~~~~~~~~~~~~~-----~g-~ly~~g~~~~~v~~yd~~-~~~W~~v~---~~~~~--~~~~~~~-~~~~~l~v~gg~~~ 348 (387)
... ...++.. ++ .||+.+...+.|++||.+ +.+..... ..+.. .....++ .-+|.||+....++
T Consensus 171 ~~~---~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~ 247 (314)
T 1pjx_A 171 FQF---PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS 247 (314)
T ss_dssp ESS---EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT
T ss_pred CCC---cceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC
Confidence 111 1223333 34 588887667889999976 34433211 11111 1122233 34688988866677
Q ss_pred eEEEEEec
Q 044903 349 GIVVVDVK 356 (387)
Q Consensus 349 ~i~v~d~~ 356 (387)
.+.+||+.
T Consensus 248 ~i~~~d~~ 255 (314)
T 1pjx_A 248 HIEVFGPD 255 (314)
T ss_dssp EEEEECTT
T ss_pred EEEEEcCC
Confidence 89999887
No 137
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=96.90 E-value=0.0004 Score=63.54 Aligned_cols=42 Identities=24% Similarity=0.292 Sum_probs=36.1
Q ss_pred CCCCCCChHHHHHHHhhhcC---hhhHHHhhHhhhhhccCCCCCC
Q 044903 40 QPLLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPP 81 (387)
Q Consensus 40 ~~~~~~LP~dl~~~iL~rLP---~~~~r~Vck~W~~li~s~~f~~ 81 (387)
...|..||+|++.+||.+|+ +.+++.|||+|+.++.++..+.
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~ 50 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhe
Confidence 35688999999999999999 6677899999999998887643
No 138
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.89 E-value=0.093 Score=49.27 Aligned_cols=198 Identities=13% Similarity=0.005 Sum_probs=108.8
Q ss_pred eEEE-eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 141 QLVS-LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 141 ~~~~-~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
.++. .++.||+.... ...+.++|+.+++-..+.... .....+....++.+|+....+. ..+.++
T Consensus 135 ~la~d~~g~lyv~d~~-------~~~I~~id~~~g~~~~~~~~~-~~~~ia~~~~g~~l~~~d~~~~-------~~I~~~ 199 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-------DPRVRLISVDDNKVTTVHPGF-KGGKPAVTKDKQRVYSIGWEGT-------HTVYVY 199 (409)
T ss_dssp EEEECSTTEEEEEETT-------TTEEEEEETTTTEEEEEEETC-CBCBCEECTTSSEEEEEBSSTT-------CEEEEE
T ss_pred EEEEeCCCCEEEEecC-------CCcEEEEECCCCEEEEeeccC-CCCceeEecCCCcEEEEecCCC-------ceEEEE
Confidence 3444 46788888652 256899999988766543221 1111222223456777644322 178888
Q ss_pred eCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeecc---ccccCCCC-CcEEEE
Q 044903 220 DLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMR---EGMVRGWR-GPVAAM 293 (387)
Q Consensus 220 d~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~---~~~~~~~~-~~~~~~ 293 (387)
|+.++. ....+......... ..+..++. +|.||+... ...+..||+.+..-..+. .....++. ...+++
T Consensus 200 d~~~~~---~~~~~g~~~~~~~~-~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~ 274 (409)
T 3hrp_A 200 MKASGW---APTRIGQLGSTFSG-KIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIY 274 (409)
T ss_dssp EGGGTT---CEEEEEECCTTSCS-CCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEE
T ss_pred EcCCCc---eeEEeeeccchhcC-CcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEE
Confidence 887653 12233111110000 01222332 689999533 457999999877654441 10111221 114554
Q ss_pred e--CCeEEEEeCCCCeEEEEeCCCCceEEcccc------------ccccCceeEEE-eCCeEEEEec-CCceEEEEEecC
Q 044903 294 D--EEVLYGIDENSCTLSKYDEVMDDWKEVVKS------------DLLKGARHAAA-GGGRVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 294 ~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~------------~~~~~~~~~~~-~~~~l~v~gg-~~~~i~v~d~~~ 357 (387)
. ++.||+.+...+.|++||++...-...... ..+..+..++. -+|+|||.-. .++.|..+|+..
T Consensus 275 ~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~ 354 (409)
T 3hrp_A 275 YFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD 354 (409)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT
T ss_pred eCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC
Confidence 4 589999988788999999876522222211 00122334443 4678999977 788899999543
Q ss_pred C
Q 044903 358 A 358 (387)
Q Consensus 358 ~ 358 (387)
+
T Consensus 355 G 355 (409)
T 3hrp_A 355 G 355 (409)
T ss_dssp T
T ss_pred C
Confidence 3
No 139
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.86 E-value=0.14 Score=46.12 Aligned_cols=168 Identities=11% Similarity=0.031 Sum_probs=94.1
Q ss_pred CccEEEeCCCCceeeC-CCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCC----CccccCeEEc-C-
Q 044903 164 TRPLIFDPICRTWTFG-PELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMN----GEKNSRWEKT-G- 234 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l-~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t----~~~~~~W~~~-~- 234 (387)
+.+.++|+.+.....+ +.+.. -.+.+. .+++||+.... ...+.++|+.. .. -..+ .
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~---p~g~~~d~~~~~ly~~D~~--------~~~I~~~~~~g~~~~~~----~~~~~~~ 74 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRN---VVALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS----YDTVISR 74 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSS---EEEEEEETTTTEEEEEETT--------TTEEEEEEC------------CEEEECS
T ss_pred CeEEEEECCCcceEehhcCCCc---eEEEEEEeCCCEEEEEECC--------CCcEEEEECCCCCCCcc----cEEEEeC
Confidence 3567777777665553 22221 122232 25789998543 23778888876 22 2222 1
Q ss_pred CCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccc-cccCCCCCcEEEE--eCCeEEEEeCCC-CeE
Q 044903 235 ELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMRE-GMVRGWRGPVAAM--DEEVLYGIDENS-CTL 308 (387)
Q Consensus 235 ~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-~~~~~~~~~~~~~--~~g~ly~~g~~~-~~v 308 (387)
.+..+ ...++ .++.||+.......+.++|++...-+.+-. .+.. -..+++ .++.||+.+... +.|
T Consensus 75 ~~~~p------~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~---P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 75 DIQAP------DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSK---PRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp SCSCC------CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCC---EEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCCCc------CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCC---cceEEeCCCCCEEEEEccCCCCeE
Confidence 11111 22232 478999987666789999987653332221 1111 123444 368999998543 789
Q ss_pred EEEeCCCCceEEccccccccCceeEEEe--CCeEEEEecCCceEEEEEec
Q 044903 309 SKYDEVMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 309 ~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~ 356 (387)
++++++...=+.+... ....+.+++.. +++||+.-.....|.++|..
T Consensus 146 ~~~~~dG~~~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 146 KKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EEEETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEcCCCCCeEEEEEC-CCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 9999876543333221 22334445443 67899886667788888876
No 140
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.83 E-value=0.11 Score=50.63 Aligned_cols=142 Identities=11% Similarity=-0.047 Sum_probs=82.7
Q ss_pred CEEEEEecC-CCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 196 GAVYVASGI-GSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 196 ~~iyv~GG~-~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.++.|+. +. .+.+||..+.+ ... ..+.... .....+.+ +|++.+.++....+.+||..+
T Consensus 456 ~~~l~~~~~~d~--------~i~~~~~~~~~----~~~-~~~~~~~---~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEGN--------TIQVFKLSDLE----VSF-DLKTPLR---AKPSYISISPSETYIAAGDVMGKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTTS--------CEEEEETTEEE----EEE-ECSSCCS---SCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCEEEEeecCCC--------eEEEEECCCcc----ccc-cccCCcc---CceEEEEECCCCCEEEEcCCCCeEEEeeCCC
Confidence 555555554 33 68899998876 532 1111111 11333344 778777777778899999987
Q ss_pred CceeeccccccCCCCCcEEEE-e----------CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCc--eeEEEeCCe
Q 044903 273 NTWDDMREGMVRGWRGPVAAM-D----------EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGA--RHAAAGGGR 339 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-~----------~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~~~ 339 (387)
.+-...-.... ...-.+++. . ++++.+.++.++.|.+||.++.. ..+.....+... ......+++
T Consensus 520 ~~~~~~~~~~h-~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~h~~~v~~l~~s~~~~ 597 (615)
T 1pgu_A 520 REVKTSRWAFR-TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-KIIKALNAHKDGVNNLLWETPST 597 (615)
T ss_dssp TEEEECCSCCC-SSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-CCEEETTSSTTCEEEEEEEETTE
T ss_pred CcceeEeecCC-CCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-eechhhhcCccceEEEEEcCCCC
Confidence 64432211101 111122232 2 57788888888999999998752 112222222222 234456788
Q ss_pred EEEEecCCceEEEEEec
Q 044903 340 VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 340 l~v~gg~~~~i~v~d~~ 356 (387)
++.++.++.+.+||+.
T Consensus 598 -l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 598 -LVSSGADACIKRWNVV 613 (615)
T ss_dssp -EEEEETTSCEEEEEEC
T ss_pred -eEEecCCceEEEEeee
Confidence 7787888899999987
No 141
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.82 E-value=0.019 Score=61.79 Aligned_cols=186 Identities=11% Similarity=0.016 Sum_probs=102.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..+++|+.+ ..+.+||..+.+......-........+..-+++..+.|+.+. .+.+||..+++
T Consensus 972 ~g~~l~~g~~~-------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg--------~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 972 HLEYVAFGDED-------GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS--------VIQVWNWQTGD 1036 (1249)
T ss_dssp TSSEEEEEETT-------SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS--------BEEEEETTTTE
T ss_pred CCCEEEEEcCC-------CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCCc
Confidence 45555665532 4678889887654432111111111112222556666666543 68899999887
Q ss_pred cccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS 305 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~ 305 (387)
........... ...+...+..++.++....+.+||..+++-...-.. ..+.-.......+++.++.++.+
T Consensus 1037 ----~~~~~~~~~~v-----~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~-~~~~v~~~~~s~d~~~l~s~s~d 1106 (1249)
T 3sfz_A 1037 ----YVFLQAHQETV-----KDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTC-HQGTVLSCAISSDATKFSSTSAD 1106 (1249)
T ss_dssp ----EECCBCCSSCE-----EEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEEC-CSSCCCCEEECSSSSSCEEECCS
T ss_pred ----eEEEecCCCcE-----EEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcc-cCCcEEEEEECCCCCEEEEEcCC
Confidence 65443222111 222333333345556667899999987653221110 11111112223456677777788
Q ss_pred CeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 306 CTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 306 ~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.+.+||..+.. .+.......... .....+|++++.|+.++.+.+||+.++
T Consensus 1107 ~~v~iwd~~~~~--~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1107 KTAKIWSFDLLS--PLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp SCCCEECSSSSS--CSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred CcEEEEECCCcc--eeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999987653 222222222322 233457888888888889999999854
No 142
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.81 E-value=0.061 Score=48.44 Aligned_cols=198 Identities=11% Similarity=-0.039 Sum_probs=107.4
Q ss_pred eeEEEe--CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCC----CceeeeEEee-CCEEEEEecCCCCCC---
Q 044903 140 VQLVSL--SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT----PRRWCAAGYS-RGAVYVASGIGSQFS--- 209 (387)
Q Consensus 140 ~~~~~~--~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~----~r~~~~~~~~-~~~iyv~GG~~~~~~--- 209 (387)
+.++.. ++.||+.... ..+.++|+.+++.+.+..... .+....++.- ++.|||.-.......
T Consensus 83 ~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY--------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp EEEEEETTTTEEEEEETT--------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred ceEEEcCCCCcEEEEECC--------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 444444 5788887431 237889988776655432111 1112222233 578999753211000
Q ss_pred ------CCCCceEEEEeCCCCccccCeEEcC-CCCCCcccccceeEEEECC-EEEEEeeeCCeEEEEECCCC---ceeec
Q 044903 210 ------SDVAKSVEKWDLMNGEKNSRWEKTG-ELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVAN---TWDDM 278 (387)
Q Consensus 210 ------~~~~~~v~vyd~~t~~~~~~W~~~~-~~~~~~~~~~~~~~v~~~g-~lyv~gg~~~~i~~yD~~~~---~W~~~ 278 (387)
......+.+||+.+.+ ...+. .+..+. ..+..-+| .||+.......+.+||+... ..+..
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~----~~~~~~~~~~p~-----gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKE----TTLLLKELHVPG-----GAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTE----EEEEEEEESCCC-----EEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred ceehcccCCCceEEEEeCCCCE----EEEeccCCccCc-----ceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 0112468899998876 54432 111110 11222244 58887555578999998753 33332
Q ss_pred cccccCCCCCcEEEE-eCCeEEEEeCC----------CCeEEEEeCCCCceEEcccccc--ccCceeEEEeCCeEEEEec
Q 044903 279 REGMVRGWRGPVAAM-DEEVLYGIDEN----------SCTLSKYDEVMDDWKEVVKSDL--LKGARHAAAGGGRVCAVCE 345 (387)
Q Consensus 279 ~~~~~~~~~~~~~~~-~~g~ly~~g~~----------~~~v~~yd~~~~~W~~v~~~~~--~~~~~~~~~~~~~l~v~gg 345 (387)
.. .+ + ...+++ .+|.||+.... .+.|.+||++.+.-..+..... ......++..+++|||.+.
T Consensus 226 ~~-~~-g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~ 301 (322)
T 2fp8_A 226 VK-IP-N--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL 301 (322)
T ss_dssp EE-CS-S--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS
T ss_pred Ee-CC-C--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec
Confidence 21 11 1 112232 34689988643 3569999998665544443211 2333445557899999977
Q ss_pred CCceEEEEEecCC
Q 044903 346 NGGGIVVVDVKAA 358 (387)
Q Consensus 346 ~~~~i~v~d~~~~ 358 (387)
.+..|.++++..+
T Consensus 302 ~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 302 FHGSVGILVYDKK 314 (322)
T ss_dssp SCSEEEEEEC---
T ss_pred CCCceEEEecccc
Confidence 7889999998744
No 143
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.81 E-value=0.077 Score=47.45 Aligned_cols=142 Identities=14% Similarity=0.124 Sum_probs=78.0
Q ss_pred EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCc
Q 044903 197 AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 197 ~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
.+++.|+.+. .+.+||..+.+ -...-.-... ...++.+ ++++.+.|+.+..+.+||..+..
T Consensus 186 ~~~~s~~~d~--------~i~i~d~~~~~----~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~ 248 (340)
T 4aow_A 186 PIIVSCGWDK--------LVKVWNLANCK----LKTNHIGHTG-----YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 248 (340)
T ss_dssp CEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTCEEEEEETTTTE
T ss_pred cEEEEEcCCC--------EEEEEECCCCc----eeeEecCCCC-----cEEEEEECCCCCEEEEEeCCCeEEEEEeccCc
Confidence 4555555433 57888988776 3322111111 1222332 57777777777889999987654
Q ss_pred eeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccc-------cccCce-e-EEEeCCeEEEEec
Q 044903 275 WDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSD-------LLKGAR-H-AAAGGGRVCAVCE 345 (387)
Q Consensus 275 W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~-------~~~~~~-~-~~~~~~~l~v~gg 345 (387)
-...-. ....-.+++...+..++.++.++.|.+||.++..-......+ ...... + ....+|+.++.|+
T Consensus 249 ~~~~~~---~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 249 HLYTLD---GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp EEEEEE---CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred eeeeec---CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 321111 111112333333444555556889999999876433211111 111122 2 2234778888888
Q ss_pred CCceEEEEEecCC
Q 044903 346 NGGGIVVVDVKAA 358 (387)
Q Consensus 346 ~~~~i~v~d~~~~ 358 (387)
.++.|.+||++++
T Consensus 326 ~Dg~v~iW~~~tG 338 (340)
T 4aow_A 326 TDNLVRVWQVTIG 338 (340)
T ss_dssp TTSCEEEEEEEC-
T ss_pred CCCEEEEEeCCCc
Confidence 8899999999864
No 144
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.80 E-value=0.33 Score=48.91 Aligned_cols=116 Identities=16% Similarity=0.207 Sum_probs=71.4
Q ss_pred EEeCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCC--------ceeeeEEeeCCEEEEEecCCCCCCCCC
Q 044903 143 VSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTP--------RRWCAAGYSRGAVYVASGIGSQFSSDV 212 (387)
Q Consensus 143 ~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 212 (387)
++.++.||+.... ..++.+|..|. .|+.-...+.. ....+.++.+++||+...
T Consensus 67 ~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------- 129 (689)
T 1yiq_A 67 IVVDGVMYTTGPF--------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------- 129 (689)
T ss_dssp EEETTEEEEECGG--------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---------
T ss_pred EEECCEEEEEcCC--------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---------
Confidence 4578899987642 45888998877 48874433211 011234567888888642
Q ss_pred CceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeee-----CCeEEEEECCCC--ceee
Q 044903 213 AKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVAN--TWDD 277 (387)
Q Consensus 213 ~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~-----~~~i~~yD~~~~--~W~~ 277 (387)
...+..+|..|++.. |+.-...............++.+|++|+-.+. ...+.+||.++. .|+.
T Consensus 130 dg~l~AlDa~TG~~~--W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRA--WSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp TSEEEEEETTTCCEE--EEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCCEe--eeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 126889999998866 88654311111011113346679999875432 257999999877 4875
No 145
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.80 E-value=0.02 Score=51.64 Aligned_cols=143 Identities=8% Similarity=0.051 Sum_probs=81.1
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeC----CeEEEE
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKG----AEGAVY 268 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~----~~i~~y 268 (387)
++++|+.+..+. .+.+||+.+++ ...+....... ..++.+ +|++|+.+... ..+.+|
T Consensus 55 ~g~l~~~~~~~~--------~i~~~d~~~~~----~~~~~~~~~~~-----~~~i~~~~dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 55 QGQLFLLDVFEG--------NIFKINPETKE----IKRPFVSHKAN-----PAAIKIHKDGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp TSCEEEEETTTC--------EEEEECTTTCC----EEEEEECSSSS-----EEEEEECTTSCEEEEECTTSSSCCEEEEE
T ss_pred CCCEEEEECCCC--------EEEEEeCCCCc----EEEEeeCCCCC-----cceEEECCCCcEEEEeCCCCCCCceEEEE
Confidence 567888765432 68899999888 76543111111 222333 67888875433 478999
Q ss_pred ECCCCceeeccccccCCCCCcEEEE-eCCeEEEEeCC------CCeEEEEeCCCCceEEccccccccCceeEE-EeCC-e
Q 044903 269 DVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDEN------SCTLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGG-R 339 (387)
Q Consensus 269 D~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~-~ 339 (387)
|++++.-..+-.....+.....+++ .+|++|+.... .+.|++||+++.+.+.+... ......++ .-+| .
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKV 195 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSE
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCE
Confidence 9988765522110111111112222 35788887643 35799999987766654321 11122233 2344 4
Q ss_pred EEEEecCCceEEEEEec
Q 044903 340 VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 340 l~v~gg~~~~i~v~d~~ 356 (387)
||+.......+++||+.
T Consensus 196 l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 196 LWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCeEEEEEec
Confidence 77775556788888885
No 146
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.79 E-value=0.041 Score=49.41 Aligned_cols=194 Identities=10% Similarity=0.100 Sum_probs=99.4
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCcee-eeEEee-C--CEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRW-CAAGYS-R--GAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~-~~~~~~-~--~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
+.+++.|+.+ ..+.+||..+.+|..+..+...... .+.+.. + +.+++.|+.+. .+.+||..
T Consensus 71 ~~~l~s~s~D-------~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~ 135 (316)
T 3bg1_A 71 GNILASCSYD-------RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYT 135 (316)
T ss_dssp SSCEEEEETT-------SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEEC
T ss_pred CCEEEEEECC-------CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecC
Confidence 4566666532 4578889888776543222211111 111221 2 45666666543 56777776
Q ss_pred CC-ccccCeEEcCCCCCCcccccceeEEEE-------------------CCEEEEEeeeCCeEEEEECCC-Cceeecccc
Q 044903 223 NG-EKNSRWEKTGELKDGRFSREAIDAVGW-------------------KGKLCLVNVKGAEGAVYDVVA-NTWDDMREG 281 (387)
Q Consensus 223 t~-~~~~~W~~~~~~~~~~~~~~~~~~v~~-------------------~g~lyv~gg~~~~i~~yD~~~-~~W~~~~~~ 281 (387)
+. . |.....+...... ..++.+ ++++++.|+.+..+.++|... +.|..+...
T Consensus 136 ~~~~----~~~~~~~~~h~~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l 208 (316)
T 3bg1_A 136 GEGQ----WEVKKINNAHTIG---CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL 208 (316)
T ss_dssp SSSC----EEECCBTTSSSSC---BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC
T ss_pred CCCC----cceeeeeccccCC---cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec
Confidence 65 4 6543322111000 011111 134556666667888888864 457654321
Q ss_pred ccCCCCCcEEEEe-C----CeEEEEeCCCCeEEEEeCCC---CceEEccccccccCce-e-EEEeCCeEEEEecCCceEE
Q 044903 282 MVRGWRGPVAAMD-E----EVLYGIDENSCTLSKYDEVM---DDWKEVVKSDLLKGAR-H-AAAGGGRVCAVCENGGGIV 351 (387)
Q Consensus 282 ~~~~~~~~~~~~~-~----g~ly~~g~~~~~v~~yd~~~---~~W~~v~~~~~~~~~~-~-~~~~~~~l~v~gg~~~~i~ 351 (387)
......-.+++.. + +.+++.++.++.|.+||.++ ..|.... ........ + ....++++++.++.++.+.
T Consensus 209 ~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~-~~~~~~~v~~v~~sp~g~~las~~~D~~v~ 287 (316)
T 3bg1_A 209 EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKL-LHKFNDVVWHVSWSITANILAVSGGDNKVT 287 (316)
T ss_dssp BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCE-EEECSSCEEEEEECTTTCCEEEEESSSCEE
T ss_pred ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhh-hhcCCCcEEEEEEcCCCCEEEEEcCCCeEE
Confidence 1111001122221 2 25677777889999999876 3443211 11112222 2 2234678888888889999
Q ss_pred EEEecCCCCCceeEE
Q 044903 352 VVDVKAAAAPTIFVV 366 (387)
Q Consensus 352 v~d~~~~~~~~~W~~ 366 (387)
+||.... ..|..
T Consensus 288 lw~~~~~---g~~~~ 299 (316)
T 3bg1_A 288 LWKESVD---GQWVC 299 (316)
T ss_dssp EEEECTT---SCEEE
T ss_pred EEEECCC---CcEEE
Confidence 9998733 35763
No 147
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.79 E-value=0.5 Score=47.04 Aligned_cols=182 Identities=9% Similarity=-0.058 Sum_probs=111.8
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC--CCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV--TPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.||+.... ...++++++.....+.+.... .|. ..+....+++||++-.. ...++++|+.
T Consensus 47 ~~~~lywtD~~-------~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~--------~~~I~v~~~d 110 (628)
T 4a0p_A 47 TDNRIYWTDIS-------LKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTG--------TNRIEVSKLD 110 (628)
T ss_dssp TTTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCCEEEEEECC-------CCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECC--------CCEEEEEecC
Confidence 46889987542 256788888766555532222 222 12222257899998443 2478999987
Q ss_pred CCccccCeEEc--CCCCCCcccccceeEEEE--CCEEEEEe-eeCCeEEEEECCCCceeeccccccCCCCCc-EEEEe--
Q 044903 223 NGEKNSRWEKT--GELKDGRFSREAIDAVGW--KGKLCLVN-VKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD-- 294 (387)
Q Consensus 223 t~~~~~~W~~~--~~~~~~~~~~~~~~~v~~--~g~lyv~g-g~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~-- 294 (387)
... =+.+ ..+..| ...++- +|.||+.. |....|+..+++...-+.+-..+ ..+ .+++.
T Consensus 111 G~~----~~~l~~~~l~~P------~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~----~~P~GlalD~~ 176 (628)
T 4a0p_A 111 GQH----RQVLVWKDLDSP------RALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNV----GRANGLTIDYA 176 (628)
T ss_dssp STT----CEEEECSSCCCE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSC----SSEEEEEEETT
T ss_pred CCc----EEEEEeCCCCCc------ccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCC----CCcceEEEccc
Confidence 654 2222 222222 223332 68999986 33468999988765544433211 122 23333
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++||+.+...+.|.++|++...=+.+.. ....+++++..+++||+.-.....|.++|..++
T Consensus 177 ~~~LY~aD~~~~~I~~~d~dG~~~~v~~~--~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 177 KRRLYWTDLDTNLIESSNMLGLNREVIAD--DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEE--CCSCEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred cCEEEEEECCCCEEEEEcCCCCceEEeec--cCCCceEEEEECCEEEEecCCCCEEEEEECCCC
Confidence 68999999878899999987643232221 234567888889999999777889999997644
No 148
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.77 E-value=0.19 Score=45.16 Aligned_cols=146 Identities=10% Similarity=-0.020 Sum_probs=81.1
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCC
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+.+++.|+.+. .+.+||..+.+.. ..+.... ....++.+ ++.+++.++.+..+.+||..+
T Consensus 85 ~~~l~~~~~dg--------~i~v~d~~~~~~~---~~~~~~~------~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG--------IIRIINPITMQCI---KHYVGHG------NAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC--------EEEEECTTTCCEE---EEEESCC------SCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCEEEEecCCC--------EEEEEEchhceEe---eeecCCC------CcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 46777776543 7889998877611 1111111 11223333 567777777778899999987
Q ss_pred Cceeeccccc-cCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEcccc--------------------------
Q 044903 273 NTWDDMREGM-VRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKS-------------------------- 324 (387)
Q Consensus 273 ~~W~~~~~~~-~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-------------------------- 324 (387)
.+-...-... .....-.+++. .++..++.++.++.|.+||..+.+-......
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTR 227 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEEC
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccc
Confidence 6543321100 11111112222 2456667777789999999976532211000
Q ss_pred ccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 325 DLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 325 ~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
........++.+.+++++.++.++.+.+||+.+.
T Consensus 228 ~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 228 DIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp SSCSSCCCEEEEETTEEEEECSSSEEEEEEESST
T ss_pred cCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCc
Confidence 0022222333333778888788899999998854
No 149
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.76 E-value=0.2 Score=46.31 Aligned_cols=147 Identities=10% Similarity=0.037 Sum_probs=82.6
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEE-----cCCCCCCcccccceeEEEE--CC-EEEEEeeeCCeEE
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEK-----TGELKDGRFSREAIDAVGW--KG-KLCLVNVKGAEGA 266 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~-----~~~~~~~~~~~~~~~~v~~--~g-~lyv~gg~~~~i~ 266 (387)
++.+++.|+.+. .+.+||..++. ... +..+.. .......+.+ ++ .+++.++.+..+.
T Consensus 93 ~~~~l~s~s~dg--------~v~vw~~~~~~----~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSEDC--------TVMVWEIPDGG----LVLPLREPVITLEG---HTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CTTEEEEEETTS--------EEEEEECCTTC----CSSCBCSCSEEEEC---CSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred CCCEEEEEeCCC--------eEEEEEccCCC----CccccCCceEEecC---CCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 566777776543 68889988774 211 110100 0011222322 33 4666777778899
Q ss_pred EEECCCCceeecc--ccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEEcccccccc--CceeEEEeCCeEE
Q 044903 267 VYDVVANTWDDMR--EGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLK--GARHAAAGGGRVC 341 (387)
Q Consensus 267 ~yD~~~~~W~~~~--~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~--~~~~~~~~~~~l~ 341 (387)
+||..+++....- .... . .-.+++.. ++.+++.++.++.|.+||+.+.+-.......... ....+...+++++
T Consensus 158 iwd~~~~~~~~~~~~~~~~-~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHP-D-TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKIL 235 (402)
T ss_dssp EEETTTTEEEEEECTTTCC-S-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEE
T ss_pred EEECCCCCccEEEecCCCC-C-ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEE
Confidence 9999887554221 1111 1 11223322 5667777778899999999876533322111111 1233344578888
Q ss_pred EEe---cCCceEEEEEecCC
Q 044903 342 AVC---ENGGGIVVVDVKAA 358 (387)
Q Consensus 342 v~g---g~~~~i~v~d~~~~ 358 (387)
+.| ..+..+.+||..+.
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp EEEECTTCCEEEEEEETTBC
T ss_pred EEeccCCCCceEEEEcCccc
Confidence 887 56788999999854
No 150
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=96.75 E-value=0.00023 Score=63.01 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=35.4
Q ss_pred CCCCChHHHHHHHhhhcC---hhhHHHhhHhhhhhccCCCCCC
Q 044903 42 LLPGLPDHIAHLCLSHVH---PSILHNVCHSWRRLIYSPSFPP 81 (387)
Q Consensus 42 ~~~~LP~dl~~~iL~rLP---~~~~r~Vck~W~~li~s~~f~~ 81 (387)
.+..||+||+..||+.|+ ++++.+|||+|+.+.+++..++
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr 46 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWR 46 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHH
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHH
Confidence 456799999999999998 8888899999999999986654
No 151
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.75 E-value=0.1 Score=47.92 Aligned_cols=105 Identities=6% Similarity=-0.159 Sum_probs=60.0
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccc--ccC--CCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREG--MVR--GWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~--~~~--~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~ 327 (387)
++...+.++....+.+||..+.+-...... ... ...........+..++++..++.+.+||..+.+-. ......
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~--~~~~~~ 333 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQI--TMLKGH 333 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEE--EEECCC
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcce--eeeccC
Confidence 566666777677899999987653322110 000 00111222222334445556789999999775432 222222
Q ss_pred cCc--eeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 328 KGA--RHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~--~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
... ......++++++.|+.++.+.+||+...
T Consensus 334 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 334 YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 222 2233446788888888899999999865
No 152
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.74 E-value=0.25 Score=49.62 Aligned_cols=197 Identities=17% Similarity=0.177 Sum_probs=110.5
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCCc--------eeeeEEeeCCEEEEEecCCCCCCCC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPR--------RWCAAGYSRGAVYVASGIGSQFSSD 211 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~r--------~~~~~~~~~~~iyv~GG~~~~~~~~ 211 (387)
.++.++.||+.... ..++.+|..|. .|+.-+..+... ...+.++.+++||+...
T Consensus 62 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 125 (668)
T 1kv9_A 62 PLFHDGVIYTSMSW--------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL-------- 125 (668)
T ss_dssp CEEETTEEEEEEGG--------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT--------
T ss_pred CEEECCEEEEECCC--------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC--------
Confidence 34578899987642 45788888877 488744332110 11234556888887532
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeee-----CCeEEEEECCCC--ceeecc-cccc
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVAN--TWDDMR-EGMV 283 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~-----~~~i~~yD~~~~--~W~~~~-~~~~ 283 (387)
...+..+|..|++.. |+.-..-+..... .....++.++++|+-.+. ...+.+||.+++ .|+.-. ...+
T Consensus 126 -dg~l~alD~~tG~~~--W~~~~~~~~~~~~-~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p 201 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAI--WSQQTTDPAKPYS-ITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDP 201 (668)
T ss_dssp -TSEEEEEETTTCCEE--EEEECSCTTSSCB-CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCT
T ss_pred -CCEEEEEECCCCCEe--eeeccCCCCCcce-ecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCC
Confidence 126899999999866 9865422111111 113345679999876432 257999999876 587532 1001
Q ss_pred CC-------------C-------------CCcEEEE--eCCeEEEEeCCC------------------CeEEEEeCCCC-
Q 044903 284 RG-------------W-------------RGPVAAM--DEEVLYGIDENS------------------CTLSKYDEVMD- 316 (387)
Q Consensus 284 ~~-------------~-------------~~~~~~~--~~g~ly~~g~~~------------------~~v~~yd~~~~- 316 (387)
.. + ...+.++ .++.+|+-.++. +.|+.+|+++.
T Consensus 202 ~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~ 281 (668)
T 1kv9_A 202 ALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGK 281 (668)
T ss_dssp TSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCC
T ss_pred CccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCc
Confidence 00 0 0012233 246677654321 24999998775
Q ss_pred -ceEEcccccc-----ccCceeEE--EeCCe---EEEEecCCceEEEEEecCC
Q 044903 317 -DWKEVVKSDL-----LKGARHAA--AGGGR---VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 317 -~W~~v~~~~~-----~~~~~~~~--~~~~~---l~v~gg~~~~i~v~d~~~~ 358 (387)
.|+.-..... ......++ ..+|+ +++++..++.++++|..++
T Consensus 282 ~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 334 (668)
T 1kv9_A 282 LAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG 334 (668)
T ss_dssp EEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred eeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC
Confidence 5765332111 01112222 24665 5666667788999998754
No 153
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.74 E-value=0.4 Score=45.31 Aligned_cols=194 Identities=11% Similarity=-0.004 Sum_probs=98.4
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCC----ceeeCCC---C----CCCceeeeEEeeCCEEEEEecCCCCCCCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICR----TWTFGPE---L----VTPRRWCAAGYSRGAVYVASGIGSQFSSDVAK 214 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~----~W~~l~~---~----~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 214 (387)
...+|+-|.. .+.++++|..++ +-.+.-. + ...+.+...+.-++ |||....+. .++...
T Consensus 95 r~~l~v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~--~g~~~g 164 (462)
T 2ece_A 95 RRFLIVPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE--EGEGPG 164 (462)
T ss_dssp SCEEEEEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET--TSCSCC
T ss_pred CCEEEEccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc--CCCCCC
Confidence 4456665542 368999998877 2222110 1 11122333344455 877532221 234457
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeE-EEECCEEEEEee-------------------eCCeEEEEECCCCc
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDA-VGWKGKLCLVNV-------------------KGAEGAVYDVVANT 274 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~-v~~~g~lyv~gg-------------------~~~~i~~yD~~~~~ 274 (387)
.+.++|.+|.+..-+|.. ...+.. +. ... ..-++++++... ++..+.+||..+.
T Consensus 165 ~v~vlD~~T~~v~~~~~~-~~~~~~-~~---Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~- 238 (462)
T 2ece_A 165 GILMLDHYSFEPLGKWEI-DRGDQY-LA---YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR- 238 (462)
T ss_dssp EEEEECTTTCCEEEECCS-BCTTCC-CC---CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT-
T ss_pred eEEEEECCCCeEEEEEcc-CCCCcc-cc---ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC-
Confidence 899999998773222331 111111 00 101 122344444432 2478999999875
Q ss_pred eeeccccccCCC--CCcE-EEE----eCCeEEEEeC-----CCCeEEEEeCCCCceEEcccc--cc--------------
Q 044903 275 WDDMREGMVRGW--RGPV-AAM----DEEVLYGIDE-----NSCTLSKYDEVMDDWKEVVKS--DL-------------- 326 (387)
Q Consensus 275 W~~~~~~~~~~~--~~~~-~~~----~~g~ly~~g~-----~~~~v~~yd~~~~~W~~v~~~--~~-------------- 326 (387)
+.+.. +..+. ..+. +.. .+..+|+... .++.|++|..+..+|+.+... +.
T Consensus 239 -k~~~t-I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 239 -KRIHS-LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp -EEEEE-EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred -cEeeE-EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccc
Confidence 22221 11110 0111 111 1456888876 677877766556778765521 11
Q ss_pred ---ccCcee-EEEeC-CeEEEEecCCceEEEEEecC
Q 044903 327 ---LKGARH-AAAGG-GRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 327 ---~~~~~~-~~~~~-~~l~v~gg~~~~i~v~d~~~ 357 (387)
...... ....+ ..|||-..+.+.|.+||+..
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred ccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 011122 22334 46888877788999999973
No 154
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.73 E-value=0.25 Score=46.56 Aligned_cols=134 Identities=8% Similarity=-0.122 Sum_probs=71.5
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEc--CCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT--GELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~--~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
+++++.|+.+. .+.+||..+.+ -... ....... .+.+.. ++++++.++....+.+||..+.
T Consensus 210 ~~~l~s~~~d~--------~i~vwd~~~~~----~~~~~~~~h~~~v----~~~~~s-d~~~l~s~~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 210 HQFIITSDRDE--------HIKISHYPQCF----IVDKWLFGHKHFV----SSICCG-KDYLLLSAGGDDKIFAWDWKTG 272 (450)
T ss_dssp CEEEEEEETTS--------CEEEEEESCTT----CEEEECCCCSSCE----EEEEEC-STTEEEEEESSSEEEEEETTTC
T ss_pred CcEEEEEcCCC--------cEEEEECCCCc----eeeeeecCCCCce----EEEEEC-CCCEEEEEeCCCeEEEEECCCC
Confidence 66777776543 68889988776 3322 1111110 122222 7777777777789999999877
Q ss_pred ceeec-ccc-----c-----------------cCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeC--C-CCceEEccccc
Q 044903 274 TWDDM-REG-----M-----------------VRGWRGPVAAMD--EEVLYGIDENSCTLSKYDE--V-MDDWKEVVKSD 325 (387)
Q Consensus 274 ~W~~~-~~~-----~-----------------~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~--~-~~~W~~v~~~~ 325 (387)
+-... ... + ........++.. +..|++....++.|.+||. . ...++.+....
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 273 KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 53221 100 0 000001112221 3344444446789999998 3 34556655444
Q ss_pred cccCceeEEEeCCeEEEEecC
Q 044903 326 LLKGARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 326 ~~~~~~~~~~~~~~l~v~gg~ 346 (387)
.......++...+.+++..+.
T Consensus 353 ~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 353 FPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp CSSCEEEEEEETTEEEEEECC
T ss_pred cCCceEEEEecCCcEEEEEec
Confidence 333334455556777777554
No 155
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.73 E-value=0.0073 Score=55.52 Aligned_cols=147 Identities=12% Similarity=0.176 Sum_probs=80.5
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++++.|+.+. .+.+||..++. |..+..+.... .....+.+ ++.+.+.++.+..+.+||..+
T Consensus 22 ~g~~l~~~~~d~--------~i~iw~~~~~~----~~~~~~~~~h~---~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 22 QRTEFVTTTATN--------QVELYEQDGNG----WKHARTFSDHD---KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp SSSEEECCCSSS--------CBCEEEEETTE----EEECCCBCCCS---SCEEEEEECTTTCCEEEEETTSSEEEC----
T ss_pred CCCEEEEecCCC--------EEEEEEccCCc----eEEEEEEecCC---ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCC
Confidence 455556555433 67888988887 87776554221 11223333 567777777677899999988
Q ss_pred Cc-eeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCc-eEEcccccc-ccCceeEE--EeCCeEEEEecC
Q 044903 273 NT-WDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDD-WKEVVKSDL-LKGARHAA--AGGGRVCAVCEN 346 (387)
Q Consensus 273 ~~-W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~-W~~v~~~~~-~~~~~~~~--~~~~~l~v~gg~ 346 (387)
+. |............-.+++. .++++++.++.++.|.+||.++.. |..+..... .......+ ..++++++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 76 5543321111111112222 245666777778899999998764 544443332 33332222 236788888888
Q ss_pred CceEEEEEec
Q 044903 347 GGGIVVVDVK 356 (387)
Q Consensus 347 ~~~i~v~d~~ 356 (387)
++.+.+||+.
T Consensus 167 d~~i~iwd~~ 176 (377)
T 3dwl_C 167 DRKAYVLSAY 176 (377)
T ss_dssp SSCEEEEEEC
T ss_pred CCEEEEEEEE
Confidence 8899999985
No 156
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.71 E-value=0.075 Score=47.64 Aligned_cols=185 Identities=10% Similarity=-0.014 Sum_probs=96.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCc----eeeCCCCCCCceeeeEEeeCCE-EEEEecCCCCCCCCCCceEEEEe
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRT----WTFGPELVTPRRWCAAGYSRGA-VYVASGIGSQFSSDVAKSVEKWD 220 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~----W~~l~~~~~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~vyd 220 (387)
++.+++.|+.+ ..+.+||..+.. -..+.....+ ....+..-+++ .++.|+.+. .+.+||
T Consensus 22 ~~~~l~~~~~d-------~~v~iw~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~dg--------~i~~wd 85 (342)
T 1yfq_A 22 SKSLLLITSWD-------GSLTVYKFDIQAKNVDLLQSLRYKHP-LLCCNFIDNTDLQIYVGTVQG--------EILKVD 85 (342)
T ss_dssp GGTEEEEEETT-------SEEEEEEEETTTTEEEEEEEEECSSC-EEEEEEEESSSEEEEEEETTS--------CEEEEC
T ss_pred CCCEEEEEcCC-------CeEEEEEeCCCCccccceeeeecCCc-eEEEEECCCCCcEEEEEcCCC--------eEEEEE
Confidence 44555555532 456777776665 2222211111 11112222566 666666533 688999
Q ss_pred C-CCCccccCeEEcCC--CCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc-------eeeccccccCCCCCcE
Q 044903 221 L-MNGEKNSRWEKTGE--LKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT-------WDDMREGMVRGWRGPV 290 (387)
Q Consensus 221 ~-~t~~~~~~W~~~~~--~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~-------W~~~~~~~~~~~~~~~ 290 (387)
. .+.+ -..+.. ..... ...+...+.+++.++....+.+||..+.. .+.+.. +.....-.+
T Consensus 86 ~~~~~~----~~~~~~~~~~~~v-----~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~~v~~ 155 (342)
T 1yfq_A 86 LIGSPS----FQALTNNEANLGI-----CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN-TKVKNKIFT 155 (342)
T ss_dssp SSSSSS----EEECBSCCCCSCE-----EEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-SSSCCCEEE
T ss_pred eccCCc----eEeccccCCCCce-----EEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeE-EeeCCceEE
Confidence 9 8887 655543 22111 22222325555666666788999876400 111111 111111223
Q ss_pred EEEeCCeEEEEeCCCCeEEEEeCCC-Cc--eEEccccccccCceeEEE-e-CCeEEEEecCCceEEEEEecCC
Q 044903 291 AAMDEEVLYGIDENSCTLSKYDEVM-DD--WKEVVKSDLLKGARHAAA-G-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 291 ~~~~~g~ly~~g~~~~~v~~yd~~~-~~--W~~v~~~~~~~~~~~~~~-~-~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++...+. ++.+..++.|.+||..+ .. ...... +......++.. . +++.+++|+.++.+.+||....
T Consensus 156 ~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 156 MDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred EEecCCc-EEEEeCCCeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 4444555 55666788999999987 32 222211 11111122232 2 5788888888889999888743
No 157
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.28 Score=44.11 Aligned_cols=183 Identities=10% Similarity=0.097 Sum_probs=92.6
Q ss_pred CccEEEeCCCCceeeCCCCC---CCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccc-cCeEEcCCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELV---TPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKN-SRWEKTGELKD 238 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~---~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~-~~W~~~~~~~~ 238 (387)
..+.+||..++....+..+. ....-.+.+. -++++++.|+.+. .+.+||....... +.+..+..+..
T Consensus 34 ~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~--------~v~iw~~~~~~~~~~~~~~~~~~~~ 105 (330)
T 2hes_X 34 RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS--------TVSIWAKEESADRTFEMDLLAIIEG 105 (330)
T ss_dssp SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTS--------CEEEEEC-------CCCEEEEEEC-
T ss_pred CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCC--------cEEEEEcccCcCccccceeEEEEcC
Confidence 45778888776544332221 1111111221 2456677776543 5777776432100 00322221110
Q ss_pred CcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC--CceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeC
Q 044903 239 GRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA--NTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDE 313 (387)
Q Consensus 239 ~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~--~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~ 313 (387)
. ......+.+ +|++.+.++.+..+.++|... ..++.+.........-.+++. .++.+++.++.++.|.+||.
T Consensus 106 h---~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 106 H---ENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp ------CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred C---CCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 0 011222333 567767777778899999843 344433211011100112222 25667777778899999999
Q ss_pred CCCceEEccccccccCceeEEEe--C--CeEEEEecCCceEEEEEecC
Q 044903 314 VMDDWKEVVKSDLLKGARHAAAG--G--GRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~~~--~--~~l~v~gg~~~~i~v~d~~~ 357 (387)
.+..|+.+............+.. + +..++.|+.+..+.+||+..
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 88888776655444443322222 2 45666777788888888763
No 158
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.016 Score=59.18 Aligned_cols=149 Identities=8% Similarity=0.054 Sum_probs=86.9
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEEC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~ 270 (387)
+++.++.|+.+. .+.+||..+++ +..+..+.... ....++.+ + +.+.+.|+.+..+.+||.
T Consensus 20 dg~~latg~~dg--------~I~vwd~~~~~----~~~~~~l~~h~---~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSDK--------TIKIFEVEGET----HKLIDTLTGHE---GPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETTT--------EEEEEEEETTE----EEEEEEECCCS---SCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCC--------cEEEEecCCCC----CccceeccCCc---CceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 345555665433 67888887666 66554433211 11333333 3 667777777788999999
Q ss_pred CCCceeeccccccCCCCCcEEEEe-C--CeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEe-----------
Q 044903 271 VANTWDDMREGMVRGWRGPVAAMD-E--EVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG----------- 336 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~-~--g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~----------- 336 (387)
.++.|..+.........-.+++.. + +.+++.++.++.|.+||..+..-...............+..
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 998876655322111112233332 2 66778888889999999977632221111112222222221
Q ss_pred ----CCeEEEEecCCceEEEEEecCC
Q 044903 337 ----GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 337 ----~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++..++.|+.++.|.+||....
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~ 190 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSD 190 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETT
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCC
Confidence 3678888888888999998743
No 159
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.66 E-value=0.28 Score=45.14 Aligned_cols=178 Identities=8% Similarity=0.036 Sum_probs=96.9
Q ss_pred CccEEEeCCCCceeeC--CCCCCCce-eeeEE---eeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCC
Q 044903 164 TRPLIFDPICRTWTFG--PELVTPRR-WCAAG---YSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELK 237 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l--~~~~~~r~-~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~ 237 (387)
..+.+||..+.+-... ...+.... ..... ..++.+++.|+.+. .+.+||....... -..+..-.
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~--------~v~~wd~~~~~~~--~~~~~~h~ 249 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT--------TVRLWDLRITSRA--VRTYHGHE 249 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS--------CEEEEETTTTCCC--CEEECCCS
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC--------eEEEEECCCCCcc--eEEECCcC
Confidence 3567888887765432 11111111 11111 22567888887654 6788888643200 22222111
Q ss_pred CCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeec-cccc---cCCC-CCcEEE-EeCCeEEEEeCCCCeEE
Q 044903 238 DGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDM-REGM---VRGW-RGPVAA-MDEEVLYGIDENSCTLS 309 (387)
Q Consensus 238 ~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~---~~~~-~~~~~~-~~~g~ly~~g~~~~~v~ 309 (387)
.. ..++.+ +|..++.|+.+..+.+||+.++.-... .... .... .-.+++ ..+|++.+.+..++.|.
T Consensus 250 ~~------v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 250 GD------INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp SC------CCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CC------eEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 11 112222 567777777778899999987643221 1100 0000 012333 33677777888889999
Q ss_pred EEeCCCCceEE-cccc-ccccCc--eeEEEeCCeEEEEecCCceEEEEEecC
Q 044903 310 KYDEVMDDWKE-VVKS-DLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 310 ~yd~~~~~W~~-v~~~-~~~~~~--~~~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
+||..+.+-.. +... ..+... ......+|+.++.|+.++.+.+||+..
T Consensus 324 vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 324 VWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred EEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 99987664332 2111 112222 233345788888888899999999884
No 160
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.65 E-value=0.081 Score=46.92 Aligned_cols=147 Identities=7% Similarity=0.048 Sum_probs=79.4
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEEC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~ 270 (387)
+++.++.|+.+. .+.+||..++. .+.+..+... ......+.+ +|.+.+.++.+..+.++|.
T Consensus 20 ~g~~las~s~D~--------~v~iw~~~~~~----~~~~~~l~gH---~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 20 YGKRMATCSSDK--------TIKIFEVEGET----HKLIDTLTGH---EGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp TSSEEEEEETTS--------CEEEEEBCSSC----BCCCEEECCC---SSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred CCCEEEEEeCCC--------EEEEEecCCCC----cEEEEEEccc---cCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 456666776543 67888876544 3222211110 011223333 2667777777789999999
Q ss_pred CCCceeeccccccCCCCCcEEEEeC---CeEEEEeCCCCeEEEEeCCCCc-eEEccccccccCceeEEEe----------
Q 044903 271 VANTWDDMREGMVRGWRGPVAAMDE---EVLYGIDENSCTLSKYDEVMDD-WKEVVKSDLLKGARHAAAG---------- 336 (387)
Q Consensus 271 ~~~~W~~~~~~~~~~~~~~~~~~~~---g~ly~~g~~~~~v~~yd~~~~~-W~~v~~~~~~~~~~~~~~~---------- 336 (387)
.++.|..+.........-.+++... +.+++.++.++.|.+||..+.. +... ...........+.+
T Consensus 85 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI-IIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE-EEECCSSCEEEEEECCCC------
T ss_pred CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee-eeecccCccceEeecCCccccccc
Confidence 9888865542111111111233221 5677777788999999987652 3211 11111111111111
Q ss_pred -----CCeEEEEecCCceEEEEEecC
Q 044903 337 -----GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 337 -----~~~l~v~gg~~~~i~v~d~~~ 357 (387)
++++++.|+.++.+.+||...
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~ 189 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNS 189 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEET
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcC
Confidence 246778877888899998874
No 161
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.65 E-value=0.087 Score=48.85 Aligned_cols=143 Identities=10% Similarity=0.092 Sum_probs=81.9
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++.++.|+.+. .+.+||..+.+ -...-.-... ...++.+ ++...+.++.+..+.+||..+
T Consensus 134 dg~~l~s~~~d~--------~i~iwd~~~~~----~~~~~~~h~~-----~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~ 196 (393)
T 1erj_A 134 DGKFLATGAEDR--------LIRIWDIENRK----IVMILQGHEQ-----DIYSLDYFPSGDKLVSGSGDRTVRIWDLRT 196 (393)
T ss_dssp TSSEEEEEETTS--------CEEEEETTTTE----EEEEECCCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCCEEEEEcCCC--------eEEEEECCCCc----EEEEEccCCC-----CEEEEEEcCCCCEEEEecCCCcEEEEECCC
Confidence 566777776543 68899988776 3322111111 1222222 566666666668899999987
Q ss_pred CceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEcccc-----ccccCce-eE-EEeCCeEEEE
Q 044903 273 NTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKS-----DLLKGAR-HA-AAGGGRVCAV 343 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~-----~~~~~~~-~~-~~~~~~l~v~ 343 (387)
.+....-. .... ..+++.. ++++++.++.++.|.+||..+..-...... ....... ++ ...+++.++.
T Consensus 197 ~~~~~~~~-~~~~--v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 273 (393)
T 1erj_A 197 GQCSLTLS-IEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 273 (393)
T ss_dssp TEEEEEEE-CSSC--EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEE
T ss_pred CeeEEEEE-cCCC--cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEE
Confidence 75432211 1111 1223332 567888888889999999987754332111 1112222 22 2336788888
Q ss_pred ecCCceEEEEEecC
Q 044903 344 CENGGGIVVVDVKA 357 (387)
Q Consensus 344 gg~~~~i~v~d~~~ 357 (387)
|+.++.+.+||+..
T Consensus 274 ~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 274 GSLDRSVKLWNLQN 287 (393)
T ss_dssp EETTSEEEEEEC--
T ss_pred EeCCCEEEEEECCC
Confidence 88889999999874
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.65 E-value=0.093 Score=47.08 Aligned_cols=152 Identities=11% Similarity=-0.029 Sum_probs=74.0
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCC-EEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRG-AVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.+|+.++. ...++++|+.+++....-+.+........+. -++ .+|+.+... ..+.+||+.+
T Consensus 10 ~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--------~~i~~~d~~t 74 (349)
T 1jmx_B 10 GHEYMIVTNY-------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--------GDIYGIDLDT 74 (349)
T ss_dssp TCEEEEEEET-------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--------TEEEEEETTT
T ss_pred CCEEEEEeCC-------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--------CcEEEEeCCC
Confidence 5677777653 2578999999887654222222001112222 233 577776432 2689999988
Q ss_pred CccccCeEEcCCCCCCc--ccccceeEEE-ECC-EEEEEeee-----------CCeEEEEECCCCceeeccccccCCCCC
Q 044903 224 GEKNSRWEKTGELKDGR--FSREAIDAVG-WKG-KLCLVNVK-----------GAEGAVYDVVANTWDDMREGMVRGWRG 288 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~--~~~~~~~~v~-~~g-~lyv~gg~-----------~~~i~~yD~~~~~W~~~~~~~~~~~~~ 288 (387)
.+ -...-..+... ........+. -+| .+|+.+.. ...+.+||+.+++-...-.........
T Consensus 75 ~~----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 150 (349)
T 1jmx_B 75 CK----NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV 150 (349)
T ss_dssp TE----EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC
T ss_pred Cc----EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc
Confidence 77 43222221100 0000011222 245 46665532 268999998774321111001111111
Q ss_pred cEEE-EeCCeEEEEeCCCCeEEEEeCCCCceE
Q 044903 289 PVAA-MDEEVLYGIDENSCTLSKYDEVMDDWK 319 (387)
Q Consensus 289 ~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~ 319 (387)
.+++ ..+|++|+.+ +.+++||+++.+-.
T Consensus 151 ~~~~~s~dg~l~~~~---~~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 151 YLMRAADDGSLYVAG---PDIYKMDVKTGKYT 179 (349)
T ss_dssp CCEEECTTSCEEEES---SSEEEECTTTCCEE
T ss_pred cceeECCCCcEEEcc---CcEEEEeCCCCcee
Confidence 2222 2356677753 34888888776543
No 163
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.65 E-value=0.068 Score=47.52 Aligned_cols=177 Identities=10% Similarity=0.030 Sum_probs=90.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCC----CceeeeEEeeCCEEEEEecCCCCC---CCCCCceEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVT----PRRWCAAGYSRGAVYVASGIGSQF---SSDVAKSVE 217 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~----~r~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~v~ 217 (387)
-++.+|+... ..+++||+.+++++.+..... .+....++.-++++|+........ .......++
T Consensus 63 ~dG~l~v~~~---------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~ 133 (297)
T 3g4e_A 63 QSGGYVATIG---------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALY 133 (297)
T ss_dssp TTSSEEEEET---------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEE
T ss_pred CCCCEEEEEC---------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEE
Confidence 3566666431 468999999998877644321 122222233367888753221100 001223677
Q ss_pred EEeCCCCccccCeEEcC-CCCCCcccccceeEEEE--CC-EEEEEeeeCCeEEEEEC--CCCcee------eccccccCC
Q 044903 218 KWDLMNGEKNSRWEKTG-ELKDGRFSREAIDAVGW--KG-KLCLVNVKGAEGAVYDV--VANTWD------DMREGMVRG 285 (387)
Q Consensus 218 vyd~~t~~~~~~W~~~~-~~~~~~~~~~~~~~v~~--~g-~lyv~gg~~~~i~~yD~--~~~~W~------~~~~~~~~~ 285 (387)
.+|+.. + -..+. .+.. .....+ +| .+|+.......+.+||. .+.... .+... .+
T Consensus 134 ~~d~~g-~----~~~~~~~~~~-------pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~--~~ 199 (297)
T 3g4e_A 134 SLFPDH-H----VKKYFDQVDI-------SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKE--EQ 199 (297)
T ss_dssp EECTTS-C----EEEEEEEESB-------EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGG--GC
T ss_pred EEECCC-C----EEEEeecccc-------ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCC--CC
Confidence 777753 3 33321 1110 112233 45 58888665578889876 444432 22110 01
Q ss_pred CCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEe---CCeEEEEecC
Q 044903 286 WRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG---GGRVCAVCEN 346 (387)
Q Consensus 286 ~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~---~~~l~v~gg~ 346 (387)
. ...+++ .+|+||+.....+.|.+||+++.+.......|... ..+++.. ++.|||....
T Consensus 200 ~-p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~-~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 200 I-PDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDK-TTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp E-EEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSB-EEEEEEESGGGCEEEEEEBC
T ss_pred C-CCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCC-ceEEEEeCCCCCEEEEEcCC
Confidence 1 112333 35789988766678999999976554433333222 2222222 2478887653
No 164
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.63 E-value=0.043 Score=49.15 Aligned_cols=180 Identities=16% Similarity=0.092 Sum_probs=87.1
Q ss_pred CccEEEeCC--CCceeeCCCCCCCceeeeEEe-eCC-EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPI--CRTWTFGPELVTPRRWCAAGY-SRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~--t~~W~~l~~~~~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
..+.+|+.. +.+++.+..++........+. -++ .+|+.+..+ ..+.+||...+. . ...+......
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~~~-~--~~~~~~~~~~ 128 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNA--------GNVSVTRLEDGL-P--VGVVDVVEGL 128 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTT--------TEEEEEEEETTE-E--EEEEEEECCC
T ss_pred CeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEecCC--------CeEEEEECCCCc-c--ccccccccCC
Confidence 456676665 777776543332211112222 233 466665322 257888874221 0 2222211111
Q ss_pred cccccceeEEEECC-EEEEEeeeCCeEEEEECCC-Cceeecc--c-cccCCCCCcEEEE-eCC-eEEEEeCCCCeEEEEe
Q 044903 240 RFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVA-NTWDDMR--E-GMVRGWRGPVAAM-DEE-VLYGIDENSCTLSKYD 312 (387)
Q Consensus 240 ~~~~~~~~~v~~~g-~lyv~gg~~~~i~~yD~~~-~~W~~~~--~-~~~~~~~~~~~~~-~~g-~ly~~g~~~~~v~~yd 312 (387)
... ...+..-+| .+|+.+.....+.+||+.+ ++...+. . ....+.....++. .++ .+|+.+..++.+.+||
T Consensus 129 ~~~--~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 129 DGC--HSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp TTB--CCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCc--eEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 110 011222244 5666653456899999987 6665332 1 0111111112222 234 5888876788999999
Q ss_pred CC--CCceEEccc---cccc-c---CceeEE-EeCC-eEEEEecCCceEEEEEec
Q 044903 313 EV--MDDWKEVVK---SDLL-K---GARHAA-AGGG-RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 313 ~~--~~~W~~v~~---~~~~-~---~~~~~~-~~~~-~l~v~gg~~~~i~v~d~~ 356 (387)
.+ +.+++.+.. .+.. . ....++ .-+| .||+.+..++.+.+||+.
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 84 455543322 2221 1 111222 2344 566666567889999987
No 165
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.59 E-value=0.28 Score=44.07 Aligned_cols=184 Identities=10% Similarity=0.011 Sum_probs=96.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEE---eeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAG---YSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~---~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
++..++.|+.+ ..+.+||..+.+...+.....+ -.+.+ .-++++++.|+.+. .+.+||..
T Consensus 97 ~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg--------~i~vwd~~ 159 (368)
T 3mmy_A 97 DGSKVFTASCD-------KTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWDK--------TLKFWDTR 159 (368)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETTS--------EEEEECSS
T ss_pred CCCEEEEEcCC-------CcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCCC--------cEEEEECC
Confidence 55566665532 4678899988876553322111 11222 23566777776543 68899988
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC--ceeeccccccCCCCCcEEEE-eCC---
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGWRGPVAAM-DEE--- 296 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~~~~~~~~-~~g--- 296 (387)
+.+. ...-..+.. .......... .+++.....+.+||.... .+..+....... ....+. .+.
T Consensus 160 ~~~~----~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 227 (368)
T 3mmy_A 160 SSNP----MMVLQLPER-----CYCADVIYPM-AVVATAERGLIVYQLENQPSEFRRIESPLKHQ--HRCVAIFKDKQNK 227 (368)
T ss_dssp CSSC----SEEEECSSC-----EEEEEEETTE-EEEEEGGGCEEEEECSSSCEEEEECCCSCSSC--EEEEEEEECTTSC
T ss_pred CCcE----EEEEecCCC-----ceEEEecCCe-eEEEeCCCcEEEEEeccccchhhhccccccCC--CceEEEcccCCCC
Confidence 7762 111111111 1223333444 344444568889998765 344433211111 112221 111
Q ss_pred -eEEEEeCCCCeEEEEeCCCCce-EEcccccccc------------Cce-eE-EEeCCeEEEEecCCceEEEEEecCC
Q 044903 297 -VLYGIDENSCTLSKYDEVMDDW-KEVVKSDLLK------------GAR-HA-AAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 -~ly~~g~~~~~v~~yd~~~~~W-~~v~~~~~~~------------~~~-~~-~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..++.++.++.+.+||.....- ..+....... ... ++ ...++++++.|+.++.+.+||+.+.
T Consensus 228 ~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 228 PTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR 305 (368)
T ss_dssp EEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT
T ss_pred CCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC
Confidence 2366667789999999976521 1111111110 012 22 2336778888888899999999854
No 166
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.58 E-value=0.062 Score=48.90 Aligned_cols=149 Identities=9% Similarity=0.123 Sum_probs=82.4
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++++.||.+. .+.+||..++. |.....+.... ......+.+ +|++.+.|+.+..+.++|..+
T Consensus 27 ~g~~las~~~D~--------~i~iw~~~~~~----~~~~~~~~~~h--~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~ 92 (345)
T 3fm0_A 27 AGTLLASCGGDR--------RIRIWGTEGDS----WICKSVLSEGH--QRTVRKVAWSPCGNYLASASFDATTCIWKKNQ 92 (345)
T ss_dssp TSSCEEEEETTS--------CEEEEEEETTE----EEEEEEECSSC--SSCEEEEEECTTSSEEEEEETTSCEEEEEECC
T ss_pred CCCEEEEEcCCC--------eEEEEEcCCCc----ceeeeeecccc--CCcEEEEEECCCCCEEEEEECCCcEEEEEccC
Confidence 456666666543 67888888877 75332111110 011223333 577777777777888999887
Q ss_pred CceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCC-ceEEccccccccCceeEE--EeCCeEEEEecCCc
Q 044903 273 NTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMD-DWKEVVKSDLLKGARHAA--AGGGRVCAVCENGG 348 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~-~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~ 348 (387)
+.++.+.........-.+++. .++++++.++.++.|.+||..+. .+..+............+ ..++++++.|+.++
T Consensus 93 ~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 93 DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 766543321111101112222 25677777778899999998764 344333332222222222 23567777777777
Q ss_pred eEEEEEecC
Q 044903 349 GIVVVDVKA 357 (387)
Q Consensus 349 ~i~v~d~~~ 357 (387)
.+.+||...
T Consensus 173 ~i~~w~~~~ 181 (345)
T 3fm0_A 173 TVKLYREEE 181 (345)
T ss_dssp CEEEEEEET
T ss_pred cEEEEEecC
Confidence 777777764
No 167
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.57 E-value=0.15 Score=45.23 Aligned_cols=186 Identities=12% Similarity=0.066 Sum_probs=100.4
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+|+.... ...+++||+.+++.+.... + ......+..-++++|+..+ ..+.+||+.+++
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~-~-~~~~~i~~~~dG~l~v~~~----------~~l~~~d~~~g~ 84 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVTM-D-APVSSVALRQSGGYVATIG----------TKFCALNWKEQS 84 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEEC-S-SCEEEEEEBTTSSEEEEET----------TEEEEEETTTTE
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEeC-C-CceEEEEECCCCCEEEEEC----------CeEEEEECCCCc
Confidence 4678887642 2578999999886644321 1 1112222223567776531 267899999988
Q ss_pred cccCeEEcCCCCCCc-ccccceeEEEECCEEEEEeeeC-----------CeEEEEECCCCceeeccccccCCCCCcEEEE
Q 044903 226 KNSRWEKTGELKDGR-FSREAIDAVGWKGKLCLVNVKG-----------AEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~-~~~~~~~~v~~~g~lyv~gg~~-----------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
++.+....... ..+-...++.-+|++|+-.... ..++.+|+.. +-..+...... ...++.
T Consensus 85 ----~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~ 156 (297)
T 3g4e_A 85 ----AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDW 156 (297)
T ss_dssp ----EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEE
T ss_pred ----EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEE
Confidence 77665432211 1111111222368888754211 3577777653 33332221111 112333
Q ss_pred e--CCeEEEEeCCCCeEEEEeC--CCCceEE---cccccc-ccCceeEE-EeCCeEEEEecCCceEEEEEecCC
Q 044903 294 D--EEVLYGIDENSCTLSKYDE--VMDDWKE---VVKSDL-LKGARHAA-AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~--~g~ly~~g~~~~~v~~yd~--~~~~W~~---v~~~~~-~~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
. +..||+.+...+.|++||. ++..... +...+. ......++ .-+|.|||....++.|.+||+.++
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 2 3469998876788999976 4444322 111111 11123333 347899998777788999998744
No 168
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.045 Score=50.64 Aligned_cols=105 Identities=6% Similarity=-0.077 Sum_probs=60.0
Q ss_pred CEEEEEeeeCCeEEEEECCCCceeecccccc--C--CCCCcEEEEe--CCeEEEEeCCCC---eEEEEeCCCCceEEccc
Q 044903 253 GKLCLVNVKGAEGAVYDVVANTWDDMREGMV--R--GWRGPVAAMD--EEVLYGIDENSC---TLSKYDEVMDDWKEVVK 323 (387)
Q Consensus 253 g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~--~--~~~~~~~~~~--~g~ly~~g~~~~---~v~~yd~~~~~W~~v~~ 323 (387)
+.+++.++....+.+||..+.+-...-.... . ...-.+++.. ++.+++.+..++ .|.+||..+..- .+..
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~~~~ 256 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-PLQT 256 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-CSBC
T ss_pred CcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-CcEE
Confidence 4677776767789999998765432211110 0 1111223332 235777776676 899999987421 1112
Q ss_pred cc-cccCce-eEEE-e-CCeEEEEecCCceEEEEEecCC
Q 044903 324 SD-LLKGAR-HAAA-G-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 324 ~~-~~~~~~-~~~~-~-~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.. ...... .+.. . ++++++.++.++.+.+||+.+.
T Consensus 257 ~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 257 LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 22 122222 2222 2 6788888888888999998754
No 169
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.54 E-value=0.45 Score=47.28 Aligned_cols=184 Identities=12% Similarity=-0.053 Sum_probs=108.7
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCce-eeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++.||+.-. ....++++++.....+.+..-..... ..+....+++||+.-.. ...+++.++...
T Consensus 360 ~~~ly~sD~-------~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~--------~~~I~v~~~~G~ 424 (619)
T 3s94_A 360 EGYIYWTDD-------EVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTG--------TDRIEVTRLNGT 424 (619)
T ss_dssp TTEEEEEET-------TTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT--------TTEEEEEETTSC
T ss_pred CCeEEEEeC-------CCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCC--------CCcEEEEeCCCC
Confidence 578888743 23567888887766555432221111 12222247899998432 247888888766
Q ss_pred ccccCeEEcC--CCCCCcccccceeEEEE--CCEEEEEee-eCCeEEEEECCCCceeeccccccCCCCCc-EEEEe--CC
Q 044903 225 EKNSRWEKTG--ELKDGRFSREAIDAVGW--KGKLCLVNV-KGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAMD--EE 296 (387)
Q Consensus 225 ~~~~~W~~~~--~~~~~~~~~~~~~~v~~--~g~lyv~gg-~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~~--~g 296 (387)
. -+.+. .+..| ...++. +|.||+..- ....|+..+++-..=+.+.. .....+ .+++. ++
T Consensus 425 ~----~~~l~~~~l~~P------~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~---~~l~~P~GlalD~~~~ 491 (619)
T 3s94_A 425 M----RKILISEDLEEP------RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN---TSLGWPNGLALDYDEG 491 (619)
T ss_dssp S----CEEEECTTCCSE------EEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTT
T ss_pred e----EEEEEECCCCCe------eeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe---CCCCCCeeeEEcccCC
Confidence 4 33332 22222 222332 589999852 23678888875332222211 111122 23333 68
Q ss_pred eEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 297 VLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+||+.+...+.|.++|++...=+.+.. .....+++++..++.||+.-.....|+..|..++
T Consensus 492 ~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 492 KIYWGDAKTDKIEVMNTDGTGRRVLVE-DKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp EEEEEETTTTEEEEEESSSCCCEEEEE-CCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC
T ss_pred EEEEEECCCCEEEEEecCCCceEEEec-cCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC
Confidence 999999878899999987654333322 2234467788899999999666788999988854
No 170
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.54 E-value=0.24 Score=50.57 Aligned_cols=212 Identities=11% Similarity=0.077 Sum_probs=115.9
Q ss_pred EEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEe-CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeC
Q 044903 101 HLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFG 179 (387)
Q Consensus 101 ~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l 179 (387)
-++.||+.++++..+..... + . ..-.+.+.. ++.||+... .-+++||+.+++|+..
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~-~-~------------~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKN-E-L------------LDVRVFYEDKNKKIWIGTH---------AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EEEEECSSSCEEEECCSTTT-C-C------------CCEEEEEECTTSEEEEEET---------TEEEEEESSSSSCCEE
T ss_pred CEEEEcCCCCcEEEeccCCC-C-C------------CeEEEEEECCCCCEEEEEC---------CceEEEeCCCCeEEec
Confidence 36677887777766643210 0 0 001223332 466666432 3578999999988765
Q ss_pred CCCC-----CCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--C
Q 044903 180 PELV-----TPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K 252 (387)
Q Consensus 180 ~~~~-----~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~ 252 (387)
.... ..........-++.|++... +. -+..||+.+++ +...... .. .......++.. +
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~~--------Gl~~~~~~~~~----~~~~~~~-~~-l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTF-GG--------GVGIYTPDMQL----VRKFNQY-EG-FCSNTINQIYRSSK 549 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEES-SS--------CEEEECTTCCE----EEEECTT-TT-CSCSCEEEEEECTT
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEc-CC--------CEEEEeCCCCe----EEEccCC-CC-CCCCeeEEEEECCC
Confidence 3222 11222222223567877532 11 36779998888 8776531 11 11111223333 5
Q ss_pred CEEEEEeeeCCeE-EEEECCCCceeecc--ccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEcccccccc
Q 044903 253 GKLCLVNVKGAEG-AVYDVVANTWDDMR--EGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 253 g~lyv~gg~~~~i-~~yD~~~~~W~~~~--~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~ 328 (387)
|.|++-.. ..+ ..||+++++++... .+++... -.+++. .+|.||+-+ ...+.+||+++.+++.........
T Consensus 550 g~lWi~T~--~Glv~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~~~~dGl~ 624 (781)
T 3v9f_A 550 GQMWLATG--EGLVCFPSARNFDYQVFQRKEGLPNTH-IRAISEDKNGNIWAST--NTGISCYITSKKCFYTYDHSNNIP 624 (781)
T ss_dssp SCEEEEET--TEEEEESCTTTCCCEEECGGGTCSCCC-CCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEECGGGTCC
T ss_pred CCEEEEEC--CCceEEECCCCCcEEEccccCCCCCce-EEEEEECCCCCEEEEc--CCceEEEECCCCceEEecccCCcc
Confidence 77776543 356 88999998887654 2233221 223333 257788774 456999999999888765332221
Q ss_pred -Cc---eeEE-EeCCeEEEEecCCceEEEEEecC
Q 044903 329 -GA---RHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 329 -~~---~~~~-~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.. .+++ .-+|.|++-+ ..++..+|+..
T Consensus 625 ~~~f~~~~~~~~~~G~l~~g~--~~Gl~~f~p~~ 656 (781)
T 3v9f_A 625 QGSFISGCVTKDHNGLIYFGS--INGLCFFNPDI 656 (781)
T ss_dssp SSCEEEEEEEECTTSCEEEEE--TTEEEEECSCC
T ss_pred ccccccCceEECCCCEEEEEC--CCceEEEChhh
Confidence 11 1233 3367777753 34577788763
No 171
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.53 E-value=0.087 Score=47.10 Aligned_cols=185 Identities=12% Similarity=0.031 Sum_probs=91.4
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.|+.+ ..+.+++.......................-.+..++.|+.+. .+.+||.....
T Consensus 97 dg~~l~s~~~d-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~--------~~~~~d~~~~~ 161 (340)
T 4aow_A 97 DGQFALSGSWD-------GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDK--------TIKLWNTLGVC 161 (340)
T ss_dssp TSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSCE
T ss_pred CCCEEEEEccc-------ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCC--------eEEEEEeCCCc
Confidence 55666666532 3456677766654443222222222222223445555655433 45677766543
Q ss_pred cccCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEE
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYG 300 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~ 300 (387)
-......... .....+.+ + +.+++.++....+.+||..+.+-...-.... + .-.+++. .++++++
T Consensus 162 ----~~~~~~~~~~----~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~-~-~v~~~~~s~~~~~l~ 231 (340)
T 4aow_A 162 ----KYTVQDESHS----EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT-G-YLNTVTVSPDGSLCA 231 (340)
T ss_dssp ----EEEECSSSCS----SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS-S-CEEEEEECTTSSEEE
T ss_pred ----eEEEEecccc----CcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC-C-cEEEEEECCCCCEEE
Confidence 2111111110 11112222 2 3455556666788999998765433221111 1 1112222 2567777
Q ss_pred EeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecC
Q 044903 301 IDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.++.++.|.+||..+.+ .+...........+....+..++.++.++.+.+||...
T Consensus 232 s~s~Dg~i~iwd~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~ 286 (340)
T 4aow_A 232 SGGKDGQAMLWDLNEGK--HLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEG 286 (340)
T ss_dssp EEETTCEEEEEETTTTE--EEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EEeCCCeEEEEEeccCc--eeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCC
Confidence 88888999999997653 22222222222223333344455556677888888774
No 172
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.11 Score=46.93 Aligned_cols=142 Identities=12% Similarity=0.091 Sum_probs=75.0
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCC-ccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNG-EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~-~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~ 271 (387)
+++.++.|+.+. .+.+||..+. +. -..+..... ....+.+ ++.+++.++....+.+||..
T Consensus 186 ~~~~l~~~~~dg--------~i~i~d~~~~~~~---~~~~~~~~~------~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 186 KGKYIIAGHKDG--------KISKYDVSNNYEY---VDSIDLHEK------SISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp GGCEEEEEETTS--------EEEEEETTTTTEE---EEEEECCSS------CEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEcCCC--------EEEEEECCCCcEe---EEEEecCCC------ceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 455566665433 6889999873 30 122211111 1222333 56666676666789999998
Q ss_pred CCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCC--------------eEEEEeCCCCceEEccccccccCceeEE--
Q 044903 272 ANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSC--------------TLSKYDEVMDDWKEVVKSDLLKGARHAA-- 334 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~--------------~v~~yd~~~~~W~~v~~~~~~~~~~~~~-- 334 (387)
+.+-...-. .... ...++ ..+++..++++.++ .+.+||..+.+= +............+
T Consensus 249 ~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~v~~~~~ 323 (369)
T 3zwl_B 249 TLQVLKKYE-TDCP--LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE--IGRVQGHFGPLNTVAI 323 (369)
T ss_dssp TCCEEEEEE-CSSC--EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE--EEEEECCSSCEEEEEE
T ss_pred CCceeeeec-CCCC--ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc--hhheecccCcEEEEEE
Confidence 764432211 0100 11111 22334444443333 688888876532 22222223333222
Q ss_pred EeCCeEEEEecCCceEEEEEecCC
Q 044903 335 AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 335 ~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..++++++.++.++.+.+||+...
T Consensus 324 s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 324 SPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEEECHH
T ss_pred CCCCCEEEEEcCCCeEEEEECccc
Confidence 337888888888899999999843
No 173
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.49 E-value=0.13 Score=46.72 Aligned_cols=181 Identities=13% Similarity=0.104 Sum_probs=88.4
Q ss_pred cEEEeCCCCceeeCCCCCCCceeeeEEeeCC-EEEEEecCCCCCCCCCCceEEEE--eCCCCccccCeEEcCCCCCCccc
Q 044903 166 PLIFDPICRTWTFGPELVTPRRWCAAGYSRG-AVYVASGIGSQFSSDVAKSVEKW--DLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 166 ~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~vy--d~~t~~~~~~W~~~~~~~~~~~~ 242 (387)
++.+|+.+.+.+.+...........+..-++ .||+.+..+. ....+.+| |..+++ .+.+...+.....
T Consensus 31 ~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~-----~~~~v~~~~~~~~~g~----~~~~~~~~~~~~~ 101 (361)
T 3scy_A 31 TFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK-----DQAAVSAFAFDKEKGT----LHLLNTQKTMGAD 101 (361)
T ss_dssp EEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS-----TTCEEEEEEEETTTTE----EEEEEEEECSSSC
T ss_pred EEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC-----CCCcEEEEEEeCCCCc----EEEeeEeccCCCC
Confidence 4666888888877644311111111222234 5777665321 12245555 454466 6655533321111
Q ss_pred ccceeEEEECCE-EEEEeeeCCeEEEEECCCC-ceeeccccc---cCC-------CCC-cEEEE-eCC-eEEEEeCCCCe
Q 044903 243 REAIDAVGWKGK-LCLVNVKGAEGAVYDVVAN-TWDDMREGM---VRG-------WRG-PVAAM-DEE-VLYGIDENSCT 307 (387)
Q Consensus 243 ~~~~~~v~~~g~-lyv~gg~~~~i~~yD~~~~-~W~~~~~~~---~~~-------~~~-~~~~~-~~g-~ly~~g~~~~~ 307 (387)
.+..+. +|+ +|+.+.....+.+||..++ .-..+.... ..+ ... +.+++ .+| .||+.+...+.
T Consensus 102 --p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 178 (361)
T 3scy_A 102 --PCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQ 178 (361)
T ss_dssp --EEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTE
T ss_pred --cEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCE
Confidence 122233 665 6655444478899998643 222221000 000 001 22333 244 48887766778
Q ss_pred EEEEeCCCCc-------eEEc-----cccccccCc-eeEEEeCCe-EEEEecCCceEEEEEecCC
Q 044903 308 LSKYDEVMDD-------WKEV-----VKSDLLKGA-RHAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 308 v~~yd~~~~~-------W~~v-----~~~~~~~~~-~~~~~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
+.+|+.+... .... ...+..... ..++.-+|+ +|+.+..++.+.+||..++
T Consensus 179 v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g 243 (361)
T 3scy_A 179 IHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG 243 (361)
T ss_dssp EEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETT
T ss_pred EEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC
Confidence 9999776543 2211 111122222 223344564 7777656788999998743
No 174
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=96.49 E-value=0.19 Score=44.82 Aligned_cols=144 Identities=9% Similarity=-0.007 Sum_probs=82.5
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeC--CeEEEEECC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKG--AEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~--~~i~~yD~~ 271 (387)
+++||+..... ..+.+||+.... ......+.. .+..+. -+|++|+..... ..+..||+.
T Consensus 42 ~g~lyv~d~~~--------~~I~~~d~~g~~-----~~~~~~~~~-----p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 42 DGTIFVTNHEV--------GEIVSITPDGNQ-----QIHATVEGK-----VSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp TSCEEEEETTT--------TEEEEECTTCCE-----EEEEECSSE-----EEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCCEEEEeCCC--------CeEEEECCCCce-----EEEEeCCCC-----ceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 57899885322 367888887653 222222211 122222 368899886443 358889988
Q ss_pred CCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCC---ceEEccc------cccccCceeEEEeCCeEE
Q 044903 272 ANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMD---DWKEVVK------SDLLKGARHAAAGGGRVC 341 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~---~W~~v~~------~~~~~~~~~~~~~~~~l~ 341 (387)
+++.+.+... +........+ ..++.+|+.+...+.|+++|+.+. .|..-.. .........+..-++.||
T Consensus 104 ~g~~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~ly 182 (306)
T 2p4o_A 104 DGTVETLLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLY 182 (306)
T ss_dssp TSCEEEEEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEE
T ss_pred CCeEEEEEeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEE
Confidence 8877655431 1111111222 345678888766789999999764 2221111 011122334544456899
Q ss_pred EEecCCceEEEEEecC
Q 044903 342 AVCENGGGIVVVDVKA 357 (387)
Q Consensus 342 v~gg~~~~i~v~d~~~ 357 (387)
+.....+.|++||+..
T Consensus 183 v~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 183 VSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEETTTTEEEEEEBCT
T ss_pred EEeCCCCEEEEEEeCC
Confidence 9877778999999874
No 175
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.43 E-value=0.25 Score=42.63 Aligned_cols=219 Identities=9% Similarity=-0.048 Sum_probs=105.0
Q ss_pred CCeEEEEEeCCCCCcccCCCCCCCCCccccccCCCccccccceeEEEeCCEEEEEcCccCCCCCCCCccEEEeCCC-Cce
Q 044903 98 TPIHLFTFDPVSSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVSLSGKLILLAATTHNFNPALTRPLIFDPIC-RTW 176 (387)
Q Consensus 98 ~~~~~~~~d~~~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t-~~W 176 (387)
....++++|..+++...+..... ........-++..+++++ . ..++++|..+ .+.
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~----------------~v~~~~~spdg~~l~~~~--~------~~i~~~d~~~~~~~ 75 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE----------------LFEAPNWSPDGKYLLLNS--E------GLLYRLSLAGDPSP 75 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS----------------CCEEEEECTTSSEEEEEE--T------TEEEEEESSSCCSC
T ss_pred cceeEEEEeCCCCceeeeccCCc----------------ceEeeEECCCCCEEEEEc--C------CeEEEEeCCCCCCc
Confidence 44568888988766544322111 001112223556555543 1 4689999998 877
Q ss_pred eeCCCCCCCce-eeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE-ECCE
Q 044903 177 TFGPELVTPRR-WCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKGK 254 (387)
Q Consensus 177 ~~l~~~~~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~ 254 (387)
..+........ ......-+++.+++++... .....++.+|..+.. -..+..... ....+. -+|+
T Consensus 76 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~~~~~~~------~~~~~~spdg~ 141 (297)
T 2ojh_A 76 EKVDTGFATICNNDHGISPDGALYAISDKVE----FGKSAIYLLPSTGGT----PRLMTKNLP------SYWHGWSPDGK 141 (297)
T ss_dssp EECCCTTCCCBCSCCEECTTSSEEEEEECTT----TSSCEEEEEETTCCC----CEECCSSSS------EEEEEECTTSS
T ss_pred eEeccccccccccceEECCCCCEEEEEEeCC----CCcceEEEEECCCCc----eEEeecCCC------ccceEECCCCC
Confidence 77654332111 1122222455555544321 123477888887776 555543221 011122 2454
Q ss_pred -EEEEeeeCC--eEEEEECCCCceeeccccccCCCCCcEEEE-eCCe-EEEEeCCCC--eEEEEeCCCCceEEccccccc
Q 044903 255 -LCLVNVKGA--EGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV-LYGIDENSC--TLSKYDEVMDDWKEVVKSDLL 327 (387)
Q Consensus 255 -lyv~gg~~~--~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~-ly~~g~~~~--~v~~yd~~~~~W~~v~~~~~~ 327 (387)
|++.+.... .++.+|..+.....+.... .. ...++. .+++ |++.+..++ .++.++..+.....+......
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~--~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 218 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDSGVETRLTHGE-GR--NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG 218 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEECCCSS-SC--EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE
T ss_pred EEEEEECCCCceEEEEEECCCCcceEcccCC-Cc--cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc
Confidence 554544443 4555567666665544211 11 112222 2444 555543344 466667666665554432110
Q ss_pred cCceeEEEeCCeEEEEecCC-----------ceEEEEEecCC
Q 044903 328 KGARHAAAGGGRVCAVCENG-----------GGIVVVDVKAA 358 (387)
Q Consensus 328 ~~~~~~~~~~~~l~v~gg~~-----------~~i~v~d~~~~ 358 (387)
........+|+.+++++.. ..++++|..+.
T Consensus 219 -~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 219 -DWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp -EEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred -cCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 0111223355554444321 45888888754
No 176
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.42 E-value=0.71 Score=47.04 Aligned_cols=185 Identities=10% Similarity=0.064 Sum_probs=103.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCC--CCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL--VTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~--~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.||+ |.. ..-+++||+.+++++..... +..........-++.||+... .-+..||+.+
T Consensus 417 ~g~lWi-gt~-------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~ 478 (781)
T 3v9f_A 417 EGNLWF-GTY-------LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH----------AGVFVIDLAS 478 (781)
T ss_dssp TSCEEE-EET-------TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET----------TEEEEEESSS
T ss_pred CCCEEE-Eec-------cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC----------CceEEEeCCC
Confidence 566776 321 13578999999999887532 222212111222567887532 2478899999
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc--cccCCCCCcEEEE-eCCeE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE--GMVRGWRGPVAAM-DEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~--~~~~~~~~~~~~~-~~g~l 298 (387)
++ |.................+... +|.|++- ..+..+..||+.+++++.... .++.. .-.+++. .+|.|
T Consensus 479 ~~----~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~l 552 (781)
T 3v9f_A 479 KK----VIHHYDTSNSQLLENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKFNQYEGFCSN-TINQIYRSSKGQM 552 (781)
T ss_dssp SS----CCEEECTTTSSCSCSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEECTTTTCSCS-CEEEEEECTTSCE
T ss_pred Ce----EEecccCcccccccceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEccCCCCCCCC-eeEEEEECCCCCE
Confidence 88 7765432211010011222333 4677654 333468899999998887643 12211 1112222 25678
Q ss_pred EEEeCCCCeE-EEEeCCCCceEEccccccccC--ceeEEE-eCCeEEEEecCCceEEEEEecCC
Q 044903 299 YGIDENSCTL-SKYDEVMDDWKEVVKSDLLKG--ARHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 299 y~~g~~~~~v-~~yd~~~~~W~~v~~~~~~~~--~~~~~~-~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
|+-.. +.+ .+||+++++++.......... -.+++. -+|.|++.+ ..++..+|+.+.
T Consensus 553 Wi~T~--~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~ 612 (781)
T 3v9f_A 553 WLATG--EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSKK 612 (781)
T ss_dssp EEEET--TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTTT
T ss_pred EEEEC--CCceEEECCCCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCCC
Confidence 87653 456 999999998887653221111 123333 367888875 345777887754
No 177
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.42 E-value=0.047 Score=51.43 Aligned_cols=146 Identities=7% Similarity=-0.032 Sum_probs=82.3
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~ 271 (387)
++.+.+.|+.+. .|.+||..+.. -..+-.+... .....++.+ ++.+.+.++.+..+.++|.+
T Consensus 131 ~~~~lasGs~dg--------~i~lWd~~~~~----~~~~~~~~gH---~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG--------DIMLWNFGIKD----KPTFIKGIGA---GGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS--------CEEEECSSCCS----CCEEECCCSS---SCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCC----ceeEEEccCC---CCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 345666666543 67888887765 3222211100 011223332 45666666666789999998
Q ss_pred CCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEe---CCeEEEEecCC
Q 044903 272 ANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG---GGRVCAVCENG 347 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~---~~~l~v~gg~~ 347 (387)
++.-..+...-.......+++ ..++++++.++.++.|.+||.+.+. +............+.+ +..+++.|+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 876654432111111112222 3467788888888999999997653 2222222333333332 34577787788
Q ss_pred ceEEEEEecCC
Q 044903 348 GGIVVVDVKAA 358 (387)
Q Consensus 348 ~~i~v~d~~~~ 358 (387)
+.+.+||+...
T Consensus 273 ~~v~iwd~~~~ 283 (435)
T 4e54_B 273 QTVKIWDLRQV 283 (435)
T ss_dssp SBCCEEETTTC
T ss_pred ceeeEEecccc
Confidence 88999998754
No 178
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.41 E-value=0.21 Score=45.65 Aligned_cols=143 Identities=9% Similarity=0.010 Sum_probs=83.4
Q ss_pred EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCC
Q 044903 197 AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 197 ~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
++++.|+.+. .+.+||..+.+ ........... ....++.+ ++.+.+.++.+..+.++|...+
T Consensus 87 ~~l~s~~~dg--------~i~iwd~~~~~----~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG--------DIILWDYDVQN----KTSFIQGMGPG---DAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS--------CEEEEETTSTT----CEEEECCCSTT---CBEEEEEEETTEEEEEEEEETTTEEEEEETTSC
T ss_pred CEEEEEcCCC--------eEEEEeCCCcc----cceeeecCCcC---CceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC
Confidence 5666666543 68899998887 55443221110 11223333 3466666766688999999876
Q ss_pred ceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCe-EEEEecCCce
Q 044903 274 TWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGR-VCAVCENGGG 349 (387)
Q Consensus 274 ~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~-l~v~gg~~~~ 349 (387)
....+.........-.+++ ..+++.++.++.++.|.+||.....-..+. ........+ .-+++ +++.|+.++.
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK---LHKAKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEE---CSSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEec---cCCCcEEEEEECCCCCCEEEEEeCCCE
Confidence 6655543111111111222 235667777778899999999654333222 222222222 23455 8888888899
Q ss_pred EEEEEecC
Q 044903 350 IVVVDVKA 357 (387)
Q Consensus 350 i~v~d~~~ 357 (387)
+.+||+.+
T Consensus 229 i~iwd~~~ 236 (383)
T 3ei3_B 229 VKLWDLRN 236 (383)
T ss_dssp EEEEEGGG
T ss_pred EEEEeCCC
Confidence 99999986
No 179
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.41 E-value=0.37 Score=49.32 Aligned_cols=169 Identities=12% Similarity=0.023 Sum_probs=90.6
Q ss_pred ccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCCC----ccccCeEEc-C-CC
Q 044903 165 RPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG----EKNSRWEKT-G-EL 236 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~----~~~~~W~~~-~-~~ 236 (387)
.+..++.....+..+.+-. ....+.+. .+++||++-... ..|..+++... . ...+ . .+
T Consensus 405 ~Ir~i~l~~~~~~~l~~~~--~~~~gl~~d~~~~~lY~sD~~~--------~~I~~~~l~g~~~~~~----~~~vi~~~l 470 (791)
T 3m0c_C 405 EVRKMTLDRSEYTSLIPNL--RNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVSS----YDTVISRDI 470 (791)
T ss_dssp SEEEECTTSCCCEEEECSC--SSEEEEEEETTTTEEEEEETTT--------TEEEEEEC------------CEEEECSSC
T ss_pred ceeEeeccCCcceeeecCC--CceEEEeecccCCeeEEeeccc--------eeEEEEeccCCCCCcc----eeEEEecCC
Confidence 4556666666655543211 11122222 367899885432 35666666542 2 2222 2 22
Q ss_pred CCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEE--eCCeEEEEeCC-CCeEEEE
Q 044903 237 KDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM--DEEVLYGIDEN-SCTLSKY 311 (387)
Q Consensus 237 ~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~--~~g~ly~~g~~-~~~v~~y 311 (387)
..+. ..++- .++.||+.......|.++|+....-+.+.. .....+ .+++ .++.||+.+.. ...|.+.
T Consensus 471 ~~P~-----GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~ 542 (791)
T 3m0c_C 471 QAPD-----GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 542 (791)
T ss_dssp SCCC-----EEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred CCcc-----eeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe---CCCCCcceEEEecCCCCEEEecCCCCCeEEEE
Confidence 2111 11222 357999997666889999998665444421 111122 3444 35799999843 3789999
Q ss_pred eCCCCceEEccccccccCceeEEE--eCCeEEEEecCCceEEEEEec
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~--~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+++...=+.+... .+..+.+++. .+++||+.-.....|.++|+.
T Consensus 543 ~~dG~~~~~lv~~-~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d 588 (791)
T 3m0c_C 543 GLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 588 (791)
T ss_dssp ETTSCCEEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ecCCCceEEEEeC-CCCCceEEEEecCCCeEEEEeCCCCcEEEEecC
Confidence 9986644443321 1223344443 367888875555667777765
No 180
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.23 Score=46.83 Aligned_cols=66 Identities=6% Similarity=-0.122 Sum_probs=41.6
Q ss_pred CEEEEEeeeCCeEEEEECCCCceeec-cccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE
Q 044903 253 GKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE 320 (387)
Q Consensus 253 g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~ 320 (387)
+++++.++.+..+.+||+.+..-... ..+.. + .-.+++..++++++.++.++.|.+||..+.+-..
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~-~-~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~ 276 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLFGHK-H-FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLS 276 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECCCCS-S-CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEE
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeecCCC-C-ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEee
Confidence 77777777778899999876643321 11111 1 0122333367777777788999999998875433
No 181
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.37 E-value=0.22 Score=46.50 Aligned_cols=173 Identities=12% Similarity=0.015 Sum_probs=92.1
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEc-C-CCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKT-G-ELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~-~-~~~~~ 239 (387)
..+...|+....+..+.+- .....+.+. .+++||++--.. ..+..+++...........+ . .+..+
T Consensus 92 ~~I~~i~l~~~~~~~~~~~--~~~~~~l~~d~~~~~lywsD~~~--------~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 92 HEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp TEEEEECTTSCSCEEEECS--CSCEEEEEEETTTTEEEEEETTT--------TEEEEEEC------CCCEEEECSSCSCE
T ss_pred ceeEEEccCCcceeEeccc--cCcceEEeeeeccCceEEEecCC--------CeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 4566777777666654221 111222232 368899874332 36777777641100002222 2 11111
Q ss_pred cccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc-EEEE--eCCeEEEEeC-CCCeEEEEeC
Q 044903 240 RFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP-VAAM--DEEVLYGIDE-NSCTLSKYDE 313 (387)
Q Consensus 240 ~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~-~~~~--~~g~ly~~g~-~~~~v~~yd~ 313 (387)
...++ .++.||+.......|.++|++...-+.+-. .....+ .+++ .++.||+.+. ....|+++++
T Consensus 162 ------~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~---~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 162 ------DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp ------EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE---CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred ------ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe---CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 22222 378999997666789999988665444321 111122 3444 3688999874 3468999998
Q ss_pred CCCceEEccccccccCceeEEEe--CCeEEEEecCCceEEEEEec
Q 044903 314 VMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~ 356 (387)
+...=+.+.. .....+.+++.- +++||+.-.....|.++|..
T Consensus 233 dG~~~~~~~~-~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 233 NGVDIYSLVT-ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp TSCSCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCccEEEEE-CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 7653333321 112233444443 67888886556677777766
No 182
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.34 E-value=0.4 Score=44.65 Aligned_cols=185 Identities=6% Similarity=-0.012 Sum_probs=90.3
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
-++..++.|+.+ ..+.+||..+++-...-.-... ...+...++.+.+.|+.+. .+.++|..+.
T Consensus 157 pdg~~lasgs~D-------g~v~iWd~~~~~~~~~~~~h~~--~v~~~s~~~~~l~sgs~d~--------~i~~~d~~~~ 219 (420)
T 4gga_A 157 KEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMTSHSA--RVGSLSWNSYILSSGSRSG--------HIHHHDVRVA 219 (420)
T ss_dssp TTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSS--CEEEEEEETTEEEEEETTS--------EEEEEETTSS
T ss_pred CCCCEEEEEECC-------CeEEEEEcCCCcEEEEEeCCCC--ceEEEeeCCCEEEEEeCCC--------ceeEeeeccc
Confidence 356677777642 4678899988754332111112 2233445667777776543 5667776655
Q ss_pred ccccCeEE--cCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc--eeeccccccCCCCCc--EEEE--eCC
Q 044903 225 EKNSRWEK--TGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT--WDDMREGMVRGWRGP--VAAM--DEE 296 (387)
Q Consensus 225 ~~~~~W~~--~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~--W~~~~~~~~~~~~~~--~~~~--~~g 296 (387)
. ... +....... ......-+|...+.++.+..+.++|..+.+ +..+.. .....+. +++. .++
T Consensus 220 ~----~~~~~~~~h~~~~----~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~--~~~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 220 E----HHVATLSGHSQEV----CGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQT--FTQHQGAVKAVAWCPWQS 289 (420)
T ss_dssp S----CEEEEEECCSSCE----EEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEE--ECCCSSCEEEEEECTTCT
T ss_pred c----eeeEEecccccce----eeeeecCCCCeeeeeeccccceEEeeccccccceeeee--ecccCCceeeeeeCCCcc
Confidence 4 211 11111000 011122245666666666788888886543 222211 0111111 1222 134
Q ss_pred eEEEE-eC-CCCeEEEEeCCCCceEEccccccccCcee-EEEeCC-eEEEEec-CCceEEEEEecCC
Q 044903 297 VLYGI-DE-NSCTLSKYDEVMDDWKEVVKSDLLKGARH-AAAGGG-RVCAVCE-NGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~-g~-~~~~v~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~~-~l~v~gg-~~~~i~v~d~~~~ 358 (387)
.++.. ++ .++.|.+||..+..-..... ....... +...++ .+++.+| .++.|.+||..+.
T Consensus 290 ~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 290 NVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp TEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred cEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 45444 33 56889999998775433221 1111122 223334 4444433 3577888888743
No 183
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.32 E-value=0.38 Score=43.38 Aligned_cols=153 Identities=7% Similarity=-0.029 Sum_probs=80.8
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++++++.|+.+. .+.+||..+.+ -..+....... . -.+.+..-+|.+.+.|+.+..+.+||..+.+
T Consensus 138 ~~~~l~s~s~dg--------~i~~wd~~~~~----~~~~~~~~~~~-~-i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 138 NTEYFIWADNRG--------TIGFQSYEDDS----QYIVHSAKSDV-E-YSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp -CCEEEEEETTC--------CEEEEESSSSC----EEEEECCCSSC-C-CCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred CCCEEEEEeCCC--------cEEEEECCCCc----EEEEEecCCCC-c-eEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 456677776543 68899998887 43322111110 0 0021222367777777777899999998765
Q ss_pred ee--eccccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEE-cccccc--cc--CceeEEEeCCeEEEEecC
Q 044903 275 WD--DMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKE-VVKSDL--LK--GARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 275 W~--~~~~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~-v~~~~~--~~--~~~~~~~~~~~l~v~gg~ 346 (387)
-. .+.. .....-.+++.. ++...+.++ ++.|.+||..+..=.. +..... .. ........+|+.++.++.
T Consensus 204 ~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 204 QASSRFPV--DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SCCEECCC--CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCccEEec--cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 33 2221 001111223332 455555555 4599999997653211 111100 11 111233346777777666
Q ss_pred -CceEEEEEecCCCCCceeEE
Q 044903 347 -GGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 347 -~~~i~v~d~~~~~~~~~W~~ 366 (387)
+..+.+||.... ...|+.
T Consensus 281 ~d~~i~v~~~~~~--~~~~~~ 299 (343)
T 3lrv_A 281 ESNSLTIYKFDKK--TKNWTK 299 (343)
T ss_dssp TTTEEEEEEECTT--TCSEEE
T ss_pred CCCcEEEEEEccc--ccceEe
Confidence 788999998632 235774
No 184
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.30 E-value=0.72 Score=43.11 Aligned_cols=176 Identities=10% Similarity=-0.017 Sum_probs=95.2
Q ss_pred ccEEEeCCCCce-eeC----C-CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCC
Q 044903 165 RPLIFDPICRTW-TFG----P-ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD 238 (387)
Q Consensus 165 ~~~vydp~t~~W-~~l----~-~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~ 238 (387)
.++++|+.++.- +.+ + ....++. .+....++.||+... ...+..||+.+.. -..+...+.
T Consensus 195 ~I~~~d~~~~~~~~~~g~~~~~~~~~p~~-iav~p~~g~lyv~d~---------~~~I~~~d~~~~~----~~~~~~~~~ 260 (409)
T 3hrp_A 195 TVYVYMKASGWAPTRIGQLGSTFSGKIGA-VALDETEEWLYFVDS---------NKNFGRFNVKTQE----VTLIKQLEL 260 (409)
T ss_dssp EEEEEEGGGTTCEEEEEECCTTSCSCCCB-CEECTTSSEEEEECT---------TCEEEEEETTTCC----EEEEEECCC
T ss_pred eEEEEEcCCCceeEEeeeccchhcCCcEE-EEEeCCCCeEEEEEC---------CCcEEEEECCCCC----EEEEecccc
Confidence 688888876532 233 2 1112221 111122678999422 1268899998876 554421111
Q ss_pred Ccccccc-e-eEEEE--CCEEEEEeeeCCeEEEEECCCCceeecc-cc----ccC------CCCCcE-EEE-eCCeEEEE
Q 044903 239 GRFSREA-I-DAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMR-EG----MVR------GWRGPV-AAM-DEEVLYGI 301 (387)
Q Consensus 239 ~~~~~~~-~-~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~-~~----~~~------~~~~~~-~~~-~~g~ly~~ 301 (387)
....... . ..++- ++.||+.......+.+||+... -..+. .. ... ....+. +++ .+|+||+.
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 0000011 1 33333 5899998766678999988654 22221 10 000 012233 333 25689999
Q ss_pred eC-CCCeEEEEeCCCCceEEccccc-------------cccCceeEEEe-CCeEEEEecCCceEEEEEe
Q 044903 302 DE-NSCTLSKYDEVMDDWKEVVKSD-------------LLKGARHAAAG-GGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 302 g~-~~~~v~~yd~~~~~W~~v~~~~-------------~~~~~~~~~~~-~~~l~v~gg~~~~i~v~d~ 355 (387)
+. ....|.+||+.+..-+.+...+ .+..+..++.. +|.|||....++.|..+++
T Consensus 340 d~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred eCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 87 7889999996666555443221 12224444443 5889998777778877765
No 185
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.23 E-value=0.52 Score=40.79 Aligned_cols=151 Identities=11% Similarity=-0.003 Sum_probs=84.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++.||+.... ...+.++|+....-+.+.+....+....+.. .+++||+..... ....++++++...
T Consensus 90 ~~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~------~~~~I~~~~~dg~ 156 (267)
T 1npe_A 90 GRTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR------DNPKIETSHMDGT 156 (267)
T ss_dssp TTEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS------SSCEEEEEETTSC
T ss_pred CCeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC------CCcEEEEEecCCC
Confidence 5789987542 2568888887544333321111111222222 268999985331 1236778887654
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEe
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGID 302 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g 302 (387)
. -..+...... .+ ...+.- ++.||+.......+.+||+....=..+..... ....+++.++.||+..
T Consensus 157 ~----~~~~~~~~~~-~P---~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---~P~gi~~d~~~lyva~ 225 (267)
T 1npe_A 157 N----RRILAQDNLG-LP---NGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSYGKNLYYTD 225 (267)
T ss_dssp C----CEEEECTTCS-CE---EEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEETTEEEEEE
T ss_pred C----cEEEEECCCC-CC---cEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC---CceEEEEeCCEEEEEE
Confidence 3 3333211111 10 222222 57899987666889999997543222211111 1124556788999998
Q ss_pred CCCCeEEEEeCCCCceEE
Q 044903 303 ENSCTLSKYDEVMDDWKE 320 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~ 320 (387)
...+.|.++|+++.+-..
T Consensus 226 ~~~~~v~~~d~~~g~~~~ 243 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMD 243 (267)
T ss_dssp TTTTEEEEEETTTTEEEE
T ss_pred CCCCeEEEEeCCCCCceE
Confidence 777899999998765443
No 186
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.22 E-value=0.31 Score=43.76 Aligned_cols=183 Identities=9% Similarity=0.034 Sum_probs=94.2
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCce-eeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRR-WCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~-~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
+.+++.|+.+ ..+.+||..+........+..... -.+.+.. +++.++.|+.+. .+.+||..+.
T Consensus 54 g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg--------~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWA-------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK--------TAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETT-------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTTT
T ss_pred ceEEEEECCC-------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC--------cEEEEEcCCC
Confidence 3677776632 357888887633222111111111 1111222 556666666543 7889999888
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYG 300 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~ 300 (387)
+ -........+ ...+.+ ++.+++.++.+..+.+||..+.+-...-. ......+....... .+
T Consensus 119 ~----~~~~~~~~~~------v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~-~~ 184 (368)
T 3mmy_A 119 Q----AIQIAQHDAP------VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ---LPERCYCADVIYPM-AV 184 (368)
T ss_dssp E----EEEEEECSSC------EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE---CSSCEEEEEEETTE-EE
T ss_pred C----ceeeccccCc------eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe---cCCCceEEEecCCe-eE
Confidence 7 5543322211 223332 66777777777889999987664221111 11112233344444 44
Q ss_pred EeCCCCeEEEEeCCCCc--eEEccccccccCceeEEEeCC----eEEEEecCCceEEEEEecCC
Q 044903 301 IDENSCTLSKYDEVMDD--WKEVVKSDLLKGARHAAAGGG----RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~~--W~~v~~~~~~~~~~~~~~~~~----~l~v~gg~~~~i~v~d~~~~ 358 (387)
++..++.+.+||..... +..+...............+. ..++.|+.++.+.+||....
T Consensus 185 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~ 248 (368)
T 3mmy_A 185 VATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPP 248 (368)
T ss_dssp EEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCS
T ss_pred EEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCC
Confidence 44457789999987653 333322211111222222222 23677677888888888743
No 187
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.20 E-value=0.36 Score=47.46 Aligned_cols=122 Identities=11% Similarity=0.098 Sum_probs=74.3
Q ss_pred eeEEeeCCEEEEEecCCCCCCCCCCceEEEEeC-CCCccccCeEEcCCCCCCccc-----ccceeEEEECCEEEEEeeeC
Q 044903 189 CAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDL-MNGEKNSRWEKTGELKDGRFS-----REAIDAVGWKGKLCLVNVKG 262 (387)
Q Consensus 189 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~-~t~~~~~~W~~~~~~~~~~~~-----~~~~~~v~~~g~lyv~gg~~ 262 (387)
.+.++.++.||+.... ...+..+|. .+++.. |+.-......... ......++.++++|+... .
T Consensus 56 ~~P~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-d 124 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF--------PNNTYALNLNDPGKIV--WQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-N 124 (571)
T ss_dssp SCCEEETTEEEEECST--------TTCEEEEETTCTTSEE--EEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-T
T ss_pred cccEEECCEEEEEeCC--------CCEEEEEeCCCCccEE--EEEcCCCCccccccccccccccccEEECCEEEEEeC-C
Confidence 3445679999998542 126889999 888866 9875433211100 001224567999998743 3
Q ss_pred CeEEEEECCCC--ceeeccccccCCC-CCcEEEEeCCeEEEEeCC-----CCeEEEEeCCCC--ceEEc
Q 044903 263 AEGAVYDVVAN--TWDDMREGMVRGW-RGPVAAMDEEVLYGIDEN-----SCTLSKYDEVMD--DWKEV 321 (387)
Q Consensus 263 ~~i~~yD~~~~--~W~~~~~~~~~~~-~~~~~~~~~g~ly~~g~~-----~~~v~~yd~~~~--~W~~v 321 (387)
..+.++|.+++ .|+.-......+. ...+.++.++++|+-... ++.|+.||.++. .|+.-
T Consensus 125 g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 125 GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 47999999876 6975432111111 112234468888876532 578999999764 58653
No 188
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.19 E-value=0.78 Score=46.87 Aligned_cols=181 Identities=11% Similarity=0.070 Sum_probs=102.0
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCC------CCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL------VTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~------~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
++.||+... .-+++||+.+++|+..... +..........-++.||+... . -+..|
T Consensus 462 ~g~lwigt~---------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~--------Gl~~~ 522 (795)
T 4a2l_A 462 EGNLWLGTL---------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--E--------GLSVF 522 (795)
T ss_dssp SSCEEEEES---------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--S--------CEEEE
T ss_pred CCCEEEEec---------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--C--------ceEEE
Confidence 466766432 3478999999999887533 111112222223577887643 1 36788
Q ss_pred eCCCCccccCeEEcCCC-CCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeecc--ccccCCCCCcEEEEe
Q 044903 220 DLMNGEKNSRWEKTGEL-KDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMR--EGMVRGWRGPVAAMD 294 (387)
Q Consensus 220 d~~t~~~~~~W~~~~~~-~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~--~~~~~~~~~~~~~~~ 294 (387)
|+.+++ + ..... ...........++.. +|.|++-+. . .+..||+.+++++... .+++... -.+++..
T Consensus 523 ~~~~~~----~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d 594 (795)
T 4a2l_A 523 KQEGLD----I-QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKRYNTTNGLPNNV-VYGILED 594 (795)
T ss_dssp EEETTE----E-EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECGGGTCSCSC-EEEEEEC
T ss_pred eCCCCe----E-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEEeCCCCCCchhh-eEEEEEC
Confidence 888887 7 43311 111111111223333 577776533 2 6899999999887654 2233221 1223332
Q ss_pred -CCeEEEEeCCCCeEEEEeCCCCceEEcccccccc-Cc---eeEE-EeCCeEEEEecCCceEEEEEecC
Q 044903 295 -EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLK-GA---RHAA-AGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 295 -~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~-~~---~~~~-~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
+|.||+-+ ...+.+||+++++++......... .. .+++ .-+|.|++-+ ..++..+|+..
T Consensus 595 ~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~--~~Gl~~~~p~~ 659 (795)
T 4a2l_A 595 SFGRLWLST--NRGISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGG--INGITTFRPEL 659 (795)
T ss_dssp TTSCEEEEE--TTEEEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEE--TTEEEEECGGG
T ss_pred CCCCEEEEc--CCceEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEec--CCceEEEcHHH
Confidence 57788875 467999999999888765322211 11 2233 3467777653 34577788763
No 189
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.14 E-value=0.64 Score=41.00 Aligned_cols=195 Identities=12% Similarity=0.126 Sum_probs=100.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCCcee-eeEEee---CCEEEEEecCCCCCCCCCCceEEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPRRW-CAAGYS---RGAVYVASGIGSQFSSDVAKSVEKW 219 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~r~~-~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~vy 219 (387)
++.+++.|+.+ ..+.+||..+. .++.+..+...... .+.+.. ++.+++.|+.+. .+.+|
T Consensus 22 ~~~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg--------~v~vw 86 (351)
T 3f3f_A 22 YGRHVATCSSD-------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK--------TVKLW 86 (351)
T ss_dssp SSSEEEEEETT-------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS--------CEEEE
T ss_pred CCCEEEEeeCC-------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC--------eEEEE
Confidence 45556665532 35677776643 33332222211111 122222 366777776643 57788
Q ss_pred eCCCCccc---cCeEEcCCCCCCcccccceeEEEE--C--CEEEEEeeeCCeEEEEECCCCc----eeeccc-----ccc
Q 044903 220 DLMNGEKN---SRWEKTGELKDGRFSREAIDAVGW--K--GKLCLVNVKGAEGAVYDVVANT----WDDMRE-----GMV 283 (387)
Q Consensus 220 d~~t~~~~---~~W~~~~~~~~~~~~~~~~~~v~~--~--g~lyv~gg~~~~i~~yD~~~~~----W~~~~~-----~~~ 283 (387)
|..+.+.. -.|..+..+.... .....+.+ + +.+.+.++.+..+.+||..+.+ |..... ..+
T Consensus 87 d~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 163 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTLNDSK---GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPP 163 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEECCCS---SCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCC
T ss_pred ecCCCcccccccCcceeeeecccC---CceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccccc
Confidence 87764200 0033333222111 11223333 2 6666676766789999987653 321110 000
Q ss_pred CCC--CCcEEEEe----CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce-eEEE-eCC----eEEEEecCCceEE
Q 044903 284 RGW--RGPVAAMD----EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR-HAAA-GGG----RVCAVCENGGGIV 351 (387)
Q Consensus 284 ~~~--~~~~~~~~----~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~-~~~~-~~~----~l~v~gg~~~~i~ 351 (387)
... ...+++.. ++.+++.++.++.+..++........+.......... ++.. .++ ++++.|+.++.+.
T Consensus 164 ~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 164 ANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 011 11122221 2567777777778877788777776655554444332 2232 344 7888888889999
Q ss_pred EEEecCC
Q 044903 352 VVDVKAA 358 (387)
Q Consensus 352 v~d~~~~ 358 (387)
+||+...
T Consensus 244 iwd~~~~ 250 (351)
T 3f3f_A 244 IFKITEK 250 (351)
T ss_dssp EEEEEEC
T ss_pred EEeCCCC
Confidence 9999853
No 190
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.11 E-value=0.19 Score=47.18 Aligned_cols=105 Identities=10% Similarity=-0.008 Sum_probs=59.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCc-eeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEcccccccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANT-WDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~-W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~ 328 (387)
++.+++.++....+.+||..+.. ...+.........-.+++.. +..+++.++.++.|.+||..+.. ..+.......
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-~~~~~~~~h~ 321 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-LKLHSFESHK 321 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-SCSEEEECCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-CCeEEeecCC
Confidence 45677777767899999998652 11111100111011123322 33488888889999999997632 1111222222
Q ss_pred CceeEEEe---CCeEEEEecCCceEEEEEecC
Q 044903 329 GARHAAAG---GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 329 ~~~~~~~~---~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.....+.+ +..+++.++.++.+.+||+..
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 22222222 336888888888999999985
No 191
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.11 E-value=0.0018 Score=64.03 Aligned_cols=34 Identities=18% Similarity=0.510 Sum_probs=25.2
Q ss_pred CCCCCCChHHHHHHHhhhcC----hhhHHHhhHhhhhh
Q 044903 40 QPLLPGLPDHIAHLCLSHVH----PSILHNVCHSWRRL 73 (387)
Q Consensus 40 ~~~~~~LP~dl~~~iL~rLP----~~~~r~Vck~W~~l 73 (387)
...|..||+||+.+||++|| ..+++.|||+|+.+
T Consensus 3 ~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 3 KRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred ccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 35788999999999999999 66788999999988
No 192
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.10 E-value=0.7 Score=47.19 Aligned_cols=172 Identities=10% Similarity=0.056 Sum_probs=97.2
Q ss_pred ccEEEeCCCCceeeCCC----CCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC-
Q 044903 165 RPLIFDPICRTWTFGPE----LVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG- 239 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~----~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~- 239 (387)
-+++||+.+++++.... ++..........-++.|++... .-+.+||+.+++ |........+
T Consensus 428 Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~----------~Gl~~~~~~~~~----~~~~~~~~~~~ 493 (795)
T 4a2l_A 428 GLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL----------SALVRFNPEQRS----FTTIEKEKDGT 493 (795)
T ss_dssp EEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES----------SCEEEEETTTTE----EEECCBCTTCC
T ss_pred ceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec----------CceeEEeCCCCe----EEEcccccccc
Confidence 47899999998877543 2212211112222567777542 146889999998 8877533100
Q ss_pred cccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc-----cccCCCCCcEEEE-eCCeEEEEeCCCCeEEEE
Q 044903 240 RFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE-----GMVRGWRGPVAAM-DEEVLYGIDENSCTLSKY 311 (387)
Q Consensus 240 ~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-----~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~y 311 (387)
........+... +|.|++-+. ..+..||+.++++ .... .++.. ...+++. .+|.|++-.. +.+.+|
T Consensus 494 ~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~--~Gl~~~ 567 (795)
T 4a2l_A 494 PVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR--EGFYCF 567 (795)
T ss_dssp BCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES--SCEEEE
T ss_pred ccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC--CCceeE
Confidence 011011222333 567777543 4688999988887 3321 11111 1112222 3567887653 379999
Q ss_pred eCCCCceEEccccccccC-c-eeEEE-eCCeEEEEecCCceEEEEEecCC
Q 044903 312 DEVMDDWKEVVKSDLLKG-A-RHAAA-GGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~-~-~~~~~-~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
|+++++++.......... . .+++. -+|.|++.+ ..++..+|+.+.
T Consensus 568 d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~~~~ 615 (795)
T 4a2l_A 568 NEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNPETE 615 (795)
T ss_dssp ETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEETTTT
T ss_pred CCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcCCCC
Confidence 999998887653222111 1 23333 367888875 466788888754
No 193
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.10 E-value=0.92 Score=48.69 Aligned_cols=146 Identities=12% Similarity=0.092 Sum_probs=77.2
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.++..++.|+.+ ..+.+||..+.+-.. +.. ........+..-+++..+.|+.+. .+.+||..+
T Consensus 625 ~~~~~l~s~~~d-------~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~d~--------~v~vwd~~~ 688 (1249)
T 3sfz_A 625 QDGQRIASCGAD-------KTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDSYIATCSADK--------KVKIWDSAT 688 (1249)
T ss_dssp TTSSEEEEEETT-------SCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTS--------EEEEEETTT
T ss_pred CCCCEEEEEeCC-------CeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCCEEEEEeCCC--------eEEEEECCC
Confidence 366677776632 467899998876433 221 111111111222566666666533 689999988
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeE
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVL 298 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~l 298 (387)
++ -...-.-... ....+.+ ++.+.+.|+....+.+||..+..-...-...... -.+++ ..++..
T Consensus 689 ~~----~~~~~~~~~~-----~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~--v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 689 GK----LVHTYDEHSE-----QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNS--VNHCRFSPDDEL 757 (1249)
T ss_dssp CC----EEEEEECCSS-----CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSC--EEEEEECSSTTE
T ss_pred Cc----eEEEEcCCCC-----cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCC--EEEEEEecCCCE
Confidence 77 3322111111 1223333 3345555666678999999877543221111111 11122 234566
Q ss_pred EEEeCCCCeEEEEeCCCCc
Q 044903 299 YGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~ 317 (387)
.+.++.++.|.+||..+..
T Consensus 758 l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 758 LASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp EEEEESSSEEEEEEGGGTE
T ss_pred EEEEECCCeEEEEeCCCCc
Confidence 6667678889999886653
No 194
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.01 E-value=0.73 Score=41.47 Aligned_cols=141 Identities=9% Similarity=0.072 Sum_probs=75.1
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeE-EcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWE-KTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~-~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~ 271 (387)
++.+.+.|+.+. .+.+||..+.+ -. .+..-.. ...++.+ +++..+.++.+..+.+||..
T Consensus 87 ~~~~l~s~s~D~--------~v~lwd~~~~~----~~~~~~~h~~------~v~~v~~sp~~~~l~s~~~d~~i~~wd~~ 148 (343)
T 2xzm_R 87 ENCFAISSSWDK--------TLRLWDLRTGT----TYKRFVGHQS------EVYSVAFSPDNRQILSAGAEREIKLWNIL 148 (343)
T ss_dssp STTEEEEEETTS--------EEEEEETTSSC----EEEEEECCCS------CEEEEEECSSTTEEEEEETTSCEEEEESS
T ss_pred CCCEEEEEcCCC--------cEEEEECCCCc----EEEEEcCCCC------cEEEEEECCCCCEEEEEcCCCEEEEEecc
Confidence 455666666543 78899988876 32 2211111 1222332 56666677777889999986
Q ss_pred CCceeeccccccCCCCCcEEEEe-C----------CeEEEEeCCCCeEEEEeCCCCceEEccccccccCcee--EEEeCC
Q 044903 272 ANTWDDMREGMVRGWRGPVAAMD-E----------EVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH--AAAGGG 338 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~~~-~----------g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~~ 338 (387)
...-............-.+++.. . +.+++.++.++.|.+||.... ............. ....+|
T Consensus 149 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~---~~~~~~~h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 149 GECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQ---IRYTFKAHESNVNHLSISPNG 225 (343)
T ss_dssp SCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTE---EEEEEECCSSCEEEEEECTTS
T ss_pred CCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCc---eeEEEcCccccceEEEECCCC
Confidence 44322221100000000111111 1 245666777899999995432 2222222222222 223478
Q ss_pred eEEEEecCCceEEEEEec
Q 044903 339 RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 339 ~l~v~gg~~~~i~v~d~~ 356 (387)
+.++.|+.++.+.+||+.
T Consensus 226 ~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 226 KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp SEEEEEETTCEEEEEESS
T ss_pred CEEEEEcCCCeEEEEECC
Confidence 888888888999999984
No 195
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.01 E-value=0.32 Score=47.43 Aligned_cols=146 Identities=9% Similarity=-0.004 Sum_probs=80.8
Q ss_pred EEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--C-CEEEEEeeeCCeEEEEECCCCc
Q 044903 198 VYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--K-GKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 198 iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~-g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
+++.|+.+. .+.+||..+.+ -... +............+.+ + +.+++.++....+.+||..+.+
T Consensus 175 ~l~~~~~d~--------~v~vwd~~~~~----~~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 175 RSMTVGDDG--------SVVFYQGPPFK----FSAS--DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE 240 (615)
T ss_dssp EEEEEETTT--------EEEEEETTTBE----EEEE--ECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC
T ss_pred EEEEEeCCC--------cEEEEeCCCcc----eeee--ecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 666666543 68888877655 2221 1111000001223333 4 6777777777889999998765
Q ss_pred eeecc-cc-ccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccc---cccCceeEEEeCCeEEEEecCCce
Q 044903 275 WDDMR-EG-MVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSD---LLKGARHAAAGGGRVCAVCENGGG 349 (387)
Q Consensus 275 W~~~~-~~-~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~---~~~~~~~~~~~~~~l~v~gg~~~~ 349 (387)
-...- .. ......-.+++..++..++.++.++.+.+||..+.+-......+ .......+...++..++.|+.++.
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGT 320 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSC
T ss_pred EeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCC
Confidence 43221 10 01111112233326777777777899999999876543322222 111223333347777888788889
Q ss_pred EEEEEecC
Q 044903 350 IVVVDVKA 357 (387)
Q Consensus 350 i~v~d~~~ 357 (387)
+.+||..+
T Consensus 321 i~~~d~~~ 328 (615)
T 1pgu_A 321 LNFYELGH 328 (615)
T ss_dssp EEEEETTE
T ss_pred EEEEECCC
Confidence 99999874
No 196
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.99 E-value=0.22 Score=49.96 Aligned_cols=188 Identities=11% Similarity=0.044 Sum_probs=93.3
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
.++.+++.|+.+ ..+.+||..+.+-...-.-........+..-+++.++.|+.+. .+.+||....
T Consensus 440 ~~g~~l~sgs~D-------g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~--------~i~iwd~~~~ 504 (694)
T 3dm0_A 440 SDGQFALSGSWD-------GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDR--------TIKLWNTLGE 504 (694)
T ss_dssp TTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTS--------CEEEECTTSC
T ss_pred CCCCEEEEEeCC-------CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCC--------EEEEEECCCC
Confidence 356666666642 4678889887653321000111111111122455666666543 6777776554
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEE--CC--EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEE
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGW--KG--KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLY 299 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g--~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly 299 (387)
. =..+...... ......++.+ ++ .+.+.++.+..+.+||+.+.+-...-.. ..+ .-.+++. .+++++
T Consensus 505 ~----~~~~~~~~~~--h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~-h~~-~v~~v~~spdg~~l 576 (694)
T 3dm0_A 505 C----KYTISEGGEG--HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG-HTG-YVSTVAVSPDGSLC 576 (694)
T ss_dssp E----EEEECSSTTS--CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC-CSS-CEEEEEECTTSSEE
T ss_pred c----ceeeccCCCC--CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC-CCC-CEEEEEEeCCCCEE
Confidence 3 1122111111 0111223333 22 3455566668899999987643322110 111 1112222 356777
Q ss_pred EEeCCCCeEEEEeCCCCceEEccccccccCceeEEEe-CCeEEEEecCCceEEEEEecCC
Q 044903 300 GIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG-GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~-~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.++.++.|.+||..+.+- +..........++... ++.+++. +.+..|.+||+.+.
T Consensus 577 ~sg~~Dg~i~iwd~~~~~~--~~~~~~~~~v~~~~~sp~~~~l~~-~~~~~i~iwd~~~~ 633 (694)
T 3dm0_A 577 ASGGKDGVVLLWDLAEGKK--LYSLEANSVIHALCFSPNRYWLCA-ATEHGIKIWDLESK 633 (694)
T ss_dssp EEEETTSBCEEEETTTTEE--EECCBCSSCEEEEEECSSSSEEEE-EETTEEEEEETTTT
T ss_pred EEEeCCCeEEEEECCCCce--EEEecCCCcEEEEEEcCCCcEEEE-EcCCCEEEEECCCC
Confidence 7888889999999987642 2222222222223333 4444444 55667999998754
No 197
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.94 E-value=1.3 Score=43.83 Aligned_cols=183 Identities=13% Similarity=-0.023 Sum_probs=102.6
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCc-eeeCC--CCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRT-WTFGP--ELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDL 221 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~-W~~l~--~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~ 221 (387)
.++.||+.-- ....+.++++.... +..+- .+..|. ..+....+++||++-.. ...++++|+
T Consensus 50 ~~~~ly~sD~-------~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~--------~~~I~v~~~ 113 (619)
T 3s94_A 50 SHGLIYWSDV-------SEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSE--------TNRIEVSNL 113 (619)
T ss_dssp TTTEEEEEET-------TTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETT--------TTEEEEEET
T ss_pred CCCEEEEEEC-------CCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCC--------CCEEEEEEC
Confidence 3678888743 22467777776542 23221 111111 12222247899998533 247899998
Q ss_pred CCCccccCeEEc--CCCCCCcccccceeEEE--ECCEEEEEee-eCCeEEEEECCCCceeecc-ccccCCCCCc-EEEEe
Q 044903 222 MNGEKNSRWEKT--GELKDGRFSREAIDAVG--WKGKLCLVNV-KGAEGAVYDVVANTWDDMR-EGMVRGWRGP-VAAMD 294 (387)
Q Consensus 222 ~t~~~~~~W~~~--~~~~~~~~~~~~~~~v~--~~g~lyv~gg-~~~~i~~yD~~~~~W~~~~-~~~~~~~~~~-~~~~~ 294 (387)
.... =+.+ ..+..|+ ..++ .+|.||+..- ....++..+++...-+.+- ..+ ..+ .+++.
T Consensus 114 dG~~----~~~l~~~~l~~P~------~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~----~~P~Glald 179 (619)
T 3s94_A 114 DGSL----RKVLFWQELDQPR------AIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEI----YWPNGLTLD 179 (619)
T ss_dssp TSCS----CEEEECSSCSCCC------CEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSC----SSEEEEEEE
T ss_pred CCCC----EEEEEeCCCCCCc------eEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCC----CCCcEEEEE
Confidence 7654 2222 2333222 2233 3689999862 2367888888654333322 111 112 33443
Q ss_pred --CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 --EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 --~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+++||+.+...+.|+++|.+...=+.+.. .....+++++..++.||+.-.....|.++|..++
T Consensus 180 ~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~-~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg 244 (619)
T 3s94_A 180 YEEQKLYWADAKLNFIHKSNLDGTNRQAVVK-GSLPHPFALTLFEDILYWTDWSTHSILACNKYTG 244 (619)
T ss_dssp TTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSSEEEEECTTTCSEEEEESSSC
T ss_pred ccCCEEEEEeCCCCeEEEecCCCCccEEEEe-CCCCCceEEEEeCCEEEEecCCCCEEEEEECCCC
Confidence 68999999878899999997643222221 1233456788888899999667788999998754
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.92 E-value=0.63 Score=41.81 Aligned_cols=182 Identities=12% Similarity=0.003 Sum_probs=97.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++.+|+++.. ...+++||+.+++.+... .+. .....+..-++++++... ..+.+||+.+++
T Consensus 60 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~----------~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNIL-------ERELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD----------DGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGG-------GTEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET----------TEEEEEETTTCC
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC----------CCEEEEECCCCc
Confidence 3678887643 146899999988765432 121 112222334678887641 147899999888
Q ss_pred cccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeee------CCeEEEEECCCCceeeccccccCCCCCcEEEEe-CC
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVK------GAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE 296 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~------~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g 296 (387)
.+.+...+..... .....+. -+|++|+.... ...++.|| +++.+.+...... ...++.. ++
T Consensus 121 ----~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~---~~~i~~s~dg 190 (326)
T 2ghs_A 121 ----LTLHAELESDLPG-NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISI---PNSICFSPDG 190 (326)
T ss_dssp ----EEEEECSSTTCTT-EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESS---EEEEEECTTS
T ss_pred ----EEEEeeCCCCCCC-CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcc---cCCeEEcCCC
Confidence 7766543221100 1111222 36788875432 14678888 4555444221111 1123332 34
Q ss_pred -eEEEEeCCCCeEEEEeCC--CC-ceE---Eccccccc-cCceeEE-EeCCeEEEEecCCceEEEEEec
Q 044903 297 -VLYGIDENSCTLSKYDEV--MD-DWK---EVVKSDLL-KGARHAA-AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 297 -~ly~~g~~~~~v~~yd~~--~~-~W~---~v~~~~~~-~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
.||+.+...+.|++||.+ +. ... .+...... .....++ .-+|.||+...+++.+.+||+.
T Consensus 191 ~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 191 TTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp CEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 688887667889999975 43 221 11111100 1112232 3367888876556778888875
No 199
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.88 E-value=0.73 Score=41.06 Aligned_cols=181 Identities=8% Similarity=-0.032 Sum_probs=89.0
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
.++..++.|+.+ ..+.+||..+++-.. +..-. .........-++.+++.|+.+. .+.+||...
T Consensus 75 ~dg~~l~s~s~D-------~~v~~wd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~s~D~--------~i~vwd~~~ 138 (319)
T 3frx_A 75 ADGAYALSASWD-------KTLRLWDVATGETYQRFVGHK-SDVMSVDIDKKASMIISGSRDK--------TIKVWTIKG 138 (319)
T ss_dssp TTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCS-SCEEEEEECTTSCEEEEEETTS--------CEEEEETTS
T ss_pred CCCCEEEEEeCC-------CEEEEEECCCCCeeEEEccCC-CcEEEEEEcCCCCEEEEEeCCC--------eEEEEECCC
Confidence 355666666532 467889988775322 21111 1111111122456667776544 577888765
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEE--------CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-Ee
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGW--------KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MD 294 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~--------~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~ 294 (387)
.. -..+..-... ...+.+ ++.+.+.++.+..+.+||+.+.+-...-.+- ...-.+++ ..
T Consensus 139 ~~----~~~~~~h~~~------v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h--~~~v~~~~~sp 206 (319)
T 3frx_A 139 QC----LATLLGHNDW------VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGH--NSNINTLTASP 206 (319)
T ss_dssp CE----EEEECCCSSC------EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCC--CSCEEEEEECT
T ss_pred Ce----EEEEeccCCc------EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCC--CCcEEEEEEcC
Confidence 44 3332211111 111111 2335556666688999998765432211100 00111222 23
Q ss_pred CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE-EeCCeEEEEecCCceEEEEEec
Q 044903 295 EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
++++++.++.++.|.+||..+.+=. ...........++ ..++..++.+ .+..+.+++..
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~v~~~~~sp~~~~la~~-~~~~i~v~~~~ 266 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAM--YTLSAQDEVFSLAFSPNRYWLAAA-TATGIKVFSLD 266 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEE--EEEECCSCEEEEEECSSSSEEEEE-ETTEEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEE--EEecCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEeC
Confidence 5677777888899999999876422 2221111122222 3355555553 34557777765
No 200
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.88 E-value=0.19 Score=44.63 Aligned_cols=138 Identities=17% Similarity=0.141 Sum_probs=68.0
Q ss_pred CccEEEeCCCCceeeCCCCCCC--ceeeeEEeeCC-EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 164 TRPLIFDPICRTWTFGPELVTP--RRWCAAGYSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~--r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
..+.++|+.+.+-...-.++.. +....+..-++ .+|+.+... ..+.+||..+.+ -...-..+.+.
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~--------~~v~~~d~~~~~----~~~~~~~~~~~ 78 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS--------ESLVKIDLVTGE----TLGRIDLSTPE 78 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT--------TEEEEEETTTCC----EEEEEECCBTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC--------CeEEEEECCCCC----eEeeEEcCCcc
Confidence 4678888887755432222211 11111222234 678776532 368999998877 33221111100
Q ss_pred -ccccceeEE-EECC-EEEEEee-----------eCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCC-eEEEEeCC
Q 044903 241 -FSREAIDAV-GWKG-KLCLVNV-----------KGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEE-VLYGIDEN 304 (387)
Q Consensus 241 -~~~~~~~~v-~~~g-~lyv~gg-----------~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g-~ly~~g~~ 304 (387)
........+ .-+| .+|+... ....+.+||+.+.+....-. .... ...++. .++ .||+.
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~--~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQ--ITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSS--CCCEEECTTSSCEEEE---
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe-CCCC--cceeEECCCCCEEEEe---
Confidence 000001122 2245 6776641 13689999998765432211 1111 122232 234 46666
Q ss_pred CCeEEEEeCCCCceE
Q 044903 305 SCTLSKYDEVMDDWK 319 (387)
Q Consensus 305 ~~~v~~yd~~~~~W~ 319 (387)
++.+++||.++.+-.
T Consensus 153 ~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 153 GRDLHVMDPEAGTLV 167 (337)
T ss_dssp SSSEEEEETTTTEEE
T ss_pred CCeEEEEECCCCcEe
Confidence 468999999877544
No 201
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.85 E-value=0.57 Score=46.21 Aligned_cols=149 Identities=8% Similarity=0.071 Sum_probs=83.9
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcC-CC-CCCcccccceeEEEE--CCEEEEEeeeCCeEEEEEC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG-EL-KDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~-~~-~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~ 270 (387)
++++++.|+.+. .+.+||..+++ -...- .. ...........++.+ +|+..+.++.+..+.++|+
T Consensus 201 dg~~las~s~D~--------~i~lwd~~~g~----~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 201 DGSLFASTGGDG--------TIVLYNGVDGT----KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNV 268 (611)
T ss_dssp TSSEEEEEETTS--------CEEEEETTTCC----EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCEEEEEECCC--------cEEEEECCCCc----EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 567777777644 67889988776 33221 10 000000111223333 6777777777789999999
Q ss_pred CCCceeec-cccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCcee--EEEeCCeEEEEecCC
Q 044903 271 VANTWDDM-REGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVCENG 347 (387)
Q Consensus 271 ~~~~W~~~-~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~~~l~v~gg~~ 347 (387)
.+.+.... ....... .....+..++...+.+..++.+..||+++..-.. ....+..... ....+|+.++.++.+
T Consensus 269 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~--~~~gh~~~v~~l~~spdg~~l~s~s~D 345 (611)
T 1nr0_A 269 ATLKVEKTIPVGTRIE-DQQLGIIWTKQALVSISANGFINFVNPELGSIDQ--VRYGHNKAITALSSSADGKTLFSADAE 345 (611)
T ss_dssp TTTEEEEEEECCSSGG-GCEEEEEECSSCEEEEETTCCEEEEETTTTEEEE--EECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCceeeeecCCCCcc-ceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcce--EEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 88765432 1110000 0112223355556666678899999988765222 2222222222 223478888888888
Q ss_pred ceEEEEEecCC
Q 044903 348 GGIVVVDVKAA 358 (387)
Q Consensus 348 ~~i~v~d~~~~ 358 (387)
+.+.+||+.++
T Consensus 346 ~~v~~Wd~~~~ 356 (611)
T 1nr0_A 346 GHINSWDISTG 356 (611)
T ss_dssp SCEEEEETTTC
T ss_pred CcEEEEECCCC
Confidence 99999998753
No 202
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.81 E-value=0.97 Score=43.99 Aligned_cols=186 Identities=11% Similarity=-0.064 Sum_probs=93.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-C-CEEEEEecCCCCCCCCCCceEEEEeC--
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-R-GAVYVASGIGSQFSSDVAKSVEKWDL-- 221 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~vyd~-- 221 (387)
++.+|+.+..+ ..+.++|..+++-...-+.... .+..+.. + ..+|+.+. + ..+.+||.
T Consensus 148 ~~~~~vs~~~d-------~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~~l~v~~~-d--------~~V~v~D~~~ 209 (543)
T 1nir_A 148 PNLFSVTLRDA-------GQIALVDGDSKKIVKVIDTGYA--VHISRMSASGRYLLVIGR-D--------ARIDMIDLWA 209 (543)
T ss_dssp GGEEEEEEGGG-------TEEEEEETTTCCEEEEEECSTT--EEEEEECTTSCEEEEEET-T--------SEEEEEETTS
T ss_pred CCEEEEEEcCC-------CeEEEEECCCceEEEEEecCcc--cceEEECCCCCEEEEECC-C--------CeEEEEECcC
Confidence 56777776532 4678889988765432111111 2223222 3 45676642 1 47899999
Q ss_pred CCCccccCeEEcCCCCCCcccccceeEEEE-----CC-EEEEEeeeCCeEEEEECCCCcee-eccc-ccc-------CCC
Q 044903 222 MNGEKNSRWEKTGELKDGRFSREAIDAVGW-----KG-KLCLVNVKGAEGAVYDVVANTWD-DMRE-GMV-------RGW 286 (387)
Q Consensus 222 ~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~-----~g-~lyv~gg~~~~i~~yD~~~~~W~-~~~~-~~~-------~~~ 286 (387)
.+.+ - +..++..... ...+.- +| .+|+.+.....+.++|..+.+=. .++. ++. ...
T Consensus 210 ~t~~----~--~~~i~~g~~p---~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~ 280 (543)
T 1nir_A 210 KEPT----K--VAEIKIGIEA---RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEP 280 (543)
T ss_dssp SSCE----E--EEEEECCSEE---EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCC
T ss_pred CCCc----E--EEEEecCCCc---ceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCC
Confidence 6654 2 2222222111 222222 45 46666555678999998775432 2221 110 010
Q ss_pred CCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce-eEEEeCCe-EEEEecCCceEEEEEecCC
Q 044903 287 RGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR-HAAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 287 ~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~-~~~~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
+..+++.. ++.+|+....++.|+++|..+.+-..+...+.....+ ....-+|+ +|+.+..++.|.++|..++
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg 356 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR 356 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC
Confidence 11122222 4566766667889999998765322221222111122 22333555 5555445677888887754
No 203
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.80 E-value=0.61 Score=43.53 Aligned_cols=139 Identities=6% Similarity=-0.080 Sum_probs=74.5
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
..++++|..+++.+.+.......... .-.-+++.+++++... ....++++|..+.+ -..+.....
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~-~~spdg~~l~~~s~~~-----g~~~i~~~d~~~~~----~~~l~~~~~----- 311 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEP-TWFPDSQNLAFTSDQA-----GRPQVYKVNINGGA----PQRITWEGS----- 311 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEE-EECTTSSEEEEEECTT-----SSCEEEEEETTSSC----CEECCCSSS-----
T ss_pred ceEEEEECCCCCEEeCcCCCCcccce-EECCCCCEEEEEECCC-----CCcEEEEEECCCCC----EEEEecCCC-----
Confidence 46899999998887775433211111 1112444333333211 12368888998877 555432111
Q ss_pred cceeEEE--ECCEEEEEeeeC---CeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEeCCC-C--eEEEEeCC
Q 044903 244 EAIDAVG--WKGKLCLVNVKG---AEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENS-C--TLSKYDEV 314 (387)
Q Consensus 244 ~~~~~v~--~~g~lyv~gg~~---~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~-~--~v~~yd~~ 314 (387)
....+. -+|+..+++... ..+.++|+.+.+...+.... ....++ ..+|+..+++..+ + .|++||.+
T Consensus 312 -~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 312 -QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp -EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred -cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 111222 356544443332 57899999988877665321 112223 2345544444333 3 69999998
Q ss_pred CCceEEcc
Q 044903 315 MDDWKEVV 322 (387)
Q Consensus 315 ~~~W~~v~ 322 (387)
++....+.
T Consensus 387 g~~~~~l~ 394 (415)
T 2hqs_A 387 GRFKARLP 394 (415)
T ss_dssp SCCEEECC
T ss_pred CCcEEEee
Confidence 77666554
No 204
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.79 E-value=1.6 Score=42.53 Aligned_cols=268 Identities=10% Similarity=-0.048 Sum_probs=127.9
Q ss_pred CCChHHHHHHHhhhcC-------hhhHHHhhHhhhhhcc------CCCC--CCcceEEEeecCCCCCCCCCeEEEEEeCC
Q 044903 44 PGLPDHIAHLCLSHVH-------PSILHNVCHSWRRLIY------SPSF--PPFLSLYALFSPKSNSSSTPIHLFTFDPV 108 (387)
Q Consensus 44 ~~LP~dl~~~iL~rLP-------~~~~r~Vck~W~~li~------s~~f--~~~~~l~~~~~~~~~~~~~~~~~~~~d~~ 108 (387)
..|.++=+..|.+.|- ...+..+.+.|..+.. .+.+ .+--.+|+... ....+.++|..
T Consensus 95 ~~ls~~ei~~l~~yl~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~p~~~~~vs~~-------~d~~V~v~D~~ 167 (543)
T 1nir_A 95 GELSKEQITLMAKYIQHTPPQPPEWGMPEMRESWKVLVKPEDRPKKQLNDLDLPNLFSVTLR-------DAGQIALVDGD 167 (543)
T ss_dssp TSSCHHHHHHHHHHTTSCCCBCCCCCHHHHHHHCEESSCGGGSCSSCCSCCCGGGEEEEEEG-------GGTEEEEEETT
T ss_pred cCCCHHHHHHHHHHHHhcccCCCccchhhhhhhhccccccccCCcccccccCCCCEEEEEEc-------CCCeEEEEECC
Confidence 4577777777766654 2234456666665541 1111 11123444432 23456778887
Q ss_pred CCCcccCCCCCCCCCccccccCCCccccccceeEEE-eCC-EEEEEcCccCCCCCCCCccEEEeC--CCCceeeCCCCCC
Q 044903 109 SSTWDPLPPPPPDPPLHLILHHPSFLSRNLPVQLVS-LSG-KLILLAATTHNFNPALTRPLIFDP--ICRTWTFGPELVT 184 (387)
Q Consensus 109 ~~~W~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~v~GG~~~~~~~~~~~~~vydp--~t~~W~~l~~~~~ 184 (387)
+.+-.. .++.. ...+.++. -++ .+|+.+. . +.+.+||. .|.+-.. .++.
T Consensus 168 t~~~~~--~i~~g---------------~~~~~v~~spdg~~l~v~~~-----d---~~V~v~D~~~~t~~~~~--~i~~ 220 (543)
T 1nir_A 168 SKKIVK--VIDTG---------------YAVHISRMSASGRYLLVIGR-----D---ARIDMIDLWAKEPTKVA--EIKI 220 (543)
T ss_dssp TCCEEE--EEECS---------------TTEEEEEECTTSCEEEEEET-----T---SEEEEEETTSSSCEEEE--EEEC
T ss_pred CceEEE--EEecC---------------cccceEEECCCCCEEEEECC-----C---CeEEEEECcCCCCcEEE--EEec
Confidence 764321 11110 00133333 344 4555542 1 57899999 6654322 2222
Q ss_pred CceeeeEEee-----CC-EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCC--CC--ccccc-ceeEEEE--
Q 044903 185 PRRWCAAGYS-----RG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELK--DG--RFSRE-AIDAVGW-- 251 (387)
Q Consensus 185 ~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~--~~--~~~~~-~~~~v~~-- 251 (387)
...-...+.. ++ .+|+.+-.. ..+.++|..+.++ -..++... .. .+... ...++..
T Consensus 221 g~~p~~va~sp~~~~dg~~l~v~~~~~--------~~v~v~D~~t~~~---~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 221 GIEARSVESSKFKGYEDRYTIAGAYWP--------PQFAIMDGETLEP---KQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEES--------SEEEEEETTTCCE---EEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred CCCcceEEeCCCcCCCCCEEEEEEccC--------CeEEEEecccccc---ceeecccCcccCccccccCCceEEEEECC
Confidence 2222222222 34 566654322 3678889887762 11221100 00 00000 0122222
Q ss_pred -CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCe-EEEEeCCCCeEEEEeCCCCceEEccc---cc
Q 044903 252 -KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEV-LYGIDENSCTLSKYDEVMDDWKEVVK---SD 325 (387)
Q Consensus 252 -~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~-ly~~g~~~~~v~~yd~~~~~W~~v~~---~~ 325 (387)
++.+|+.......+.++|..+..-..+.. +..+..-..++ --+|+ +|+....++.|.+||.++.+-..... .|
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~-i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p 368 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNLTVTS-IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP 368 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSCEEEE-EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcceeEE-eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCC
Confidence 34555554444789999987643211111 11111111222 22444 66665567889999999886544322 12
Q ss_pred cccCceeEEEe-CCeEEEEec-CCceEEEEEecC
Q 044903 326 LLKGARHAAAG-GGRVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 326 ~~~~~~~~~~~-~~~l~v~gg-~~~~i~v~d~~~ 357 (387)
........+.- ++.+|+.+. ++..|.+||..+
T Consensus 369 h~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 369 HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 22122222222 478888865 458899999985
No 205
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.74 E-value=1.9 Score=43.19 Aligned_cols=61 Identities=18% Similarity=0.211 Sum_probs=37.9
Q ss_pred CeEEEEeCCCC--ceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeEEcCCCC
Q 044903 306 CTLSKYDEVMD--DWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDTPLG 371 (387)
Q Consensus 306 ~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~~~~~~ 371 (387)
+.|..+|+++. .|+.-...+... ......+.++++|..++.+.++|..++ -.+|++.++.+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~~---g~~~~~g~~v~~g~~dg~l~a~D~~tG--~~lw~~~~~~~ 519 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWNG---GTLTTAGNVVFQGTADGRLVAYHAATG--EKLWEAPTGTG 519 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCC---CEEEETTTEEEEECTTSEEEEEETTTC--CEEEEEECSSC
T ss_pred cEEEEEeCCCCcEEeecCCCCCCcC---cceEeCCCEEEEECCCCcEEEEECCCC--ceeeeeeCCCC
Confidence 56999999875 577633222221 223344444555667889999998843 35788866654
No 206
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.71 E-value=1.1 Score=40.23 Aligned_cols=179 Identities=9% Similarity=0.021 Sum_probs=88.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++..++.|+.+ ..+.+||..+.+-.............+.+. -++.+++.|+.+. .+.+||..+.
T Consensus 138 ~~~~l~s~s~d-------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg--------~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNR-------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDG--------ILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETT-------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTS--------CEEEEESSCT
T ss_pred CCCEEEEEeCC-------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCC--------EEEEEECCCC
Confidence 45566666532 357889988776543221111111112222 2567777776543 7899999887
Q ss_pred ccccCeE--EcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCce-eeccccc-c-CCCCCcEEEEe-CC
Q 044903 225 EKNSRWE--KTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTW-DDMREGM-V-RGWRGPVAAMD-EE 296 (387)
Q Consensus 225 ~~~~~W~--~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~-~-~~~~~~~~~~~-~g 296 (387)
+ -. .+..-.. .....+.+ +|...+.++. ..+.+||+.+..= ..+.... . ......+++.. ++
T Consensus 203 ~----~~~~~~~~~h~-----~~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 203 D----QASSRFPVDEE-----AKIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp T----SCCEECCCCTT-----SCEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred C----CCccEEeccCC-----CCEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 6 22 2221011 11223333 5666666664 4899999976532 1111100 0 00001123332 45
Q ss_pred eEEEEeCC-CCeEEEEeC--CCCceEEc----ccccc---ccCceeEEEeCCeEEEEecCCce
Q 044903 297 VLYGIDEN-SCTLSKYDE--VMDDWKEV----VKSDL---LKGARHAAAGGGRVCAVCENGGG 349 (387)
Q Consensus 297 ~ly~~g~~-~~~v~~yd~--~~~~W~~v----~~~~~---~~~~~~~~~~~~~l~v~gg~~~~ 349 (387)
+..+.++. ++.+.+|+. ..+.|... ....+ ......+...++.+.++-..+..
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAILKTNDS 335 (343)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEEECSSE
T ss_pred CEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEEecCCe
Confidence 55555443 777888876 55679871 11111 11134445567777766544433
No 207
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=95.71 E-value=0.0082 Score=55.72 Aligned_cols=185 Identities=12% Similarity=0.049 Sum_probs=79.7
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCC--ceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICR--TWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~--~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.+|+.+. + ..++.+|..|. .|+.-. . ......+..++++|+.++.+. .+.++|..
T Consensus 8 ~~~~v~~gs~-d-------g~v~a~d~~tG~~~W~~~~--~--~~~s~p~~~~g~~~v~~s~dg--------~l~a~d~~ 67 (369)
T 2hz6_A 8 PETLLFVSTL-D-------GSLHAVSKRTGSIKWTLKE--D--PVLQVPTHVEEPAFLPDPNDG--------SLYTLGSK 67 (369)
T ss_dssp CTTEEEEEET-T-------SEEEEEETTTCCEEEEEEC--C--CSCCCC-----CCEEECTTTC--------CEEEC---
T ss_pred eCCEEEEEcC-C-------CEEEEEECCCCCEEEEecC--C--CceecceEcCCCEEEEeCCCC--------EEEEEECC
Confidence 4556665432 1 35788898877 466532 1 111223345667777764332 57888987
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCC--ceeeccccccCCCCCcEEEEeCCeEEE
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVAN--TWDDMREGMVRGWRGPVAAMDEEVLYG 300 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~~~~~~~~~~g~ly~ 300 (387)
+++.. |+.....+... ....++..++.+|+ |.....+.++|++++ .|+.-..... ..+..++.||+
T Consensus 68 tG~~~--w~~~~~~~~~~---~~sp~~~~~~~v~~-g~~dg~v~a~D~~tG~~~w~~~~~~~~------~~~p~~~~v~~ 135 (369)
T 2hz6_A 68 NNEGL--TKLPFTIPELV---QASPCRSSDGILYM-GKKQDIWYVIDLLTGEKQQTLSSAFAD------SLSPSTSLLYL 135 (369)
T ss_dssp --CCS--EECSCCHHHHH---TTCSCC-----CCC-CEEEEEEEEECCC----------------------------EEE
T ss_pred CCcee--eeeeccCcccc---ccCceEecCCEEEE-EeCCCEEEEEECCCCcEEEEecCCCcc------cccccCCEEEE
Confidence 77644 65422111100 00111124666664 333347889999865 5765332111 11114566665
Q ss_pred EeCCCCeEEEEeCCCC--ceEEccccccccCceeEE---EeCCeEEEEecCCceEEEEEecCCCCCceeEEcC
Q 044903 301 IDENSCTLSKYDEVMD--DWKEVVKSDLLKGARHAA---AGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDT 368 (387)
Q Consensus 301 ~g~~~~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~---~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~~~ 368 (387)
. ..++.++.||+++. .|+.-... . ....+. ..++.+|+. ..++.++.+|..++ ...|+...
T Consensus 136 ~-~~dg~v~a~d~~tG~~~W~~~~~~--~-~~~~~~~~~~~~~~v~~~-~~dg~v~a~d~~tG--~~~W~~~~ 201 (369)
T 2hz6_A 136 G-RTEYTITMYDTKTRELRWNATYFD--Y-AASLPEDDVDYKMSHFVS-NGDGLVVTVDSESG--DVLWIQNY 201 (369)
T ss_dssp E-EEEEEEECCCSSSSSCCCEEEEEE--E-CCBCCCCCTTCCCCEEEE-ETSCEEEEECTTTC--CEEEEEEC
T ss_pred E-ecCCEEEEEECCCCCEEEeEeccc--c-cCccccCCccccceEEEE-CCCCEEEEEECCCC--cEEEEecC
Confidence 4 34678999998765 48753211 0 001010 123566654 45678899998743 35688743
No 208
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.70 E-value=1.3 Score=44.10 Aligned_cols=182 Identities=11% Similarity=0.059 Sum_probs=91.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe--eCCE-EEEEecCCCCCCCCCCceEEEEeCCCC-ccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY--SRGA-VYVASGIGSQFSSDVAKSVEKWDLMNG-EKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~v~vyd~~t~-~~~~~W~~~~~~~~~ 239 (387)
..++++|..+.+-..+.............. -+++ |++.. .+. ......+.++|..+. . ...+......
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~-~~~---~~~~~~v~~~d~~~g~~----~~~~~~~~~~ 306 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE-VNR---AQNECKVNAYDAETGRF----VRTLFVETDK 306 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE-ECT---TSCEEEEEEEETTTCCE----EEEEEEEECS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE-eCC---CCCeeEEEEEECCCCce----eeEEEEccCC
Confidence 568999999988766543221111222222 2454 54433 222 122347888999888 5 5554311111
Q ss_pred ccc-ccceeEEEE--CCEEEEEeeeC--CeEEEEECCCCceeeccccccCCCCCcE-EEE--eCCeEEEEeCCCC----e
Q 044903 240 RFS-REAIDAVGW--KGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPV-AAM--DEEVLYGIDENSC----T 307 (387)
Q Consensus 240 ~~~-~~~~~~v~~--~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~-~~~--~~g~ly~~g~~~~----~ 307 (387)
... ........- +|++++.+..+ ..++.+|......+.+... .+.... .+. .++.||+.+..++ .
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~---~~~v~~~~~~spdg~~l~~~~~~~~~~~~~ 383 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG---EWEVTNFAGFDPKGTRLYFESTEASPLERH 383 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS---SSCEEEEEEECTTSSEEEEEESSSCTTCBE
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC---CeEEEeeeEEcCCCCEEEEEecCCCCceEE
Confidence 000 000112222 77866555443 5677777666666666432 111111 222 2346777765544 6
Q ss_pred EEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCC----ceEEEEEecCC
Q 044903 308 LSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENG----GGIVVVDVKAA 358 (387)
Q Consensus 308 v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~----~~i~v~d~~~~ 358 (387)
|+.+|.++...+.+...... ......-+|+.+++...+ ..++++|..++
T Consensus 384 l~~~d~~~~~~~~l~~~~~~--~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~ 436 (706)
T 2z3z_A 384 FYCIDIKGGKTKDLTPESGM--HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKG 436 (706)
T ss_dssp EEEEETTCCCCEESCCSSSE--EEEEECTTSSEEEEEEECSSCSCEEEEEESSSC
T ss_pred EEEEEcCCCCceeccCCCce--EEEEECCCCCEEEEEecCCCCCcEEEEEECCCC
Confidence 88899988776655421111 112233456655554322 45888887644
No 209
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.67 E-value=0.69 Score=43.00 Aligned_cols=149 Identities=10% Similarity=0.030 Sum_probs=77.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++.+++.|+.+ ..+.+||..+.+-...-..+.......+..+ +++.++.|+.+. .+.+||..+
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--------~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG--------IIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS--------CEEEEETTT
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC--------eEEEEEcCC
Confidence 35666666532 4678999987654331111101111122222 566667776543 688999988
Q ss_pred CccccCeEEcCCCCCCcccccceeEEE------ECCEEEEEeeeCCeEEEEECCCCceeec-cc--------cc-cC---
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVG------WKGKLCLVNVKGAEGAVYDVVANTWDDM-RE--------GM-VR--- 284 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~------~~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~--------~~-~~--- 284 (387)
.+ ....-..+... ....+. -++.+.+.|+.+..+.+||..+.+-... .. .+ +.
T Consensus 246 ~~----~~~~~~~~~~~----~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (437)
T 3gre_A 246 NV----LIRSWSFGDHA----PITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKG 317 (437)
T ss_dssp TE----EEEEEBCTTCE----EEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSS
T ss_pred cc----EEEEEecCCCC----ceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccc
Confidence 76 33221111110 011111 1344555555557789999876542111 00 00 00
Q ss_pred -----------CCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 044903 285 -----------GWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 285 -----------~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~ 317 (387)
...-.+++..++++++.++.++.|.+||..+.+
T Consensus 318 l~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 318 LEELNFCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp GGGCCCCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred cccceecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc
Confidence 000123445577788888889999999987654
No 210
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.64 E-value=1.9 Score=42.40 Aligned_cols=206 Identities=14% Similarity=0.075 Sum_probs=113.9
Q ss_pred EEEeCCEEEEEcCccCCCCCCCCccEEEeCCCCc--eeeCCCCCCC---c---eeeeEEeeCCEEEEEecCCCCCCCCCC
Q 044903 142 LVSLSGKLILLAATTHNFNPALTRPLIFDPICRT--WTFGPELVTP---R---RWCAAGYSRGAVYVASGIGSQFSSDVA 213 (387)
Q Consensus 142 ~~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~--W~~l~~~~~~---r---~~~~~~~~~~~iyv~GG~~~~~~~~~~ 213 (387)
.++.++.||+.... ..++.+|..|.+ |+.-...+.. . ...+.++.+++||+... .
T Consensus 64 P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------d 126 (582)
T 1flg_A 64 AIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------D 126 (582)
T ss_dssp CEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------T
T ss_pred cEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------C
Confidence 34578999987652 238889988774 8774332211 1 11234567889988532 1
Q ss_pred ceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECC------EEEEEee-----eCCeEEEEECCCC--ceeeccc
Q 044903 214 KSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG------KLCLVNV-----KGAEGAVYDVVAN--TWDDMRE 280 (387)
Q Consensus 214 ~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g------~lyv~gg-----~~~~i~~yD~~~~--~W~~~~~ 280 (387)
..+..+|..|++.. |+.-..-+...+.. ....++.++ .+|+-.. ....+.+||.++. .|+.-..
T Consensus 127 g~l~AlD~~TG~~~--W~~~~~~~~~~~~~-~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~ 203 (582)
T 1flg_A 127 ASVVALNKNTGKVV--WKKKFADHGAGYTM-TGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFV 203 (582)
T ss_dssp TEEEEEESSSCCEE--EEEECSCGGGTCBC-CSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESS
T ss_pred CEEEEEECCCCCEE--eeecCCCCCcCccc-ccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCC
Confidence 26889999999866 98643221111110 122344566 7766432 1357999999876 5864221
Q ss_pred ccc---------------------------------------CCCCCcEEEEeCCeEEEEeCC-----------------
Q 044903 281 GMV---------------------------------------RGWRGPVAAMDEEVLYGIDEN----------------- 304 (387)
Q Consensus 281 ~~~---------------------------------------~~~~~~~~~~~~g~ly~~g~~----------------- 304 (387)
... ..|...+.-...+.+|+-.++
T Consensus 204 ~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~ 283 (582)
T 1flg_A 204 EGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPH 283 (582)
T ss_dssp TTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCST
T ss_pred ccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCccc
Confidence 000 001111222235778876542
Q ss_pred --C----CeEEEEeCCCC--ceEEcccccc---cc--CceeEEE---eCC---eEEEEecCCceEEEEEecCCCCCceeE
Q 044903 305 --S----CTLSKYDEVMD--DWKEVVKSDL---LK--GARHAAA---GGG---RVCAVCENGGGIVVVDVKAAAAPTIFV 365 (387)
Q Consensus 305 --~----~~v~~yd~~~~--~W~~v~~~~~---~~--~~~~~~~---~~~---~l~v~gg~~~~i~v~d~~~~~~~~~W~ 365 (387)
+ +.|+.+|+++. .|+.-..... .. ....++. .+| ++++.+..++.++++|..++ ..+|+
T Consensus 284 ~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG--~~lw~ 361 (582)
T 1flg_A 284 DYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNG--KLQNA 361 (582)
T ss_dssp TCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTC--CEEEE
T ss_pred ccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCC--CEecc
Confidence 1 47999998765 5765322111 11 1222333 356 46667667889999998743 34687
Q ss_pred EcCC
Q 044903 366 VDTP 369 (387)
Q Consensus 366 ~~~~ 369 (387)
....
T Consensus 362 ~~~~ 365 (582)
T 1flg_A 362 FPFV 365 (582)
T ss_dssp EESS
T ss_pred cccc
Confidence 6443
No 211
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.62 E-value=0.54 Score=47.12 Aligned_cols=143 Identities=13% Similarity=0.157 Sum_probs=79.7
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEE-cCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEK-TGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVV 271 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~-~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~ 271 (387)
++++.+.|+.+. .+.+||..+.+ -.. +..... ...++. -++...+.++.+..+.++|..
T Consensus 441 ~g~~l~sgs~Dg--------~v~vwd~~~~~----~~~~~~~h~~------~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 441 DGQFALSGSWDG--------ELRLWDLAAGV----STRRFVGHTK------DVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSS------CEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCEEEEEeCCC--------cEEEEECCCCc----ceeEEeCCCC------CEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 566777776644 78899988775 221 111110 122222 256666667777888999876
Q ss_pred CCceeeccccccCCCC--CcEEEEe-CC--eEEEEeCCCCeEEEEeCCCCceEEccccccccCcee--EEEeCCeEEEEe
Q 044903 272 ANTWDDMREGMVRGWR--GPVAAMD-EE--VLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH--AAAGGGRVCAVC 344 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~--~~~~~~~-~g--~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~--~~~~~~~l~v~g 344 (387)
...=..+... ..+.. -.+++.. ++ .+++.++.++.|.+||..+.+-.. ....+..... ....++++++.|
T Consensus 503 ~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~--~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 503 GECKYTISEG-GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRS--TLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp SCEEEEECSS-TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEE--EECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCcceeeccC-CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEE--EEcCCCCCEEEEEEeCCCCEEEEE
Confidence 5422222110 11111 1122222 22 356666778999999998764332 2222333322 233478888888
Q ss_pred cCCceEEEEEecCC
Q 044903 345 ENGGGIVVVDVKAA 358 (387)
Q Consensus 345 g~~~~i~v~d~~~~ 358 (387)
+.++.|.+||+.+.
T Consensus 580 ~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 580 GKDGVVLLWDLAEG 593 (694)
T ss_dssp ETTSBCEEEETTTT
T ss_pred eCCCeEEEEECCCC
Confidence 88889999998754
No 212
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.57 E-value=0.7 Score=45.65 Aligned_cols=122 Identities=12% Similarity=0.116 Sum_probs=72.2
Q ss_pred eeEEeeCCEEEEEecCCCCCCCCCCceEEEEeC-CCCccccCeEEcCCCCCCcc---cc--cceeEEE--ECCE----EE
Q 044903 189 CAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDL-MNGEKNSRWEKTGELKDGRF---SR--EAIDAVG--WKGK----LC 256 (387)
Q Consensus 189 ~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~-~t~~~~~~W~~~~~~~~~~~---~~--~~~~~v~--~~g~----ly 256 (387)
.+.++.++.||+.... ...+..+|. .+++.. |+.-...+.... .. .....++ .+++ ||
T Consensus 56 ~tP~v~~g~vyv~~~~--------~~~v~AlD~~~tG~~l--W~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~ 125 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF--------PNNTFALGLDDPGTIL--WQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALIL 125 (599)
T ss_dssp SCCEEETTEEEEECST--------TTCEEEEETTCTTSEE--EEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEE
T ss_pred eccEEECCEEEEEeCC--------CCEEEEEeCCCCCcEE--EEECCCCCccccccccccccccceEEEecCCcceeEEE
Confidence 3456679999998642 125789999 888866 987654332110 00 0012234 5777 88
Q ss_pred EEeeeCCeEEEEECCCC--ceeeccccccCCC-CCcEEEEeCCeEEEEeC-----CCCeEEEEeCCCC--ceEEc
Q 044903 257 LVNVKGAEGAVYDVVAN--TWDDMREGMVRGW-RGPVAAMDEEVLYGIDE-----NSCTLSKYDEVMD--DWKEV 321 (387)
Q Consensus 257 v~gg~~~~i~~yD~~~~--~W~~~~~~~~~~~-~~~~~~~~~g~ly~~g~-----~~~~v~~yd~~~~--~W~~v 321 (387)
+... ...+.++|.++. .|+.-......+. ...+.++.+++||+-.. .++.|+.||.++. .|+.-
T Consensus 126 v~t~-dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 126 KTQL-DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EECT-TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEcC-CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 7643 347999998876 5985432111111 11223345788876542 3578999999865 48754
No 213
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=95.57 E-value=1.2 Score=39.50 Aligned_cols=182 Identities=10% Similarity=0.121 Sum_probs=96.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCC-CCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPI-CRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~-t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~ 222 (387)
.++.+|+... ...++.||+. ...|+.-.+.+. ..+.+.. ++.+|+.. .+ ..+..||+.
T Consensus 106 ~~~~l~v~t~--------~~~l~~~d~~g~~~~~~~~~~~~---~~~~~~~~~g~l~vgt-~~--------~~l~~~d~~ 165 (330)
T 3hxj_A 106 FEDILYVTSM--------DGHLYAINTDGTEKWRFKTKKAI---YATPIVSEDGTIYVGS-ND--------NYLYAINPD 165 (330)
T ss_dssp ETTEEEEECT--------TSEEEEECTTSCEEEEEECSSCC---CSCCEECTTSCEEEEC-TT--------SEEEEECTT
T ss_pred ECCEEEEEec--------CCEEEEEcCCCCEEEEEcCCCce---eeeeEEcCCCEEEEEc-CC--------CEEEEECCC
Confidence 3788887532 1357888887 335665332211 1112233 67777742 11 257888887
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCC-CceeeccccccCCCCCcEEEEe-CCeEE
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVA-NTWDDMREGMVRGWRGPVAAMD-EEVLY 299 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~-~~W~~~~~~~~~~~~~~~~~~~-~g~ly 299 (387)
++.. |....+. ... ...+. -+|.+|+.+ ..+.+||... ..|+..... . ...+++.. +|.||
T Consensus 166 -g~~~--~~~~~~~--~~~----~~~~~d~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~---~-~~~~~~~~~~g~l~ 229 (330)
T 3hxj_A 166 -GTEK--WRFKTND--AIT----SAASIGKDGTIYFGS---DKVYAINPDGTEKWNFYAGY---W-TVTRPAISEDGTIY 229 (330)
T ss_dssp -SCEE--EEEECSS--CCC----SCCEECTTCCEEEES---SSEEEECTTSCEEEEECCSS---C-CCSCCEECTTSCEE
T ss_pred -CCEe--EEEecCC--Cce----eeeEEcCCCEEEEEe---CEEEEECCCCcEEEEEccCC---c-ceeceEECCCCeEE
Confidence 4422 6654321 111 22223 377888766 5789999542 367654321 1 11223333 45788
Q ss_pred EEeCCCCeEEEEeCCCCc-eEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeEEcCC
Q 044903 300 GIDENSCTLSKYDEVMDD-WKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDTP 369 (387)
Q Consensus 300 ~~g~~~~~v~~yd~~~~~-W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~~~~ 369 (387)
+.. ..+.+++||++.+. |..-.. .... ...+..-+|.||+. ..++.++.+|.+.. ..|....+
T Consensus 230 v~t-~~~gl~~~~~~g~~~~~~~~~-~~~~-~~~~~~~~g~l~v~-t~~ggl~~~d~~g~---~~~~~~~~ 293 (330)
T 3hxj_A 230 VTS-LDGHLYAINPDGTEKWRFKTG-KRIE-SSPVIGNTDTIYFG-SYDGHLYAINPDGT---EKWNFETG 293 (330)
T ss_dssp EEE-TTTEEEEECTTSCEEEEEECS-SCCC-SCCEECTTSCEEEE-CTTCEEEEECTTSC---EEEEEECS
T ss_pred EEc-CCCeEEEECCCCCEeEEeeCC-CCcc-ccceEcCCCeEEEe-cCCCCEEEECCCCc---EEEEEEcC
Confidence 765 36789999876554 443221 1111 11223336788876 44567888886422 46776543
No 214
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.48 E-value=0.95 Score=40.68 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=80.6
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
+++||++--. ...+..+++...... .+.....+..+. ..++- .++.||+.......++++|++..
T Consensus 46 ~~~lyw~D~~--------~~~I~r~~~~g~~~~-~~~~~~~l~~p~-----glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 46 HGLIYWSDVS--------EEAIKRTEFNKTESV-QNVVVSGLLSPD-----GLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp GTEEEEEETT--------TTEEEEEETTSSSCC-CEEEEECCSCCC-----EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCEEEEEECC--------CCcEEEEEccCCCce-EEEEcCCCCCcc-----EEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 5789988432 236788887665200 022222222211 12222 47899998665678999998754
Q ss_pred ceeeccccccCCCCCc-EEEE--eCCeEEEEeC-CCCeEEEEeCCCCceEEccccccccCceeEEEe--CCeEEEEecCC
Q 044903 274 TWDDMREGMVRGWRGP-VAAM--DEEVLYGIDE-NSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCENG 347 (387)
Q Consensus 274 ~W~~~~~~~~~~~~~~-~~~~--~~g~ly~~g~-~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~~~l~v~gg~~ 347 (387)
.=+.+.. .....+ .+++ .+|.||+.+. ..+.|++++++...=+.+... ....+.+++.. +++||+.-...
T Consensus 112 ~~~~l~~---~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~-~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 112 LRKVLFW---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS-EIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp SCEEEEC---SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTT
T ss_pred cEEEEEe---CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC-CCCCccEEEEeccCCEEEEEECCC
Confidence 3232211 111122 3343 3589999983 457899999876533333211 12233344443 67888886666
Q ss_pred ceEEEEEec
Q 044903 348 GGIVVVDVK 356 (387)
Q Consensus 348 ~~i~v~d~~ 356 (387)
..|+++|..
T Consensus 188 ~~I~~~d~d 196 (318)
T 3sov_A 188 NFIHKSNLD 196 (318)
T ss_dssp TEEEEEETT
T ss_pred CEEEEEcCC
Confidence 777777776
No 215
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.46 E-value=0.94 Score=42.65 Aligned_cols=186 Identities=9% Similarity=0.002 Sum_probs=99.5
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCC-EEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++.||+.--. ..+.++|+.+++.+.+.+ ...+....+..-++ .|||+...+. .....+..++....
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~----~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNN----NDRPNNYILTRESG 215 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSC----TTSEEEEEEEGGGT
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCC----cccceEEEEeCCCc
Confidence 4678887431 678999999988877643 11222222222234 5999875322 12224556665432
Q ss_pred ccccCeE---EcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CCe-
Q 044903 225 EKNSRWE---KTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEV- 297 (387)
Q Consensus 225 ~~~~~W~---~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g~- 297 (387)
|. .++.+..+ +..++. +|.||+..-....+.+||+....-..+.......+. ..+++. +|+
T Consensus 216 -----~~~~~~l~~~~~p------~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P-~gia~~pdG~~ 283 (430)
T 3tc9_A 216 -----FKVITELTKGQNC------NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE-FHIQFHPSGNY 283 (430)
T ss_dssp -----SCSEEEEEECSSC------CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC-EEEEECTTSSE
T ss_pred -----eeeeeeeccCCCc------eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc-eeEEEcCCCCE
Confidence 33 33322222 223332 688998865557899999987654322211111111 123332 344
Q ss_pred EEEEeCCCCeEEEEeCCC--CceE---Ecccc-------------ccccCce-eEEEe---------CCeEEEEecCCce
Q 044903 298 LYGIDENSCTLSKYDEVM--DDWK---EVVKS-------------DLLKGAR-HAAAG---------GGRVCAVCENGGG 349 (387)
Q Consensus 298 ly~~g~~~~~v~~yd~~~--~~W~---~v~~~-------------~~~~~~~-~~~~~---------~~~l~v~gg~~~~ 349 (387)
||+.......|+++|.+. .... .+... ..+..+. .++.. +|.|||.-..++.
T Consensus 284 lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~ 363 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC 363 (430)
T ss_dssp EEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE
T ss_pred EEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE
Confidence 999988788899977653 2221 11111 0112233 34432 3688888666677
Q ss_pred EEEEEec
Q 044903 350 IVVVDVK 356 (387)
Q Consensus 350 i~v~d~~ 356 (387)
|..+|+.
T Consensus 364 I~~i~~~ 370 (430)
T 3tc9_A 364 IRILTPQ 370 (430)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 8888754
No 216
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.41 E-value=1.2 Score=44.87 Aligned_cols=120 Identities=14% Similarity=0.187 Sum_probs=73.3
Q ss_pred eEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccc-----ccceeEEEECCEEEEEeeeCCe
Q 044903 190 AAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS-----REAIDAVGWKGKLCLVNVKGAE 264 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~-----~~~~~~v~~~g~lyv~gg~~~~ 264 (387)
+.++.+++||+.... ..+..+|..|++.. |+.-...+..... ......++.+++||+.+. ...
T Consensus 65 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~--W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-dg~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF---------SVVYALDARDGRLI--WKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-DGR 132 (689)
T ss_dssp CCEEETTEEEEECGG---------GCEEEEETTTCCEE--EEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSE
T ss_pred cCEEECCEEEEEcCC---------CeEEEEECCCCcee--EEEcCCCCccccccccccCCCCccEEECCEEEEEcc-CCE
Confidence 345679999997542 25889999998866 9875533311100 001223567899987643 358
Q ss_pred EEEEECCCC--ceeeccc-cccCCC-CCcEEEEeCCeEEEEeC-----CCCeEEEEeCCCCc--eEEc
Q 044903 265 GAVYDVVAN--TWDDMRE-GMVRGW-RGPVAAMDEEVLYGIDE-----NSCTLSKYDEVMDD--WKEV 321 (387)
Q Consensus 265 i~~yD~~~~--~W~~~~~-~~~~~~-~~~~~~~~~g~ly~~g~-----~~~~v~~yd~~~~~--W~~v 321 (387)
+.++|.+++ .|+.... ...... ...+.++.++.+|+-.. .++.|+.||.++.+ |+.-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999999876 5886532 111111 11233456888887532 24689999998764 8753
No 217
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.41 E-value=0.93 Score=42.77 Aligned_cols=187 Identities=11% Similarity=-0.014 Sum_probs=100.3
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCcc
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~ 226 (387)
+.||+.-.. ..+.++|+.+++.+.+.. ...+....+..-+++|||+..... .....+..++.....
T Consensus 153 g~Lyv~D~~--------~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~----~~~~gv~~~~~~~~~- 218 (433)
T 4hw6_A 153 DDLYWVGQR--------DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSS----DTNTGIYLFTRASGF- 218 (433)
T ss_dssp CEEEEECBT--------SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSC----TTSEEEEEECGGGTT-
T ss_pred CEEEEEeCC--------CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCC----cccceEEEEECCCCe-
Confidence 789887431 678999999988877644 222222223333556999864321 112234555543321
Q ss_pred ccCe-EEcCCCCCCcccccceeEEE-E-CCEEEEEeeeCCeEEEEECCCCce-eeccccccCCCCCcEEEEe--CCeEEE
Q 044903 227 NSRW-EKTGELKDGRFSREAIDAVG-W-KGKLCLVNVKGAEGAVYDVVANTW-DDMREGMVRGWRGPVAAMD--EEVLYG 300 (387)
Q Consensus 227 ~~~W-~~~~~~~~~~~~~~~~~~v~-~-~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~~~~~~~~~~~~~~~--~g~ly~ 300 (387)
.+ ..++.+..+ ...++ - +|.||+.......+..||+.+.+- ..+.......+ ...+++. ++.||+
T Consensus 219 --~~~~~~~~~~~P------~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~-~~~ia~dpdG~~LYv 289 (433)
T 4hw6_A 219 --TERLSLCNARGA------KTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGS-NFHIVWHPTGDWAYI 289 (433)
T ss_dssp --CCEEEEEECSSB------CCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSS-CEEEEECTTSSEEEE
T ss_pred --eccccccccCCC------CEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCC-cccEEEeCCCCEEEE
Confidence 01 122222111 22222 2 688998865556899999986654 22211111111 1124432 345999
Q ss_pred EeCCCCeEEEEeCC--CCceE---Ec-ccc------------ccccCceeEEE----------eCCeEEEEecCCceEEE
Q 044903 301 IDENSCTLSKYDEV--MDDWK---EV-VKS------------DLLKGARHAAA----------GGGRVCAVCENGGGIVV 352 (387)
Q Consensus 301 ~g~~~~~v~~yd~~--~~~W~---~v-~~~------------~~~~~~~~~~~----------~~~~l~v~gg~~~~i~v 352 (387)
.......|+++|.+ +.... .+ ... ..+..+..++. .+|.|||.-..++.|..
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 98777889997754 33321 11 110 01122344444 56789998767788888
Q ss_pred EEec
Q 044903 353 VDVK 356 (387)
Q Consensus 353 ~d~~ 356 (387)
+|+.
T Consensus 370 ~~~~ 373 (433)
T 4hw6_A 370 LTPE 373 (433)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8864
No 218
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.40 E-value=1.4 Score=39.53 Aligned_cols=182 Identities=11% Similarity=0.030 Sum_probs=90.9
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEE-eCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKW-DLM 222 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vy-d~~ 222 (387)
-++.+|+.+.. ..+++-+-.-.+|+++.... ....+..+.. ++.+|++|..+. +..- |..
T Consensus 131 ~~~~~~~~~~~--------g~v~~S~DgG~tW~~~~~~~-~~~~~~~~~~~~~~~~~~g~~G~---------~~~S~d~g 192 (327)
T 2xbg_A 131 GNGSAEMITNV--------GAIYRTKDSGKNWQALVQEA-IGVMRNLNRSPSGEYVAVSSRGS---------FYSTWEPG 192 (327)
T ss_dssp ETTEEEEEETT--------CCEEEESSTTSSEEEEECSC-CCCEEEEEECTTSCEEEEETTSS---------EEEEECTT
T ss_pred CCCCEEEEeCC--------ccEEEEcCCCCCCEEeecCC-CcceEEEEEcCCCcEEEEECCCc---------EEEEeCCC
Confidence 46777776641 12344333456899875322 2223333333 456666553221 2221 222
Q ss_pred CCccccCeEEcCCCCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECC-CCceeecccc-ccCCCCCcEEEEe-CCeE
Q 044903 223 NGEKNSRWEKTGELKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVV-ANTWDDMREG-MVRGWRGPVAAMD-EEVL 298 (387)
Q Consensus 223 t~~~~~~W~~~~~~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~-~~~~~~~~~~~~~-~g~l 298 (387)
-.+ |..+...... .....+. -++.+|+.+..+ .+...+.. -.+|+.+... ++.......++.. ++.+
T Consensus 193 G~t----W~~~~~~~~~----~~~~~~~~~~g~~~~~~~~G-~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 193 QTA----WEPHNRTTSR----RLHNMGFTPDGRLWMIVNGG-KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp CSS----CEEEECCSSS----CEEEEEECTTSCEEEEETTT-EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred CCc----eeECCCCCCC----ccceeEECCCCCEEEEeCCc-eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 345 9988532211 1122222 357788775433 34444333 4589987642 2222111233332 5688
Q ss_pred EEEeCCCCeEEEEeCCCCceEEcccc-ccccCceeEEE-eCCeEEEEecCCceEEEEEe
Q 044903 299 YGIDENSCTLSKYDEVMDDWKEVVKS-DLLKGARHAAA-GGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 299 y~~g~~~~~v~~yd~~~~~W~~v~~~-~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~ 355 (387)
|+.+. .+.+++-.-...+|+.+... +.....+.++. -++.++++ |.++.++.++.
T Consensus 264 ~~~g~-~g~i~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~~~~ 320 (327)
T 2xbg_A 264 WLAGG-AGALLCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFIL-GQKGILLRYVT 320 (327)
T ss_dssp EEEES-TTCEEEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEE-CSTTEEEEECC
T ss_pred EEEeC-CCeEEEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEE-cCCceEEEEcC
Confidence 88875 56665544456899998743 22222233333 45666666 55566776665
No 219
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=95.39 E-value=0.29 Score=47.46 Aligned_cols=136 Identities=7% Similarity=0.016 Sum_probs=74.6
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++.++.++.+. .+.+||..... -..+.....+ ..++. -++++.+.++.+..+.+||...
T Consensus 437 d~~~l~~~~~d~--------~v~~w~~~~~~----~~~~~~~~~~------v~~~~~spd~~~las~~~d~~i~iw~~~~ 498 (577)
T 2ymu_A 437 DDQTIASASDDK--------TVKLWNRNGQL----LQTLTGHSSS------VRGVAFSPDGQTIASASDDKTVKLWNRNG 498 (577)
T ss_dssp TSSEEEEEETTS--------EEEEEETTSCE----EEEEECCSSC------EEEEEECTTSCEEEEEETTSEEEEEETTS
T ss_pred CCCEEEEEcCCC--------EEEEEECCCCE----EEEEcCCCCC------EEEEEEcCCCCEEEEEeCCCEEEEEcCCC
Confidence 455666655433 67788865444 3333221111 22222 3677777777777889999654
Q ss_pred CceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEEecCCce
Q 044903 273 NTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAVCENGGG 349 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~gg~~~~ 349 (387)
+.-..+.. ....-.+++. .++++.+.++.++.|.+||...+.-.. ...+.... ..+..+|+.++.++.++.
T Consensus 499 ~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~---~~~h~~~v~~~~fs~dg~~l~s~~~D~~ 572 (577)
T 2ymu_A 499 QLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQT---LTGHSSSVWGVAFSPDGQTIASASSDKT 572 (577)
T ss_dssp CEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEE---EECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEE---EcCCCCCEEEEEEcCCCCEEEEEeCCCE
Confidence 33222221 0101112222 356666777788999999976543332 22222222 233457787788777888
Q ss_pred EEEEE
Q 044903 350 IVVVD 354 (387)
Q Consensus 350 i~v~d 354 (387)
|.+||
T Consensus 573 i~~Wd 577 (577)
T 2ymu_A 573 VKLWN 577 (577)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88886
No 220
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=95.33 E-value=0.71 Score=42.94 Aligned_cols=148 Identities=11% Similarity=0.023 Sum_probs=82.7
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.+++.|+.+. .+.+||..+.+ -...-..+. ......++.+ ++.+.+.|+....+.+||+.+
T Consensus 181 ~~~~l~~~~~d~--------~i~iwd~~~~~----~~~~~~~~~---h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNLS--------RVIIFDIRTLE----RLQIIENSP---RHGAVSSICIDEECCVLILGTTRGIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETTS--------EEEEEETTTCC----EEEEEECCG---GGCCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEEeCCC--------eEEEEeCCCCe----eeEEEccCC---CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC
Confidence 366677766543 78999998876 221111100 0011333333 677777777778899999987
Q ss_pred CceeeccccccCCCCCcEEEE-----eCCeEEEEeCCCCeEEEEeCCCCceEEccc-c----------cc----------
Q 044903 273 NTWDDMREGMVRGWRGPVAAM-----DEEVLYGIDENSCTLSKYDEVMDDWKEVVK-S----------DL---------- 326 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~-----~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~-~----------~~---------- 326 (387)
.+....-. ......-.+++. .++.+.+.++.++.|.+||..+.+-..... . |.
T Consensus 246 ~~~~~~~~-~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 246 NVLIRSWS-FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp TEEEEEEB-CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred ccEEEEEe-cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 65432110 000000011211 135567777778899999998664222111 0 00
Q ss_pred ---ccC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 327 ---LKG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 327 ---~~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
... -.++...++++++.|+.++.|.+||+.+.
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCG
T ss_pred ccccCCceEEEEECCceEEEecCCCCeEEEEECCCc
Confidence 000 12334448888888888899999999854
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=95.32 E-value=1 Score=39.80 Aligned_cols=183 Identities=13% Similarity=0.035 Sum_probs=92.0
Q ss_pred CEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCcc
Q 044903 147 GKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEK 226 (387)
Q Consensus 147 ~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~ 226 (387)
+.||+.+.. ...+++|++ +.+.+.+.. +.......+..-++++|++.... ..+..||+. ++
T Consensus 57 ~~l~~~d~~-------~~~i~~~~~-~g~~~~~~~-~~~~~~gl~~d~dG~l~v~~~~~--------~~v~~~~~~-g~- 117 (305)
T 3dr2_A 57 RTLVWSDLV-------GRRVLGWRE-DGTVDVLLD-ATAFTNGNAVDAQQRLVHCEHGR--------RAITRSDAD-GQ- 117 (305)
T ss_dssp TEEEEEETT-------TTEEEEEET-TSCEEEEEE-SCSCEEEEEECTTSCEEEEETTT--------TEEEEECTT-SC-
T ss_pred CEEEEEECC-------CCEEEEEeC-CCCEEEEeC-CCCccceeeECCCCCEEEEECCC--------CEEEEECCC-CC-
Confidence 447776542 246788888 444443321 11111112222357888764321 257778875 55
Q ss_pred ccCeEEcCCCCCCc-ccccceeEEEECCEEEEEe----ee-------------CCeEEEEECCCCceeeccccccCCCCC
Q 044903 227 NSRWEKTGELKDGR-FSREAIDAVGWKGKLCLVN----VK-------------GAEGAVYDVVANTWDDMREGMVRGWRG 288 (387)
Q Consensus 227 ~~~W~~~~~~~~~~-~~~~~~~~v~~~g~lyv~g----g~-------------~~~i~~yD~~~~~W~~~~~~~~~~~~~ 288 (387)
.+.+....... ...-...++.-+|.+|+.. .. ...++.||+++++.+.+. .+...
T Consensus 118 ---~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p--- 190 (305)
T 3dr2_A 118 ---AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP--- 190 (305)
T ss_dssp ---EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE---
T ss_pred ---EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC---
Confidence 55443211110 0000112223378899852 11 146889999888777654 22111
Q ss_pred cEEEEe-CC-eEEEEeCC-----CCeEEEEeCCCCceEEcccc--ccccCcee-EEEeCCeEEEEecCCceEEEEEecC
Q 044903 289 PVAAMD-EE-VLYGIDEN-----SCTLSKYDEVMDDWKEVVKS--DLLKGARH-AAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 289 ~~~~~~-~g-~ly~~g~~-----~~~v~~yd~~~~~W~~v~~~--~~~~~~~~-~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
..++.. ++ .||+.+.. .+.|++||.+.+........ ........ .+.-+|+||+.. ...+.+||++.
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~--~~gv~~~~~~g 267 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS--GTGVCVFDSDG 267 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC--SSEEEEECTTS
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec--CCcEEEECCCC
Confidence 123332 34 58888754 26899999876643221110 00111122 334567777764 44688888863
No 222
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.31 E-value=1.3 Score=38.62 Aligned_cols=136 Identities=7% Similarity=0.040 Sum_probs=72.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCcee--eeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRW--CAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
+.+.+||..|++-.++-.+...... ..+..-+++.++.|+.+. .+.+||..+++ -.........
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg--------~v~iw~~~~~~----~~~~~~~h~~-- 110 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSA--------EVQLWDVQQQK----RLRNMTSHSA-- 110 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTS--------EEEEEETTTTE----EEEEEECCSS--
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCC--------cEEEeecCCce----eEEEecCccc--
Confidence 4688999999876654332222111 112222567777777644 78889998877 3222111111
Q ss_pred cccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCC
Q 044903 242 SREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMD 316 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~ 316 (387)
.......++.+.+.++....+..++..+.......................++.++.++.++.|.+||..+.
T Consensus 111 ---~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 111 ---RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp ---CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred ---eEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 133444556665666555666777765554332211001111111122334566667777899999998764
No 223
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.25 E-value=0.48 Score=42.31 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=79.7
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++..+.|+.+. .+.+||..+++. ...+..-.. ...++.+ ++.+.+.|+.+..+.+||...
T Consensus 76 dg~~l~s~s~D~--------~v~~wd~~~~~~---~~~~~~h~~------~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~ 138 (319)
T 3frx_A 76 DGAYALSASWDK--------TLRLWDVATGET---YQRFVGHKS------DVMSVDIDKKASMIISGSRDKTIKVWTIKG 138 (319)
T ss_dssp TSSEEEEEETTS--------EEEEEETTTTEE---EEEEECCSS------CEEEEEECTTSCEEEEEETTSCEEEEETTS
T ss_pred CCCEEEEEeCCC--------EEEEEECCCCCe---eEEEccCCC------cEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 556666766544 788999988761 222221111 1222222 566777777778899999875
Q ss_pred CceeeccccccCCCCCcEEEEe-------CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce--eEEEeCCeEEEE
Q 044903 273 NTWDDMREGMVRGWRGPVAAMD-------EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR--HAAAGGGRVCAV 343 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~~~~~~-------~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~--~~~~~~~~l~v~ 343 (387)
..-..+.. ... .-..+... ++.+++.++.++.|.+||..+..-.. ......... .....+++.++.
T Consensus 139 ~~~~~~~~--h~~-~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 139 QCLATLLG--HND-WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp CEEEEECC--CSS-CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEE
T ss_pred CeEEEEec--cCC-cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEE
Confidence 43332221 000 00111111 23456666778999999997653222 222222222 223347888888
Q ss_pred ecCCceEEEEEecCC
Q 044903 344 CENGGGIVVVDVKAA 358 (387)
Q Consensus 344 gg~~~~i~v~d~~~~ 358 (387)
|+.++.+.+||..+.
T Consensus 214 ~~~dg~i~iwd~~~~ 228 (319)
T 3frx_A 214 AGKDGEIMLWNLAAK 228 (319)
T ss_dssp EETTCEEEEEETTTT
T ss_pred EeCCCeEEEEECCCC
Confidence 888899999998754
No 224
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.22 E-value=2.7 Score=41.66 Aligned_cols=142 Identities=11% Similarity=0.004 Sum_probs=85.2
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
+++||+..... ..+..+++.... .+.+........ ...++ .+++||+.......|+++|++.
T Consensus 48 ~~~lywtD~~~--------~~I~r~~~~g~~----~~~v~~~g~~~P----~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 48 DNRIYWTDISL--------KTISRAFMNGSA----LEHVVEFGLDYP----EGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp TTEEEEEETTT--------TEEEEEETTSCS----CEEEECSSCSCC----CEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEECCC--------CeEEEEECCCCC----cEEEEeCCCCCc----ceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 68999985432 367788877655 554432221110 22222 4689999876668899999875
Q ss_pred CceeeccccccCCCCCc-EEEEe--CCeEEEEe-CCCCeEEEEeCCCCceEEccccccccCceeEEEe--CCeEEEEecC
Q 044903 273 NTWDDMREGMVRGWRGP-VAAMD--EEVLYGID-ENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAG--GGRVCAVCEN 346 (387)
Q Consensus 273 ~~W~~~~~~~~~~~~~~-~~~~~--~g~ly~~g-~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~--~~~l~v~gg~ 346 (387)
..=+.+.. .....+ .+++. +|.||+.+ +....|++.+++...-+.+.. ....+.+++.- +++||+.-..
T Consensus 112 ~~~~~l~~---~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 112 QHRQVLVW---KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--NVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp TTCEEEEC---SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--SCSSEEEEEEETTTTEEEEEETT
T ss_pred CcEEEEEe---CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--CCCCcceEEEccccCEEEEEECC
Confidence 43222211 111122 34444 68999998 446789999998776555432 22333444443 6788888666
Q ss_pred CceEEEEEecC
Q 044903 347 GGGIVVVDVKA 357 (387)
Q Consensus 347 ~~~i~v~d~~~ 357 (387)
...|.++|...
T Consensus 187 ~~~I~~~d~dG 197 (628)
T 4a0p_A 187 TNLIESSNMLG 197 (628)
T ss_dssp TTEEEEEETTS
T ss_pred CCEEEEEcCCC
Confidence 67788888763
No 225
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.19 E-value=0.68 Score=40.91 Aligned_cols=134 Identities=14% Similarity=0.051 Sum_probs=67.0
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECC-EEEEEeeeCCeEEEEECCCCceee-ccccccC--CCCCcE
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDVVANTWDD-MREGMVR--GWRGPV 290 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g-~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~--~~~~~~ 290 (387)
.+.++|..+.+ -...-.++..... ....+..-+| .+|+.+.....+.++|+.+.+-.. +...... +.....
T Consensus 12 ~v~~~d~~~~~----~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 86 (337)
T 1pby_B 12 KLVVIDTEKMA----VDKVITIADAGPT-PMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFG 86 (337)
T ss_dssp EEEEEETTTTE----EEEEEECTTCTTC-CCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTC
T ss_pred eEEEEECCCCc----EEEEEEcCCCCCC-ccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccc
Confidence 68889988876 3322222220000 0012222355 677776555789999998765432 2211100 001112
Q ss_pred EEEe-CC-eEEEEeC-----------CCCeEEEEeCCCCceEEccccccccCceeE-EEeCCe-EEEEecCCceEEEEEe
Q 044903 291 AAMD-EE-VLYGIDE-----------NSCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGGR-VCAVCENGGGIVVVDV 355 (387)
Q Consensus 291 ~~~~-~g-~ly~~g~-----------~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~~-l~v~gg~~~~i~v~d~ 355 (387)
++.. +| .||+... .++.|.+||.++.+.......+ .....+ ..-+|+ ||+. +..+.++|+
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~---~~~i~~~d~ 161 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGL---GRDLHVMDP 161 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEE---SSSEEEEET
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEe---CCeEEEEEC
Confidence 3332 34 6777641 3578999999887654332221 112222 233454 5544 456888887
Q ss_pred cCC
Q 044903 356 KAA 358 (387)
Q Consensus 356 ~~~ 358 (387)
.+.
T Consensus 162 ~~~ 164 (337)
T 1pby_B 162 EAG 164 (337)
T ss_dssp TTT
T ss_pred CCC
Confidence 643
No 226
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.19 E-value=2.9 Score=41.78 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=39.0
Q ss_pred CeEEEEeCCCC--ceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeEEcCCCCc
Q 044903 306 CTLSKYDEVMD--DWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVDTPLGF 372 (387)
Q Consensus 306 ~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~~~~~~~ 372 (387)
+.|..+|+.+. .|+.-...+.. ...++..++.||+ |..+..+.++|..++ ...|+...+.+.
T Consensus 438 g~l~A~D~~tG~~~W~~~~~~~~~--~~~~~t~gg~vf~-g~~dg~l~a~d~~tG--~~l~~~~~~~~~ 501 (668)
T 1kv9_A 438 GALLAWDPVKQKAAWKVPYPTHWN--GGTLSTAGNLVFQ-GTAAGQMHAYSADKG--EALWQFEAQSGI 501 (668)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC--CCEEEETTTEEEE-ECTTSEEEEEETTTC--CEEEEEECSSCC
T ss_pred ceEEEEeCCCCcEEEEccCCCCCc--CceeEeCCCEEEE-ECCcccchhhhhhcC--hhheEecCCCCc
Confidence 66999999876 48763322221 2234444555554 566789999998843 467888666543
No 227
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.10 E-value=1.8 Score=42.35 Aligned_cols=186 Identities=12% Similarity=-0.034 Sum_probs=92.4
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCCCCCCCCceEEEEeCC-
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQFSSDVAKSVEKWDLM- 222 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~vyd~~- 222 (387)
++.+|+... ..+.+.++|+.|++-... ++....-+..+.. +..+||.+. + ..+.+||+.
T Consensus 166 ~~~~~V~~~-------~~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~~-d--------g~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLR-------DAGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIGR-D--------GKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEET-------TTTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEET-T--------SEEEEEETTS
T ss_pred CceEEEEeC-------CCCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEcC-C--------CeEEEEECCC
Confidence 455666543 235789999998865431 1222221222222 446787642 1 268999985
Q ss_pred -CCccccCeEEcCCCCCCcccccceeEEEE-----CC-EEEEEeeeCCeEEEEECCCCcee-eccc-ccc-CC-----C-
Q 044903 223 -NGEKNSRWEKTGELKDGRFSREAIDAVGW-----KG-KLCLVNVKGAEGAVYDVVANTWD-DMRE-GMV-RG-----W- 286 (387)
Q Consensus 223 -t~~~~~~W~~~~~~~~~~~~~~~~~~v~~-----~g-~lyv~gg~~~~i~~yD~~~~~W~-~~~~-~~~-~~-----~- 286 (387)
+.+ .+..++....+ ...+.- +| .+|+.+.....+.++|..+.+=. .++. ++. .+ .
T Consensus 228 ~t~~------~v~~i~~G~~P---~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~ 298 (567)
T 1qks_A 228 KEPT------TVAEIKIGSEA---RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEP 298 (567)
T ss_dssp SSCC------EEEEEECCSEE---EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCC
T ss_pred CCCc------EeEEEecCCCC---ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCC
Confidence 443 22223222111 223333 55 68888777788999997664321 1221 111 00 0
Q ss_pred CCcEEE-EeCCe-EEEEeCCCCeEEEEeCCCCceEEccccccccCcee-EEEeCCe-EEEEecCCceEEEEEecCC
Q 044903 287 RGPVAA-MDEEV-LYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH-AAAGGGR-VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 287 ~~~~~~-~~~g~-ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~-~~~~~~~-l~v~gg~~~~i~v~d~~~~ 358 (387)
+...++ ..++. .++.-...+.|++.|........+...+..+..+. ....+|+ +|+....++.+.|+|..+.
T Consensus 299 rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~ 374 (567)
T 1qks_A 299 RVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG 374 (567)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT
T ss_pred ceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 101111 22233 33333567889999987765544443332222222 2223444 4444444677777777743
No 228
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.05 E-value=2.1 Score=42.12 Aligned_cols=188 Identities=10% Similarity=0.026 Sum_probs=95.3
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCC--C---CCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPE--L---VTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~--~---~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~v 218 (387)
++.+++.|+.+ ..+.+||..+.+-.. +.. + .....-.+.+. -+++.++.|+.+. .+.+
T Consensus 201 dg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~--------~v~l 265 (611)
T 1nr0_A 201 DGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK--------TIKI 265 (611)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS--------EEEE
T ss_pred CCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC--------eEEE
Confidence 45555555532 356788887765433 211 0 11111111222 2566677776543 7889
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCe
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEV 297 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ 297 (387)
||..+.+ ....-...... ......+..++...+.++....+..+|+.+..-...-.+-.. .-.+++. .+++
T Consensus 266 Wd~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~--~v~~l~~spdg~ 337 (611)
T 1nr0_A 266 WNVATLK----VEKTIPVGTRI--EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK--AITALSSSADGK 337 (611)
T ss_dssp EETTTTE----EEEEEECCSSG--GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSS
T ss_pred EeCCCCc----eeeeecCCCCc--cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC--CEEEEEEeCCCC
Confidence 9998876 54332222111 111334455676666666667888899876652221111000 0112222 2566
Q ss_pred EEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEec
Q 044903 298 LYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 298 ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
..+.++.++.|.+||..+..-..+........-.++....+..++.++.+..+.++|..
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSS
T ss_pred EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecC
Confidence 66677788999999998876544321111111122222233334444556667777655
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.94 E-value=0.96 Score=40.88 Aligned_cols=200 Identities=10% Similarity=0.084 Sum_probs=99.6
Q ss_pred eeEEEe-CCEEEEEcCccCCCCCCCCccEEEeCCCCceee---CCCCC-CCcee-eeEEee--CCEEEEEecCCCCCCCC
Q 044903 140 VQLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTF---GPELV-TPRRW-CAAGYS--RGAVYVASGIGSQFSSD 211 (387)
Q Consensus 140 ~~~~~~-~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~---l~~~~-~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~ 211 (387)
+.++.. ++.||++..... ......+++||+.+++-.+ ++... .+..+ ...++. ++.+|+......
T Consensus 70 ~gv~~d~~g~L~v~D~g~~--~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~----- 142 (343)
T 2qe8_A 70 LGIKSDGNGIVWMLDNGNQ--SKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD----- 142 (343)
T ss_dssp EEEEECSSSEEEEEECHHH--HTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG-----
T ss_pred eEEEEcCCCcEEEEcCCCC--cCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC-----
Confidence 444443 578999763210 0112578999999887433 22111 11111 222333 578998853110
Q ss_pred CCceEEEEeCCCCccccCeEEcCC---C-CCC-cccc------------------cceeEEEE--CC-EEEEEeeeCCeE
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGE---L-KDG-RFSR------------------EAIDAVGW--KG-KLCLVNVKGAEG 265 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~---~-~~~-~~~~------------------~~~~~v~~--~g-~lyv~gg~~~~i 265 (387)
....+.+||+.+++ .|+.+.. + +.+ .+.. ....++.+ +| .||+....+..+
T Consensus 143 ~~~~i~v~d~~~g~---~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l 219 (343)
T 2qe8_A 143 DKAALIRVDLQTGL---AARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSM 219 (343)
T ss_dssp GGCEEEEEETTTCC---EEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEE
T ss_pred CCCeEEEEECCCCC---EEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeE
Confidence 23478899998765 2665532 1 110 0000 00112222 34 466664444566
Q ss_pred EEEECCC--C-------ceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE
Q 044903 266 AVYDVVA--N-------TWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA 335 (387)
Q Consensus 266 ~~yD~~~--~-------~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~ 335 (387)
+.+|... + .+..+...-..+. ...+++ .+|.||+.....+.|.+||+++.+...+...+.......++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~-pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~ 298 (343)
T 2qe8_A 220 YRIKSADLSNLQLTDAELGSKIERYSEKPI-CDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNF 298 (343)
T ss_dssp EEEEHHHHTCTTCCHHHHHTTCEEEEECCS-CSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEE
T ss_pred EEEEHHHhcCCCCChhhhhcceEecccCCC-CceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEE
Confidence 7776421 0 0111110000111 112332 367899998777899999995566666554443333444443
Q ss_pred -eCCeEEEEecCCceE
Q 044903 336 -GGGRVCAVCENGGGI 350 (387)
Q Consensus 336 -~~~~l~v~gg~~~~i 350 (387)
-+|++||.....+.+
T Consensus 299 ~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 299 GSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CTTSCEEEEECCGGGS
T ss_pred CCCCcEEEEeCccccc
Confidence 468899986543333
No 230
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.92 E-value=0.16 Score=51.22 Aligned_cols=169 Identities=10% Similarity=-0.034 Sum_probs=90.1
Q ss_pred ccEEEeCCCCceeeCCCC-CCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC----CccccCeEEcC--CCC
Q 044903 165 RPLIFDPICRTWTFGPEL-VTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN----GEKNSRWEKTG--ELK 237 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~-~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t----~~~~~~W~~~~--~~~ 237 (387)
.+.++++.+.....+.+. ..+. ..+....++.||++-.. ...|.++++.+ .. -..+. .+.
T Consensus 387 ~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~--------~~~I~~~~~~g~~~~~~----~~~~i~~~~~ 453 (699)
T 1n7d_A 387 EVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLS--------QRMICSTQLDRAHGVSS----YDTVISRDIQ 453 (699)
T ss_dssp C-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTT--------TTSBEEEESCCCCC-CC----CCCBCCSCC-
T ss_pred ceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecC--------CCeEEEEecCCCCCCcc----eEEEEeCCCC
Confidence 456777777766654322 2221 11122236788886332 23677788765 11 11111 111
Q ss_pred CCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeecc-ccccCCCCCcEEEE--eCCeEEEEeCCC-CeEEEE
Q 044903 238 DGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMR-EGMVRGWRGPVAAM--DEEVLYGIDENS-CTLSKY 311 (387)
Q Consensus 238 ~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~~--~~g~ly~~g~~~-~~v~~y 311 (387)
.+ ...++ .++.||+.......|.++|+....-+.+. ..+.. ...+++ .++.||+..... +.|+++
T Consensus 454 ~P------~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~---P~giavDp~~g~ly~td~~~~~~I~~~ 524 (699)
T 1n7d_A 454 AP------DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSK---PRAIVVDPVHGFMYWTDWGTPAKIKKG 524 (699)
T ss_dssp -C------CCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCC---CCCEECCSSSSCCEECCCSSSCCEEBC
T ss_pred Cc------ceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCC---cceEEEccCCCcEEEcccCCCCeEEEE
Confidence 11 11222 46889998655578999998765433332 11111 123343 367899887433 689999
Q ss_pred eCCCCceEEccccccccCceeEEE--eCCeEEEEecCCceEEEEEec
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~--~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+++...-+.+... .+..+.+++. .+++||+.-.....|.++|+.
T Consensus 525 ~~dG~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 525 GLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CSSSCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred eCCCCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 8876544333221 1222333443 367888886666778888876
No 231
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.91 E-value=2.2 Score=38.87 Aligned_cols=191 Identities=12% Similarity=-0.047 Sum_probs=98.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
-+|+++++++... ...+.++|+.+.+-......... -...+. -++++++.++. . .+.+++..+
T Consensus 143 pDg~~la~as~~~-----d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s~-~--------~~~~~~~~~ 206 (365)
T 4h5i_A 143 REGTVAAIASSKV-----PAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYITG-S--------SLEVISTVT 206 (365)
T ss_dssp TTSSCEEEEESCS-----SCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEECS-S--------CEEEEETTT
T ss_pred CCCCEEEEEECCC-----CCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEeccc-e--------eEEEEEecc
Confidence 3566555443221 14578899988765543221111 111222 24565555542 1 456777776
Q ss_pred CccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC----CeEEEEECCCCceeeccccccCCCCC--cEEE-EeCC
Q 044903 224 GEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWRG--PVAA-MDEE 296 (387)
Q Consensus 224 ~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~~--~~~~-~~~g 296 (387)
+. -............ -...+..-+|+.++.+... ..+..+|...............+... .+++ ..+|
T Consensus 207 ~~----~~~~~~~~~~~~~-v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 207 GS----CIARKTDFDKNWS-LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp CC----EEEEECCCCTTEE-EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred Cc----ceeeeecCCCCCC-EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 65 3322211111000 0012233477777766544 24566666555544332111111111 1222 2367
Q ss_pred eEEEEeCCCCeEEEEeCCCCceEEcccc-ccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 297 VLYGIDENSCTLSKYDEVMDDWKEVVKS-DLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 297 ~ly~~g~~~~~v~~yd~~~~~W~~v~~~-~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++.+.++.++.|.+||.++.+ .+... ..+.... .++..+|+.++.|+.++.|-|+|+..+
T Consensus 282 ~~lasgs~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 282 ELAVLASNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp CEEEEEETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CceEEEcCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 888888889999999998753 33222 2223332 233458899999888999999998643
No 232
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=94.90 E-value=0.84 Score=47.50 Aligned_cols=133 Identities=12% Similarity=0.014 Sum_probs=73.5
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccc-------cccCC
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMRE-------GMVRG 285 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~-------~~~~~ 285 (387)
.+.+||..+.+ -...-..+. ...++.+ ++...+.|.....+.+||..+..-..... ....+
T Consensus 80 ~v~lWd~~~~~----~~~~~~~~~------~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~ 149 (902)
T 2oaj_A 80 TVYVLSLYSQK----VLTTVFVPG------KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAA 149 (902)
T ss_dssp EEEEEETTTCS----EEEEEECSS------CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSS
T ss_pred eEEEEECCCCc----EEEEEcCCC------CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccccccccc
Confidence 78889988776 322111111 1222222 45666666666789999998765321100 00111
Q ss_pred C--CCcEEEEeC--CeEEEEeCCCCeEEEEeCCCCceEEccccc-----c-----------ccCcee--EEEeCCeEEEE
Q 044903 286 W--RGPVAAMDE--EVLYGIDENSCTLSKYDEVMDDWKEVVKSD-----L-----------LKGARH--AAAGGGRVCAV 343 (387)
Q Consensus 286 ~--~~~~~~~~~--g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~-----~-----------~~~~~~--~~~~~~~l~v~ 343 (387)
. .-.+++... +.+.+.+..++.+ +||.++.+-....... . ...... ....+|+.++.
T Consensus 150 h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 150 RLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp CCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred CCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 1 122344432 3567777788899 9999887543321110 0 012222 22347888888
Q ss_pred ecCCceEEEEEecCC
Q 044903 344 CENGGGIVVVDVKAA 358 (387)
Q Consensus 344 gg~~~~i~v~d~~~~ 358 (387)
|+.++.+.+||+.++
T Consensus 229 gs~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 229 IHEDNSLVFWDANSG 243 (902)
T ss_dssp EETTCCEEEEETTTC
T ss_pred EECCCeEEEEECCCC
Confidence 888899999998743
No 233
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.86 E-value=1.5 Score=44.42 Aligned_cols=141 Identities=9% Similarity=-0.067 Sum_probs=77.5
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.|++++|... -+..||+.+++ +..+..-.. .......++.. +|.|++-+ ...+..||+.+
T Consensus 482 ~g~lWi~~~t~~--------Gl~~~d~~~~~----~~~~~~~~~--~~~~~~~~i~~d~~g~lWigt--~~Gl~~~~~~~ 545 (758)
T 3ott_A 482 EGNVWVLLYNNK--------GIDKINPRTRE----VTKLFADEL--TGEKSPNYLLCDEDGLLWVGF--HGGVMRINPKD 545 (758)
T ss_dssp TSCEEEEETTCS--------SEEEEETTTTE----EEEECTTTS--CGGGCEEEEEECTTSCEEEEE--TTEEEEECC--
T ss_pred CCCEEEEccCCC--------CcEEEeCCCCc----eEEecCCCc--CCCcccceEEECCCCCEEEEe--cCceEEEecCC
Confidence 578998766533 36889999988 887642110 00011223333 47787643 24689999999
Q ss_pred Cceeecc-ccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceE
Q 044903 273 NTWDDMR-EGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGI 350 (387)
Q Consensus 273 ~~W~~~~-~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i 350 (387)
++++... .+++.. ...+++..+|.|++-. ...+.+||+++.+.+.... +...-..++.. -+|.||+-| ..++
T Consensus 546 ~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~l~fG~--~~Gl 619 (758)
T 3ott_A 546 ESQQSISFGSFSNN-EILSMTCVKNSIWVST--TNGLWIIDRKTMDARQQNM-TNKRFTSLLFDPKEDCVYLGG--ADGF 619 (758)
T ss_dssp CCCCBCCCCC---C-CEEEEEEETTEEEEEE--SSCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEEEEC--BSEE
T ss_pred CceEEecccCCCcc-ceEEEEECCCCEEEEC--CCCeEEEcCCCceeEEecC-CCCceeeeEEECCCCcEEEec--CCce
Confidence 8887653 122221 1223344578888875 4569999999988766432 11111122222 366766653 4567
Q ss_pred EEEEecC
Q 044903 351 VVVDVKA 357 (387)
Q Consensus 351 ~v~d~~~ 357 (387)
..+|+..
T Consensus 620 ~~f~p~~ 626 (758)
T 3ott_A 620 GISHSNL 626 (758)
T ss_dssp EEEEC--
T ss_pred EEEChhh
Confidence 7778773
No 234
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.71 E-value=3.2 Score=39.92 Aligned_cols=179 Identities=8% Similarity=0.049 Sum_probs=93.9
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCc
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGE 225 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~ 225 (387)
++..++.++.+ ..+.++|..+..-..+.....+ ....+..-+++.++.|+.+. .+.+||.....
T Consensus 314 ~~~~l~t~~~d-------~~i~~w~~~~~~~~~~~~~~~~-v~~~~~s~~g~~l~~~~~dg--------~v~~~~~~~~~ 377 (577)
T 2ymu_A 314 DGQTIASASDD-------KTVKLWNRNGQHLQTLTGHSSS-VWGVAFSPDGQTIASASDDK--------TVKLWNRNGQL 377 (577)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCSSC-EEEEEECTTSSEEEEEETTS--------EEEEEETTCCE
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeEEEeCCCCC-EEEEEECCCCCEEEEEeCCC--------EEEEEcCCCCE
Confidence 45555555532 3466778766554443322111 11112222456666665433 56778865443
Q ss_pred cccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEe
Q 044903 226 KNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGID 302 (387)
Q Consensus 226 ~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g 302 (387)
-..+...... ..++. -+|+..+.++....+.+||...+.-..+.. ... .-.+++. .+++..+.+
T Consensus 378 ----~~~~~~~~~~------v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~-~~~--~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 378 ----LQTLTGHSSS------VRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG-HSS--SVWGVAFSPDDQTIASA 444 (577)
T ss_dssp ----EEEEECCSSC------EEEEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC-CSS--CEEEEEECTTSSEEEEE
T ss_pred ----EEEecCCCCC------eEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC-CCC--CeEEEEECCCCCEEEEE
Confidence 3333211111 22222 356766777766788899865433232221 111 1112222 356677777
Q ss_pred CCCCeEEEEeCCCCceEEccccccccCc--eeEEEeCCeEEEEecCCceEEEEEec
Q 044903 303 ENSCTLSKYDEVMDDWKEVVKSDLLKGA--RHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 303 ~~~~~v~~yd~~~~~W~~v~~~~~~~~~--~~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.++.+.+||...+.-..+. ..... ..+...++++++.++.+..+.+||..
T Consensus 445 ~~d~~v~~w~~~~~~~~~~~---~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~ 497 (577)
T 2ymu_A 445 SDDKTVKLWNRNGQLLQTLT---GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 497 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEE---CCSSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred cCCCEEEEEECCCCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC
Confidence 77889999998665433322 22222 22334478888888888889999965
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=94.45 E-value=1.1 Score=40.30 Aligned_cols=139 Identities=9% Similarity=-0.059 Sum_probs=75.8
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCc
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANT 274 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~ 274 (387)
++.+|+++..+ ..+..||+.+++ ..... .+... ...+..-+|++++.. ...+..||+.+++
T Consensus 60 ~~~l~~~d~~~--------~~i~~~d~~~~~----~~~~~-~~~~v----~~i~~~~dg~l~v~~--~~gl~~~d~~~g~ 120 (326)
T 2ghs_A 60 SGTAWWFNILE--------RELHELHLASGR----KTVHA-LPFMG----SALAKISDSKQLIAS--DDGLFLRDTATGV 120 (326)
T ss_dssp TTEEEEEEGGG--------TEEEEEETTTTE----EEEEE-CSSCE----EEEEEEETTEEEEEE--TTEEEEEETTTCC
T ss_pred CCEEEEEECCC--------CEEEEEECCCCc----EEEEE-CCCcc----eEEEEeCCCeEEEEE--CCCEEEEECCCCc
Confidence 36788876442 268899998876 54432 22111 122233578888764 3468999998888
Q ss_pred eeecccccc-CCCCC-cEEE-EeCCeEEEEeCC------CCeEEEEeCCCCceEEccccccccCceeEE-EeCC-eEEEE
Q 044903 275 WDDMREGMV-RGWRG-PVAA-MDEEVLYGIDEN------SCTLSKYDEVMDDWKEVVKSDLLKGARHAA-AGGG-RVCAV 343 (387)
Q Consensus 275 W~~~~~~~~-~~~~~-~~~~-~~~g~ly~~g~~------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~-~~~~-~l~v~ 343 (387)
.+.+..... ..... ..++ -.+|++|+.... .+.|++|| +.+.+.+.. .......++ .-+| .+|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 121 LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEE
T ss_pred EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEE
Confidence 775532111 00001 1222 235678875421 35789998 455544321 111122233 2244 47777
Q ss_pred ecCCceEEEEEec
Q 044903 344 CENGGGIVVVDVK 356 (387)
Q Consensus 344 gg~~~~i~v~d~~ 356 (387)
......|+++|..
T Consensus 197 ~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 197 DTKVNRLMRVPLD 209 (326)
T ss_dssp ETTTCEEEEEEBC
T ss_pred ECCCCEEEEEEcc
Confidence 5556788888875
No 236
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.43 E-value=2.6 Score=37.70 Aligned_cols=100 Identities=7% Similarity=-0.048 Sum_probs=49.6
Q ss_pred EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCcee
Q 044903 254 KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARH 332 (387)
Q Consensus 254 ~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~ 332 (387)
.+++.++.+..+.+||.....=..+.. ... .-.+++. .+++..+.++.++.|.+||..+..-. .........-.+
T Consensus 185 ~~l~s~~~d~~i~iwd~~~~~~~~~~~--h~~-~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~-~~~~~~~~~v~~ 260 (343)
T 2xzm_R 185 PYFASVGWDGRLKVWNTNFQIRYTFKA--HES-NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP-QREFDAGSTINQ 260 (343)
T ss_dssp CEEEEEETTSEEEEEETTTEEEEEEEC--CSS-CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC-SEEEECSSCEEE
T ss_pred CEEEEEcCCCEEEEEcCCCceeEEEcC--ccc-cceEEEECCCCCEEEEEcCCCeEEEEECCCCccc-ceeecCCCcEEE
Confidence 455566666788888843321111111 000 0112222 35677777778899999998432111 011111111112
Q ss_pred E-EEeCCeEEEEecCCceEEEEEecCC
Q 044903 333 A-AAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 333 ~-~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+ ...+++++.. +.+..+.+||..+.
T Consensus 261 v~~sp~~~~la~-~~d~~v~iw~~~~~ 286 (343)
T 2xzm_R 261 IAFNPKLQWVAV-GTDQGVKIFNLMTQ 286 (343)
T ss_dssp EEECSSSCEEEE-EESSCEEEEESSSC
T ss_pred EEECCCCCEEEE-ECCCCEEEEEeCCC
Confidence 2 2335555544 55667889988743
No 237
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=94.39 E-value=2.8 Score=37.85 Aligned_cols=62 Identities=8% Similarity=-0.031 Sum_probs=41.9
Q ss_pred CCeEEEEeCCCCe-EEEEeCCCCceEEcccccc--ccCce-e-EEEeCCeEEEEecCCceEEEEEecCC
Q 044903 295 EEVLYGIDENSCT-LSKYDEVMDDWKEVVKSDL--LKGAR-H-AAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 295 ~g~ly~~g~~~~~-v~~yd~~~~~W~~v~~~~~--~~~~~-~-~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
++++.+.++.++. |.+||..+.+-. ..... ..... + ....+++.++.++.++.+.+||+...
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~--~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLV--REFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEE--EEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEE--EEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 5677777778898 999999875432 22221 22222 2 23347888888888899999999743
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=94.26 E-value=0.73 Score=40.84 Aligned_cols=168 Identities=10% Similarity=0.116 Sum_probs=83.5
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~ 242 (387)
..++.|| .+.+-.-....+... ..+.+. -++.||+.. .. +..||+ +++.. |..... ....
T Consensus 40 ~~l~~~d-~~g~~~~~~~~~~~~-~~~~~~~~~g~l~v~t----------~~-l~~~d~-~g~~~--~~~~~~--~~~~- 100 (330)
T 3hxj_A 40 KNLYAIN-TDGSVKWFFKSGEII-ECRPSIGKDGTIYFGS----------DK-VYAINP-DGTEK--WRFDTK--KAIV- 100 (330)
T ss_dssp TTTEEEC-TTSCEEESSCGGGEE-EECCEETTTTEECCSS----------CE-EEEECC-CGGGG--GGSCC--------
T ss_pred CEEEEEC-CCCcEEEEEecCCCc-ccceEEecCCcEEEec----------Cc-EEEECC-CCcEE--EEEECC--CCcc-
Confidence 3578899 665432222222111 122222 256777631 11 788887 44322 653321 1111
Q ss_pred ccceeEEEECCEEEEEeeeCCeEEEEECC-CCceeeccccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCC-ceE
Q 044903 243 REAIDAVGWKGKLCLVNVKGAEGAVYDVV-ANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMD-DWK 319 (387)
Q Consensus 243 ~~~~~~v~~~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~-~W~ 319 (387)
...+..+|.+|+.. ....+..||+. ...|+....... ..+.+.. ++.||+- ...+.++.||++.. .|.
T Consensus 101 ---~~~~~~~~~l~v~t-~~~~l~~~d~~g~~~~~~~~~~~~----~~~~~~~~~g~l~vg-t~~~~l~~~d~~g~~~~~ 171 (330)
T 3hxj_A 101 ---SDFTIFEDILYVTS-MDGHLYAINTDGTEKWRFKTKKAI----YATPIVSEDGTIYVG-SNDNYLYAINPDGTEKWR 171 (330)
T ss_dssp ---CCEEEETTEEEEEC-TTSEEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEE-CTTSEEEEECTTSCEEEE
T ss_pred ---cCceEECCEEEEEe-cCCEEEEEcCCCCEEEEEcCCCce----eeeeEEcCCCEEEEE-cCCCEEEEECCCCCEeEE
Confidence 22334489988753 23578999988 346765432111 1222333 6777764 34578999999833 355
Q ss_pred EccccccccCceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeEEc
Q 044903 320 EVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVVD 367 (387)
Q Consensus 320 ~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~~ 367 (387)
.-..... ....+...+|.||+.+ ..++.+|... ...|+..
T Consensus 172 ~~~~~~~--~~~~~~d~~g~l~v~t---~~l~~~d~~g---~~~~~~~ 211 (330)
T 3hxj_A 172 FKTNDAI--TSAASIGKDGTIYFGS---DKVYAINPDG---TEKWNFY 211 (330)
T ss_dssp EECSSCC--CSCCEECTTCCEEEES---SSEEEECTTS---CEEEEEC
T ss_pred EecCCCc--eeeeEEcCCCEEEEEe---CEEEEECCCC---cEEEEEc
Confidence 4321111 1111222466777664 6777777332 2457653
No 239
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.21 E-value=0.34 Score=43.26 Aligned_cols=106 Identities=13% Similarity=-0.002 Sum_probs=60.9
Q ss_pred ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE-eCC-eEEEEeCCCCeEEEEeCCCCceEEcccccc--
Q 044903 251 WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM-DEE-VLYGIDENSCTLSKYDEVMDDWKEVVKSDL-- 326 (387)
Q Consensus 251 ~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~-~~g-~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~-- 326 (387)
.++++|+.++....+.++|+.+++....-. .........+++ .++ .+|+.+..++.|++||+++.+-......+.
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc
Confidence 367888888777899999998876432211 111001123333 234 588887777899999998876543222211
Q ss_pred ---ccCcee-EEEeCCeEEEEecC------------CceEEEEEecC
Q 044903 327 ---LKGARH-AAAGGGRVCAVCEN------------GGGIVVVDVKA 357 (387)
Q Consensus 327 ---~~~~~~-~~~~~~~l~v~gg~------------~~~i~v~d~~~ 357 (387)
...... .+.-+|+.++++.. ...+.++|+.+
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 134 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD 134 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC
Confidence 111222 23335544444332 37899999875
No 240
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.21 E-value=2.5 Score=41.77 Aligned_cols=180 Identities=9% Similarity=-0.064 Sum_probs=92.9
Q ss_pred CccEEEeCCC------CceeeCC-CCCCCceeeeEEeeCCE-EEEEecCCCCCCCCCCceEEEEeCC-CC---ccccCeE
Q 044903 164 TRPLIFDPIC------RTWTFGP-ELVTPRRWCAAGYSRGA-VYVASGIGSQFSSDVAKSVEKWDLM-NG---EKNSRWE 231 (387)
Q Consensus 164 ~~~~vydp~t------~~W~~l~-~~~~~r~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~v~vyd~~-t~---~~~~~W~ 231 (387)
..++++|..+ .+-+.+. .-.. ........-+++ |+........ ..-....+.++|.. ++ + ..
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~-~~~~~~~i~~~d~~~~g~~~~----~~ 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPR-MPWEGTELKTARVTEDGRFAD----TR 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTC-CTTTCEEEEEEEECTTSCEEE----EE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCC-CCCCCcEEEEEEECCCCcccc----cE
Confidence 5789999988 6766665 3221 111111122444 4444322210 01123578999998 56 3 33
Q ss_pred EcCCCCCCcccccceeEEE--ECCEEEEEeeeC--CeEEEEECCCCceeeccccccC----CCC--CcEEEE-eCCeEEE
Q 044903 232 KTGELKDGRFSREAIDAVG--WKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVR----GWR--GPVAAM-DEEVLYG 300 (387)
Q Consensus 232 ~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~----~~~--~~~~~~-~~g~ly~ 300 (387)
.+..-... ...... -||++|+.+... ..++.+|+.+++++.+...... .|. ...++. .++++++
T Consensus 235 ~l~~~~~~-----~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 235 TLLGGPEE-----AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEETTB-----CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EeCCCCCc-----eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 33211000 111222 278887776544 4789999988888876532110 111 123333 3677777
Q ss_pred EeCCCCe--EEEEeCCCCceEEccccccccCc-eeE-EEeCCeEEEEecCC---ceEEEEEecCC
Q 044903 301 IDENSCT--LSKYDEVMDDWKEVVKSDLLKGA-RHA-AAGGGRVCAVCENG---GGIVVVDVKAA 358 (387)
Q Consensus 301 ~g~~~~~--v~~yd~~~~~W~~v~~~~~~~~~-~~~-~~~~~~l~v~gg~~---~~i~v~d~~~~ 358 (387)
.... +. |+.+|.++...+.+... ... ..+ ...++.++++.... ..++.+|..++
T Consensus 310 ~~~~-~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 310 VHGK-GAAVLGILDPESGELVDAAGP---WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp EEBS-SSCEEEEEETTTTEEEECCSS---CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred EEEc-CccEEEEEECCCCcEEEecCC---CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 7655 54 66668887776665432 111 122 34456666664432 35777776543
No 241
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.16 E-value=0.015 Score=57.36 Aligned_cols=32 Identities=13% Similarity=0.286 Sum_probs=27.9
Q ss_pred CCCChHHHHHHHhhhc-C---hhhHHHhhHhhhhhc
Q 044903 43 LPGLPDHIAHLCLSHV-H---PSILHNVCHSWRRLI 74 (387)
Q Consensus 43 ~~~LP~dl~~~iL~rL-P---~~~~r~Vck~W~~li 74 (387)
...||||++.+||++| | ..+++.|||+|+.+.
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~~ 48 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKID 48 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHhh
Confidence 3579999999999999 6 667789999999874
No 242
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.12 E-value=3.1 Score=42.13 Aligned_cols=177 Identities=10% Similarity=0.041 Sum_probs=95.4
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
.++.||+... .-+++||+.++++...... ......+....++.|++... .-+..||+.++
T Consensus 72 ~~g~lWigT~---------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~----------~Gl~~~~~~~~ 131 (758)
T 3ott_A 72 DNTYLYMGTD---------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL----------NGLYTYQLQSR 131 (758)
T ss_dssp TTTEEEEEET---------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET----------TEEEEEETTTC
T ss_pred CCCcEEEEeC---------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC----------CcceeEeCCCC
Confidence 3566776432 3468999999888752111 11111122334778887521 14688999888
Q ss_pred ccccCeEEcC----CCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCC---CcEEEEe-
Q 044903 225 EKNSRWEKTG----ELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWR---GPVAAMD- 294 (387)
Q Consensus 225 ~~~~~W~~~~----~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~---~~~~~~~- 294 (387)
+ ..... .++.. ....... +|.|++.. ...+..||+.+++.+........... -.++...
T Consensus 132 ~----~~~~~~~~~~l~~~-----~i~~i~~d~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 200 (758)
T 3ott_A 132 K----LTSFDTRRNGLPNN-----TIYSIIRTKDNQIYVGT--YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDT 200 (758)
T ss_dssp C----EEEECHHHHCCSCS-----CEEEEEECTTCCEEEEE--TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEET
T ss_pred e----EEEeccCCCCcCCC-----eEEEEEEcCCCCEEEEe--CCCHhhCccCCCceEEecCCCccccccceeEEEEEEC
Confidence 8 77652 12211 1222233 57787743 24688999998887654321111111 1123333
Q ss_pred -CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCeEEEEecCCceEEEEEecC
Q 044903 295 -EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 295 -~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
++.||+-. .+.++.||+++++++....++... -.+++. -+|.|+|-. ..++++||..+
T Consensus 201 ~~~~lWigt--~~Gl~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigT--~~Gl~~~~~~~ 260 (758)
T 3ott_A 201 TRQCVWIGT--EGYLFQYFPSTGQIKQTEAFHNNS-IKSLALDGNGDLLAGT--DNGLYVYHNDT 260 (758)
T ss_dssp TTTEEEEEE--EEEEEEEETTTTEEEEEEEEEEEE-EEEEEECTTCCEEEEE--TTEEEEECCTT
T ss_pred CCCEEEEEE--CCCCeEEcCCCCeEEeccCCCCCe-EEEEEEcCCCCEEEEe--CCceeEEecCC
Confidence 23467643 357999999998887654332111 122222 256677654 23566666653
No 243
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.08 E-value=2 Score=38.92 Aligned_cols=182 Identities=10% Similarity=-0.094 Sum_probs=90.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFS 242 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~ 242 (387)
..++++|..+.+.+.+..-........... -+++|++... +. .......++++|..+.+ +..+.. ..+...
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~-~~--~~~~~~~l~~~d~~~~~----~~~l~~-~~~~~~ 239 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE-GP--HDLVDARMWLVNEDGSN----VRKIKE-HAEGES 239 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC-SC--SSSCSCCCEEEETTSCC----CEESSC-CCTTEE
T ss_pred ceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEec-CC--CCCCCceEEEEECCCCc----eeEeec-cCCCcc
Confidence 467899999888776643211111111112 1233544432 11 11122478899998887 777754 111100
Q ss_pred ccceeEEEECCE-EEEEeeeC--Ce--EEEEECCCCceeeccccccCCCCCcEEEEe-CCeEEEEeC-------------
Q 044903 243 REAIDAVGWKGK-LCLVNVKG--AE--GAVYDVVANTWDDMREGMVRGWRGPVAAMD-EEVLYGIDE------------- 303 (387)
Q Consensus 243 ~~~~~~v~~~g~-lyv~gg~~--~~--i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g~ly~~g~------------- 303 (387)
....+..-+|+ |++.+... .. +.++|+.+++.+.+... + +.. ..... +|+++++..
T Consensus 240 -~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~-~~~--~~~s~~dg~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 240 -CTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-P-PCS--HLMSNFDGSLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp -EEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-C-SEE--EEEECSSSSEEEEEECCC----------
T ss_pred -ccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-C-CCC--CCccCCCCceEEEecCCcceeecccccc
Confidence 00111222555 55443322 33 89999988776655421 1 111 22233 666666532
Q ss_pred ---CCCeEEEEeCCCCceEEccccccc----------cCceeEEEeCC-eEEEEecC--CceEEEEEecCC
Q 044903 304 ---NSCTLSKYDEVMDDWKEVVKSDLL----------KGARHAAAGGG-RVCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 304 ---~~~~v~~yd~~~~~W~~v~~~~~~----------~~~~~~~~~~~-~l~v~gg~--~~~i~v~d~~~~ 358 (387)
....|++||+++...+.+...+.. .........+| .|++.+.. ...++++|....
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~ 385 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPES 385 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTT
T ss_pred ccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEccc
Confidence 235799999988876655432210 01112233455 45554432 246777787754
No 244
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=93.97 E-value=2.6 Score=36.73 Aligned_cols=134 Identities=16% Similarity=0.080 Sum_probs=75.7
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA 292 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~ 292 (387)
.+.+||..+++ -..+-.+.... ....++. -+|++.+.|+.+..+.++|.++++-...-.... . .....
T Consensus 46 tV~iWd~~tg~----~~~~~~~~~~~---~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~-~--~~~~~ 115 (318)
T 4ggc_A 46 SVYLWSASSGD----ILQLLQMEQPG---EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHS-A--RVGSL 115 (318)
T ss_dssp EEEEEETTTCC----EEEEEECCSTT---CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS-S--CEEEE
T ss_pred EEEEEECCCCC----EEEEEEecCCC---CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCcc-c--eEEEe
Confidence 67888888877 54433222111 1122233 267777777777899999998875432211111 1 11222
Q ss_pred EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 293 MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 293 ~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
...+.+.+.+...+.+..++..+.............. .......+++.++.++.++.+.+||..+.
T Consensus 116 ~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 116 SWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp EEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred ecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 3345666667677888888877654333221111111 22233456777788778888999998753
No 245
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.85 E-value=2.8 Score=35.79 Aligned_cols=173 Identities=10% Similarity=-0.063 Sum_probs=82.9
Q ss_pred CCccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC-CccccCeEEcCCCCCCcc
Q 044903 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN-GEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 163 ~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t-~~~~~~W~~~~~~~~~~~ 241 (387)
...++++|+.+++...+........ .....-+++.+++++. ..+.+||..+ .+ ...+........
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~---------~~i~~~d~~~~~~----~~~~~~~~~~~~ 86 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSE---------GLLYRLSLAGDPS----PEKVDTGFATIC 86 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEET---------TEEEEEESSSCCS----CEECCCTTCCCB
T ss_pred ceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcC---------CeEEEEeCCCCCC----ceEecccccccc
Confidence 4578999999888776543221111 1111224555555431 2689999998 77 665543221110
Q ss_pred cccceeEEEECCEEEEEeee----CCeEEEEECCCCceeeccccccCCCCCcEEEEe-CC-eEEEEeCCCCe--EEEEeC
Q 044903 242 SREAIDAVGWKGKLCLVNVK----GAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCT--LSKYDE 313 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~----~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g-~ly~~g~~~~~--v~~yd~ 313 (387)
-......-+|+..+++.. ...++.+|..+..-..+..... ...++.. ++ .|++.+..++. ++.+|.
T Consensus 87 --~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 87 --NNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP----SYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp --CSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS----EEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred --ccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC----ccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 001222235655444442 2577888887766554432111 1122222 34 45545545564 555556
Q ss_pred CCCceEEccccccccCceeEEEeCCe-EEEEecCC--ceEEEEEec
Q 044903 314 VMDDWKEVVKSDLLKGARHAAAGGGR-VCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 314 ~~~~W~~v~~~~~~~~~~~~~~~~~~-l~v~gg~~--~~i~v~d~~ 356 (387)
++.....+...+... .......+|+ |++.+..+ ..++.++..
T Consensus 161 ~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~ 205 (297)
T 2ojh_A 161 DSGVETRLTHGEGRN-DGPDYSPDGRWIYFNSSRTGQMQIWRVRVD 205 (297)
T ss_dssp TTCCEEECCCSSSCE-EEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcceEcccCCCcc-ccceECCCCCEEEEEecCCCCccEEEECCC
Confidence 666655543322111 1112233555 44443333 345555544
No 246
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.83 E-value=0.97 Score=42.58 Aligned_cols=143 Identities=12% Similarity=0.039 Sum_probs=81.7
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCE-EEEEeeeC----CeEEEEE
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGK-LCLVNVKG----AEGAVYD 269 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~-lyv~gg~~----~~i~~yD 269 (387)
++.|||+--. ..+.++|+.+++ ...+...... -.+.++.-+|. ||+..... ..+..++
T Consensus 149 ~g~Lyv~d~~---------~~I~~id~~~~~----v~~~~~~~~~----P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 149 HNHLYLVGEQ---------HPTRLIDFEKEY----VSTVYSGLSK----VRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEBT---------EEEEEEETTTTE----EEEEECCCSC----EEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCeEEEEeCC---------CcEEEEECCCCE----EEEEecCCCC----cceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 4788887321 578899999887 7666431110 01222223454 99886532 2455566
Q ss_pred CCCCceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE-eCCe-EEEEec
Q 044903 270 VVANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGGR-VCAVCE 345 (387)
Q Consensus 270 ~~~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~~-l~v~gg 345 (387)
.. ..|..... +........+++. +|.||+.....+.|++||+++..-..+...+....+..++. -+|+ ||+.-.
T Consensus 212 ~~-g~~~~~~~-l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 212 RE-SGFKVITE-LTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp GG-GTSCSEEE-EEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred CC-Cceeeeee-eccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 43 33431111 1111112233443 68899998777899999998776544433332222333443 3555 999977
Q ss_pred CCceEEEEEec
Q 044903 346 NGGGIVVVDVK 356 (387)
Q Consensus 346 ~~~~i~v~d~~ 356 (387)
..+.|+++|..
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 78899998876
No 247
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.74 E-value=1.3 Score=39.14 Aligned_cols=102 Identities=6% Similarity=-0.067 Sum_probs=58.4
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccc---cCCCCCcEEEEeCCeEEEEe----C-------------CCCeEEEE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGM---VRGWRGPVAAMDEEVLYGID----E-------------NSCTLSKY 311 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~---~~~~~~~~~~~~~g~ly~~g----~-------------~~~~v~~y 311 (387)
+|++|+.......+..||++ ++.+.+.... ........++-.+|++|+.+ . ..+.|++|
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 68888765444678999986 6665553211 11111123333467899863 1 12469999
Q ss_pred eCCCCceEEccccccccCceeEE-EeCCe-EEEEecC-----CceEEEEEecC
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAA-AGGGR-VCAVCEN-----GGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~-~~~~~-l~v~gg~-----~~~i~v~d~~~ 357 (387)
|+++.+.+.+. .......++ .-+++ ||+.... ...|++||+..
T Consensus 175 d~~~g~~~~~~---~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 175 PPDGSPLQRMA---DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp CSSSCCCEEEE---EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred cCCCCcEEEEe---cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 99888887764 112222233 33554 7776443 26788888763
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=93.63 E-value=0.84 Score=40.75 Aligned_cols=135 Identities=16% Similarity=0.091 Sum_probs=72.8
Q ss_pred CccEEEeCCCCceeeCC-CCCCCceeeeEEee-C-CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 164 TRPLIFDPICRTWTFGP-ELVTPRRWCAAGYS-R-GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~-~~~~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
..+++||+.+.+.+.+. .+..+. ..+.. + +.+||+-.. ...+.+||....... ..+....++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~---gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~~-~~~~~~~~~g-- 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPG---GAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKKG-TAEVLVKIPN-- 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCC---EEEECTTSSEEEEEEGG--------GTEEEEEESSSTTTT-CEEEEEECSS--
T ss_pred ceEEEEeCCCCEEEEeccCCccCc---ceEECCCCCEEEEEeCC--------CCeEEEEECCCCcCC-ccceEEeCCC--
Confidence 56899999888765432 111221 12222 3 358887432 236888888753200 0443332221
Q ss_pred ccccceeEEEECCEEEEEeee----------CCeEEEEECCCCceeeccc--cccCCCCCcEEEEeCCeEEEEeCCCCeE
Q 044903 241 FSREAIDAVGWKGKLCLVNVK----------GAEGAVYDVVANTWDDMRE--GMVRGWRGPVAAMDEEVLYGIDENSCTL 308 (387)
Q Consensus 241 ~~~~~~~~v~~~g~lyv~gg~----------~~~i~~yD~~~~~W~~~~~--~~~~~~~~~~~~~~~g~ly~~g~~~~~v 308 (387)
.+ ..++--+|.||+.... ...+.+||++...-..+.. +.... ....++..+++||+.+...+.|
T Consensus 231 --P~-gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~-~~~~~~~~~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 231 --PG-NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGE-HFEQIQEHDGLLYIGTLFHGSV 306 (322)
T ss_dssp --EE-EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTS-CCCEEEEETTEEEEECSSCSEE
T ss_pred --CC-CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccc-cceEEEEeCCEEEEeecCCCce
Confidence 11 1122235789988654 2568899987554444432 11111 1234455688999998777889
Q ss_pred EEEeCCCC
Q 044903 309 SKYDEVMD 316 (387)
Q Consensus 309 ~~yd~~~~ 316 (387)
.+|+++.+
T Consensus 307 ~~~~~~~~ 314 (322)
T 2fp8_A 307 GILVYDKK 314 (322)
T ss_dssp EEEEC---
T ss_pred EEEecccc
Confidence 99998644
No 249
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.63 E-value=1.2 Score=41.52 Aligned_cols=103 Identities=14% Similarity=0.077 Sum_probs=57.9
Q ss_pred EEEEeeeCCeEEEEECCCC---ceeeccccccCCCC--CcEEEEe--CCeEEEEeCCCCeEEEEeCCCCc-eEEcccccc
Q 044903 255 LCLVNVKGAEGAVYDVVAN---TWDDMREGMVRGWR--GPVAAMD--EEVLYGIDENSCTLSKYDEVMDD-WKEVVKSDL 326 (387)
Q Consensus 255 lyv~gg~~~~i~~yD~~~~---~W~~~~~~~~~~~~--~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~-W~~v~~~~~ 326 (387)
+++.|+....+.+||+.+. .+.........+.. -..++.. ++.+++.++.++.|.+||..+.. .+.+.....
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 5666666678999999862 22211100011111 1123332 56788888788999999998652 222222212
Q ss_pred ccCceeEEEe--CC-eEEEEecCCceEEEEEecC
Q 044903 327 LKGARHAAAG--GG-RVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 327 ~~~~~~~~~~--~~-~l~v~gg~~~~i~v~d~~~ 357 (387)
......++.+ ++ .+++.|+.++.|.+||...
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 2222222222 34 4888888889999999885
No 250
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.50 E-value=1.7 Score=40.23 Aligned_cols=104 Identities=9% Similarity=0.008 Sum_probs=57.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCC--ceeecccc--ccCCCC--CcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCce-----
Q 044903 252 KGKLCLVNVKGAEGAVYDVVAN--TWDDMREG--MVRGWR--GPVAAMD-EE-VLYGIDENSCTLSKYDEVMDDW----- 318 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~--~~~~~~--~~~~~~~-~g-~ly~~g~~~~~v~~yd~~~~~W----- 318 (387)
++++++.| .+..+.+||..+. .+..+... ...+.. -.+++.. ++ .+++.++.++.|.+||..+..-
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 56666665 5678999999832 33322100 001111 1122322 33 6788888889999999987653
Q ss_pred EEcccccc--c-------cCcee--EEEeCCeEEEEecCCceEEEEEecC
Q 044903 319 KEVVKSDL--L-------KGARH--AAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 319 ~~v~~~~~--~-------~~~~~--~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
..+..... . ..... ....+|++++.++. +.+.+||+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 22221110 0 01222 22336777777777 8999999985
No 251
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.44 E-value=3.3 Score=37.42 Aligned_cols=144 Identities=9% Similarity=-0.077 Sum_probs=74.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCc-eeeeEEe-eCCE-EEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPR-RWCAAGY-SRGA-VYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r-~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
..++++|..+.+++.+.. ..+. .....+. -+++ |++...... .....+.++|..+++ ...+...+.
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~l~~~d~~~g~----~~~l~~~~~-- 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKG----QTDRVIYKANPETLE----NEEVMVMPP-- 284 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETT----TCCEEEEEECTTTCC----EEEEEECCS--
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCC----CccceEEEEECCCCC----eEEeeeCCC--
Confidence 578999999888888765 2111 1111222 2444 444432211 112358999999887 666554331
Q ss_pred ccccceeEEEE-CCEEEEEeee----------------CCeEEEEECCCCceeeccccccC----------CCCCcEEEE
Q 044903 241 FSREAIDAVGW-KGKLCLVNVK----------------GAEGAVYDVVANTWDDMREGMVR----------GWRGPVAAM 293 (387)
Q Consensus 241 ~~~~~~~~v~~-~g~lyv~gg~----------------~~~i~~yD~~~~~W~~~~~~~~~----------~~~~~~~~~ 293 (387)
. .....- +|++++.++. ...++.+|+.+++.+.+...... ....+....
T Consensus 285 ~----~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~ 360 (396)
T 3c5m_A 285 C----SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTP 360 (396)
T ss_dssp E----EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECT
T ss_pred C----CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEcc
Confidence 1 122233 7776665431 15788999988776655421110 011122222
Q ss_pred eCCeEEEEeCCCC--eEEEEeCCCCceEEcc
Q 044903 294 DEEVLYGIDENSC--TLSKYDEVMDDWKEVV 322 (387)
Q Consensus 294 ~~g~ly~~g~~~~--~v~~yd~~~~~W~~v~ 322 (387)
.+..|++.....+ .++.+|..+..++++.
T Consensus 361 dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 361 NDDGVLFTSDFEGVPAIYIADVPESYKHLEH 391 (396)
T ss_dssp TSSEEEEEECTTSSCEEEEEECCTTCC----
T ss_pred CCCeEEEEecCCCCceEEEEEEccccccccc
Confidence 3345666554333 5888888887776643
No 252
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=93.36 E-value=4.4 Score=36.54 Aligned_cols=114 Identities=12% Similarity=0.104 Sum_probs=67.0
Q ss_pred CCEEEEEeeeCCe-EEEEECCCCcee-eccccccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCC---ceEEccc--
Q 044903 252 KGKLCLVNVKGAE-GAVYDVVANTWD-DMREGMVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMD---DWKEVVK-- 323 (387)
Q Consensus 252 ~g~lyv~gg~~~~-i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~---~W~~v~~-- 323 (387)
+|++.+.++.+.. +.++|..+.+-. .+..+.... .-.+++. .+++.++.++.++.+.+||.++. .+..+..
T Consensus 206 ~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~ 284 (355)
T 3vu4_A 206 KSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWI 284 (355)
T ss_dssp TSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEECCCCCEEEEEECCCEEEEEEccCCCCccccccccee
Confidence 6777777777776 999999876432 121110111 1112222 35677777778899999998654 3333322
Q ss_pred cc---------------ccc---CceeEEEeCCeEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 324 SD---------------LLK---GARHAAAGGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 324 ~~---------------~~~---~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
.+ ... ....+...+|+.++++..++.+.+|++...+.+..|.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~~~~~~~ 345 (355)
T 3vu4_A 285 NMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDEMERWLI 345 (355)
T ss_dssp ECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETTTTEEEE
T ss_pred eccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCCCceEEE
Confidence 00 000 02223345778888877788888888886655666765
No 253
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.32 E-value=2.9 Score=37.79 Aligned_cols=187 Identities=10% Similarity=-0.087 Sum_probs=88.4
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSR 243 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~ 243 (387)
..++++|..+.+-+.+..-............+++.+++..... .......++++|..+.. ...+........
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~--~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~-- 239 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGP--HDLVDARMWLINEDGTN----MRKVKTHAEGES-- 239 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSC--TTTSSCSEEEEETTSCC----CEESCCCCTTEE--
T ss_pred ceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecC--CCCCcceEEEEeCCCCc----eEEeeeCCCCcc--
Confidence 5678999998876665432211111122220343332222211 11224578899988777 666653221100
Q ss_pred cceeEEEECCE-EEEEeeeC--C--eEEEEECCCCceeecccccc-----CCCCCcEEEEeCCeEEEEe--------CCC
Q 044903 244 EAIDAVGWKGK-LCLVNVKG--A--EGAVYDVVANTWDDMREGMV-----RGWRGPVAAMDEEVLYGID--------ENS 305 (387)
Q Consensus 244 ~~~~~v~~~g~-lyv~gg~~--~--~i~~yD~~~~~W~~~~~~~~-----~~~~~~~~~~~~g~ly~~g--------~~~ 305 (387)
....+..-+|+ |++..... . .++++|+++++-+.+..... ....+....-.|..|++.. ...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 00111222565 54443332 2 38999998887655432111 0011223333344444432 234
Q ss_pred CeEEEEeCCCCceEEcccccc-c---------cCceeEEEeCCe-EEEEecC--CceEEEEEecCC
Q 044903 306 CTLSKYDEVMDDWKEVVKSDL-L---------KGARHAAAGGGR-VCAVCEN--GGGIVVVDVKAA 358 (387)
Q Consensus 306 ~~v~~yd~~~~~W~~v~~~~~-~---------~~~~~~~~~~~~-l~v~gg~--~~~i~v~d~~~~ 358 (387)
..|++||+++.+-+.+..... . ........-+|+ |++.+.. ..+++++|....
T Consensus 320 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 320 PFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPES 385 (388)
T ss_dssp CEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCGG
T ss_pred CEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECChh
Confidence 579999999887666553322 0 112223445665 4444332 356777777643
No 254
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.99 E-value=5 Score=36.17 Aligned_cols=198 Identities=12% Similarity=0.044 Sum_probs=101.0
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC------CCcee-eeEEe----eCCEEEEEecCCCCC-----C
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV------TPRRW-CAAGY----SRGAVYVASGIGSQF-----S 209 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~------~~r~~-~~~~~----~~~~iyv~GG~~~~~-----~ 209 (387)
++.+|+..-+ ...+.++||..+.-.++ ..+ .+... .+... -.++|+|+.-.+..+ .
T Consensus 24 ~g~~~vs~l~-------~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 24 RQVFYQSNLY-------KGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp TTEEEEEETT-------TTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CCEEEEEecc-------CCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 4666665322 25678889986654443 222 11222 23333 246888863211111 1
Q ss_pred CCCCceEEEEeCC---CCccccCeEEc-CCCCCC-------cccccceeEEEE--CCEEEEEeeeC-CeEEEEECCCC--
Q 044903 210 SDVAKSVEKWDLM---NGEKNSRWEKT-GELKDG-------RFSREAIDAVGW--KGKLCLVNVKG-AEGAVYDVVAN-- 273 (387)
Q Consensus 210 ~~~~~~v~vyd~~---t~~~~~~W~~~-~~~~~~-------~~~~~~~~~v~~--~g~lyv~gg~~-~~i~~yD~~~~-- 273 (387)
......+.+||+. +++.. |..- ...... .+. .+.-+++ +|.+||.+..+ ..|+.+|+...
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~--~~~dL~~~~~~~~~~~g~~~~--~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~ 171 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPV--WSVNFEKVQDEFEKKAGKRPF--GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTV 171 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCS--EEEESHHHHHHHHHHHSSCCE--EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCE
T ss_pred cCCCCEEEEEcCCcCCCCCEE--EEecCcccccccccccccccc--CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEE
Confidence 1124678999988 66533 6532 111100 110 1222333 58899998888 89999999754
Q ss_pred -ceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCceEEcccc--c---cccCcee--EEEeCCeEEEE
Q 044903 274 -TWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKS--D---LLKGARH--AAAGGGRVCAV 343 (387)
Q Consensus 274 -~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~--~---~~~~~~~--~~~~~~~l~v~ 343 (387)
.|-.-.+.......-..++.. +..|++.+. .+.++++|..+....+++.. . .....-. ....+|+++++
T Consensus 172 ~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV 250 (334)
T 2p9w_A 172 STFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLV 250 (334)
T ss_dssp EEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEE
T ss_pred eeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEE
Confidence 354322111111112244444 445666655 88999999885433122211 1 1122222 33479999777
Q ss_pred ecCCceEEEEEec
Q 044903 344 CENGGGIVVVDVK 356 (387)
Q Consensus 344 gg~~~~i~v~d~~ 356 (387)
+.....+.++.-.
T Consensus 251 ~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 251 GARAPYAISFRSW 263 (334)
T ss_dssp EEETTEEEEEECS
T ss_pred EcCCCCEEEEECC
Confidence 6554555555444
No 255
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.93 E-value=1.3 Score=43.05 Aligned_cols=169 Identities=12% Similarity=-0.048 Sum_probs=86.3
Q ss_pred CccEEEeC--CCCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 164 TRPLIFDP--ICRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vydp--~t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
..++..+. .... ..+......+ ..+...-++.++++.+... .+.+||..+++ -+.+...+.
T Consensus 90 ~~l~~~~~~~~g~~-~~l~~~~~~~-~~~~s~dg~~~~~~s~~~~--------~~~l~d~~~g~----~~~l~~~~~--- 152 (582)
T 3o4h_A 90 HALFKVNTSRPGEE-QRLEAVKPMR-ILSGVDTGEAVVFTGATED--------RVALYALDGGG----LRELARLPG--- 152 (582)
T ss_dssp EEEEEEETTSTTCC-EECTTSCSBE-EEEEEECSSCEEEEEECSS--------CEEEEEEETTE----EEEEEEESS---
T ss_pred eEEEEEeccCCCcc-ccccCCCCce-eeeeCCCCCeEEEEecCCC--------CceEEEccCCc----EEEeecCCC---
Confidence 35666776 4333 2443333222 2233333445555544322 23488988887 666543221
Q ss_pred cccceeEEEECCEEEEEeeeC----CeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCC--eEEEEeCC
Q 044903 242 SREAIDAVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSC--TLSKYDEV 314 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~--~v~~yd~~ 314 (387)
...+..-||+..+.+... ..++.+|+++++++.+.... +.. ...+ .-+|+..+....++ .|++||.+
T Consensus 153 ---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~--~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~ 226 (582)
T 3o4h_A 153 ---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGE--GSF-SSASISPGMKVTAGLETAREARLVTVDPR 226 (582)
T ss_dssp ---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSS--CEE-EEEEECTTSCEEEEEECSSCEEEEEECTT
T ss_pred ---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCC--Ccc-ccceECCCCCEEEEccCCCeeEEEEEcCC
Confidence 133344466655443332 56889999988887664311 110 1122 23454333544555 79999999
Q ss_pred CCceEEccccccccCce-------eEEEeCCeEEEEecCCceEEEEEe
Q 044903 315 MDDWKEVVKSDLLKGAR-------HAAAGGGRVCAVCENGGGIVVVDV 355 (387)
Q Consensus 315 ~~~W~~v~~~~~~~~~~-------~~~~~~~~l~v~gg~~~~i~v~d~ 355 (387)
+.+.+.+......-... ....-+|++++.+..++.+.+|++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 227 DGSVEDLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TCCEEECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred CCcEEEccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 88777322111000001 113446677776655666666665
No 256
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.82 E-value=7.6 Score=37.87 Aligned_cols=94 Identities=7% Similarity=-0.051 Sum_probs=50.2
Q ss_pred CeEEEEECCCCceeeccccccCCCCCcEEE-EeCC-eEEEEeCCCCeEEEEeCCCCceEEcc----ccccccCceeEEEe
Q 044903 263 AEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEE-VLYGIDENSCTLSKYDEVMDDWKEVV----KSDLLKGARHAAAG 336 (387)
Q Consensus 263 ~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g-~ly~~g~~~~~v~~yd~~~~~W~~v~----~~~~~~~~~~~~~~ 336 (387)
..+.+.|........+.. +..+..-+... -.++ .+|+....+++|.++|.++.+-.... ..|.+......+.-
T Consensus 320 g~v~~vd~~~~~~~~v~~-i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p 398 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTE-ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHP 398 (567)
T ss_dssp TEEEEEETTCSSEEEEEE-EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEET
T ss_pred CeEEEEecCCCccceeee-eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECC
Confidence 677888877654433222 11121111222 2234 45555555688999999988543322 22332222222333
Q ss_pred -CCeEEEEec-CCceEEEEEecC
Q 044903 337 -GGRVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 337 -~~~l~v~gg-~~~~i~v~d~~~ 357 (387)
++.+|+.+. ++..|.|+|...
T Consensus 399 ~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 399 TFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCCcEEEeCCCCCCeEEEecCCC
Confidence 477888764 347899999885
No 257
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=92.62 E-value=0.033 Score=51.55 Aligned_cols=148 Identities=9% Similarity=-0.034 Sum_probs=64.1
Q ss_pred EEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEEC
Q 044903 191 AGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDV 270 (387)
Q Consensus 191 ~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~ 270 (387)
.++.++.||+.+.. ..+.++|..+++.. |+.-. .+.. ...+..+|++|+.+.....+.++|.
T Consensus 5 P~v~~~~v~~gs~d---------g~v~a~d~~tG~~~--W~~~~---~~~~----s~p~~~~g~~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 5 VTLPETLLFVSTLD---------GSLHAVSKRTGSIK--WTLKE---DPVL----QVPTHVEEPAFLPDPNDGSLYTLGS 66 (369)
T ss_dssp ---CTTEEEEEETT---------SEEEEEETTTCCEE--EEEEC---CCSC----CCC-----CCEEECTTTCCEEEC--
T ss_pred CeeeCCEEEEEcCC---------CEEEEEECCCCCEE--EEecC---CCce----ecceEcCCCEEEEeCCCCEEEEEEC
Confidence 34556777775431 26889999988865 87654 1111 2334557778887655568999998
Q ss_pred CCC--ceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCC--ceEEccccccccCceeEEEeCCeEEEEecC
Q 044903 271 VAN--TWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMD--DWKEVVKSDLLKGARHAAAGGGRVCAVCEN 346 (387)
Q Consensus 271 ~~~--~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~--~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~ 346 (387)
+++ .|+.-..........+.. ..++.||+ +..++.++.||+++. .|+.-.... ......++.| +++..
T Consensus 67 ~tG~~~w~~~~~~~~~~~~sp~~-~~~~~v~~-g~~dg~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v-~~~~~ 138 (369)
T 2hz6_A 67 KNNEGLTKLPFTIPELVQASPCR-SSDGILYM-GKKQDIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLL-YLGRT 138 (369)
T ss_dssp ---CCSEECSCCHHHHHTTCSCC------CCC-CEEEEEEEEECCC---------------------------E-EEEEE
T ss_pred CCCceeeeeeccCccccccCceE-ecCCEEEE-EeCCCEEEEEECCCCcEEEEecCCCc-----ccccccCCEE-EEEec
Confidence 654 565321100000111111 13555554 334567899988754 465422110 0111134444 44455
Q ss_pred CceEEEEEecCCCCCceeEE
Q 044903 347 GGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 347 ~~~i~v~d~~~~~~~~~W~~ 366 (387)
++.+..+|..++ ...|+.
T Consensus 139 dg~v~a~d~~tG--~~~W~~ 156 (369)
T 2hz6_A 139 EYTITMYDTKTR--ELRWNA 156 (369)
T ss_dssp EEEEECCCSSSS--SCCCEE
T ss_pred CCEEEEEECCCC--CEEEeE
Confidence 677888888743 235775
No 258
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.60 E-value=8.8 Score=38.04 Aligned_cols=139 Identities=13% Similarity=0.141 Sum_probs=68.0
Q ss_pred CceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCE-EEEEeeeC----CeEEEEECCCC-ceeeccccccC
Q 044903 213 AKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGK-LCLVNVKG----AEGAVYDVVAN-TWDDMREGMVR 284 (387)
Q Consensus 213 ~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~-lyv~gg~~----~~i~~yD~~~~-~W~~~~~~~~~ 284 (387)
...+.++|..+++ -..+....... .....+.+ +|+ |++..... ..+..+|+.+. ..+.+......
T Consensus 234 ~~~l~~~d~~~~~----~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~ 306 (706)
T 2z3z_A 234 HVTVGIYHLATGK----TVYLQTGEPKE---KFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK 306 (706)
T ss_dssp EEEEEEEETTTTE----EEECCCCSCTT---CEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS
T ss_pred eeEEEEEECCCCc----eEeeccCCCCc---eeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC
Confidence 3578899998887 55544211110 11122222 565 54433221 47889999887 66655321111
Q ss_pred CCC---CcEEEEe--CCeEEEEeCCCC--eEEEEeCCCCceEEccccccccCceeEEEeCC-eEEEEecCC----ceEEE
Q 044903 285 GWR---GPVAAMD--EEVLYGIDENSC--TLSKYDEVMDDWKEVVKSDLLKGARHAAAGGG-RVCAVCENG----GGIVV 352 (387)
Q Consensus 285 ~~~---~~~~~~~--~g~ly~~g~~~~--~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~-~l~v~gg~~----~~i~v 352 (387)
.+. ....... +|++++.+..++ .|+.+|.+......+..............-+| .|++.+..+ ..++.
T Consensus 307 ~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 307 HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 111 1112233 667655554444 47777766666665532111111111222244 566665443 36777
Q ss_pred EEecCC
Q 044903 353 VDVKAA 358 (387)
Q Consensus 353 ~d~~~~ 358 (387)
+|..++
T Consensus 387 ~d~~~~ 392 (706)
T 2z3z_A 387 IDIKGG 392 (706)
T ss_dssp EETTCC
T ss_pred EEcCCC
Confidence 777643
No 259
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=91.97 E-value=10 Score=37.27 Aligned_cols=145 Identities=12% Similarity=-0.012 Sum_probs=79.3
Q ss_pred CccEEEeCC-CC---ceeeCCCCCCCceeeeEE-eeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCC
Q 044903 164 TRPLIFDPI-CR---TWTFGPELVTPRRWCAAG-YSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKD 238 (387)
Q Consensus 164 ~~~~vydp~-t~---~W~~l~~~~~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~ 238 (387)
..++++|.. +. +.+.+..-... .....+ .-++++|+.+..+. ...++.+|..+++ ++.+.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~-~~~~~~~spdg~l~~~~~~~~------~~~l~~~~~~~~~----~~~l~~~~~ 285 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEE-AIAQAEWAPDGSLIVATDRTG------WWNLHRVDPATGA----ATQLCRREE 285 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTB-CEEEEEECTTSCEEEEECTTS------SCEEEEECTTTCC----EEESSCCSS
T ss_pred cEEEEEEECCCCcccccEEeCCCCCc-eEcceEECCCCeEEEEECCCC------CeEEEEEECCCCc----eeecccccc
Confidence 468999998 56 44444321111 111222 22567776665432 2368889988888 888765432
Q ss_pred Cc----ccccceeEEEE-CCEEEEEeeeC-CeEEEEECCCCceeeccccccCCCCCcEE-EEeCCeEEEEeCCC---CeE
Q 044903 239 GR----FSREAIDAVGW-KGKLCLVNVKG-AEGAVYDVVANTWDDMREGMVRGWRGPVA-AMDEEVLYGIDENS---CTL 308 (387)
Q Consensus 239 ~~----~~~~~~~~v~~-~g~lyv~gg~~-~~i~~yD~~~~~W~~~~~~~~~~~~~~~~-~~~~g~ly~~g~~~---~~v 308 (387)
.. ........+.. ++++++.+..+ ..++.+|..++..+.+... .+. ...+ ...++.+++..... ..+
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~--~~~-~~~~~s~~~~~~~~~~~~~~~~~~i 362 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP--WTE-WAATLTVSGTRAVGVAASPRTAYEV 362 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS--CCE-EEEEEEEETTEEEEEEEETTEEEEE
T ss_pred cccCccccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC--CCe-EEEEEecCCCEEEEEEcCCCCCCEE
Confidence 21 11111122332 67776665433 4566678887777766532 111 1122 34566666665322 368
Q ss_pred EEEeCCCCceEEcc
Q 044903 309 SKYDEVMDDWKEVV 322 (387)
Q Consensus 309 ~~yd~~~~~W~~v~ 322 (387)
+.+|.++.+.+.+.
T Consensus 363 ~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 363 VELDTVTGRARTIG 376 (662)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECCCCceEEee
Confidence 88899888877764
No 260
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.78 E-value=8.1 Score=37.37 Aligned_cols=107 Identities=13% Similarity=-0.022 Sum_probs=58.6
Q ss_pred eEEEECC-EEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCC----CeEEEEeCCCCceEEc
Q 044903 247 DAVGWKG-KLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENS----CTLSKYDEVMDDWKEV 321 (387)
Q Consensus 247 ~~v~~~g-~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~----~~v~~yd~~~~~W~~v 321 (387)
.+...+| .++++.+....+.+||+++++-+.+..... .... ..-+|+..++...+ ..|++||.++.+++.+
T Consensus 115 ~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~-~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l 190 (582)
T 3o4h_A 115 LSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFV-SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF 190 (582)
T ss_dssp EEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEE-EEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE
T ss_pred eeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEE-ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe
Confidence 3455566 355555544455688998887666543211 1122 22344443333222 5699999999888766
Q ss_pred cccccccCceeEEEeCCeEEEEecCCc--eEEEEEecCC
Q 044903 322 VKSDLLKGARHAAAGGGRVCAVCENGG--GIVVVDVKAA 358 (387)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~l~v~gg~~~--~i~v~d~~~~ 358 (387)
....... ......-+|+.++.+..++ .++++|..++
T Consensus 191 ~~~~~~~-~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~ 228 (582)
T 3o4h_A 191 DSGEGSF-SSASISPGMKVTAGLETAREARLVTVDPRDG 228 (582)
T ss_dssp CCSSCEE-EEEEECTTSCEEEEEECSSCEEEEEECTTTC
T ss_pred ecCCCcc-ccceECCCCCEEEEccCCCeeEEEEEcCCCC
Confidence 4322111 1223344666555544444 7888988754
No 261
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=91.67 E-value=7.1 Score=34.95 Aligned_cols=205 Identities=12% Similarity=0.031 Sum_probs=98.9
Q ss_pred eeEEEe-CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCC-CC---c-eeeeEEee-CCEEEEEecCCCCCCCCC
Q 044903 140 VQLVSL-SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELV-TP---R-RWCAAGYS-RGAVYVASGIGSQFSSDV 212 (387)
Q Consensus 140 ~~~~~~-~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~-~~---r-~~~~~~~~-~~~iyv~GG~~~~~~~~~ 212 (387)
..++.. ++++|+....... .. ..++.++ +.+-...|... .. . .-+..+.. +++|||+..... ...
T Consensus 20 ~~va~~~~g~~~v~~~~~~~--~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~---~~~ 91 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQ--PE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ---SKS 91 (343)
T ss_dssp EEEEECTTSCEEEEECGGGC--CS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH---HTS
T ss_pred ceEEECCCCCEEEEeCCCCC--Cc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC---cCC
Confidence 344443 6788887432111 11 4677777 44444333211 11 1 11222222 478999853210 011
Q ss_pred CceEEEEeCCCCccccCeEEcCCCCCCc--ccccceeEEEE--CCEEEEEee---eCCeEEEEECCCC-ceeeccc--cc
Q 044903 213 AKSVEKWDLMNGEKNSRWEKTGELKDGR--FSREAIDAVGW--KGKLCLVNV---KGAEGAVYDVVAN-TWDDMRE--GM 282 (387)
Q Consensus 213 ~~~v~vyd~~t~~~~~~W~~~~~~~~~~--~~~~~~~~v~~--~g~lyv~gg---~~~~i~~yD~~~~-~W~~~~~--~~ 282 (387)
...+.+||+.+++ -...-.++... ........++- +|.+|+... ....+.+||+.++ .|+.+.. .+
T Consensus 92 ~~~i~~~d~~tg~----~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~ 167 (343)
T 2qe8_A 92 VPKLVAWDTLNNQ----LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI 167 (343)
T ss_dssp CCEEEEEETTTTE----EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT
T ss_pred CCeEEEEECCCCe----EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc
Confidence 2478999999887 43322222110 00011223333 478999865 4478999999765 5665532 11
Q ss_pred -c-------CC--------------C-CC-cEEEEe--CCeEEEEeCCCCeEEEEeCCC--C-------ceEEccccccc
Q 044903 283 -V-------RG--------------W-RG-PVAAMD--EEVLYGIDENSCTLSKYDEVM--D-------DWKEVVKSDLL 327 (387)
Q Consensus 283 -~-------~~--------------~-~~-~~~~~~--~g~ly~~g~~~~~v~~yd~~~--~-------~W~~v~~~~~~ 327 (387)
+ .+ + .+ ..+++. +..||+.......++++|... + .+..+......
T Consensus 168 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (343)
T 2qe8_A 168 APEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK 247 (343)
T ss_dssp SCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred cccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence 0 00 0 01 112222 335777765556788887531 0 01111100000
Q ss_pred cCce-eEEEeCCeEEEEecCCceEEEEEec
Q 044903 328 KGAR-HAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 328 ~~~~-~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
...- .++.-+|.||+....++.|.+||+.
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 0111 2333478888887677888999883
No 262
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.05 E-value=3.7 Score=40.23 Aligned_cols=119 Identities=16% Similarity=0.160 Sum_probs=70.0
Q ss_pred eEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc-cc--cceeEEEECCEEEEEeeeCCeEE
Q 044903 190 AAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF-SR--EAIDAVGWKGKLCLVNVKGAEGA 266 (387)
Q Consensus 190 ~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~-~~--~~~~~v~~~g~lyv~gg~~~~i~ 266 (387)
+.++.+++|||.... ..+..+|..|++.. |+.-...+.... .+ .....++.++++|+.. ....+.
T Consensus 63 ~P~v~~g~vyv~~~~---------~~v~AlD~~tG~~~--W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t-~dg~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASY---------SRLFALDAKTGKRL--WTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT-LDASVV 130 (582)
T ss_dssp CCEEETTEEEEEETT---------TEEEEEESSSCCEE--EEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE-TTTEEE
T ss_pred ccEEECCEEEEEcCC---------CCEEEEECCCCcEE--EEEcCCCCcccccccccCCCccEEECCEEEEEe-CCCEEE
Confidence 446789999998642 13789999998866 987654332110 00 0122356789998763 235899
Q ss_pred EEECCCC--ceeeccccccCCC-CCcEEEEeCC------eEEEEeC-----CCCeEEEEeCCCC--ceEE
Q 044903 267 VYDVVAN--TWDDMREGMVRGW-RGPVAAMDEE------VLYGIDE-----NSCTLSKYDEVMD--DWKE 320 (387)
Q Consensus 267 ~yD~~~~--~W~~~~~~~~~~~-~~~~~~~~~g------~ly~~g~-----~~~~v~~yd~~~~--~W~~ 320 (387)
++|.++. .|+.-......+. ...+.++.++ .||+-.. .++.|+.||.++. .|+.
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9999876 6985432111111 0112223345 5665321 2578999998765 5864
No 263
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=90.79 E-value=9.6 Score=34.81 Aligned_cols=63 Identities=11% Similarity=0.134 Sum_probs=37.9
Q ss_pred eCCeEEEEeCC---------CCeEEEEeCCCCceEEccccccccCceeE-EEeCCe--EEEEecCCceEEEEEecCC
Q 044903 294 DEEVLYGIDEN---------SCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGGR--VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~~g~ly~~g~~---------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~~--l~v~gg~~~~i~v~d~~~~ 358 (387)
.++++|+.... .+.|.++|.++.+= +...+.......+ +.-+|+ +|+...+++.+.|||..+.
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 35789997531 35799999987643 3333332233333 344555 4444335789999999854
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.56 E-value=7.9 Score=36.27 Aligned_cols=142 Identities=13% Similarity=0.125 Sum_probs=77.7
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC----CeEEEEECC
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG----AEGAVYDVV 271 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~----~~i~~yD~~ 271 (387)
+.|||+-.. ..+.++|+.+++ ...+..... . -...++.-+|.||+..... ..+..++..
T Consensus 153 g~Lyv~D~~---------~~I~~id~~~g~----v~~~~~~~~-~---P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 153 DDLYWVGQR---------DAFRHVDFVNQY----VDIKTTNIG-Q---CADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CEEEEECBT---------SCEEEEETTTTE----EEEECCCCS-C---EEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred CEEEEEeCC---------CCEEEEECCCCE----EEEeecCCC-C---ccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 789987321 578999998888 666653111 0 0122333456799885422 234555543
Q ss_pred CCceeeccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCce-EEccccccccCceeEE-EeCC-eEEEEecC
Q 044903 272 ANTWDDMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDDW-KEVVKSDLLKGARHAA-AGGG-RVCAVCEN 346 (387)
Q Consensus 272 ~~~W~~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W-~~v~~~~~~~~~~~~~-~~~~-~l~v~gg~ 346 (387)
..+..... .........+++. +|.||+.....+.|++||+++..- +.+...........++ .-+| .|||.-..
T Consensus 216 -~~~~~~~~-~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 216 -SGFTERLS-LCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp -GTTCCEEE-EEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred -CCeecccc-ccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 22321000 1111111123332 688999987778899999986655 3332221111122233 3344 59998777
Q ss_pred CceEEEEEec
Q 044903 347 GGGIVVVDVK 356 (387)
Q Consensus 347 ~~~i~v~d~~ 356 (387)
.+.|.++|..
T Consensus 294 ~~~I~~~~~d 303 (433)
T 4hw6_A 294 KHCIYRVDYN 303 (433)
T ss_dssp TTEEEEEEBC
T ss_pred CCEEEEEeCC
Confidence 7899998865
No 265
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=90.24 E-value=5 Score=36.18 Aligned_cols=147 Identities=8% Similarity=-0.067 Sum_probs=70.8
Q ss_pred CCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCE-EEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGA-VYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 163 ~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
...++++|..+...+.+............+. -+++ |+....... .....+.++|+.+++ -+.+..++...
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~----~~~~~l~~~d~~~g~----~~~l~~~~~~~ 286 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG----SPDRFIYSADPETLE----NRQLTSMPACS 286 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT----CCCEEEEEECTTTCC----EEEEEEECCEE
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC----CCcceEEEEecCCCc----eEEEEcCCCce
Confidence 4578999998888777765332111111122 2444 544332211 112358999999988 66554433200
Q ss_pred ---ccccceeEEEECCE-EEEEe--------eeCCeEEEEECCCCceeecccccc-C---------CCCCcEEEEeCCeE
Q 044903 241 ---FSREAIDAVGWKGK-LCLVN--------VKGAEGAVYDVVANTWDDMREGMV-R---------GWRGPVAAMDEEVL 298 (387)
Q Consensus 241 ---~~~~~~~~v~~~g~-lyv~g--------g~~~~i~~yD~~~~~W~~~~~~~~-~---------~~~~~~~~~~~g~l 298 (387)
.... .....-+|+ |++.. .....++.+|+++++-+.+..... . ....++..-.+..|
T Consensus 287 ~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l 365 (388)
T 3pe7_A 287 HLMSNYD-GSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQI 365 (388)
T ss_dssp EEEECTT-SSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEE
T ss_pred eeeecCC-CCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEE
Confidence 0000 011222333 33221 112578889988876655542111 0 01122222223356
Q ss_pred EEEeCCCC--eEEEEeCCCCce
Q 044903 299 YGIDENSC--TLSKYDEVMDDW 318 (387)
Q Consensus 299 y~~g~~~~--~v~~yd~~~~~W 318 (387)
++.....+ .|+.+|.....|
T Consensus 366 ~~~s~~~g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 366 LFTSDVHGKPALYLATLPESVW 387 (388)
T ss_dssp EEEECTTSSCEEEEEECCGGGG
T ss_pred EEEecCCCceeEEEEECChhcc
Confidence 65554333 588888877766
No 266
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=90.18 E-value=13 Score=35.25 Aligned_cols=200 Identities=15% Similarity=0.109 Sum_probs=101.8
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceee--CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF--GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~--l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t 223 (387)
++++|++.| +.+|.||..+++..+ -+.++. --++....+++|++-|. ..+.||..+
T Consensus 158 ~~~~yfFkG---------~~yw~yd~~~~~~~~~~w~gi~~---iDAA~~~~g~~YfFkG~----------~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG---------NRKWFWDLTTGTKKERSWPAVGN---CTSALRWLGRYYCFQGN----------QFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET---------TEEEEEETTTTEEEEECCTTSCC---CSEEEEETTEEEEEETT----------EEEEECTTT
T ss_pred CCeEEEEec---------ccEEEEecccceeecccCCCCCc---cchheeeCCceEEEECC----------EEEEEcCcc
Confidence 678888887 467999998876443 122322 23344457899998775 234555543
Q ss_pred Ccccc--------CeEEcCCCCCC--------------ccc-ccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceee-
Q 044903 224 GEKNS--------RWEKTGELKDG--------------RFS-REAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDD- 277 (387)
Q Consensus 224 ~~~~~--------~W~~~~~~~~~--------------~~~-~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~- 277 (387)
.+..- .|..++....+ ... .....++.. +|++|++-| ...+.+|...+.+..
T Consensus 216 ~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg--~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 216 GEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG--SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp CCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET--TEEEECTTGGGCCCCE
T ss_pred CcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC--CEEEEEecCCCCcCcc
Confidence 32100 02222211100 000 012344543 689998855 355666664433221
Q ss_pred -ccc---cccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccc----------cccc---cCceeEEE--eCC
Q 044903 278 -MRE---GMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVK----------SDLL---KGARHAAA--GGG 338 (387)
Q Consensus 278 -~~~---~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~----------~~~~---~~~~~~~~--~~~ 338 (387)
+.. +++.. -.++...++++|++- ...+++|+..+. .+.+.. .|.. ..--+++. ..+
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFk--G~~yw~f~~~~g-~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ 368 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQ--DTKVYVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSS 368 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEE--TTEEEEEECSBS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCC
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEe--CCEEEEEeCCCC-ceecCCCCeEHHHhccCCCccccCcccEEEEeCCCC
Confidence 111 11222 234445578999995 457899986531 222211 1111 11122332 468
Q ss_pred eEEEEecCCceEEEEEecCCCCCceeEE--cCCCCceeeEE
Q 044903 339 RVCAVCENGGGIVVVDVKAAAAPTIFVV--DTPLGFEALSV 377 (387)
Q Consensus 339 ~l~v~gg~~~~i~v~d~~~~~~~~~W~~--~~~~~~~~~~~ 377 (387)
++|++ .|...+.||.... +-.++.. .+|...+.+..
T Consensus 369 ktyfF--kG~~ywryd~~~~-Pr~i~~~~~gi~~~vdAaf~ 406 (460)
T 1qhu_A 369 RLHIM--AGRRLWWLDLKSG-AQATWTELPWPHEKVDGALC 406 (460)
T ss_dssp EEEEE--ETTEEEEEEGGGG-GGCCCEEECCSCSCCSEEEE
T ss_pred EEEEE--ECCEEEEEECCCC-ccchhhhCCCCCCCcCEEEe
Confidence 99999 4678889998844 2233432 34555554443
No 267
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=90.09 E-value=21 Score=37.52 Aligned_cols=133 Identities=11% Similarity=-0.003 Sum_probs=69.6
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEE-EEECCCCceeeccccccCCCCCcEEE-
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGA-VYDVVANTWDDMREGMVRGWRGPVAA- 292 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~-~yD~~~~~W~~~~~~~~~~~~~~~~~- 292 (387)
.+.++|..+.. -..+...+.... ...+.. +|+.++.......++ +||..+..-..+.. .. . ....++
T Consensus 318 ~i~~~~~~~~~----~~~~~~~~~~~~---~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~-~~-~-~~~~~~~ 386 (1045)
T 1k32_A 318 QAFIQDVSGTY----VLKVPEPLRIRY---VRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEE-NL-G-NVFAMGV 386 (1045)
T ss_dssp EEEEECTTSSB----EEECSCCSCEEE---EEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCC-CC-C-SEEEEEE
T ss_pred EEEEEcCCCCc----eEEccCCCcceE---EeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecC-Cc-c-ceeeeEE
Confidence 56777777665 554432221010 011222 565444433345677 88988776555541 11 1 111222
Q ss_pred EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecC-C---------ceEEEEEecCC
Q 044903 293 MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCEN-G---------GGIVVVDVKAA 358 (387)
Q Consensus 293 ~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~-~---------~~i~v~d~~~~ 358 (387)
..+|+..+++..++.+++||.++.+-..+..............-+|+.+++++. + ..++++|+.++
T Consensus 387 SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g 462 (1045)
T 1k32_A 387 DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR 462 (1045)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT
T ss_pred CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC
Confidence 235665556666789999999988766554221111112233446665555432 1 47899998754
No 268
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=89.90 E-value=17 Score=36.23 Aligned_cols=132 Identities=12% Similarity=0.006 Sum_probs=73.1
Q ss_pred ceEEEEeCCCC--ccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC---CeEEEEECCCC---ceeeccccccCC
Q 044903 214 KSVEKWDLMNG--EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVAN---TWDDMREGMVRG 285 (387)
Q Consensus 214 ~~v~vyd~~t~--~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~---~~i~~yD~~~~---~W~~~~~~~~~~ 285 (387)
+.++++|..+. + |..+..-.... .......+++||+.+..+ ..+...|+.+. .|+.+-+.....
T Consensus 259 ~~i~~~d~~~~~~~----~~~l~~~~~~~----~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 330 (693)
T 3iuj_A 259 NRLYVKDLSQENAP----LLTVQGDLDAD----VSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV 330 (693)
T ss_dssp CEEEEEETTSTTCC----CEEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC
T ss_pred cEEEEEECCCCCCc----eEEEeCCCCce----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE
Confidence 57888898765 5 77765322111 122334578899886543 67899998763 588764322211
Q ss_pred CCCcEEEEeCCeEEEEeCCCC--eEEEEeCCCCceEEccccccccCceeEEE--eC-CeEEEEecC---CceEEEEEecC
Q 044903 286 WRGPVAAMDEEVLYGIDENSC--TLSKYDEVMDDWKEVVKSDLLKGARHAAA--GG-GRVCAVCEN---GGGIVVVDVKA 357 (387)
Q Consensus 286 ~~~~~~~~~~g~ly~~g~~~~--~v~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~-~~l~v~gg~---~~~i~v~d~~~ 357 (387)
- .....++.|++....++ .|++||.++.....+.. +... ....+. .+ +.|++.... -..++.+|+.+
T Consensus 331 --~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~-p~~~-~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 331 --L-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL-PGLG-SVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp --E-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC-SSSS-EEEECCCCTTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred --E-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec-CCCc-eEEeeecCCCCCEEEEEecCCCCCCEEEEEECCC
Confidence 1 44556777766654444 58999998765555432 1111 111111 13 344444222 25788888764
Q ss_pred C
Q 044903 358 A 358 (387)
Q Consensus 358 ~ 358 (387)
+
T Consensus 406 g 406 (693)
T 3iuj_A 406 G 406 (693)
T ss_dssp C
T ss_pred C
Confidence 4
No 269
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.72 E-value=17 Score=36.10 Aligned_cols=92 Identities=10% Similarity=-0.054 Sum_probs=46.4
Q ss_pred eEEEEECCC-CceeeccccccCCC--CCcEEEEeCCeEEEEeC----CCCeEEEEeCCCCceEEccccccc----cCcee
Q 044903 264 EGAVYDVVA-NTWDDMREGMVRGW--RGPVAAMDEEVLYGIDE----NSCTLSKYDEVMDDWKEVVKSDLL----KGARH 332 (387)
Q Consensus 264 ~i~~yD~~~-~~W~~~~~~~~~~~--~~~~~~~~~g~ly~~g~----~~~~v~~yd~~~~~W~~v~~~~~~----~~~~~ 332 (387)
.+.++|+.+ .+-..+........ ...+. -.+..|++... ....|++||+++.+...+...... .....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 677788877 65443332100000 11122 23344555432 234699999998877665432211 11122
Q ss_pred EEEeCCeEEEEecCC--ceEEEEEec
Q 044903 333 AAAGGGRVCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 333 ~~~~~~~l~v~gg~~--~~i~v~d~~ 356 (387)
...-+|++++.+..+ ..++.+|..
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~~~ 368 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRIDSK 368 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEECSS
T ss_pred EECCCCeEEEEecCCCccEEEEEcCC
Confidence 344577766665544 356666654
No 270
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=89.41 E-value=18 Score=35.93 Aligned_cols=100 Identities=9% Similarity=-0.004 Sum_probs=50.4
Q ss_pred eEEEEeCCC-CccccCeEEcCCCCCCcccccceeEEEECCE-EEEEeeeC----CeEEEEECCCCceeeccccccCCCC-
Q 044903 215 SVEKWDLMN-GEKNSRWEKTGELKDGRFSREAIDAVGWKGK-LCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWR- 287 (387)
Q Consensus 215 ~v~vyd~~t-~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~-lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~- 287 (387)
.+.++|..+ .+ -..+......... -...+. -+|+ |++..... ..+..+|+.+.+...+-.....++.
T Consensus 264 ~l~~~d~~~~~~----~~~~~~~~~~~~~-~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 264 KLGVISPAEQAQ----TQWIDLGKEQDIY-LARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp EEEEECSSTTCC----CEEECCCSCSSEE-EEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCC
T ss_pred EEEEEECCCCCc----eEEecCCCCcceE-EEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCC
Confidence 678889888 76 4444311100000 011122 3444 44443311 5788899988877655321111110
Q ss_pred --CcEEEEeCCeEEEEeCCCC--eEEEEeCCCCceEEc
Q 044903 288 --GPVAAMDEEVLYGIDENSC--TLSKYDEVMDDWKEV 321 (387)
Q Consensus 288 --~~~~~~~~g~ly~~g~~~~--~v~~yd~~~~~W~~v 321 (387)
.......+|++++.+..++ .|+.+|.+.. ...+
T Consensus 338 ~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l 374 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL 374 (741)
T ss_dssp CCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES
T ss_pred cCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee
Confidence 1122234667666665555 5777787665 5444
No 271
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=89.22 E-value=13 Score=34.01 Aligned_cols=68 Identities=7% Similarity=-0.025 Sum_probs=39.1
Q ss_pred CCEEEEEeeeCCeEEEEECCC-Cce-eecccc--ccCC-------C---CC-cEEEEeCCeEEEEeCCCCeEEEEeCCCC
Q 044903 252 KGKLCLVNVKGAEGAVYDVVA-NTW-DDMREG--MVRG-------W---RG-PVAAMDEEVLYGIDENSCTLSKYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~-~~W-~~~~~~--~~~~-------~---~~-~~~~~~~g~ly~~g~~~~~v~~yd~~~~ 316 (387)
+|++.+.++. ..+.+||..+ .+- ..+... .... . .. ......+++..+.++.++.|.+||..+.
T Consensus 296 ~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 296 SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 5666666666 7999999975 321 111110 0000 0 00 0222335566677788899999999887
Q ss_pred ceEE
Q 044903 317 DWKE 320 (387)
Q Consensus 317 ~W~~ 320 (387)
+-..
T Consensus 375 ~~~~ 378 (447)
T 3dw8_B 375 RDIT 378 (447)
T ss_dssp CEEE
T ss_pred ccee
Confidence 6544
No 272
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=89.16 E-value=13 Score=33.85 Aligned_cols=179 Identities=10% Similarity=-0.003 Sum_probs=89.4
Q ss_pred CCccEEEeCCC--CceeeCCCCC---CC--ceeeeEEee---CC--EEEEEecCCCCCCCCCCceEEEE--eCCCCcccc
Q 044903 163 LTRPLIFDPIC--RTWTFGPELV---TP--RRWCAAGYS---RG--AVYVASGIGSQFSSDVAKSVEKW--DLMNGEKNS 228 (387)
Q Consensus 163 ~~~~~vydp~t--~~W~~l~~~~---~~--r~~~~~~~~---~~--~iyv~GG~~~~~~~~~~~~v~vy--d~~t~~~~~ 228 (387)
...+++||+.+ .+-+++.... .. -.-++.... ++ +|||+.-.. .-..+|+| |+.+..
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~------~~s~ielf~~d~~~~~--- 152 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG------SSSTVEVFKFQEEEKS--- 152 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST------TCCEEEEEEEETTTTE---
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC------CCCeEEEEEEECCCCE---
Confidence 45689999983 3555543211 11 112222222 24 578875431 12355665 454454
Q ss_pred CeEEcCCCCCCcccccceeEEEECCEEEEEeee----------------C-CeEEEEECCCCceeeccccccCCCCCcEE
Q 044903 229 RWEKTGELKDGRFSREAIDAVGWKGKLCLVNVK----------------G-AEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 229 ~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~----------------~-~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
...+......+..+-+-..+.-+|.+|+-+.. . ..++.||+. +.+.+...+... ..+
T Consensus 153 -~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~p---NGi 226 (355)
T 3sre_A 153 -LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFA---NGI 226 (355)
T ss_dssp -EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSE---EEE
T ss_pred -EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCccc---Ccc
Confidence 55444333333332333455568999886431 0 357778873 444443322221 223
Q ss_pred EEe--CCeEEEEeCCCCeEEEEeCCCC-ceEEccccccccCceeEE-Ee-CCeEEEEec-CCceEEEEEec
Q 044903 292 AMD--EEVLYGIDENSCTLSKYDEVMD-DWKEVVKSDLLKGARHAA-AG-GGRVCAVCE-NGGGIVVVDVK 356 (387)
Q Consensus 292 ~~~--~g~ly~~g~~~~~v~~yd~~~~-~W~~v~~~~~~~~~~~~~-~~-~~~l~v~gg-~~~~i~v~d~~ 356 (387)
+.. +..||+.+...+.|++||.+.+ +............+=.++ .. +|.+|+.+. ++..+..||+.
T Consensus 227 a~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 227 NISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred eECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 332 4479999876788999997643 333221111111122233 34 489999544 44555555655
No 273
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.98 E-value=6.1 Score=37.81 Aligned_cols=144 Identities=13% Similarity=0.085 Sum_probs=83.2
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE---------CCE-EEEEeeeC--
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW---------KGK-LCLVNVKG-- 262 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~---------~g~-lyv~gg~~-- 262 (387)
+++|||+-... ..+.+.|++++. -..+.......+. ......+ +|. ||+..-..
T Consensus 151 ~~~Lyv~~~~~--------~~i~~ID~~~~~----v~~l~~~~~~~~~--~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 151 KDHLYICYDGH--------KAIQLIDLKNRM----LSSPLNINTIPTN--RIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp EEEEEEEEETE--------EEEEEEETTTTE----EEEEECCTTSSCS--BEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCEEEEEECCC--------CeEEEEECCCCE----EEEEEccCccccC--CCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 46789885431 368889999988 7776544331121 1223333 554 88875433
Q ss_pred ----CeEEEEECCC-Ccee------eccccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCC-------CC-ceEEc
Q 044903 263 ----AEGAVYDVVA-NTWD------DMREGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEV-------MD-DWKEV 321 (387)
Q Consensus 263 ----~~i~~yD~~~-~~W~------~~~~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~-------~~-~W~~v 321 (387)
..+..++... ..|. .++. .. ....+++. ++.||+.....+.|++||++ +. .|+..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~---~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAA-YK---QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEE-ES---CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred cccCceEEEEecCCCCceeecccceeecc-CC---CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 3477787654 3564 2221 11 12334443 47899998878899999997 44 45432
Q ss_pred c-----------ccccccCceeEE-EeCCe-EEEEecCCceEEEEEec
Q 044903 322 V-----------KSDLLKGARHAA-AGGGR-VCAVCENGGGIVVVDVK 356 (387)
Q Consensus 322 ~-----------~~~~~~~~~~~~-~~~~~-l~v~gg~~~~i~v~d~~ 356 (387)
. ..+.....+.++ .-+|+ |||.-...+.|+.+|..
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 1 122222233344 33555 88886667889987765
No 274
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.51 E-value=13 Score=33.08 Aligned_cols=172 Identities=9% Similarity=0.034 Sum_probs=82.7
Q ss_pred CCCceeeCCCCCCCceeeeEEee-CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCC-CCCcccccceeEE
Q 044903 172 ICRTWTFGPELVTPRRWCAAGYS-RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL-KDGRFSREAIDAV 249 (387)
Q Consensus 172 ~t~~W~~l~~~~~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~-~~~~~~~~~~~~v 249 (387)
.-.+|+.+.. +......+.... .+.+|++|..+ .+...+-.-.+ |+.+... +.+.. ......
T Consensus 23 ~g~~W~~~~~-~~~~~~~~v~~~~~~~~~~~G~~g---------~i~~s~DgG~t----W~~~~~~~~~~~~--~~~~i~ 86 (327)
T 2xbg_A 23 DYNPWEAIQL-PTTATILDMSFIDRHHGWLVGVNA---------TLMETRDGGQT----WEPRTLVLDHSDY--RFNSVS 86 (327)
T ss_dssp SSCCEEEEEC-SCSSCEEEEEESSSSCEEEEETTT---------EEEEESSTTSS----CEECCCCCSCCCC--EEEEEE
T ss_pred CCCCceEeec-CCCCcEEEEEECCCCcEEEEcCCC---------eEEEeCCCCCC----CeECCCCCCCCCc--cEEEEE
Confidence 3457887652 222223333333 45778865321 12222112234 9998632 11111 112333
Q ss_pred EECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEcccccccc
Q 044903 250 GWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLK 328 (387)
Q Consensus 250 ~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~ 328 (387)
..++.+|++|..+ .++.-+=.-.+|+.+.......-....++ ..++++|+.+. .+.+++-+-...+|+.+..... .
T Consensus 87 ~~~~~~~~~g~~g-~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~DgG~tW~~~~~~~~-~ 163 (327)
T 2xbg_A 87 FQGNEGWIVGEPP-IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDSGKNWQALVQEAI-G 163 (327)
T ss_dssp EETTEEEEEEETT-EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESSTTSSEEEEECSCC-C
T ss_pred ecCCeEEEEECCC-eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCCCCCCEEeecCCC-c
Confidence 4567888876433 23332112458998864211110111232 35678888774 5667666555778999864322 1
Q ss_pred CceeEEE-eCCeEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 329 GARHAAA-GGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 329 ~~~~~~~-~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
..+.++. .++.+++++ ..+.++..+.. .+..|+.
T Consensus 164 ~~~~~~~~~~~~~~~~g-~~G~~~~S~d~---gG~tW~~ 198 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVS-SRGSFYSTWEP---GQTAWEP 198 (327)
T ss_dssp CEEEEEECTTSCEEEEE-TTSSEEEEECT---TCSSCEE
T ss_pred ceEEEEEcCCCcEEEEE-CCCcEEEEeCC---CCCceeE
Confidence 2233333 356777664 33445544322 1246775
No 275
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=87.98 E-value=1.7 Score=39.45 Aligned_cols=111 Identities=9% Similarity=-0.022 Sum_probs=60.3
Q ss_pred CCEEEEEeeeCCeEEEEECCCC--ceeecccc--ccCCCCCcEEEEeCCeEEEEe-CCCCeEEEEeCCCCceEEcccccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVAN--TWDDMREG--MVRGWRGPVAAMDEEVLYGID-ENSCTLSKYDEVMDDWKEVVKSDL 326 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~--~W~~~~~~--~~~~~~~~~~~~~~g~ly~~g-~~~~~v~~yd~~~~~W~~v~~~~~ 326 (387)
+|.+|+.+ ....++++|.+++ .|+.-... .+.....+.. ..++.+|++. ..+|.++.+|.++..|+.-...+.
T Consensus 10 ~~~V~v~t-~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~-~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAAD-VEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSR-LETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEE-TTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCT-TTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEe-CCCeEEEEECCCCcEEEEecCCccCCcEEecCCcc-ccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 44455443 3346788887765 68854331 1111111111 1356788876 468999999998776654323322
Q ss_pred ccC--cee----EEE------eCCeEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 327 LKG--ARH----AAA------GGGRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 327 ~~~--~~~----~~~------~~~~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
... ++. -+. ..+..+++|..+..++.+|..++ -..|+.
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG--~~~W~~ 137 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG--EIISAF 137 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC--CEEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC--cEEEEE
Confidence 211 111 112 14455556567788999998843 356876
No 276
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=87.96 E-value=23 Score=35.21 Aligned_cols=143 Identities=8% Similarity=-0.051 Sum_probs=72.3
Q ss_pred CccEEEeCCCCcee--eCCCCCC-CceeeeEE-eeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCC
Q 044903 164 TRPLIFDPICRTWT--FGPELVT-PRRWCAAG-YSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDG 239 (387)
Q Consensus 164 ~~~~vydp~t~~W~--~l~~~~~-~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~ 239 (387)
..+++++..|.+-. .+...+. +....... .-+++..++..... .....++++|..+.+ |..+..-...
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~----~~~~~l~~~~~~~~~----~~~l~~~~~~ 273 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG----WSENDVYWKRPGEKD----FRLLVKGVGA 273 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET----TTEEEEEEECTTCSS----CEEEEECSSC
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC----CCceEEEEEcCCCCc----eEEeecCCCc
Confidence 45888888877532 2222111 11112222 22444333332211 023356677776667 8777532221
Q ss_pred cccccceeEEEECCEEEEEeeeC---CeEEEEECCCCc---eeeccccccCCCCCcEEEEeCCeEEEEeCCCC--eEEEE
Q 044903 240 RFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVANT---WDDMREGMVRGWRGPVAAMDEEVLYGIDENSC--TLSKY 311 (387)
Q Consensus 240 ~~~~~~~~~v~~~g~lyv~gg~~---~~i~~yD~~~~~---W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~--~v~~y 311 (387)
. ...+.-+|.+|+.+..+ ..+..+|+.+.. |+.+-..-+ ...-..++..++++++....++ .|+.+
T Consensus 274 ~-----~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 274 K-----YEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS-SASLLSVSIVGGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp C-----EEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred e-----EEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 1 22233577766664422 688999987654 877643211 1111233445788888765555 47777
Q ss_pred eCCCCceEE
Q 044903 312 DEVMDDWKE 320 (387)
Q Consensus 312 d~~~~~W~~ 320 (387)
|.+...-..
T Consensus 348 ~~~g~~~~~ 356 (695)
T 2bkl_A 348 TLKGKPVRT 356 (695)
T ss_dssp ETTCCEEEE
T ss_pred eCCCCeeEE
Confidence 875543333
No 277
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=87.26 E-value=16 Score=37.84 Aligned_cols=104 Identities=10% Similarity=-0.108 Sum_probs=56.8
Q ss_pred ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEcc-------
Q 044903 251 WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVV------- 322 (387)
Q Consensus 251 ~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~------- 322 (387)
..|++.+.++.+..+.++|+.+.+-...-. ..+ .-.+++ ..+++..+.+..++.|.+||.++..-....
T Consensus 67 spg~~L~S~s~D~~v~lWd~~~~~~~~~~~--~~~-~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~ 143 (902)
T 2oaj_A 67 VKGIYLVVINAKDTVYVLSLYSQKVLTTVF--VPG-KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKS 143 (902)
T ss_dssp ETTTEEEEEETTCEEEEEETTTCSEEEEEE--CSS-CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHH
T ss_pred cCCCEEEEEECcCeEEEEECCCCcEEEEEc--CCC-CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccccc
Confidence 346644445555789999998764321111 011 011222 124566667778899999999887543211
Q ss_pred --ccccccCc-eeEEEe--CCeEEEEecCCceEEEEEecCC
Q 044903 323 --KSDLLKGA-RHAAAG--GGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 323 --~~~~~~~~-~~~~~~--~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
........ .+++.. ++.++++|..++.+ +||+...
T Consensus 144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~ 183 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN 183 (902)
T ss_dssp HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT
T ss_pred ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC
Confidence 01111122 223333 33677777777788 9998754
No 278
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=87.13 E-value=14 Score=33.31 Aligned_cols=133 Identities=11% Similarity=0.052 Sum_probs=70.3
Q ss_pred eEEEEeCCCCccccCeEEcCCCCCCcccccceeEEE--ECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEE-
Q 044903 215 SVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVG--WKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVA- 291 (387)
Q Consensus 215 ~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~--~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~- 291 (387)
.+.++|+.+.+ -......... ...+. -+|++.+.+. ...+.+++..++.-............-.++
T Consensus 158 ~i~iwd~~~~~----~~~~~~~~~~------V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~ 226 (365)
T 4h5i_A 158 IMRIIDPSDLT----EKFEIETRGE------VKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKTDFDKNWSLSKIN 226 (365)
T ss_dssp EEEEEETTTTE----EEEEEECSSC------CCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEECCCCTTEEEEEEE
T ss_pred EEEEeECCCCc----EEEEeCCCCc------eEEEEEccCCceEEecc-ceeEEEEEeccCcceeeeecCCCCCCEEEEE
Confidence 78889998877 3322211111 11222 2566655544 346777777666543221111111001112
Q ss_pred EEeCCeEEEEeCCCC----eEEEEeCCCCceEEccc--cccccCce--eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 292 AMDEEVLYGIDENSC----TLSKYDEVMDDWKEVVK--SDLLKGAR--HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 292 ~~~~g~ly~~g~~~~----~v~~yd~~~~~W~~v~~--~~~~~~~~--~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
...+++.++.+..++ .++.||........... ........ ..+..+|++++.|+.++.|.+||+.+.
T Consensus 227 fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 234566666554333 47788887766554332 22222222 233458899999888999999999854
No 279
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=86.70 E-value=18 Score=32.65 Aligned_cols=104 Identities=15% Similarity=0.073 Sum_probs=51.7
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEee--CCEEEEEecCCCC-CCCCCCceEEEEeCCCCccccCeEEcCCCCCCc
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYS--RGAVYVASGIGSQ-FSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGR 240 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~--~~~iyv~GG~~~~-~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~ 240 (387)
..+++||+.+.+-.. .++..... ..+.. +..+||....... ..+.....+.+||..+.+. -..++ ++..+
T Consensus 31 ~~v~v~D~~t~~~~~--~i~~g~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~---~~~i~-~~~~~ 103 (361)
T 2oiz_A 31 SRVHVYDYTNGKFLG--MVPTAFNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF---EKEIS-LPPKR 103 (361)
T ss_dssp CEEEEEETTTCCEEE--EEECCEEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE---EEEEE-ECTTB
T ss_pred CeEEEEECCCCeEEE--EecCCCCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE---EEEEE-cCccc
Confidence 467899988876543 22222222 22222 4578988632110 0112234789999987651 22222 11110
Q ss_pred c--ccccee-EEEECC-EEEEEeee-CCeEEEEECCCCc
Q 044903 241 F--SREAID-AVGWKG-KLCLVNVK-GAEGAVYDVVANT 274 (387)
Q Consensus 241 ~--~~~~~~-~v~~~g-~lyv~gg~-~~~i~~yD~~~~~ 274 (387)
. ....+. ++.-+| .+|+.... ...+.++|+++++
T Consensus 104 ~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~ 142 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD 142 (361)
T ss_dssp CCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE
T ss_pred cccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc
Confidence 0 000011 222245 57776544 4688999998764
No 280
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=86.44 E-value=26 Score=34.26 Aligned_cols=185 Identities=13% Similarity=-0.029 Sum_probs=99.8
Q ss_pred CCccEEEeCCCCceeeCCCCCCCceeeeEEe----eCCEEEEEecCCCC---------CCCCCCceEEEEeCCCCccccC
Q 044903 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGY----SRGAVYVASGIGSQ---------FSSDVAKSVEKWDLMNGEKNSR 229 (387)
Q Consensus 163 ~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~----~~~~iyv~GG~~~~---------~~~~~~~~v~vyd~~t~~~~~~ 229 (387)
...+.+.|+.+.+-.++-.+|....-+..+. -++.+|+.+-...+ ........+-+.|..+.+..
T Consensus 111 ~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~-- 188 (595)
T 1fwx_A 111 NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVA-- 188 (595)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEE--
T ss_pred CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEE--
Confidence 4678999999988665334554333444443 35678887633210 01133457788999987744
Q ss_pred eEEcC-CCCCCcccccceeEEEECC-EEEEEeeeC-------------------------------------CeEEEEEC
Q 044903 230 WEKTG-ELKDGRFSREAIDAVGWKG-KLCLVNVKG-------------------------------------AEGAVYDV 270 (387)
Q Consensus 230 W~~~~-~~~~~~~~~~~~~~v~~~g-~lyv~gg~~-------------------------------------~~i~~yD~ 270 (387)
|.-.- .-|+ ...+..+| .+|+..... +.+-+.|.
T Consensus 189 ~qI~Vgg~pd-------~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~ 261 (595)
T 1fwx_A 189 WQVLVSGNLD-------NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDG 261 (595)
T ss_dssp EEEEESSCCC-------CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEEC
T ss_pred EEEEeCCCcc-------ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeC
Confidence 65332 1111 11222233 334332111 34677788
Q ss_pred CCCceee-ccccccCCCCCcEEE-Ee-CCeEEEEeCCCCeEEEEeCCCCc-e---------EEccccccccC-ceeEEEe
Q 044903 271 VANTWDD-MREGMVRGWRGPVAA-MD-EEVLYGIDENSCTLSKYDEVMDD-W---------KEVVKSDLLKG-ARHAAAG 336 (387)
Q Consensus 271 ~~~~W~~-~~~~~~~~~~~~~~~-~~-~g~ly~~g~~~~~v~~yd~~~~~-W---------~~v~~~~~~~~-~~~~~~~ 336 (387)
.+.+... +.. .+.+-.-+.+. .- |..+|+.+..+..+.+||.++.+ + ..+...+.-.+ .+..+.-
T Consensus 262 ~~~~~~~~~~~-Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~ 340 (595)
T 1fwx_A 262 RKEASSLFTRY-IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDG 340 (595)
T ss_dssp SGGGCCSSEEE-EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECT
T ss_pred cccCCceeEEE-EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECC
Confidence 7743322 111 11121122222 23 44577777777899999998542 1 11122222233 3445555
Q ss_pred CCeEEEEecCCceEEEEEecC
Q 044903 337 GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 337 ~~~l~v~gg~~~~i~v~d~~~ 357 (387)
+|.+|+...-++++.+||+.+
T Consensus 341 dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 341 RGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TSEEEEEETTTTEEEEEEHHH
T ss_pred CCeEEEEEecCCcEEEEEhhH
Confidence 678999877789999999875
No 281
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=85.22 E-value=15 Score=30.50 Aligned_cols=147 Identities=16% Similarity=0.099 Sum_probs=74.9
Q ss_pred EeCCEEEEEcCccCCCCCCCCccEEEeCCCCceee------CCCCCCCceeeeEEe-eCCEEEEEecCCCCCCCCCCceE
Q 044903 144 SLSGKLILLAATTHNFNPALTRPLIFDPICRTWTF------GPELVTPRRWCAAGY-SRGAVYVASGIGSQFSSDVAKSV 216 (387)
Q Consensus 144 ~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~------l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~v 216 (387)
..+|.+|++-| ..+|.++.....+.. -+.+|... .++... .++++|++-|. .+
T Consensus 31 ~~~g~~y~Fkg---------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~i-DAa~~~~~~~~iyfFkG~----------~~ 90 (207)
T 1pex_A 31 SLRGETMIFKD---------RFFWRLHPQQVDAELFLTKSFWPELPNRI-DAAYEHPSHDLIFIFRGR----------KF 90 (207)
T ss_dssp EETTEEEEEET---------TEEEEECSSSSCCEEEEHHHHCTTSCSSC-CEEEEETTTTEEEEEETT----------EE
T ss_pred eCCCcEEEEEC---------CEEEEEeCCCcCCCceehhHhccCCCCCc-cEEEEeccCCcEEEEccC----------EE
Confidence 37899999977 345666654322211 02233221 111111 25899988663 34
Q ss_pred EEEeCCCCccccCe-EEcCCCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCCceee-----cc---ccccC
Q 044903 217 EKWDLMNGEKNSRW-EKTGELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDD-----MR---EGMVR 284 (387)
Q Consensus 217 ~vyd~~t~~~~~~W-~~~~~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~---~~~~~ 284 (387)
++|+..+-... + +.+..+..+.. .....||+. +|++|++-| ...+.||..+++=.. +. .+++.
T Consensus 91 w~~~~~~~~~g--yPk~I~~~GlP~~-~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~ 165 (207)
T 1pex_A 91 WALNGYDILEG--YPKKISELGLPKE-VKKISAAVHFEDTGKTLLFSG--NQVWRYDDTNHIMDKDYPRLIEEDFPGIGD 165 (207)
T ss_dssp EEESTTCCCTT--CSEESTTTTCCTT-CCCCCEEEECTTTSEEEEEET--TEEEEEETTTTEECSSCCCBHHHHSTTSCS
T ss_pred EEEeCCeeccC--CceeccccCCCCC-CccccEEEEeCCCCEEEEEeC--CEEEEEeCcCccccCCCCccHHHcCCCCCC
Confidence 55553222100 1 22322211110 012344443 489999865 477999987543110 00 11111
Q ss_pred CCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceE
Q 044903 285 GWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWK 319 (387)
Q Consensus 285 ~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~ 319 (387)
.-.++...+|++|++- ....++||..+++=.
T Consensus 166 --~iDaAf~~~g~~YfFk--g~~y~rf~~~~~~v~ 196 (207)
T 1pex_A 166 --KVDAVYEKNGYIYFFN--GPIQFEYSIWSNRIV 196 (207)
T ss_dssp --CCSEEEEETTEEEEEE--TTEEEEEETTTTEEE
T ss_pred --CccEEEEcCCcEEEEE--CCEEEEEeCCccEEe
Confidence 1234445688999995 457999999876533
No 282
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=84.96 E-value=5.9 Score=36.23 Aligned_cols=105 Identities=8% Similarity=-0.032 Sum_probs=56.8
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCceEEcccc-----
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMD-EE-VLYGIDENSCTLSKYDEVMDDWKEVVKS----- 324 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~-~g-~ly~~g~~~~~v~~yd~~~~~W~~v~~~----- 324 (387)
+|++.+-++.+..+.++|+.++.=..... .......+++.. ++ .+.+.++.++.|.+||..+.+-......
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~ 232 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGY--PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK 232 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEE--ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CS
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeec--CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcc
Confidence 67888888888889999986553211111 111111233333 33 4667777889999999877643221100
Q ss_pred ----------cc--------ccCce-eEE--EeCCeEEEEecCCceEEEEEecCC
Q 044903 325 ----------DL--------LKGAR-HAA--AGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 325 ----------~~--------~~~~~-~~~--~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+. ..... .+. ..+++.++.+..++.+.+||+...
T Consensus 233 ~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~ 287 (393)
T 4gq1_A 233 NPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFAN 287 (393)
T ss_dssp CCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---
T ss_pred cceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccC
Confidence 00 00111 122 246777777777889999998744
No 283
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=84.15 E-value=31 Score=34.48 Aligned_cols=145 Identities=9% Similarity=-0.054 Sum_probs=79.4
Q ss_pred CCccEEEeCCCC--c-eeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCC--CccccCeEEcCCCC
Q 044903 163 LTRPLIFDPICR--T-WTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMN--GEKNSRWEKTGELK 237 (387)
Q Consensus 163 ~~~~~vydp~t~--~-W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t--~~~~~~W~~~~~~~ 237 (387)
..+++++|..+. + |+.+.+-....... ....++.||+....+. ....+.++|..+ .. |..+-+-.
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~-----~~~~l~~~d~~~~~~~----~~~l~~~~ 362 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA-----PLKKIVRVDLSGSTPR----FDTVVPES 362 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC-----TTCEEEEEECSSSSCE----EEEEECCC
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC-----CCCEEEEEeCCCCccc----cEEEecCC
Confidence 457888998877 6 88775433222222 2345677877754321 134688889877 56 98875322
Q ss_pred CCcccccceeEEEECCEEEEEeeeC--CeEEEEECCCCceeeccccccCCCCCcEEEE--eCCeEEEEeC---CCCeEEE
Q 044903 238 DGRFSREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM--DEEVLYGIDE---NSCTLSK 310 (387)
Q Consensus 238 ~~~~~~~~~~~v~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~--~~g~ly~~g~---~~~~v~~ 310 (387)
... .......++.+++..... ..++++|+..+.-+.+.. ...+. ...+.. .++.|++... ..+.++.
T Consensus 363 ~~~----l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~-v~~~~~s~d~~~l~~~~ss~~~P~~i~~ 436 (741)
T 1yr2_A 363 KDN----LESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGS-ASGLSGRPGDRHAYLSFSSFTQPATVLA 436 (741)
T ss_dssp SSE----EEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCE-EEEEECCBTCSCEEEEEEETTEEEEEEE
T ss_pred CCe----EEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeE-EEEeecCCCCCEEEEEEcCCCCCCEEEE
Confidence 211 112234478887775554 567788875543344331 00110 011111 1234554432 2357999
Q ss_pred EeCCCCceEEccc
Q 044903 311 YDEVMDDWKEVVK 323 (387)
Q Consensus 311 yd~~~~~W~~v~~ 323 (387)
||.++.+.+.+..
T Consensus 437 ~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 437 LDPATAKTTPWEP 449 (741)
T ss_dssp EETTTTEEEECSC
T ss_pred EECCCCcEEEEec
Confidence 9999887766643
No 284
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=84.08 E-value=24 Score=31.97 Aligned_cols=147 Identities=14% Similarity=0.041 Sum_probs=77.0
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCe-EEcCCCCCCcccccceeEEEECCEEEEEe------------ee
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRW-EKTGELKDGRFSREAIDAVGWKGKLCLVN------------VK 261 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W-~~~~~~~~~~~~~~~~~~v~~~g~lyv~g------------g~ 261 (387)
++.+++-|+.+. .+.++|+.+++ - ..+..-...... ..+.+..-+|++.+.+ ..
T Consensus 192 ~~~~LaSgS~D~--------TIkIWDl~TGk----~l~tL~g~~~~v~~-v~~vafSpdG~~lvs~s~~~~~w~laSGs~ 258 (356)
T 2w18_A 192 MQEALLGTTIMN--------NIVIWNLKTGQ----LLKKMHIDDSYQAS-VCHKAYSEMGLLFIVLSHPCAKESESLRSP 258 (356)
T ss_dssp STTEEEEEETTS--------EEEEEETTTCC----EEEEEECCC---CC-CEEEEEEETTEEEEEEC------------C
T ss_pred CCceEEEecCCC--------cEEEEECCCCc----EEEEEcCCCcceee-eEEEEECCCCCEEEEeccCCCcceeeccCC
Confidence 446666666544 88999999987 3 232210000000 0011233467765432 22
Q ss_pred CCeEEEEECCCCceeecc-ccccCCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccC-ce--eEEEe
Q 044903 262 GAEGAVYDVVANTWDDMR-EGMVRGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKG-AR--HAAAG 336 (387)
Q Consensus 262 ~~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~-~~--~~~~~ 336 (387)
...+..+|+.+..-..+- ..++.+.....+. -.++.+.+-+..++.|.+||..+.+-.. .+..... .. .+..-
T Consensus 259 D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~--tL~gH~~~vvs~vafSP 336 (356)
T 2w18_A 259 VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTA--LLPPVSDQHWSFVKWSG 336 (356)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEE--EECCC--CCCCEEEECS
T ss_pred CcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEE--EecCCCCCeEEEEEECC
Confidence 266777888766432211 0012222111111 1113345555678899999999886443 2222211 12 23455
Q ss_pred CCeEEEEecCCceEEEEEec
Q 044903 337 GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 337 ~~~l~v~gg~~~~i~v~d~~ 356 (387)
+|+.++.|+.+..|.+||..
T Consensus 337 DG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 337 TDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SSSEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEEECCCcEEEecCC
Confidence 88888888888999999863
No 285
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=83.99 E-value=6.5 Score=33.24 Aligned_cols=65 Identities=11% Similarity=-0.060 Sum_probs=39.0
Q ss_pred eeEEEE---CCEEEEEeeeCCeEEEEECCCCceeecc----ccccC------CCCCcEEEE--eCCeEEEEeCCCCeEEE
Q 044903 246 IDAVGW---KGKLCLVNVKGAEGAVYDVVANTWDDMR----EGMVR------GWRGPVAAM--DEEVLYGIDENSCTLSK 310 (387)
Q Consensus 246 ~~~v~~---~g~lyv~gg~~~~i~~yD~~~~~W~~~~----~~~~~------~~~~~~~~~--~~g~ly~~g~~~~~v~~ 310 (387)
..+|.. ++++|++-| ...+.||...++-..-+ .+++. ...-.++.. .++++|++-+ ...++
T Consensus 118 IDAA~~~~~~gk~yfFkG--~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG--~~ywr 193 (225)
T 3oyo_A 118 IDSAFRSTKGKEVYLFKG--NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG--QNYVR 193 (225)
T ss_dssp CCEEEECSSTTEEEEEET--TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET--TEEEE
T ss_pred cceEEEECCCCcEEEEeC--CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC--CEEEE
Confidence 445543 689999965 46789997665443211 11111 111223333 3689999964 57999
Q ss_pred EeCC
Q 044903 311 YDEV 314 (387)
Q Consensus 311 yd~~ 314 (387)
||..
T Consensus 194 ~d~~ 197 (225)
T 3oyo_A 194 IDFT 197 (225)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9997
No 286
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=83.98 E-value=26 Score=32.21 Aligned_cols=104 Identities=11% Similarity=0.168 Sum_probs=58.1
Q ss_pred CCEEEEEeeeCCeEEEEECCCC------ceeecc-----ccc-cCCCCCcEEEEeCCeEEEEeCC---------CCeEEE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVAN------TWDDMR-----EGM-VRGWRGPVAAMDEEVLYGIDEN---------SCTLSK 310 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~------~W~~~~-----~~~-~~~~~~~~~~~~~g~ly~~g~~---------~~~v~~ 310 (387)
+|+++++.. +..++++|..++ .|.... .+. +.++...++--.++++|+.-.. .+.|++
T Consensus 237 dG~~~~vs~-~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 237 AGRLVWPTY-TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTEEEEEBT-TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCcEEEEeC-CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 666655433 246777777544 454211 122 2222222222246789996421 246999
Q ss_pred EeCCCCceEEccccccccCcee-EEEeCCe--EEEEecCCceEEEEEecCC
Q 044903 311 YDEVMDDWKEVVKSDLLKGARH-AAAGGGR--VCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 311 yd~~~~~W~~v~~~~~~~~~~~-~~~~~~~--l~v~gg~~~~i~v~d~~~~ 358 (387)
+|+++.+-..--..+ ..... .+.-+++ +|+..+.++.+.|||..+.
T Consensus 316 iD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 316 LDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp EETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred EECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 999887654432222 22222 3344554 6777777899999999865
No 287
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=83.57 E-value=26 Score=31.86 Aligned_cols=192 Identities=10% Similarity=-0.068 Sum_probs=87.8
Q ss_pred eCCEEEEEcCccCC--CCCCCCccEEEeCCCCceee---CC-CC-----CCCceeeeEEeeCCEEEEEecCCCCCCCCCC
Q 044903 145 LSGKLILLAATTHN--FNPALTRPLIFDPICRTWTF---GP-EL-----VTPRRWCAAGYSRGAVYVASGIGSQFSSDVA 213 (387)
Q Consensus 145 ~~~~l~v~GG~~~~--~~~~~~~~~vydp~t~~W~~---l~-~~-----~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 213 (387)
-+..+|+..-.... .....+.+.+||+.|.+-.. ++ +. ..|+ ..+...-+..+||..-. ..
T Consensus 76 Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~~l~v~n~~-------~~ 147 (373)
T 2mad_H 76 SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNADLLFFQFA-------AG 147 (373)
T ss_pred CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCCEEEEEecC-------CC
Confidence 34567776421110 01123567899998765432 22 00 1122 22223345678887422 12
Q ss_pred ceEEEEeCCCCccccCeEEcCC-CCCCcccccceeEEE-ECCEEEEEeeeCCeEEEEECCCCcee-ecc--ccccCC--C
Q 044903 214 KSVEKWDLMNGEKNSRWEKTGE-LKDGRFSREAIDAVG-WKGKLCLVNVKGAEGAVYDVVANTWD-DMR--EGMVRG--W 286 (387)
Q Consensus 214 ~~v~vyd~~t~~~~~~W~~~~~-~~~~~~~~~~~~~v~-~~g~lyv~gg~~~~i~~yD~~~~~W~-~~~--~~~~~~--~ 286 (387)
+.+.++| .+++ =. .. ++.+. +.... .+.+.|+.......+..+|. +.+-. ... ...... .
T Consensus 148 ~~v~viD-~t~~----~~--~~~i~~~~-----~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 148 PAVGLVV-QGGS----SD--DQLLSSPT-----CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred CeEEEEE-CCCC----EE--eEEcCCCc-----eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 4789999 8776 32 22 22221 11111 23344443222345666666 43211 111 001000 0
Q ss_pred -CCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccc-----------cccCc--eeEEEeCCeEEEEecC------
Q 044903 287 -RGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSD-----------LLKGA--RHAAAGGGRVCAVCEN------ 346 (387)
Q Consensus 287 -~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~-----------~~~~~--~~~~~~~~~l~v~gg~------ 346 (387)
..+.....++++|+.. ..+.+++.|..+..-+.+...+ ...+. .++..-++++||...+
T Consensus 215 ~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~ 293 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKL 293 (373)
T ss_pred eecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccc
Confidence 0112223355666665 4567888888654322221110 01111 2233345789997542
Q ss_pred ---CceEEEEEecCC
Q 044903 347 ---GGGIVVVDVKAA 358 (387)
Q Consensus 347 ---~~~i~v~d~~~~ 358 (387)
++.++++|..+.
T Consensus 294 ~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 294 HAAAKEVTSVTGLVG 308 (373)
T ss_pred cCCCCeEEEEECCCC
Confidence 357999999854
No 288
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=83.20 E-value=26 Score=31.52 Aligned_cols=64 Identities=6% Similarity=-0.069 Sum_probs=40.3
Q ss_pred eCCeEEEEeCCC-CeEEEEeCCCCc---eEEcccc-ccccCceeEEEe-CCeEEEEecCCceEEEEEecC
Q 044903 294 DEEVLYGIDENS-CTLSKYDEVMDD---WKEVVKS-DLLKGARHAAAG-GGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 294 ~~g~ly~~g~~~-~~v~~yd~~~~~---W~~v~~~-~~~~~~~~~~~~-~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.+|.+|+.+... +.|+++|++... |-.-.+. +...+..+++.. +|+++|+...++.++.+|+..
T Consensus 146 ~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 146 RDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp TTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 357899988767 889999998763 4221111 112223456655 565555545588899999873
No 289
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=82.36 E-value=27 Score=31.21 Aligned_cols=137 Identities=11% Similarity=0.062 Sum_probs=65.7
Q ss_pred ceEEEEeCC-CCccccCeEEcCCC--CC-CcccccceeEEEECC-EEEEEeeeCCeEEEEEC--CCCcee----eccccc
Q 044903 214 KSVEKWDLM-NGEKNSRWEKTGEL--KD-GRFSREAIDAVGWKG-KLCLVNVKGAEGAVYDV--VANTWD----DMREGM 282 (387)
Q Consensus 214 ~~v~vyd~~-t~~~~~~W~~~~~~--~~-~~~~~~~~~~v~~~g-~lyv~gg~~~~i~~yD~--~~~~W~----~~~~~~ 282 (387)
..+.+||.. +++ ...+..+ +. .... .+.+..-+| .+|+.+.....+.+|+. ++++.. .+.. +
T Consensus 167 ~~v~~~~~~~~g~----~~~~~~~~~~~~g~~p--~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~-~ 239 (365)
T 1jof_A 167 NKLWTHRKLASGE----VELVGSVDAPDPGDHP--RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPL-I 239 (365)
T ss_dssp TEEEEEEECTTSC----EEEEEEEECSSTTCCE--EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEES-S
T ss_pred CEEEEEEECCCCC----EEEeeeEecCCCCCCC--CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEc-C
Confidence 378889987 666 5443222 11 1100 011222255 57776544466777654 355442 2221 2
Q ss_pred cCCC---C-------Cc-EEE-E-eCC-eEEEEeCCCC-----eEEEEeCC-CCceEEccc-cc-cc--cCceeEEE---
Q 044903 283 VRGW---R-------GP-VAA-M-DEE-VLYGIDENSC-----TLSKYDEV-MDDWKEVVK-SD-LL--KGARHAAA--- 335 (387)
Q Consensus 283 ~~~~---~-------~~-~~~-~-~~g-~ly~~g~~~~-----~v~~yd~~-~~~W~~v~~-~~-~~--~~~~~~~~--- 335 (387)
+.+. . .+ .++ + .+| .||+.....+ .|.+|+.+ +.+.+.+.. .+ .. -...++..
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~ 319 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPW 319 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTT
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCc
Confidence 2111 1 12 222 2 244 5776543222 79999875 455554321 11 11 11233333
Q ss_pred eCCeEEEEecCCceEEEEEecC
Q 044903 336 GGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 336 ~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
-+..|++.+..++.+.+|+.+.
T Consensus 320 dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 320 SDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp CTTEEEEECSSSCEEEEEEEET
T ss_pred CCCEEEEEEcCCCeEEEEEEch
Confidence 2455666655568899998874
No 290
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=82.26 E-value=42 Score=33.31 Aligned_cols=200 Identities=10% Similarity=0.065 Sum_probs=97.9
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEee-CC-EEEEEecCCCC-------CCCCCCce
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RG-AVYVASGIGSQ-------FSSDVAKS 215 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~-~iyv~GG~~~~-------~~~~~~~~ 215 (387)
-+|+.++++.... ......++++|..+++......... . ....+-. ++ .||........ ........
T Consensus 134 PDg~~la~~~~~~--G~~~~~i~v~d~~tg~~~~~~~~~~-~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 134 EDGEYFAYGLSAS--GSDWVTIKFMKVDGAKELPDVLERV-K-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp TTSSEEEEEEEET--TCSCEEEEEEETTTTEEEEEEEEEE-C-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred CCCCEEEEEEcCC--CCceEEEEEEECCCCCCCcccccCc-c-cceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 4666555543222 1122378999999998776321110 1 1112222 34 45444322110 00122346
Q ss_pred EEEEeCCCCccccCeE--EcCCCCC-CcccccceeEEEECCEEEEEeee-----CCeEEEEECCC------C--ceeecc
Q 044903 216 VEKWDLMNGEKNSRWE--KTGELKD-GRFSREAIDAVGWKGKLCLVNVK-----GAEGAVYDVVA------N--TWDDMR 279 (387)
Q Consensus 216 v~vyd~~t~~~~~~W~--~~~~~~~-~~~~~~~~~~v~~~g~lyv~gg~-----~~~i~~yD~~~------~--~W~~~~ 279 (387)
+.+++..+++ -. .+...+. +.. .......-+|+..++... ...++++|..+ . .++.+.
T Consensus 210 v~~~~l~t~~----~~~~~v~~~~~~~~~--~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 210 LYYHVLGTDQ----SEDILCAEFPDEPKW--MGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp EEEEETTSCG----GGCEEEECCTTCTTC--EEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred EEEEECCCCc----ccceEEeccCCCCeE--EEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 7888888776 32 2211111 110 001122335654333332 35788888876 4 577665
Q ss_pred ccccCCCCCcEEEEeCCeEEEEeCC---CCeEEEEeCCCC---ceEEccccccccCceeEEEe-CCeEEEEecCC--ceE
Q 044903 280 EGMVRGWRGPVAAMDEEVLYGIDEN---SCTLSKYDEVMD---DWKEVVKSDLLKGARHAAAG-GGRVCAVCENG--GGI 350 (387)
Q Consensus 280 ~~~~~~~~~~~~~~~~g~ly~~g~~---~~~v~~yd~~~~---~W~~v~~~~~~~~~~~~~~~-~~~l~v~gg~~--~~i 350 (387)
..... ........|+.||+.... ...|+++|.++. .|+.+...........+... ++++++....+ ..+
T Consensus 284 ~~~~~--~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l 361 (710)
T 2xdw_A 284 DNFEG--EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTL 361 (710)
T ss_dssp CSSSS--CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEE
T ss_pred CCCCc--EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEE
Confidence 32211 112233456788888753 346999998775 58876543211111123334 67777765443 357
Q ss_pred EEEEec
Q 044903 351 VVVDVK 356 (387)
Q Consensus 351 ~v~d~~ 356 (387)
+++|..
T Consensus 362 ~~~~~~ 367 (710)
T 2xdw_A 362 QLHDLA 367 (710)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 888874
No 291
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=82.11 E-value=4.8 Score=37.17 Aligned_cols=102 Identities=10% Similarity=-0.032 Sum_probs=59.4
Q ss_pred CCEEEEEeee----CCeEEEEECCCCcee-eccccccCCCCCcEEEEe--CCeEEEEeC---------CCCeEEEEeCCC
Q 044903 252 KGKLCLVNVK----GAEGAVYDVVANTWD-DMREGMVRGWRGPVAAMD--EEVLYGIDE---------NSCTLSKYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~----~~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~~--~g~ly~~g~---------~~~~v~~yd~~~ 315 (387)
+.++|+.... ...+.++|+.+.+=. +++. +... .+++. +..+|+... .++.|.+||+++
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v----G~~P-~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG----GFLP-NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE----CSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC----CCCC-cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 5678888654 368899999876532 2322 2222 23332 446888752 235699999998
Q ss_pred CceEEcccccc------ccCceeE-EE-eCCeEEEEecC-CceEEEEEecCC
Q 044903 316 DDWKEVVKSDL------LKGARHA-AA-GGGRVCAVCEN-GGGIVVVDVKAA 358 (387)
Q Consensus 316 ~~W~~v~~~~~------~~~~~~~-~~-~~~~l~v~gg~-~~~i~v~d~~~~ 358 (387)
.+-..-...+. ...+..+ +. -+.++||.+.. ++.+.|+|..+.
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~ 170 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 170 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCC
Confidence 86443222221 1122222 23 34567877653 678999999865
No 292
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=81.67 E-value=31 Score=31.38 Aligned_cols=184 Identities=12% Similarity=0.062 Sum_probs=93.1
Q ss_pred cEEEeCCC--CceeeCCCCCCCceeeeEEee---CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCC---C
Q 044903 166 PLIFDPIC--RTWTFGPELVTPRRWCAAGYS---RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL---K 237 (387)
Q Consensus 166 ~~vydp~t--~~W~~l~~~~~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~---~ 237 (387)
+++++... .+|+.+.+........+.+.. .+.||+.+..+. .-..+...+-...+ |+.+... +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~-----~g~gl~~s~D~G~t----W~~~~~~~~~~ 103 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH-----LGPTVFRSDDGGGN----WTEATRPPAFN 103 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-------CCEEEEEESSTTSC----CEECSBCCCCC
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC-----CCccEEEeCCCCCC----ceECCccccCC
Confidence 56676654 689876321222222333333 467888764321 01134555555556 9988632 1
Q ss_pred CCcc-----cccceeEEEE-----CCEEEEEeeeCCeEEEEECCCCceeeccccc--cC--------------CCCCcEE
Q 044903 238 DGRF-----SREAIDAVGW-----KGKLCLVNVKGAEGAVYDVVANTWDDMREGM--VR--------------GWRGPVA 291 (387)
Q Consensus 238 ~~~~-----~~~~~~~v~~-----~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~--~~--------------~~~~~~~ 291 (387)
.... ......++.+ .+.+|+.+. ...++..+-...+|+.+.... +. ...-..+
T Consensus 104 ~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i 182 (394)
T 3b7f_A 104 KAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSI 182 (394)
T ss_dssp CCC----CCCCCEEEEEEECCTTSTTCEEEEEE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEE
T ss_pred CcccccccccccceeEEEeCCCCCCCEEEEEec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEE
Confidence 1100 0001222333 577887643 335677766677999875311 10 0011233
Q ss_pred EEe---CCeEEEEeCCCCeEEEEeCCCCceEEcccccc------c-----cCceeEEEeC---CeEEEEecCCceEEEEE
Q 044903 292 AMD---EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDL------L-----KGARHAAAGG---GRVCAVCENGGGIVVVD 354 (387)
Q Consensus 292 ~~~---~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~------~-----~~~~~~~~~~---~~l~v~gg~~~~i~v~d 354 (387)
++. .+.||+... .+.+++.+-..++|+.+..... . ...+.++... +.||+-. ...++..+
T Consensus 183 ~~d~~~~~~l~vg~~-~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~ 259 (394)
T 3b7f_A 183 LVDPRDPKHLYIGMS-SGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMD 259 (394)
T ss_dssp EECTTCTTCEEEEEE-TBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEE
T ss_pred EECCCCCCEEEEEEC-CCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeC
Confidence 333 356887643 4568888888899998853211 0 1123333332 5566643 34466665
Q ss_pred ecCCCCCceeEE
Q 044903 355 VKAAAAPTIFVV 366 (387)
Q Consensus 355 ~~~~~~~~~W~~ 366 (387)
... ..|+.
T Consensus 260 D~G----~tW~~ 267 (394)
T 3b7f_A 260 RRE----GVWKR 267 (394)
T ss_dssp TTT----TEEEC
T ss_pred CCC----CcceE
Confidence 543 48986
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=81.35 E-value=61 Score=34.59 Aligned_cols=137 Identities=10% Similarity=0.034 Sum_probs=79.4
Q ss_pred CCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEE
Q 044903 212 VAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVA 291 (387)
Q Consensus 212 ~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~ 291 (387)
....+.+|+....+ .+.+...+..-. ..+.+.++|+|.+ +.+..+.+||...++--......-.......+
T Consensus 862 ~~Gri~vf~v~~~k----L~lv~~~~v~g~---v~al~~~~g~Lla--~ig~~l~vy~l~~~~~L~~~~~~~~~i~~~~l 932 (1158)
T 3ei3_A 862 KQGRIVVFQYSDGK----LQTVAEKEVKGA---VYSMVEFNGKLLA--SINSTVRLYEWTTEKELRTECNHYNNIMALYL 932 (1158)
T ss_dssp CCEEEEEEEEETTE----EEEEEEEEESSC---EEEEEEETTEEEE--EETTEEEEEEECTTSCEEEEEEECCCSCEEEE
T ss_pred CceEEEEEEEECCE----EEEEEEEEcCCc---CEEEeeeCCEEEE--EcCCEEEEEECCCCceEEEEeeccccEEEEEE
Confidence 34578888877555 666553332111 1556678996543 45578999998766422211100000001133
Q ss_pred EEeCCeEEEEeCCCC-eEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEEEEecC
Q 044903 292 AMDEEVLYGIDENSC-TLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 292 ~~~~g~ly~~g~~~~-~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
...++.|++-+...+ .+..|+++.++-..+......+...++..+++.-++.+...++++++....
T Consensus 933 ~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 933 KTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred eccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 355777766654333 478899999988888866665555555555544455555667888886654
No 294
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=80.93 E-value=28 Score=30.46 Aligned_cols=168 Identities=10% Similarity=-0.033 Sum_probs=78.2
Q ss_pred CccEEEeCCCCceeeCCCCCCCceeeeEEee-CC-EEEEEecCCC------------------CCCCCCCceEEEEeCCC
Q 044903 164 TRPLIFDPICRTWTFGPELVTPRRWCAAGYS-RG-AVYVASGIGS------------------QFSSDVAKSVEKWDLMN 223 (387)
Q Consensus 164 ~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~-~~-~iyv~GG~~~------------------~~~~~~~~~v~vyd~~t 223 (387)
..++++|..+++.+.+...+. ....... ++ .|++...... .+.......+.++|..+
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred ceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 458899998887776654332 1112221 44 4544432100 00001135688899988
Q ss_pred CccccCe-EEcCCCCCCcccccceeEEEECCEEEEEeeeC---------CeEEEEECCCCceeeccccccCCCCCcEEEE
Q 044903 224 GEKNSRW-EKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---------AEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 224 ~~~~~~W-~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~---------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
++ . ..+.. + . . ......-+| +++.+... ..++.+| +++++.+... .. .....-
T Consensus 162 ~~----~~~~l~~-~-~-~---~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~-~~~~sp 224 (347)
T 2gop_A 162 EE----VIEEFEK-P-R-F---SSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---VS-FYAVDS 224 (347)
T ss_dssp TE----EEEEEEE-E-T-T---CEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---ES-EEEEEE
T ss_pred Ce----EEeeecC-C-C-c---ccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---cc-eeeECC
Confidence 87 6 54443 2 1 1 122222355 55444321 2566777 6666665432 11 112222
Q ss_pred eCCeEEEEeCC-------CCeEEEEeCCCCceEEccccccccCceeEEEeCCeEEEEecCCceEEE-EE
Q 044903 294 DEEVLYGIDEN-------SCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVV-VD 354 (387)
Q Consensus 294 ~~g~ly~~g~~-------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v-~d 354 (387)
.|..|++.+.. ...|++|| +.+++.+...........++..++ +++.+..+..+.+ ++
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~~~~~~l~~~ 290 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFEEGSVNLYIW 290 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEETTEEEEEEE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEecCCcEEEEEc
Confidence 33446655532 24699999 555665543211111111222255 7766554444444 44
No 295
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=79.68 E-value=5.2 Score=37.49 Aligned_cols=102 Identities=11% Similarity=0.011 Sum_probs=57.7
Q ss_pred CCEEEEEeeeC----CeEEEEECCCCcee-eccccccCCCCCcEEEE--eCCeEEEEeC---------CCCeEEEEeCCC
Q 044903 252 KGKLCLVNVKG----AEGAVYDVVANTWD-DMREGMVRGWRGPVAAM--DEEVLYGIDE---------NSCTLSKYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~~----~~i~~yD~~~~~W~-~~~~~~~~~~~~~~~~~--~~g~ly~~g~---------~~~~v~~yd~~~ 315 (387)
..++|+..... ..+.++|+.+.+=. +++. +.. +.+++ .+.++|+... .++.|.++|+.+
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v----G~~-Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG----GFL-PHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE----CSS-CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC----CCC-CceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 45678876543 57899998876432 2222 221 23332 2456888752 245799999998
Q ss_pred CceEEccccc---cc---cCcee-EEE-eCCeEEEEecC-CceEEEEEecCC
Q 044903 316 DDWKEVVKSD---LL---KGARH-AAA-GGGRVCAVCEN-GGGIVVVDVKAA 358 (387)
Q Consensus 316 ~~W~~v~~~~---~~---~~~~~-~~~-~~~~l~v~gg~-~~~i~v~d~~~~ 358 (387)
.+-..-...+ +. ...+. .+. -+.++||.... ++.+.|+|..+.
T Consensus 159 ~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~ 210 (426)
T 3c75_H 159 FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGK 210 (426)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTT
T ss_pred CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCC
Confidence 7543322221 11 11222 223 34567777543 578999999854
No 296
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=79.53 E-value=51 Score=32.64 Aligned_cols=180 Identities=14% Similarity=0.052 Sum_probs=90.7
Q ss_pred CCccEEEeCCCCcee--eCCCCC-CCceeeeEE-eeCCE-EEEEecCCCCCCCCCCceEEEEeCCC------C--ccccC
Q 044903 163 LTRPLIFDPICRTWT--FGPELV-TPRRWCAAG-YSRGA-VYVASGIGSQFSSDVAKSVEKWDLMN------G--EKNSR 229 (387)
Q Consensus 163 ~~~~~vydp~t~~W~--~l~~~~-~~r~~~~~~-~~~~~-iyv~GG~~~~~~~~~~~~v~vyd~~t------~--~~~~~ 229 (387)
...+++++..+.+-. .+-..+ .+....... .-+++ |++...... .....++++|..+ . .
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~~~~~l~~~d~~~~~~~~~~~~~---- 278 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC----DPVNRLWYCDLQQESNGITGILK---- 278 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS----SSCCEEEEEEGGGSSSSSCSSCC----
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC----CCccEEEEEECcccccccCCccc----
Confidence 345888898887643 221111 122112222 22444 444332221 1145788889876 4 4
Q ss_pred eEEcCCCCCCcccccceeEEEECCEEEEEeeeC---CeEEEEECCCC---ceeeccccccCCCCCcEEEEe-CCeEEEEe
Q 044903 230 WEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVAN---TWDDMREGMVRGWRGPVAAMD-EEVLYGID 302 (387)
Q Consensus 230 W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~---~~i~~yD~~~~---~W~~~~~~~~~~~~~~~~~~~-~g~ly~~g 302 (387)
+..+..-.... ......-++.||+.+..+ ..+..+|+.+. .|+.+-...... .-..++.. ++.+++..
T Consensus 279 ~~~l~~~~~~~----~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~lv~~~ 353 (710)
T 2xdw_A 279 WVKLIDNFEGE----YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKD-VLEWVACVRSNFLVLCY 353 (710)
T ss_dssp CEEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-EEEEEEEETTTEEEEEE
T ss_pred eEEeeCCCCcE----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCC-eEEEEEEEcCCEEEEEE
Confidence 77665322211 111223456788876543 57999998765 588764322111 11123344 67787776
Q ss_pred CCCC--eEEEEeCCCCc-eEEccccccccCceeEEEe--CC-eEEEEecC---CceEEEEEecCC
Q 044903 303 ENSC--TLSKYDEVMDD-WKEVVKSDLLKGARHAAAG--GG-RVCAVCEN---GGGIVVVDVKAA 358 (387)
Q Consensus 303 ~~~~--~v~~yd~~~~~-W~~v~~~~~~~~~~~~~~~--~~-~l~v~gg~---~~~i~v~d~~~~ 358 (387)
..++ .|+++|+.+.+ ...+.. + .+....+.. ++ .+++.... -..++.+|+.++
T Consensus 354 ~~~g~~~l~~~~~~~g~~~~~l~~-~--~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 415 (710)
T 2xdw_A 354 LHDVKNTLQLHDLATGALLKIFPL-E--VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKE 415 (710)
T ss_dssp EETTEEEEEEEETTTCCEEEEECC-C--SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSS
T ss_pred EECCEEEEEEEECCCCCEEEecCC-C--CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 5555 58889985543 344332 1 222222222 44 45444222 257899998754
No 297
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=79.19 E-value=30 Score=29.72 Aligned_cols=145 Identities=6% Similarity=0.022 Sum_probs=77.7
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++.+|++.... ..+..+|+.... ++.++--. . .+ ..++.+ +|.+++.......+.+|+...
T Consensus 38 ~~~L~aV~d~~--------~~I~~ld~~g~v----~~~i~l~g---~-~D-~EGIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 38 SNTLFSTINKP--------AAIVEMTTNGDL----IRTIPLDF---V-KD-LETIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp TTEEEEEEETT--------EEEEEEETTCCE----EEEEECSS---C-SS-EEEEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCEEEEEECCC--------CeEEEEeCCCCE----EEEEecCC---C-CC-hHHeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 57899876542 368889998665 77764211 1 12 233333 556556544446788887655
Q ss_pred Cc--eeecccccc----CCCCC-cEEEE--eCCeEEEEeCCCC-eEEEEeC--CCCceEEccc-----cccccCceeEEE
Q 044903 273 NT--WDDMREGMV----RGWRG-PVAAM--DEEVLYGIDENSC-TLSKYDE--VMDDWKEVVK-----SDLLKGARHAAA 335 (387)
Q Consensus 273 ~~--W~~~~~~~~----~~~~~-~~~~~--~~g~ly~~g~~~~-~v~~yd~--~~~~W~~v~~-----~~~~~~~~~~~~ 335 (387)
+. |..-...++ ....+ -.++. .+++||+...... .++.|+- .+..-+.+.. ........+++.
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~ 180 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEF 180 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEE
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEE
Confidence 43 521111111 11111 23343 3558999876544 6888872 2221222111 011222223332
Q ss_pred --eCCeEEEEecCCceEEEEEec
Q 044903 336 --GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 336 --~~~~l~v~gg~~~~i~v~d~~ 356 (387)
..|++||+...+..++++|.+
T Consensus 181 dp~tg~lliLS~~s~~L~~~d~~ 203 (255)
T 3qqz_A 181 NQQKNTLLVLSHESRALQEVTLV 203 (255)
T ss_dssp ETTTTEEEEEETTTTEEEEECTT
T ss_pred cCCCCeEEEEECCCCeEEEEcCC
Confidence 367899998888889999877
No 298
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=78.30 E-value=54 Score=32.23 Aligned_cols=101 Identities=13% Similarity=0.061 Sum_probs=46.8
Q ss_pred ceEEEEeCCCCccccCeEEcCCCCCCccccccee--EEEECCEEEEEeeeC----CeEEEEECCCCceeeccccccCCCC
Q 044903 214 KSVEKWDLMNGEKNSRWEKTGELKDGRFSREAID--AVGWKGKLCLVNVKG----AEGAVYDVVANTWDDMREGMVRGWR 287 (387)
Q Consensus 214 ~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~--~v~~~g~lyv~gg~~----~~i~~yD~~~~~W~~~~~~~~~~~~ 287 (387)
..+.++|..+.+. -..+.............. +..-||++.+..... ..+.++|+.+++...+-.....++.
T Consensus 228 ~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 304 (723)
T 1xfd_A 228 ISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWL 304 (723)
T ss_dssp EEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCC
T ss_pred eEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEE
Confidence 3788899887761 133332110000000111 222377765443221 5688889988776544211111221
Q ss_pred -----CcEEEEeCCeEEEE-eCCCC------eEEEEe-CCCCc
Q 044903 288 -----GPVAAMDEEVLYGI-DENSC------TLSKYD-EVMDD 317 (387)
Q Consensus 288 -----~~~~~~~~g~ly~~-g~~~~------~v~~yd-~~~~~ 317 (387)
.....-.|..|++. ...++ .|+.|| ..+..
T Consensus 305 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 305 HRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp CCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred eccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 12222223346665 43444 588888 44443
No 299
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=77.53 E-value=35 Score=35.72 Aligned_cols=98 Identities=15% Similarity=0.049 Sum_probs=52.8
Q ss_pred eEE-EEeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE
Q 044903 215 SVE-KWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM 293 (387)
Q Consensus 215 ~v~-vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~ 293 (387)
.++ +||..+.+ -..+.... .. ....+..-+|+..+++.....+.++|+++++-..+.... .+.-......
T Consensus 359 ~l~~~~d~~~~~----~~~l~~~~-~~---~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~S 429 (1045)
T 1k32_A 359 DFLGIYDYRTGK----AEKFEENL-GN---VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-EAMITDFTIS 429 (1045)
T ss_dssp EEEEEEETTTCC----EEECCCCC-CS---EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-SSCCCCEEEC
T ss_pred ceEEEEECCCCC----ceEecCCc-cc---eeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC-CCCccceEEC
Confidence 677 88988877 66554111 11 011122236766666555578999999888765553211 1111112223
Q ss_pred eCCeEEEEeCC----------CCeEEEEeCCCCceEEc
Q 044903 294 DEEVLYGIDEN----------SCTLSKYDEVMDDWKEV 321 (387)
Q Consensus 294 ~~g~ly~~g~~----------~~~v~~yd~~~~~W~~v 321 (387)
.+|+..++... .+.+++||.++.+...+
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 34553333322 13799999988764443
No 300
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=76.94 E-value=14 Score=35.57 Aligned_cols=101 Identities=3% Similarity=-0.116 Sum_probs=56.0
Q ss_pred EEEEEeeeCCeEEEEECCCCceee-ccccccCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce
Q 044903 254 KLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR 331 (387)
Q Consensus 254 ~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~ 331 (387)
.+.+.++.+..+.++|+.+.+-.. +....... .-.+++.. +++.++.++.++.|.+||..+..=.. .........
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~-~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~--~l~gH~~~V 400 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGS-NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVH--PLVSRETTI 400 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCC-SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCE--EEEECSSCE
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccC-cccceEeCCCcCeEEEeCCCCcEEEEECcccccce--eeecCCCce
Confidence 677777777889999986543211 11001100 01123333 36677777778889999987643111 111122221
Q ss_pred -e-EEEeCCeEEEEecCCceEEEEEecC
Q 044903 332 -H-AAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 332 -~-~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
+ ....+|+.++.|+.++.+.+||+..
T Consensus 401 ~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 401 TAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 1 2234677777777788888888653
No 301
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=76.54 E-value=29 Score=32.17 Aligned_cols=144 Identities=9% Similarity=-0.049 Sum_probs=69.4
Q ss_pred CEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCC
Q 044903 196 GAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 196 ~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
+.+++.|+.+. .+.+||..+.. -.... ... .....++.+ +|+..+.|+.+..+.+||+...
T Consensus 162 ~~~las~s~Dg--------~v~iwD~~~~~----~~~~~-~~~----~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~ 224 (434)
T 2oit_A 162 PSMVAVCLADG--------SIAVLQVTETV----KVCAT-LPS----TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQ 224 (434)
T ss_dssp TTEEEEEETTS--------CEEEEEESSSE----EEEEE-ECG----GGCEEEEEECTTSSCEEEEETTSCEEEECTTCC
T ss_pred CCEEEEEECCC--------eEEEEEcCCCc----ceeec-cCC----CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCc
Confidence 56677666543 67888887764 21100 000 011223333 5777777777788999998733
Q ss_pred ceeeccccccCCC----CCcEEEEeCCeEEEEeC--CC------CeEEEEeCCCC------ceEEccccc----cccCc-
Q 044903 274 TWDDMREGMVRGW----RGPVAAMDEEVLYGIDE--NS------CTLSKYDEVMD------DWKEVVKSD----LLKGA- 330 (387)
Q Consensus 274 ~W~~~~~~~~~~~----~~~~~~~~~g~ly~~g~--~~------~~v~~yd~~~~------~W~~v~~~~----~~~~~- 330 (387)
.-..+........ ...++...++..|++.. .+ ..+.+||..+. .|+....+. ..+..
T Consensus 225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 304 (434)
T 2oit_A 225 EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHH 304 (434)
T ss_dssp EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCC
T ss_pred ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcc
Confidence 2233321111000 11223333444555331 11 24888987543 566654331 11222
Q ss_pred eeEE-EeCCeE-EEEecCCceEEEEEec
Q 044903 331 RHAA-AGGGRV-CAVCENGGGIVVVDVK 356 (387)
Q Consensus 331 ~~~~-~~~~~l-~v~gg~~~~i~v~d~~ 356 (387)
+... ..+.++ ++.++.+..+-++...
T Consensus 305 ~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 305 YYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred eeeehhccCCEEEEecCCCCceeEEEec
Confidence 2222 223344 4444456777777755
No 302
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=75.86 E-value=57 Score=31.19 Aligned_cols=103 Identities=7% Similarity=-0.064 Sum_probs=55.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCc--EEE-E-e-CC-eEEEEeCCCCeEEEEeCCCCceEEccccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGP--VAA-M-D-EE-VLYGIDENSCTLSKYDEVMDDWKEVVKSD 325 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~--~~~-~-~-~g-~ly~~g~~~~~v~~yd~~~~~W~~v~~~~ 325 (387)
.+...+.|+.+..+.+||+.+.. .+.....+.... +++ . . ++ .+++.++.++.|.+||..+.+=..... .
T Consensus 276 ~~~~lasgs~DgtV~lWD~~~~~---~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~ 351 (524)
T 2j04_B 276 SPTTVVCGFKNGFVAEFDLTDPE---VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-S 351 (524)
T ss_dssp SSSEEEEEETTSEEEEEETTBCS---SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-E
T ss_pred CCCeEEEEeCCCEEEEEECCCCC---CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-c
Confidence 33445556666899999997642 010000111111 221 1 1 34 678888889999999986532111000 0
Q ss_pred ccc-C--ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 326 LLK-G--ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 326 ~~~-~--~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
... . ......-+++.++.++.+..+-++|+...
T Consensus 352 ~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~ 387 (524)
T 2j04_B 352 RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAA 387 (524)
T ss_dssp ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCT
T ss_pred ccccCcccceEeCCCcCeEEEeCCCCcEEEEECccc
Confidence 111 1 12223345777787777778888888753
No 303
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=75.68 E-value=65 Score=31.79 Aligned_cols=203 Identities=11% Similarity=0.091 Sum_probs=95.6
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEe-eCCEEEEEecCCCCC-----CCCCCceEEE
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGY-SRGAVYVASGIGSQF-----SSDVAKSVEK 218 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~-~~~~iyv~GG~~~~~-----~~~~~~~v~v 218 (387)
-+|+.+++..... ......++++|..+++......++.... ...+- -+++.++.+...... .......+..
T Consensus 130 PDG~~la~~~~~~--G~~~~~i~v~dl~tg~~~~~~~~~~~~~-~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~ 206 (695)
T 2bkl_A 130 WDGKKVAFAQKPN--AADEAVLHVIDVDSGEWSKVDVIEGGKY-ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRY 206 (695)
T ss_dssp TTSSEEEEEEEET--TCSCCEEEEEETTTCCBCSSCCBSCCTT-CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEE
T ss_pred CCCCEEEEEECCC--CCceEEEEEEECCCCCCcCCcccCcccc-cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEE
Confidence 4666555543211 1123578999999988751111221111 11222 245544444432210 0022446888
Q ss_pred EeCCCCccccCeEEcCCCCCCcccccceeEEEECCEEEEEee-eC---CeEEEEECCCCceeeccccccCCCCCcEEEEe
Q 044903 219 WDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNV-KG---AEGAVYDVVANTWDDMREGMVRGWRGPVAAMD 294 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg-~~---~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~ 294 (387)
++..+++.. =..+...+..... .......-+|+..++.. .. ..++.+|..+..|+.+..... . ....+..
T Consensus 207 ~~l~t~~~~--~~lv~~~~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~--~~~~~~~ 280 (695)
T 2bkl_A 207 HTLGTEPSK--DTVVHERTGDPTT-FLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVG-A--KYEVHAW 280 (695)
T ss_dssp EETTSCGGG--CEEEECCCCCTTC-EEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSS-C--CEEEEEE
T ss_pred EECCCCchh--ceEEEecCCCCEE-EEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCC-c--eEEEEec
Confidence 888876510 1122111111000 00112223565433332 22 366667776677877754221 1 1122224
Q ss_pred CCeEEEEeC---CCCeEEEEeCCCCc---eEEccccccccCceeEEEeCCeEEEEecCC--ceEEEEEec
Q 044903 295 EEVLYGIDE---NSCTLSKYDEVMDD---WKEVVKSDLLKGARHAAAGGGRVCAVCENG--GGIVVVDVK 356 (387)
Q Consensus 295 ~g~ly~~g~---~~~~v~~yd~~~~~---W~~v~~~~~~~~~~~~~~~~~~l~v~gg~~--~~i~v~d~~ 356 (387)
+|.+|+... ..+.|+++|.++.. |+.+...........+...++++++....+ ..++++|..
T Consensus 281 ~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 281 KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 555766654 24679999987654 887654221111112333478888775543 456777754
No 304
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=74.48 E-value=50 Score=29.90 Aligned_cols=192 Identities=12% Similarity=0.080 Sum_probs=96.1
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCC---CC--------------CceeeeEEee---CCEEEEEecCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPEL---VT--------------PRRWCAAGYS---RGAVYVASGIG 205 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~---~~--------------~r~~~~~~~~---~~~iyv~GG~~ 205 (387)
.+.+|+.+. ...+++.+-...+|+.+... |. ....++.... .+.||+....+
T Consensus 128 ~~~l~~g~~--------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~g 199 (394)
T 3b7f_A 128 PGTWYAGTS--------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSG 199 (394)
T ss_dssp TTCEEEEEE--------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETB
T ss_pred CCEEEEEec--------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCC
Confidence 456766542 13467777788899987532 11 1112223322 35688764321
Q ss_pred CCCCCCCCceEEEEeCCCCccccCeEEcCCC------CCCc--ccccceeEEEEC----CEEEEEeeeCCeEEEEECCCC
Q 044903 206 SQFSSDVAKSVEKWDLMNGEKNSRWEKTGEL------KDGR--FSREAIDAVGWK----GKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 206 ~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~------~~~~--~~~~~~~~v~~~----g~lyv~gg~~~~i~~yD~~~~ 273 (387)
.+...+-...+ |+.+..- |.+. .... ...+.++ +.||+.. ...++.++-...
T Consensus 200 ---------gl~~s~DgG~t----W~~~~~~~~~~~~p~~~~~~g~~-~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~ 263 (394)
T 3b7f_A 200 ---------GVFESTDAGTD----WKPLNRGCAANFLPDPNVEFGHD-PHCVVQHPAAPDILYQQN--HCGIYRMDRREG 263 (394)
T ss_dssp ---------EEEEESSTTSS----CEECCTTCCCTTSSSSSSSSCBC-EEEEEECSSSTTEEEEEE--TTEEEEEETTTT
T ss_pred ---------CEEEECCCCCC----ceECCCCccccccCCCccccCcc-eeEEEECCCCCCEEEEEc--CCeEEEeCCCCC
Confidence 24445445556 9987531 1110 0111 2223332 6777743 235777777788
Q ss_pred ceeeccccccCC--CCCcEEEE---eCCeEEEEeCC----------C--CeEEEEeCCCCceEEccc-ccccc-----Cc
Q 044903 274 TWDDMREGMVRG--WRGPVAAM---DEEVLYGIDEN----------S--CTLSKYDEVMDDWKEVVK-SDLLK-----GA 330 (387)
Q Consensus 274 ~W~~~~~~~~~~--~~~~~~~~---~~g~ly~~g~~----------~--~~v~~yd~~~~~W~~v~~-~~~~~-----~~ 330 (387)
+|+.+...++.. .....+++ ..+.||+.... . ..+++-.-...+|+.+.. +|... ..
T Consensus 264 tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~ 343 (394)
T 3b7f_A 264 VWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKR 343 (394)
T ss_dssp EEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCT
T ss_pred cceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEE
Confidence 999886534331 11223444 34678887421 1 234443334578999863 23211 11
Q ss_pred eeEEE--eC-CeEEEEecCCceEEEEEecCCCCCceeEE
Q 044903 331 RHAAA--GG-GRVCAVCENGGGIVVVDVKAAAAPTIFVV 366 (387)
Q Consensus 331 ~~~~~--~~-~~l~v~gg~~~~i~v~d~~~~~~~~~W~~ 366 (387)
.+++. .+ +.||+. +....++.-+.. |..|+.
T Consensus 344 ~~~~~~p~~~~~l~~g-~~~g~l~~S~D~----G~tW~~ 377 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFG-TTGGEIWASADE----GEHWQC 377 (394)
T ss_dssp BSEEECCSSSCCEEEE-CTTSCEEEESST----TSBCEE
T ss_pred EEEEECCCCCCEEEEE-eCCCeEEEECCC----CCCceE
Confidence 22333 23 346653 445556655444 357996
No 305
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=74.37 E-value=59 Score=30.64 Aligned_cols=136 Identities=13% Similarity=0.175 Sum_probs=75.0
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcC--CCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCC
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVA 272 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~ 272 (387)
++++|++-|. ..+.||..+++ ..... .+|. .-++...+|++|++-| ..-+.||..+
T Consensus 158 ~~~~yfFkG~----------~yw~yd~~~~~----~~~~~w~gi~~------iDAA~~~~g~~YfFkG--~~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQGN----------RKWFWDLTTGT----KKERSWPAVGN------CTSALRWLGRYYCFQG--NQFLRFNPVS 215 (460)
T ss_dssp SSEEEEEETT----------EEEEEETTTTE----EEEECCTTSCC------CSEEEEETTEEEEEET--TEEEEECTTT
T ss_pred CCeEEEEecc----------cEEEEecccce----eecccCCCCCc------cchheeeCCceEEEEC--CEEEEEcCcc
Confidence 6778877653 45888887765 44211 1221 1334556899999866 4678888754
Q ss_pred Cc------------eeeccc-c-----------------ccCCCCCcEEEE-eCCeEEEEeCCCCeEEEEeCCCCceEE-
Q 044903 273 NT------------WDDMRE-G-----------------MVRGWRGPVAAM-DEEVLYGIDENSCTLSKYDEVMDDWKE- 320 (387)
Q Consensus 273 ~~------------W~~~~~-~-----------------~~~~~~~~~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W~~- 320 (387)
.+ |..++. + ......-.++.. .+|++|++- +...+++|..++.+..
T Consensus 216 ~~v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFK--g~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 216 GEVPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFS--GSHYWRLDTNRDGWHSW 293 (460)
T ss_dssp CCCCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEE--TTEEEECTTGGGCCCCE
T ss_pred CcccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEe--CCEEEEEecCCCCcCcc
Confidence 32 222111 0 000011223333 468999995 4578888876543321
Q ss_pred -cccc-cc-ccCceeEEEeCCeEEEEecCCceEEEEEec
Q 044903 321 -VVKS-DL-LKGARHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 321 -v~~~-~~-~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
|... +. +..--++...++++|+| .|..+++|+..
T Consensus 294 ~Is~~WpglP~~IDAAf~~~~~~yfF--kG~~yw~f~~~ 330 (460)
T 1qhu_A 294 PIAHQWPQGPSTVDAAFSWEDKLYLI--QDTKVYVFLTK 330 (460)
T ss_dssp EGGGTCTTSCSSCSEEEEETTEEEEE--ETTEEEEEECS
T ss_pred chhhhccCCCCCCcEEEEECCeEEEE--eCCEEEEEeCC
Confidence 1110 11 11223455668999999 46778888865
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=74.03 E-value=51 Score=29.82 Aligned_cols=134 Identities=13% Similarity=0.115 Sum_probs=70.8
Q ss_pred ceEEEE--eCCCCccccCeEEcCCC--C--CCcccccceeEEEE----CCEEEEEeee-CCeEEEEECC---CCcee--e
Q 044903 214 KSVEKW--DLMNGEKNSRWEKTGEL--K--DGRFSREAIDAVGW----KGKLCLVNVK-GAEGAVYDVV---ANTWD--D 277 (387)
Q Consensus 214 ~~v~vy--d~~t~~~~~~W~~~~~~--~--~~~~~~~~~~~v~~----~g~lyv~gg~-~~~i~~yD~~---~~~W~--~ 277 (387)
+.+.+| |+.+++ +..+... | .... .....|.+ .+++|++-.. ...++.|++. ..+.. .
T Consensus 99 n~l~vf~iDp~~~~----l~~i~~~~~pv~t~~~--~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~l 172 (355)
T 3amr_A 99 NTIEIYAIDGKNGT----LQSMTDPDHPIATAIN--EVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKK 172 (355)
T ss_dssp CEEEEEEECTTTCC----EEECSCTTSCEECCCS--SCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEE
T ss_pred CeEEEEEECCCCCc----eeeccccccCcCCCCC--CeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceE
Confidence 467777 778888 9999654 3 2211 11333442 3666655222 2466776663 33232 1
Q ss_pred ccccccCCCCCcEEEEe---CCeEEEEeCCCCeEEEEeCC--CC-ceEEcccc--cccc-CceeEEEe-C----CeEEEE
Q 044903 278 MREGMVRGWRGPVAAMD---EEVLYGIDENSCTLSKYDEV--MD-DWKEVVKS--DLLK-GARHAAAG-G----GRVCAV 343 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~~---~g~ly~~g~~~~~v~~yd~~--~~-~W~~v~~~--~~~~-~~~~~~~~-~----~~l~v~ 343 (387)
+.. +..+. .+..++. .++||+-... ..||+||.+ +. +-+.+... +... ...+++.+ + +.|++.
T Consensus 173 VR~-f~lgs-q~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivS 249 (355)
T 3amr_A 173 VRA-FKMNS-QTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMAS 249 (355)
T ss_dssp EEE-EECSS-CEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEE
T ss_pred EEE-ecCCC-CcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEE
Confidence 221 22221 2333433 3689988765 459999954 31 23444322 2222 33445543 2 356666
Q ss_pred ecCCceEEEEEec
Q 044903 344 CENGGGIVVVDVK 356 (387)
Q Consensus 344 gg~~~~i~v~d~~ 356 (387)
..+++...|||..
T Consensus 250 sQG~~s~~Vydr~ 262 (355)
T 3amr_A 250 SQGNSSYAIYDRQ 262 (355)
T ss_dssp EGGGTEEEEEESS
T ss_pred cCCCCEEEEEECC
Confidence 5566788999986
No 307
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=73.45 E-value=75 Score=31.44 Aligned_cols=144 Identities=13% Similarity=0.065 Sum_probs=79.2
Q ss_pred CccEEEeCCCC--ceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 164 TRPLIFDPICR--TWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 164 ~~~~vydp~t~--~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
++++++|..+. .|+.+..-..... ......++++|+....+. ....+.++|..+.... .|+.+.+-...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~-----~~~~l~~~d~~~~~~~-~~~~l~~~~~~-- 329 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA-----PNRRLVTVDAANPGPA-HWRDLIPERQQ-- 329 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC-----TTCEEEEEETTSCCGG-GCEEEECCCSS--
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC-----CCCEEEEEeCCCCCcc-ccEEEecCCCC--
Confidence 57888888765 6777643222221 223455788888765432 1246788888764310 18776432221
Q ss_pred cccceeEEEECCEEEEEeeeC--CeEEEEECCCCceeeccccccCCCCCcEEEE----eCCeEEEEeC---CCCeEEEEe
Q 044903 242 SREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMREGMVRGWRGPVAAM----DEEVLYGIDE---NSCTLSKYD 312 (387)
Q Consensus 242 ~~~~~~~v~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~----~~g~ly~~g~---~~~~v~~yd 312 (387)
. ......++.|++....+ ..+.++|+..+..+.+.- +.. +....+ .++.+++... ..+.++.||
T Consensus 330 ~---~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~--p~~--~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 330 V---LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL--PGL--GSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp C---EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC--SSS--SEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred E---EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec--CCC--ceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 1 22334456665554333 478899988665555432 111 111111 2345555432 236899999
Q ss_pred CCCCceEEccc
Q 044903 313 EVMDDWKEVVK 323 (387)
Q Consensus 313 ~~~~~W~~v~~ 323 (387)
.++.+.+.+..
T Consensus 403 ~~~g~~~~l~~ 413 (693)
T 3iuj_A 403 PKSGAISLYRA 413 (693)
T ss_dssp TTTCCEEEEEC
T ss_pred CCCCeEEEEEe
Confidence 98888877654
No 308
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=72.88 E-value=37 Score=27.72 Aligned_cols=139 Identities=13% Similarity=0.015 Sum_probs=73.6
Q ss_pred EEeCCEEEEEcCccCCCCCCCCccEEEeCCCC-----------ceeeCCCCCCCceeeeEEe--eCCEEEEEecCCCCCC
Q 044903 143 VSLSGKLILLAATTHNFNPALTRPLIFDPICR-----------TWTFGPELVTPRRWCAAGY--SRGAVYVASGIGSQFS 209 (387)
Q Consensus 143 ~~~~~~l~v~GG~~~~~~~~~~~~~vydp~t~-----------~W~~l~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~ 209 (387)
+..+|++|++-| +.+|.++.... .|..| |.... ++.. .++++|++-|.
T Consensus 13 ~~~~g~~yfFkg---------~~~Wr~~~~~~~~~~~p~~Is~~w~gl---P~~ID--Aa~~~~~~~~~yfFkG~----- 73 (195)
T 1itv_A 13 AEIGNQLYLFKD---------GKYWRFSEGRGSRPQGPFLIADKWPAL---PRKLD--SVFEEPLSKKLFFFSGR----- 73 (195)
T ss_dssp EEETTEEEEEET---------TEEEEECCSSSCCCEEEEEHHHHCTTS---CSSCS--EEEECTTTCCEEEEETT-----
T ss_pred EEeCCEEEEEEC---------CEEEEEECCccccCCCcEEhhhccCCC---CCCcc--EEEEECCCCeEEEEeCC-----
Confidence 337999999987 35677766442 23333 32221 1222 26789988763
Q ss_pred CCCCceEEEEeCCCCccccCeEEcC--CCCCCcccccceeEEEE--CCEEEEEeeeCCeEEEEECCCCceee-----cc-
Q 044903 210 SDVAKSVEKWDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGW--KGKLCLVNVKGAEGAVYDVVANTWDD-----MR- 279 (387)
Q Consensus 210 ~~~~~~v~vyd~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~--~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~- 279 (387)
..++|+..+-. .=+.+. .+|... ....+|.. +|++|++-| ...+.||..+++=.. +.
T Consensus 74 -----~yw~~~~~~~~---~Pk~i~~~G~p~~~---~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~~ 140 (195)
T 1itv_A 74 -----QVWVYTGASVL---GPRRLDKLGLGADV---AQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVDR 140 (195)
T ss_dssp -----EEEEEETTEEE---EEEEGGGGTCCTTC---CCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEHHH
T ss_pred -----EEEEEcCCccC---CCEEeeecccCCCc---cceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccChhh
Confidence 34555532111 001111 122211 12334443 689999855 467899987653211 10
Q ss_pred --ccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc
Q 044903 280 --EGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 280 --~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~ 317 (387)
.+++. .-.++...+|.+|++.+ ...+.||..+.+
T Consensus 141 ~w~Gvp~--~idaa~~~~g~~Yffkg--~~y~~~~~~~~~ 176 (195)
T 1itv_A 141 MFPGVPL--DTHDVFQFREKAYFCQD--RFYWRVSSRSEL 176 (195)
T ss_dssp HSTTSCS--SCSEEEEETTEEEEEET--TEEEEEECCTTC
T ss_pred cCCCCCC--CCCEEEEeCCeEEEEeC--CEEEEEECCccE
Confidence 01111 12345556789999953 578999987764
No 309
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=72.36 E-value=65 Score=30.29 Aligned_cols=50 Identities=10% Similarity=-0.150 Sum_probs=26.8
Q ss_pred CCeEEEEeCCCCceEEccccccc---cCceeE-E--E-eCCeEEEEec-----CCceEEEEEec
Q 044903 305 SCTLSKYDEVMDDWKEVVKSDLL---KGARHA-A--A-GGGRVCAVCE-----NGGGIVVVDVK 356 (387)
Q Consensus 305 ~~~v~~yd~~~~~W~~v~~~~~~---~~~~~~-~--~-~~~~l~v~gg-----~~~~i~v~d~~ 356 (387)
...|.+||.++. +.+...+.. .....+ . . -+..+||.+. -++.++++...
T Consensus 227 ~d~V~v~D~~~~--k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d 288 (462)
T 2ece_A 227 GNRIHFWDLRKR--KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYE 288 (462)
T ss_dssp CCEEEEEETTTT--EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEE
T ss_pred CCEEEEEECCCC--cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEec
Confidence 467999999875 333332221 111111 1 1 1345777766 56677776665
No 310
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=72.24 E-value=5.6 Score=37.23 Aligned_cols=59 Identities=12% Similarity=0.023 Sum_probs=39.0
Q ss_pred CeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEE--EeCCeEEEEecCCceEEEEEec
Q 044903 296 EVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAA--AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~--~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.+++.++.++.|.+||..+.. .+...........++ ..+|+.++.|+.++.+.+||+.
T Consensus 162 ~~~las~s~Dg~v~iwD~~~~~--~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 162 PSMVAVCLADGSIAVLQVTETV--KVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp TTEEEEEETTSCEEEEEESSSE--EEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCEEEEEECCCeEEEEEcCCCc--ceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 5677777788999999998762 222111122222222 3367888888888889999987
No 311
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=71.96 E-value=22 Score=35.82 Aligned_cols=99 Identities=17% Similarity=0.196 Sum_probs=53.1
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEE----eC---CeEEEEeCCC--CeEEEEeCCCCceEEcc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAM----DE---EVLYGIDENS--CTLSKYDEVMDDWKEVV 322 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~----~~---g~ly~~g~~~--~~v~~yd~~~~~W~~v~ 322 (387)
++.+|+.+..+ .++.-+=.-.+|+.+.. +..+ ....+ .+ +.||+++... ..|++-+-...+|+.+.
T Consensus 620 ~g~l~~~~~~g-~l~~S~D~G~tW~~~~~-~~~~---~~~~~~~~~~~~~~~~l~~~g~~g~~~gl~~S~D~G~tW~~~~ 694 (737)
T 2cn3_A 620 EGHVWLAAREG-GLWRSTDGGYTFEKLSN-VDTA---HVVGFGKAAPGQDYMAIYITGKIDNVLGFFRSDDAGKTWVRIN 694 (737)
T ss_dssp EEEEEEECBTT-CEEEESSTTSSCEECTT-CSEE---EEEEEECCCTTCSSCEEEEEEEETTEEEEEEESSTTSSCEECS
T ss_pred CCEEEEEeCCC-cEEEEeCCCcccEECcC-CCcc---ceEEEeecCCCCCCcEEEEEEecCCcceEEEeCCCCCCCEecc
Confidence 56788876532 34443323469999863 2221 11212 12 2688886321 22655555678999997
Q ss_pred ccccccC--ceeEE---EeCCeEEEEecCCceEEEEEec
Q 044903 323 KSDLLKG--ARHAA---AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 323 ~~~~~~~--~~~~~---~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
....... ...+. ...++||+. ..+..++..++.
T Consensus 695 ~~~~~~~~~~~~i~~d~~~~g~v~~~-t~g~g~~~~~~~ 732 (737)
T 2cn3_A 695 DDEHGYGAVDTAITGDPRVYGRVYIA-TNGRGIVYGEPA 732 (737)
T ss_dssp BTTBCCSCCCSCEEEETTEEEEEEEE-CBSSCEEEEEEC
T ss_pred CCccccCcccceecCCCCcCceEEEE-eCCCceEEEecC
Confidence 4322111 11111 124778775 566778888877
No 312
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.28 E-value=22 Score=33.96 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=63.7
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcE-EEE---------eCCeEEEEeCCCC------eEEEEeCCC
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPV-AAM---------DEEVLYGIDENSC------TLSKYDEVM 315 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~-~~~---------~~g~ly~~g~~~~------~v~~yd~~~ 315 (387)
++.||+.......+...|++++.-..+......+...+. +++ .++.||+.....+ .++.++.+.
T Consensus 151 ~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~ 230 (496)
T 3kya_A 151 KDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA 230 (496)
T ss_dssp EEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT
T ss_pred CCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC
Confidence 467998865446789999999888776532111222233 333 2345998875431 377787554
Q ss_pred -CceEE-c--cccccccCceeEEEe--CCeEEEEecCCceEEEEEec
Q 044903 316 -DDWKE-V--VKSDLLKGARHAAAG--GGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 316 -~~W~~-v--~~~~~~~~~~~~~~~--~~~l~v~gg~~~~i~v~d~~ 356 (387)
..|.. . ...+.....+.++.. ++.||+.-...+.++.+|+.
T Consensus 231 ~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 231 DGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 35531 0 111223344445544 57899987777889999997
No 313
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=71.16 E-value=35 Score=33.26 Aligned_cols=105 Identities=8% Similarity=-0.104 Sum_probs=60.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecccccc-CCCCCcEEE-EeCCeEEEEeCCCCeEEEEeCCCCce-----EEcccc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMV-RGWRGPVAA-MDEEVLYGIDENSCTLSKYDEVMDDW-----KEVVKS 324 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~-~~~~~~~~~-~~~g~ly~~g~~~~~v~~yd~~~~~W-----~~v~~~ 324 (387)
+|+..+.++....+.++|.+. .+..+....+ ......+++ ..+|++.+.++.+|.|.+||..++.- ..+...
T Consensus 96 dG~~LAs~s~dg~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 96 IDDWMAVLSNNGNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp SSSCEEEEETTSCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 666666666666778888544 4444331111 111122333 34677777888899999999988642 122221
Q ss_pred ----ccccCc-eeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 325 ----DLLKGA-RHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 325 ----~~~~~~-~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
..+... ..++...+. ++.++.+..+.+||+..+
T Consensus 175 ~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~ 212 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSAS 212 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSS
T ss_pred ecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCC
Confidence 111222 334444444 667778899999999855
No 314
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=71.11 E-value=41 Score=27.48 Aligned_cols=60 Identities=13% Similarity=0.130 Sum_probs=35.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceee-----ccc--cccCCCCCcEEEEe-CC-eEEEEeCCCCeEEEEeCCCCc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDD-----MRE--GMVRGWRGPVAAMD-EE-VLYGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~~--~~~~~~~~~~~~~~-~g-~ly~~g~~~~~v~~yd~~~~~ 317 (387)
+|++|++-| ...+.||..+++-.. +.. +++.. -.++... ++ ++|++- ....++||..+.+
T Consensus 109 ~g~~yfFkG--~~yw~yd~~~~~v~~gyPk~i~~~~gip~~--idaAf~~~~~~~~YfFk--g~~y~r~d~~~~~ 177 (196)
T 3c7x_A 109 NGKTYFFRG--NKYYRFNEELRAVDSEYPKNIKVWEGIPES--PRGSFMGSDEVFTYFYK--GNKYWKFNNQKLK 177 (196)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECTTCSEEGGGSBTCCSS--CSEEEECTTSSEEEEEE--TTEEEEEETTTTE
T ss_pred CCEEEEEEC--CEEEEEeCCcccccCCCCccHHHCCCcCCC--cceeEEecCCCEEEEEE--CCEEEEEECCcce
Confidence 589999855 467899987653221 110 11111 1233333 34 899995 4578999987763
No 315
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=70.94 E-value=24 Score=32.04 Aligned_cols=103 Identities=13% Similarity=0.040 Sum_probs=56.1
Q ss_pred EEEEEeeeCCeEEEEECCCCceeeccc-cccCCCCCc--EEEE---------eCCeEEEEeCCCCeEEEEeCCCCceEEc
Q 044903 254 KLCLVNVKGAEGAVYDVVANTWDDMRE-GMVRGWRGP--VAAM---------DEEVLYGIDENSCTLSKYDEVMDDWKEV 321 (387)
Q Consensus 254 ~lyv~gg~~~~i~~yD~~~~~W~~~~~-~~~~~~~~~--~~~~---------~~g~ly~~g~~~~~v~~yd~~~~~W~~v 321 (387)
.+.+.++.+..+.++|..+..=..... ....+.... +++. .++++.+-++.++.+.+||..+.. .+
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--~~ 179 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--PI 179 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--EE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--ee
Confidence 344445555677788776654322111 011121111 2222 156788888889999999987653 11
Q ss_pred cccccccCc-eeEEEe-CC-eEEEEecCCceEEEEEecCC
Q 044903 322 VKSDLLKGA-RHAAAG-GG-RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 322 ~~~~~~~~~-~~~~~~-~~-~l~v~gg~~~~i~v~d~~~~ 358 (387)
......... .+++.. ++ .+++.|+.++.+.+||....
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 111122222 223322 44 57777778899999998754
No 316
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=70.91 E-value=29 Score=29.23 Aligned_cols=61 Identities=11% Similarity=0.005 Sum_probs=36.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceee-----ccccccCC------CCCcEEEE--eCCeEEEEeCCCCeEEEEeCCCC
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDD-----MREGMVRG------WRGPVAAM--DEEVLYGIDENSCTLSKYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~~~~~~~------~~~~~~~~--~~g~ly~~g~~~~~v~~yd~~~~ 316 (387)
++++|++-| ...++||..+++=.. +..+++.. ..-.++.. .++++|++- ....++||..+.
T Consensus 129 ~~k~yfFkG--~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFk--g~~Ywr~d~~~~ 202 (227)
T 3lp9_A 129 GKEVYLFKG--DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFK--DDHYARVKVTPX 202 (227)
T ss_dssp TTEEEEEET--TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEE--TTEEEEEECCSS
T ss_pred CCEEEEEEC--CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEE--CCEEEEEECCcc
Confidence 589999965 478899987553211 11112210 11223333 358999995 357899998776
No 317
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=70.84 E-value=81 Score=30.72 Aligned_cols=102 Identities=10% Similarity=0.027 Sum_probs=58.8
Q ss_pred ECCEEEEEeeeCCeEEEEECCCCc--------eeeccccc--cCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCc---
Q 044903 251 WKGKLCLVNVKGAEGAVYDVVANT--------WDDMREGM--VRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDD--- 317 (387)
Q Consensus 251 ~~g~lyv~gg~~~~i~~yD~~~~~--------W~~~~~~~--~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~--- 317 (387)
-+|++.+.|+.+..+.+||..++. -..+.... ...+ -.+++...+. ++.++.++.++.||..++.
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~-V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~ 216 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDW-VTHIVWYEDV-LVAALSNNSVFSMTVSASSHQP 216 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCC-EEEEEEETTE-EEEEETTCCEEEECCCSSSSCC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccccccccc-EEEEEEcCCc-EEEEeCCCeEEEEECCCCcccc
Confidence 478888888888899999998763 22222111 1111 2233444444 6666678899999998765
Q ss_pred -eEEccccccccC-ceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 318 -WKEVVKSDLLKG-ARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 318 -W~~v~~~~~~~~-~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
|..+.. ..+. -..++-.+ ..++.++ ++.|.+||..+.
T Consensus 217 ~~~tL~~--~h~~~V~svaFsg-~~LASa~-~~tIkLWd~~~~ 255 (588)
T 2j04_A 217 VSRMIQN--ASRRKITDLKIVD-YKVVLTC-PGYVHKIDLKNY 255 (588)
T ss_dssp CEEEEEC--CCSSCCCCEEEET-TEEEEEC-SSEEEEEETTTT
T ss_pred ceeeecc--cccCcEEEEEEEC-CEEEEEe-CCeEEEEECCCC
Confidence 223321 1221 12223234 5555544 478899998854
No 318
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=70.83 E-value=68 Score=29.83 Aligned_cols=63 Identities=10% Similarity=0.124 Sum_probs=39.5
Q ss_pred eCCeEEEEeCC---------CCeEEEEeCCCCceEEccccccccCceeE-EEeCC--eEEEEecCCceEEEEEecCC
Q 044903 294 DEEVLYGIDEN---------SCTLSKYDEVMDDWKEVVKSDLLKGARHA-AAGGG--RVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 294 ~~g~ly~~g~~---------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~-~~~~~--~l~v~gg~~~~i~v~d~~~~ 358 (387)
.++++|+...+ ++.|.++|.++.+ .+...+.......+ +.-+| .+|+....++.+.|||..+.
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--RINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--EEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTC
T ss_pred CCCEEEEEecccccccccCCCCEEEEEECCCCe--EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCC
Confidence 45789997521 3469999997764 33333333333333 33445 47777667899999999843
No 319
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=66.34 E-value=2.8 Score=25.23 Aligned_cols=20 Identities=30% Similarity=0.333 Sum_probs=15.5
Q ss_pred CCCCCCCChHHHHHHHhhhc
Q 044903 39 HQPLLPGLPDHIAHLCLSHV 58 (387)
Q Consensus 39 ~~~~~~~LP~dl~~~iL~rL 58 (387)
++..+..||.||.+|+|+--
T Consensus 17 D~eVF~~LP~dIQ~Ells~~ 36 (48)
T 2kwv_A 17 DQEVFKQLPADIQEEILSGK 36 (48)
T ss_dssp CGGGTTTSCHHHHHHHTTCC
T ss_pred CHHHHHHCcHHHHHHHHhcc
Confidence 45577889999999998743
No 320
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=64.77 E-value=62 Score=28.92 Aligned_cols=59 Identities=12% Similarity=0.082 Sum_probs=36.3
Q ss_pred eCCeEEEEeC----------CCCeEEEEeCCCCceEEccccccccCceeEEE-eCC-eEEEEecCCceEEEEEecC
Q 044903 294 DEEVLYGIDE----------NSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA-GGG-RVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 294 ~~g~ly~~g~----------~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~-~~~-~l~v~gg~~~~i~v~d~~~ 357 (387)
.++++|+... ..+.|++||.++.+ .+...+... ...++. -+| .||+.+ . +.+.+||..+
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n-~-~~v~v~D~~t 334 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLD-G-GNVNVYDISQ 334 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEEC-S-SCEEEEECSS
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeC-C-CeEEEEECCC
Confidence 3578998753 13479999998874 444433333 443433 344 555553 3 8899999884
No 321
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=63.23 E-value=1.1e+02 Score=29.98 Aligned_cols=67 Identities=9% Similarity=-0.162 Sum_probs=33.4
Q ss_pred ccEEEeCCCCceeeCCCCCCC---ceeeeEEeeCCEEEEEecCCC-CCCCCCCceEEEEeCCCCccccCeEEcCC
Q 044903 165 RPLIFDPICRTWTFGPELVTP---RRWCAAGYSRGAVYVASGIGS-QFSSDVAKSVEKWDLMNGEKNSRWEKTGE 235 (387)
Q Consensus 165 ~~~vydp~t~~W~~l~~~~~~---r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~v~vyd~~t~~~~~~W~~~~~ 235 (387)
.++++|+.+++-..+-..... .....+..-+++..+++.... .........+.++|..+++ -..+..
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~----~~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGD----PQSLDP 108 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCC----CEECCC
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCc----eEeccC
Confidence 577888877765543222111 111112222455444443321 1111234688999999887 555543
No 322
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=62.88 E-value=89 Score=28.26 Aligned_cols=153 Identities=7% Similarity=-0.083 Sum_probs=73.6
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceee-CCC--CCCCceeeeEEeeCCEEEEEecCCCC----CCCCCCceEEE
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTF-GPE--LVTPRRWCAAGYSRGAVYVASGIGSQ----FSSDVAKSVEK 218 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~-l~~--~~~~r~~~~~~~~~~~iyv~GG~~~~----~~~~~~~~v~v 218 (387)
++.+++-|+.+ ..+.++|+.|++-.+ +.. .......+.+..-++++.+.+..... ..+.....+..
T Consensus 192 ~~~~LaSgS~D-------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIkl 264 (356)
T 2w18_A 192 MQEALLGTTIM-------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIV 264 (356)
T ss_dssp STTEEEEEETT-------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEE
T ss_pred CCceEEEecCC-------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEE
Confidence 34555555532 467889999987533 321 11111111122236677666543210 11233457788
Q ss_pred EeCCCCccccCeEEcC--CCCCCcccccceeEEEECCEEEEEeeeCCeEEEEECCCCceee-ccccccCCCCCcEEE-Ee
Q 044903 219 WDLMNGEKNSRWEKTG--ELKDGRFSREAIDAVGWKGKLCLVNVKGAEGAVYDVVANTWDD-MREGMVRGWRGPVAA-MD 294 (387)
Q Consensus 219 yd~~t~~~~~~W~~~~--~~~~~~~~~~~~~~v~~~g~lyv~gg~~~~i~~yD~~~~~W~~-~~~~~~~~~~~~~~~-~~ 294 (387)
+|+.+.. -..+- .+|..... .......++.+.+.|..+..+.++|+.+++-.. +... ... ....++ ..
T Consensus 265 Wd~~tgk----~l~v~~~~~p~Gh~~--~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH-~~~-vvs~vafSP 336 (356)
T 2w18_A 265 INPKTTL----SVGVMLYCLPPGQAG--RFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPV-SDQ-HWSFVKWSG 336 (356)
T ss_dssp EETTTTE----EEEEEEECCCTTCCC--CEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC---C-CCCEEEECS
T ss_pred EECCCCE----EEEEEEeeccCCCcc--eeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCC-CCC-eEEEEEECC
Confidence 8998775 32211 11222110 011112223444555555789999998886543 2211 111 011223 33
Q ss_pred CCeEEEEeCCCCeEEEEeC
Q 044903 295 EEVLYGIDENSCTLSKYDE 313 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~ 313 (387)
+|+..+-|+.++.|++||.
T Consensus 337 DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 337 TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SSSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEECCCcEEEecC
Confidence 5677777888899999985
No 323
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=60.20 E-value=18 Score=33.01 Aligned_cols=101 Identities=5% Similarity=-0.150 Sum_probs=53.7
Q ss_pred CCEEEEEeeeCC----eEEEEECCCCceeeccccccCCCCCcEEEE--eCCeEEEEeC---------CCCeEEEEeCCCC
Q 044903 252 KGKLCLVNVKGA----EGAVYDVVANTWDDMREGMVRGWRGPVAAM--DEEVLYGIDE---------NSCTLSKYDEVMD 316 (387)
Q Consensus 252 ~g~lyv~gg~~~----~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~--~~g~ly~~g~---------~~~~v~~yd~~~~ 316 (387)
..++|+.....+ .+.++|+++++= +.. ++.+.. +.+++ .+.++|+... .++.|.+||+.+.
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v--~~~-i~vG~~-P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVT--LGH-SLGAFL-SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEE--EEE-EEECTT-CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CCeEEEECCccCCccceEEEEECCCCeE--EEE-EeCCCC-CceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 357888766543 777889876533 322 222322 23333 3567898852 2457999999886
Q ss_pred ceEEccccc---c---ccCceeE-EEeCC-eEEEEecC-CceEEE--EEec
Q 044903 317 DWKEVVKSD---L---LKGARHA-AAGGG-RVCAVCEN-GGGIVV--VDVK 356 (387)
Q Consensus 317 ~W~~v~~~~---~---~~~~~~~-~~~~~-~l~v~gg~-~~~i~v--~d~~ 356 (387)
+=..-...+ + ....+.+ +.-+| .+||.... +..+.+ +|+.
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 533221122 1 1122222 33344 56666433 455667 7775
No 324
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=59.61 E-value=16 Score=30.75 Aligned_cols=106 Identities=13% Similarity=0.046 Sum_probs=54.8
Q ss_pred eCCEEEEEcCccCCCCCCCCccEEEe--CC-------------CCceeeCCCC--CCCceeeeEEe-eCCEEEEEecCCC
Q 044903 145 LSGKLILLAATTHNFNPALTRPLIFD--PI-------------CRTWTFGPEL--VTPRRWCAAGY-SRGAVYVASGIGS 206 (387)
Q Consensus 145 ~~~~l~v~GG~~~~~~~~~~~~~vyd--p~-------------t~~W~~l~~~--~~~r~~~~~~~-~~~~iyv~GG~~~ 206 (387)
.++++|++-| +.+|+|+ +. +..|.-||.- +... .++... .++++|++-|.
T Consensus 71 ~~g~~~fFKg---------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~I-DAA~~~~~~~k~yfFkG~-- 138 (227)
T 3lp9_A 71 ENNEAFIFYE---------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGI-DAAYRSTRGKEVYLFKGD-- 138 (227)
T ss_dssp STTEEEEEET---------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCC-SEEEECSSTTEEEEEETT--
T ss_pred CCCEEEEEeC---------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcc-cEEEEECCCCEEEEEECC--
Confidence 6889999987 4678887 32 1224434321 2221 111111 36899998763
Q ss_pred CCCCCCCceEEEEeCCCCccccCe-EEcC-CCCCCc---ccccceeEEEE---CCEEEEEeeeCCeEEEEECCCC
Q 044903 207 QFSSDVAKSVEKWDLMNGEKNSRW-EKTG-ELKDGR---FSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN 273 (387)
Q Consensus 207 ~~~~~~~~~v~vyd~~t~~~~~~W-~~~~-~~~~~~---~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~ 273 (387)
..++||..+++..-.. +.+. .+|... . .....+|.. +|++|++-| ..-+.||..++
T Consensus 139 --------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~-p~~iDAA~~~~~~g~~YfFkg--~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 --------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIF-ESGADAAFASHKTNEVYFFKD--DHYARVKVTPX 202 (227)
T ss_dssp --------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGG-GGCCSEEEECSSTTEEEEEET--TEEEEEECCSS
T ss_pred --------EEEEEeCCCccccCCCCeEHHHCCCCcccccc-CCCccEEEEcCCCceEEEEEC--CEEEEEECCcc
Confidence 5678887654400000 0111 111100 0 022345553 589999855 46788998776
No 325
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=58.21 E-value=43 Score=30.48 Aligned_cols=102 Identities=10% Similarity=0.008 Sum_probs=57.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCC------ceeecc-----ccc-cCCCCCcEEEEeCCeEEEEeC-C-------CCeEEEE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVAN------TWDDMR-----EGM-VRGWRGPVAAMDEEVLYGIDE-N-------SCTLSKY 311 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~------~W~~~~-----~~~-~~~~~~~~~~~~~g~ly~~g~-~-------~~~v~~y 311 (387)
++.+|++.. ..+.+.|..++ .|.... ... +.+.......-.++++|+... . .+.+.++
T Consensus 222 ~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~Vi 299 (368)
T 1mda_H 222 PGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSV 299 (368)
T ss_dssp TTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEE
T ss_pred CCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEE
Confidence 456666654 57888888643 344321 111 122111222234568998532 2 2356699
Q ss_pred eCCCCceEEccccccccCceeEEE-eCC-eEEEEec-CCceEEEEEecC
Q 044903 312 DEVMDDWKEVVKSDLLKGARHAAA-GGG-RVCAVCE-NGGGIVVVDVKA 357 (387)
Q Consensus 312 d~~~~~W~~v~~~~~~~~~~~~~~-~~~-~l~v~gg-~~~~i~v~d~~~ 357 (387)
|+++.+ .+...+......+++. -+| ++|+..+ .++.+.|+|..+
T Consensus 300 D~~t~~--vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 300 TASVGQ--TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp ESSSCC--EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred ECCCCe--EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 998874 3334333333444443 355 4888887 689999999994
No 326
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=57.34 E-value=1.1e+02 Score=27.65 Aligned_cols=65 Identities=11% Similarity=0.033 Sum_probs=38.9
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceee-----ccccc-cCCCCCcEEEEe-CCeEEEEeCCCCeEEEEeCCCCceEE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDD-----MREGM-VRGWRGPVAAMD-EEVLYGIDENSCTLSKYDEVMDDWKE 320 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~~~~-~~~~~~~~~~~~-~g~ly~~g~~~~~v~~yd~~~~~W~~ 320 (387)
++++|++-| ...+.||..+++-.. +...+ .....-.++... ++++|++-+ ...++||..+.+-..
T Consensus 284 ~~~~yfFkG--~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFkg--~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 284 FYRTYFFVD--NQYWRYDERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQG--SNQFEYDFLLQRITK 355 (365)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEET--TEEEEEETTTTEEEE
T ss_pred CCEEEEEEC--CEEEEEeCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEeC--CEEEEEECCccEEec
Confidence 589999855 467899986653221 10001 011112344444 789999954 579999998775544
No 327
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=57.22 E-value=91 Score=26.60 Aligned_cols=191 Identities=10% Similarity=0.018 Sum_probs=97.2
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCCceeeCCCCCCCceeeeEEeeC-CEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICRTWTFGPELVTPRRWCAAGYSR-GAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
++.||++... ...++.+|+.-+.+++++- .-....-+.+..+ +.++|.. .. ...+.+|+...+
T Consensus 38 ~~~L~aV~d~-------~~~I~~ld~~g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs~-E~-------~~~l~~~~v~~~ 101 (255)
T 3qqz_A 38 SNTLFSTINK-------PAAIVEMTTNGDLIRTIPL-DFVKDLETIEYIGDNQFVISD-ER-------DYAIYVISLTPN 101 (255)
T ss_dssp TTEEEEEEET-------TEEEEEEETTCCEEEEEEC-SSCSSEEEEEECSTTEEEEEE-TT-------TTEEEEEEECTT
T ss_pred CCEEEEEECC-------CCeEEEEeCCCCEEEEEec-CCCCChHHeEEeCCCEEEEEE-CC-------CCcEEEEEcCCC
Confidence 5678887642 2568999998666776532 1112333444444 4544542 11 135566665444
Q ss_pred ccccCeE-EcCCCCC-CcccccceeEEEE---CCEEEEEeeeCC-eEEEEEC--CCCceeeccc-cc--cCCCCC-cEEE
Q 044903 225 EKNSRWE-KTGELKD-GRFSREAIDAVGW---KGKLCLVNVKGA-EGAVYDV--VANTWDDMRE-GM--VRGWRG-PVAA 292 (387)
Q Consensus 225 ~~~~~W~-~~~~~~~-~~~~~~~~~~v~~---~g~lyv~gg~~~-~i~~yD~--~~~~W~~~~~-~~--~~~~~~-~~~~ 292 (387)
... |. ....++. .......+.+.++ +++||+...... .++.|+- .++.-+.+.. .+ ...... .+++
T Consensus 102 ~~i--~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 102 SEV--KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp CCE--EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred Cee--eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 311 31 1111111 0111223556665 458999877764 7888872 1211111100 00 001112 2333
Q ss_pred Ee--CCeEEEEeCCCCeEEEEeCCCCceEEcccccc--------ccCceeEE-EeCCeEEEEecCCceEEEEEec
Q 044903 293 MD--EEVLYGIDENSCTLSKYDEVMDDWKEVVKSDL--------LKGARHAA-AGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 293 ~~--~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~--------~~~~~~~~-~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+. .+++|++...+..+..+|.+.+.=..+ .+.. ...+-+++ .-+|.|||++ ..+-+|++...
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~-~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~~~ 252 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLVGEVIGEM-SLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFTPQ 252 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTCCEEEEE-ECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEEC-
T ss_pred EcCCCCeEEEEECCCCeEEEEcCCCCEEEEE-EcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEEec
Confidence 32 468999998888999999886622222 2221 11222333 3478999995 44577877654
No 328
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=55.51 E-value=1.3e+02 Score=28.03 Aligned_cols=63 Identities=16% Similarity=0.171 Sum_probs=39.3
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceee-----cc---ccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDD-----MR---EGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKE 320 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~-----~~---~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~ 320 (387)
++++|++-| ...+.||..+++-.. +. ++++. .-.++...+|++|++-+ ...++||..+.+=..
T Consensus 367 ~~k~yfFkG--~~yw~yd~~~~~~~~gYPk~I~~~fpgip~--~iDAA~~~~g~~YFFkg--~~ywr~d~~~~~v~~ 437 (450)
T 1su3_A 367 TGKTYFFVA--NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH--KVDAVFMKDGFFYFFHG--TRQYKFDPKTKRILT 437 (450)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCSEEHHHHSTTSCS--CCSEEEEETTEEEEEET--TEEEEEETTTTEEEE
T ss_pred CCeEEEEeC--CEEEEEeCCCccccCCCCcchhhcCCCCCC--CccEEEEcCCeEEEEeC--CEEEEEECCcceEec
Confidence 589999865 578999976543221 11 11111 12344556889999954 578999988775443
No 329
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=54.34 E-value=1.1e+02 Score=26.88 Aligned_cols=68 Identities=12% Similarity=0.009 Sum_probs=36.3
Q ss_pred CCE-EEEEeeeCC-----eEEEEECC-CCceeeccc---cccCCCCCcEEEE---eCCeEEEEeCCCCeEEEEeCCCCce
Q 044903 252 KGK-LCLVNVKGA-----EGAVYDVV-ANTWDDMRE---GMVRGWRGPVAAM---DEEVLYGIDENSCTLSKYDEVMDDW 318 (387)
Q Consensus 252 ~g~-lyv~gg~~~-----~i~~yD~~-~~~W~~~~~---~~~~~~~~~~~~~---~~g~ly~~g~~~~~v~~yd~~~~~W 318 (387)
+|+ ||+.+.... .+.+||.. +++...+.. .......+.+..- .++.||+....++.|.+|+.+.+.-
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTEE
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhhC
Confidence 564 665543333 78999885 455443211 0111111222222 3566777766568899998876643
Q ss_pred E
Q 044903 319 K 319 (387)
Q Consensus 319 ~ 319 (387)
+
T Consensus 345 ~ 345 (365)
T 1jof_A 345 H 345 (365)
T ss_dssp E
T ss_pred c
Confidence 3
No 330
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=52.69 E-value=1.3e+02 Score=26.91 Aligned_cols=106 Identities=12% Similarity=0.038 Sum_probs=56.5
Q ss_pred EEECCEEEEEeeeCCeEEEEECCCCceeeccc--cccCCCCCcE-EEEe-----CCeEEEEeCC---C----CeEEEEeC
Q 044903 249 VGWKGKLCLVNVKGAEGAVYDVVANTWDDMRE--GMVRGWRGPV-AAMD-----EEVLYGIDEN---S----CTLSKYDE 313 (387)
Q Consensus 249 v~~~g~lyv~gg~~~~i~~yD~~~~~W~~~~~--~~~~~~~~~~-~~~~-----~g~ly~~g~~---~----~~v~~yd~ 313 (387)
+.-+|+|||.... ..|.++|.. .+ +.+.. ....+..++. +++. ++.||+.... . ..|.+|+.
T Consensus 36 ~~pdG~l~V~e~~-g~I~~~d~~-G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~ 112 (354)
T 3a9g_A 36 PLGGGRYLVTERP-GRLVLISPS-GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRL 112 (354)
T ss_dssp EEETTEEEEEETT-TEEEEECSS-CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred EcCCCeEEEEeCC-CEEEEEeCC-Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEE
Confidence 3447888887433 577888743 33 43321 1112222333 4444 3689987532 2 56899987
Q ss_pred CCC--c---eEEcc-ccccc---cCceeEEEeCCeEEEEecCC-------------ceEEEEEecC
Q 044903 314 VMD--D---WKEVV-KSDLL---KGARHAAAGGGRVCAVCENG-------------GGIVVVDVKA 357 (387)
Q Consensus 314 ~~~--~---W~~v~-~~~~~---~~~~~~~~~~~~l~v~gg~~-------------~~i~v~d~~~ 357 (387)
+.+ . .+.+. ..|.. .....++.-+|+|||..|.. ..|+.+|+..
T Consensus 113 ~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG 178 (354)
T 3a9g_A 113 DGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG 178 (354)
T ss_dssp CSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS
T ss_pred CCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC
Confidence 655 2 33321 12211 11223444588999985531 3688887763
No 331
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.63 E-value=1.4e+02 Score=27.29 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=21.6
Q ss_pred CCeEEEEeCCCCeEEEEeCCCC-ceEEcc
Q 044903 295 EEVLYGIDENSCTLSKYDEVMD-DWKEVV 322 (387)
Q Consensus 295 ~g~ly~~g~~~~~v~~yd~~~~-~W~~v~ 322 (387)
++.+|+.+.....|.+||.+++ .|+...
T Consensus 170 ~~~aYItD~~~~gLIVydl~~~~swRv~~ 198 (381)
T 3q6k_A 170 ETFVYITNFLRGALFIYDHKKQDSWNVTH 198 (381)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ccEEEEEcCCCCcEEEEECCCCcEEEEcc
Confidence 4578988866678999999865 687664
No 332
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=50.77 E-value=1.2e+02 Score=26.12 Aligned_cols=160 Identities=10% Similarity=0.051 Sum_probs=78.7
Q ss_pred CCccEEEeCCCCceeeCCCCCCCceeeeEEeeCC-EEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcc
Q 044903 163 LTRPLIFDPICRTWTFGPELVTPRRWCAAGYSRG-AVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRF 241 (387)
Q Consensus 163 ~~~~~vydp~t~~W~~l~~~~~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~ 241 (387)
...++++|..+.+-+.+ .......-.-++ .|+....... .....++++|..+++ ...+...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~----~~~~~l~~~~~~~g~----~~~l~~~~~--- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEE----KKVSEIWVADLETLS----SKKILEAKN--- 105 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETT----TTEEEEEEEETTTTE----EEEEEEESE---
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccC----CCcceEEEEECCCCc----eEEEEcCCC---
Confidence 35688999988876665 111111111134 4444332211 123367888888877 655543221
Q ss_pred cccceeEEEE--CCE-EEEEeee--------------------------CCeEEEEECCCCce-eeccccccCCCCCcEE
Q 044903 242 SREAIDAVGW--KGK-LCLVNVK--------------------------GAEGAVYDVVANTW-DDMREGMVRGWRGPVA 291 (387)
Q Consensus 242 ~~~~~~~v~~--~g~-lyv~gg~--------------------------~~~i~~yD~~~~~W-~~~~~~~~~~~~~~~~ 291 (387)
.....+ +|+ |++.... ...++++|+.+++. +.+.. + . ....
T Consensus 106 ----~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~-~--~~~~ 176 (347)
T 2gop_A 106 ----IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P-R--FSSG 176 (347)
T ss_dssp ----EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E-T--TCEE
T ss_pred ----ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C-C--cccc
Confidence 112222 454 4444311 14688889988776 55443 1 1 1223
Q ss_pred E-EeCCeEEEEeCC---------CCeEEEEeCCCCceEEccccccccCceeEEEeCCe-EEEEecC-------CceEEEE
Q 044903 292 A-MDEEVLYGIDEN---------SCTLSKYDEVMDDWKEVVKSDLLKGARHAAAGGGR-VCAVCEN-------GGGIVVV 353 (387)
Q Consensus 292 ~-~~~g~ly~~g~~---------~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~~~~~-l~v~gg~-------~~~i~v~ 353 (387)
+ ..+| +++.... ...|+.+| +.+++.+... ...... ..+|+ |++.+.. ...++++
T Consensus 177 ~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~---~~~~~~-spdg~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK---VSFYAV-DSDGERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE---ESEEEE-EECSSCEEEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC---cceeeE-CCCCCEEEEEEccccCCccccceEEEE
Confidence 3 3344 5544421 22578888 6666665432 111222 44555 4444422 2468888
Q ss_pred E
Q 044903 354 D 354 (387)
Q Consensus 354 d 354 (387)
|
T Consensus 250 d 250 (347)
T 2gop_A 250 D 250 (347)
T ss_dssp C
T ss_pred C
Confidence 8
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=48.31 E-value=1.2e+02 Score=28.21 Aligned_cols=94 Identities=7% Similarity=0.018 Sum_probs=47.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec---ccccc--CCCCCc-EEEEe-----CCeEEEEeCC------------CCeE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDM---REGMV--RGWRGP-VAAMD-----EEVLYGIDEN------------SCTL 308 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~---~~~~~--~~~~~~-~~~~~-----~g~ly~~g~~------------~~~v 308 (387)
+|+|||..-.+..|..++..+.+-+.+ +.... .+..+. .+++. ++.||+.... ...|
T Consensus 37 dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v 116 (454)
T 1cru_A 37 DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTII 116 (454)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEE
T ss_pred CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEE
Confidence 567776643333577777654544433 22111 111222 35666 7889998632 2358
Q ss_pred EEEeCCCC--ce---EEcc-ccccc--cCceeE-EEeCCeEEEEec
Q 044903 309 SKYDEVMD--DW---KEVV-KSDLL--KGARHA-AAGGGRVCAVCE 345 (387)
Q Consensus 309 ~~yd~~~~--~W---~~v~-~~~~~--~~~~~~-~~~~~~l~v~gg 345 (387)
.+|+.+.+ .. +.+- ..|.. +....+ +.-+|+|||..|
T Consensus 117 ~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 117 RRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 88865432 22 2332 22321 112233 345889999755
No 334
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=47.01 E-value=1.1e+02 Score=24.72 Aligned_cols=100 Identities=10% Similarity=-0.035 Sum_probs=52.8
Q ss_pred CCEEEEEeeeCCeEEEEECCCCce-eeccc-cccCCCCCcEEEE--eCCeEEEEeCCCCeEEEEeCCCCceEE-----cc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTW-DDMRE-GMVRGWRGPVAAM--DEEVLYGIDENSCTLSKYDEVMDDWKE-----VV 322 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W-~~~~~-~~~~~~~~~~~~~--~~g~ly~~g~~~~~v~~yd~~~~~W~~-----v~ 322 (387)
++++|++-| ...++|+..+..- +.+.. +++......-+|+ .++++|++-+ ...++||..+++=.. +.
T Consensus 64 ~~~~yfFkG--~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg--~~ywr~d~~~~~~~~gyPr~i~ 139 (195)
T 1itv_A 64 SKKLFFFSG--RQVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG--RRLWRFDVKAQMVDPRSASEVD 139 (195)
T ss_dssp TCCEEEEET--TEEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET--TEEEEEETTTTEECGGGCEEHH
T ss_pred CCeEEEEeC--CEEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC--CEEEEEeCCcccccCCCccChh
Confidence 688999865 4667787542111 01111 1221111122232 3579999954 578999987653111 10
Q ss_pred cc-cc-ccCceeEEEeCCeEEEEecCCceEEEEEecC
Q 044903 323 KS-DL-LKGARHAAAGGGRVCAVCENGGGIVVVDVKA 357 (387)
Q Consensus 323 ~~-~~-~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~ 357 (387)
.. +. ....-++...+|++|++ .|...+.+|...
T Consensus 140 ~~w~Gvp~~idaa~~~~g~~Yff--kg~~y~~~~~~~ 174 (195)
T 1itv_A 140 RMFPGVPLDTHDVFQFREKAYFC--QDRFYWRVSSRS 174 (195)
T ss_dssp HHSTTSCSSCSEEEEETTEEEEE--ETTEEEEEECCT
T ss_pred hcCCCCCCCCCEEEEeCCeEEEE--eCCEEEEEECCc
Confidence 00 11 11123455567999999 456677777663
No 335
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=46.87 E-value=1.2e+02 Score=25.05 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=51.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCCc--e-eeccc-cccCCC-CCcEEEE--eCCeEEEEeCCCCeEEEEeCCCCceEEc---
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANT--W-DDMRE-GMVRGW-RGPVAAM--DEEVLYGIDENSCTLSKYDEVMDDWKEV--- 321 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~--W-~~~~~-~~~~~~-~~~~~~~--~~g~ly~~g~~~~~v~~yd~~~~~W~~v--- 321 (387)
++++|++-| ...++||-.+.. + +.+.. +++... .-.++.. .++++|++- ....++||..+++-..-
T Consensus 87 ~~k~yfFkG--~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFk--G~~ywr~d~~~~~v~~gyPr 162 (218)
T 1gen_A 87 EEKAVFFAG--NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA--GDKFWRYNEVKKKMDPGFPK 162 (218)
T ss_dssp TTEEEEEET--TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEE--TTEEEEEETTTTEECSSCCE
T ss_pred CCEEEEEeC--CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEE--CCEEEEEECccccccCCCCc
Confidence 689999855 467888852100 0 01111 111111 1223333 368999995 45799999876632211
Q ss_pred --cc-cc-cccCceeEEEeC--CeEEEEecCCceEEEEEec
Q 044903 322 --VK-SD-LLKGARHAAAGG--GRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 322 --~~-~~-~~~~~~~~~~~~--~~l~v~gg~~~~i~v~d~~ 356 (387)
.. -+ .....-++.... |++|++ .|...+.+|..
T Consensus 163 ~i~~~w~g~p~~idaAf~~~~~g~~YfF--kg~~y~~~~~~ 201 (218)
T 1gen_A 163 LIADAWNAIPDNLDAVVDLQGGGHSYFF--KGAYYLKLENQ 201 (218)
T ss_dssp EHHHHSSSCCSSCSEEEECTTTCEEEEE--ETTEEEEEETT
T ss_pred chhhccCCCCCCCCEEEEEcCCCcEEEE--ECCEEEEEECC
Confidence 00 00 011122344444 899999 45566666665
No 336
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=46.47 E-value=1.2e+02 Score=25.01 Aligned_cols=60 Identities=10% Similarity=-0.067 Sum_probs=35.9
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-----c---ccccCCCCCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-----R---EGMVRGWRGPVAAMD--EEVLYGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-----~---~~~~~~~~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~ 317 (387)
+|++|++-| ...+.||..+++=..- . .+++.. -.++... +|.+|++- ....++||..++.
T Consensus 135 ~g~~YfFkG--~~ywr~d~~~~~v~~gyPr~i~~~w~g~p~~--idaAf~~~~~g~~YfFk--g~~y~~~~~~~~~ 204 (218)
T 1gen_A 135 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDN--LDAVVDLQGGGHSYFFK--GAYYLKLENQSLK 204 (218)
T ss_dssp TTEEEEEET--TEEEEEETTTTEECSSCCEEHHHHSSSCCSS--CSEEEECTTTCEEEEEE--TTEEEEEETTEEE
T ss_pred CCeEEEEEC--CEEEEEECccccccCCCCcchhhccCCCCCC--CCEEEEEcCCCcEEEEE--CCEEEEEECCcee
Confidence 689999855 4678999876532211 1 011111 2233333 38999995 4578899887654
No 337
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=45.70 E-value=1.8e+02 Score=26.55 Aligned_cols=97 Identities=11% Similarity=-0.057 Sum_probs=53.4
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCce
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGAR 331 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~ 331 (387)
++...+++ .+..+.+||+.+..-........... ..+......+.++ ..+|.+.+||.++..-..+ ....
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v--~~i~~~~p~~av~-~~dG~L~v~dl~~~~~~~~------~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPV--FQLKNVNNTLVIL-NSVNDLSALDLRTKSTKQL------AQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCE--EEEEECSSEEEEE-ETTSEEEEEETTTCCEEEE------EESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccceeecce--eeEEecCCCEEEE-ECCCCEEEEEccCCccccc------cCCc
Confidence 65554454 55789999987655222111111111 1222233344444 4679999999987654432 2234
Q ss_pred eEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 332 HAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 332 ~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
.++.+..+=.++|..++.+..|++...
T Consensus 166 s~v~WSpkG~~vg~~dg~i~~~~~~~~ 192 (388)
T 1xip_A 166 TSFDVTNSQLAVLLKDRSFQSFAWRNG 192 (388)
T ss_dssp EEEEECSSEEEEEETTSCEEEEEEETT
T ss_pred eEEEEcCCceEEEEcCCcEEEEcCCCc
Confidence 445443333566667788888888754
No 338
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=44.63 E-value=1.8e+02 Score=26.20 Aligned_cols=154 Identities=17% Similarity=0.173 Sum_probs=74.0
Q ss_pred CCEEEEEecCCCC----CCCCCCceEEEEeCCCCccccCeEEcCCC---CC-CcccccceeEEE-E--CC--EEEEEeee
Q 044903 195 RGAVYVASGIGSQ----FSSDVAKSVEKWDLMNGEKNSRWEKTGEL---KD-GRFSREAIDAVG-W--KG--KLCLVNVK 261 (387)
Q Consensus 195 ~~~iyv~GG~~~~----~~~~~~~~v~vyd~~t~~~~~~W~~~~~~---~~-~~~~~~~~~~v~-~--~g--~lyv~gg~ 261 (387)
++.+|+..|.-.+ ++......+.+||+.+.... -.++.-. +. ..+ ..|.... - +| +||++...
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~--~~~l~~~g~~~~~~~f--~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA--VSELEIIGNTLDISSF--NPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCC--EEECEEECSSCCGGGC--CEEEEEEEECTTCCEEEEEEECS
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc--eEEEEccCCCCCcCce--eeeeeEEEECCCCcEEEEEEECC
Confidence 5677777653211 01123557899998743211 3333311 11 111 1233332 2 35 57888554
Q ss_pred C--CeEEE--EECCCCceeeccc--cccCCCCCcEEEEeCCeEEEEeC-----------------CCCeEEEEeCCCCce
Q 044903 262 G--AEGAV--YDVVANTWDDMRE--GMVRGWRGPVAAMDEEVLYGIDE-----------------NSCTLSKYDEVMDDW 318 (387)
Q Consensus 262 ~--~~i~~--yD~~~~~W~~~~~--~~~~~~~~~~~~~~~g~ly~~g~-----------------~~~~v~~yd~~~~~W 318 (387)
. ..+++ +|+..+....+.. +.+........+..+|.+|+-+. ..+.+++||+. +.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~ 213 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DV 213 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CC
T ss_pred CCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eE
Confidence 2 45555 5555555544432 11222222344556788887643 12569999984 34
Q ss_pred EEccccccccCceeEE-EeCC-eEEEEecCCceEEEEEec
Q 044903 319 KEVVKSDLLKGARHAA-AGGG-RVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~-~~~~-~l~v~gg~~~~i~v~d~~ 356 (387)
+.+.. ....+-+++ .-++ .+||.-.....|++||..
T Consensus 214 ~~~~~--~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 214 RVVAE--GFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEeec--CCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 44321 122222333 2344 577765556778888776
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=43.44 E-value=78 Score=26.70 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=38.3
Q ss_pred CCEEEEEeeeCCeEEEEECCC---Cceeecccccc-CCCC--CcEEEEeCCeEEEEeCCCCeEEEEeC---CCCceE
Q 044903 252 KGKLCLVNVKGAEGAVYDVVA---NTWDDMREGMV-RGWR--GPVAAMDEEVLYGIDENSCTLSKYDE---VMDDWK 319 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~---~~W~~~~~~~~-~~~~--~~~~~~~~g~ly~~g~~~~~v~~yd~---~~~~W~ 319 (387)
+|.||.+ ....++..++.+ +.|......+. .+|. .....-.+|.||.+ .++.|++.++ ..+.|.
T Consensus 51 ~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl 123 (236)
T 1tl2_A 51 GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWI 123 (236)
T ss_dssp TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHH
T ss_pred CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCcee
Confidence 6888888 334678888744 46755432121 1332 22233346789999 4589999987 235673
No 340
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=36.49 E-value=3.3e+02 Score=27.05 Aligned_cols=197 Identities=8% Similarity=-0.106 Sum_probs=0.0
Q ss_pred CCEEEEEcCccCCCCCCCCccEEEeCCCC-ceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEEEeCCCC
Q 044903 146 SGKLILLAATTHNFNPALTRPLIFDPICR-TWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEKWDLMNG 224 (387)
Q Consensus 146 ~~~l~v~GG~~~~~~~~~~~~~vydp~t~-~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~ 224 (387)
+|+.+++.-... ......+++.|..++ + .++...........-.-+++-+++..... ......++.++..+.
T Consensus 185 DG~~lAy~~~~~--G~~~~~l~v~dl~~g~~--~l~~~~~~~~~~~~WspDg~~l~y~~~d~---~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 185 EHDLVAFSVDMS--GNEVYTIEFKRISDPSQ--TIADKVSGTNGEIVWGPDHTSLFYVTKDE---TLRENKVWRHVMGKL 257 (751)
T ss_dssp TTCEEEEEEESS--SSSCEEEEEEETTCTTC--CCCCCEEEECSCCEECSSTTEEEEEEECT---TCCEEEEEEEETTSC
T ss_pred CCCEEEEEEeCC--CCceEEEEEEECCCCCE--eCCccccCceeeEEEecCCCEEEEEEECC---CCCCCEEEEEECCCC
Q ss_pred ccccCeEEcCCCCCCcccccceeEEEECCEEEEEeeeC---CeEEEEECCCC--ce--eeccccccCCCCCcEEE-EeCC
Q 044903 225 EKNSRWEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVAN--TW--DDMREGMVRGWRGPVAA-MDEE 296 (387)
Q Consensus 225 ~~~~~W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~---~~i~~yD~~~~--~W--~~~~~~~~~~~~~~~~~-~~~g 296 (387)
+ =....-...+...........-+|+..++.... ..++.+|+.+. .+ +.+....... ..+.. ..++
T Consensus 258 ~----~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~--~~s~~~~~g~ 331 (751)
T 2xe4_A 258 Q----SEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV--RYDVQMHGTS 331 (751)
T ss_dssp G----GGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC--CEEEEEETTT
T ss_pred c----hhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc--eEEEeeeeCC
Q ss_pred eEEEEeCCC----CeEEEEeCCC-CceEE-ccccccccCceeEEEeCCeEEEEecCC--ceEEEEEe
Q 044903 297 VLYGIDENS----CTLSKYDEVM-DDWKE-VVKSDLLKGARHAAAGGGRVCAVCENG--GGIVVVDV 355 (387)
Q Consensus 297 ~ly~~g~~~----~~v~~yd~~~-~~W~~-v~~~~~~~~~~~~~~~~~~l~v~gg~~--~~i~v~d~ 355 (387)
.||+....+ ..|+.+|.++ ..|+. +...........+...++.|++....+ ..++++|+
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
No 341
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=35.73 E-value=1.7e+02 Score=28.59 Aligned_cols=81 Identities=12% Similarity=0.078 Sum_probs=53.4
Q ss_pred eCCeEEEEeCCCCeEEEEeCCCCceEEccccccccCceeEEE----eCCeEEEEecC-----------------CceEEE
Q 044903 294 DEEVLYGIDENSCTLSKYDEVMDDWKEVVKSDLLKGARHAAA----GGGRVCAVCEN-----------------GGGIVV 352 (387)
Q Consensus 294 ~~g~ly~~g~~~~~v~~yd~~~~~W~~v~~~~~~~~~~~~~~----~~~~l~v~gg~-----------------~~~i~v 352 (387)
.|..+|+....+..|.+.|+++.+=.++...|...+.+.++. -++++|+-+.. .+.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 356799988777889999999987666666666666666663 35666666421 246888
Q ss_pred EEecCCCCCceeEEcCCCCceeeE
Q 044903 353 VDVKAAAAPTIFVVDTPLGFEALS 376 (387)
Q Consensus 353 ~d~~~~~~~~~W~~~~~~~~~~~~ 376 (387)
+|.++. .-.|++.++...+.+.
T Consensus 180 ID~~t~--~v~~qI~Vgg~pd~~~ 201 (595)
T 1fwx_A 180 VDADKW--EVAWQVLVSGNLDNCD 201 (595)
T ss_dssp EETTTT--EEEEEEEESSCCCCEE
T ss_pred EECCCC--eEEEEEEeCCCccceE
Confidence 898842 3458875543434333
No 342
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=34.65 E-value=3.5e+02 Score=26.70 Aligned_cols=136 Identities=12% Similarity=0.029 Sum_probs=69.9
Q ss_pred CceEEEEeCCCCccccC-eEEcCCCCCCcccccceeEEEECCEEEEEeeeC---CeEEEEECCC--CceeeccccccCCC
Q 044903 213 AKSVEKWDLMNGEKNSR-WEKTGELKDGRFSREAIDAVGWKGKLCLVNVKG---AEGAVYDVVA--NTWDDMREGMVRGW 286 (387)
Q Consensus 213 ~~~v~vyd~~t~~~~~~-W~~~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~---~~i~~yD~~~--~~W~~~~~~~~~~~ 286 (387)
...++++|..+.. .. |..+..-.... .......++.||+....+ ..+..+|+.+ ..|+.+-......
T Consensus 293 ~~~l~~~d~~~~~--~~~~~~l~~~~~~~----~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~- 365 (741)
T 1yr2_A 293 VNTVHVARVTNGK--IGPVTALIPDLKAQ----WDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN- 365 (741)
T ss_dssp CCEEEEEEEETTE--ECCCEEEECSSSSC----EEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE-
T ss_pred cceEEEEECCCCC--CcccEEecCCCCce----EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe-
Confidence 4577888876641 01 45554222111 112223567788775432 6799999887 5788764322111
Q ss_pred CCcEEEEeCCeEEEEeCCCC--eEEEEeCCCCceEEccccccccCceeEEE--eCC-eEEEEecC---CceEEEEEecCC
Q 044903 287 RGPVAAMDEEVLYGIDENSC--TLSKYDEVMDDWKEVVKSDLLKGARHAAA--GGG-RVCAVCEN---GGGIVVVDVKAA 358 (387)
Q Consensus 287 ~~~~~~~~~g~ly~~g~~~~--~v~~yd~~~~~W~~v~~~~~~~~~~~~~~--~~~-~l~v~gg~---~~~i~v~d~~~~ 358 (387)
-..+...++++++....++ .|+++|.+...-..+.. +. ......+. -++ .|++.... -..++.+|+.++
T Consensus 366 -l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 366 -LESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp -EEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBC-SS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred -EEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccC-CC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 1123445778887765555 47778876553333321 11 11111111 234 35444221 256888888754
No 343
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=34.12 E-value=3.4e+02 Score=26.41 Aligned_cols=71 Identities=14% Similarity=0.262 Sum_probs=37.1
Q ss_pred CCEEEEEeeeC----CeEEEEE----CCCCceeeccc---cccCCCCC-----cEEEEeCC-eEEEE-eCCCC--eEEEE
Q 044903 252 KGKLCLVNVKG----AEGAVYD----VVANTWDDMRE---GMVRGWRG-----PVAAMDEE-VLYGI-DENSC--TLSKY 311 (387)
Q Consensus 252 ~g~lyv~gg~~----~~i~~yD----~~~~~W~~~~~---~~~~~~~~-----~~~~~~~g-~ly~~-g~~~~--~v~~y 311 (387)
|+++++..... ..+..+| +.++++..+-. ....++-. ......+| .+++. ...++ .|+.|
T Consensus 263 D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~ 342 (719)
T 1z68_A 263 DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYI 342 (719)
T ss_dssp SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEE
Confidence 67766553221 4588889 77776665431 11122211 12222344 45553 33333 58999
Q ss_pred eCCCCceEEcc
Q 044903 312 DEVMDDWKEVV 322 (387)
Q Consensus 312 d~~~~~W~~v~ 322 (387)
|.++.+.+.+.
T Consensus 343 ~~~~~~~~~lt 353 (719)
T 1z68_A 343 KDTVENAIQIT 353 (719)
T ss_dssp SSCSTTCEECS
T ss_pred ECCCCceEecc
Confidence 99887765554
No 344
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=33.56 E-value=2e+02 Score=23.74 Aligned_cols=144 Identities=18% Similarity=0.140 Sum_probs=71.9
Q ss_pred eeEEE--eCCEEEEEcCccCCCCCCCCccEEEeCC---------CCceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCC
Q 044903 140 VQLVS--LSGKLILLAATTHNFNPALTRPLIFDPI---------CRTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQF 208 (387)
Q Consensus 140 ~~~~~--~~~~l~v~GG~~~~~~~~~~~~~vydp~---------t~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~ 208 (387)
+.++. .++.+|++-| +.+|+++.. +..|..|| ... -++...++++|++-|.
T Consensus 20 ~DAi~~~~~g~~yfFkg---------~~~Wr~~~~~~~~~p~~Is~~wpgLP---~~I--DAA~~~~~~~yfFkG~---- 81 (219)
T 1hxn_A 20 LSAMVSDNHGATYVFSG---------SHYWRLDTNRDGWHSWPIAHQWPQGP---STV--DAAFSWEDKLYLIQDT---- 81 (219)
T ss_dssp CCEEEECTTSCEEEEET---------TEEEESSSSSCTTCCEEGGGTCTTSC---SSC--SEEEEETTEEEEEETT----
T ss_pred EeEEEECCCCcEEEEeC---------CEEEEEcCCCCCCCceEhhhhccCCC---CCc--cEEEEECCcEEEecCC----
Confidence 55555 4788999977 234554432 33454443 221 1223348999998663
Q ss_pred CCCCCceEEEEeCCCCc-cccCe-EEcC---CCCCCcccccceeEEEE---CCEEEEEeeeCCeEEEEECCCC---ceee
Q 044903 209 SSDVAKSVEKWDLMNGE-KNSRW-EKTG---ELKDGRFSREAIDAVGW---KGKLCLVNVKGAEGAVYDVVAN---TWDD 277 (387)
Q Consensus 209 ~~~~~~~v~vyd~~t~~-~~~~W-~~~~---~~~~~~~~~~~~~~v~~---~g~lyv~gg~~~~i~~yD~~~~---~W~~ 277 (387)
.+++|+..++. ..... +.+. .+|.. .......+|.. +|++|++-| ...+.||..+. .|..
T Consensus 82 ------~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~-~~~~~IDAA~~~~~~gk~yfFkG--~~ywr~d~~~~P~~i~~~ 152 (219)
T 1hxn_A 82 ------KVYVFLTKGGYTLVNGYPKRLEKELGSPPV-ISLEAVDAAFVCPGSSRLHIMAG--RRLWWLDLKSGAQATWTE 152 (219)
T ss_dssp ------EEEEEECSSSCEECTTCCEEHHHHHCCCSS-CCCSCCCEEECCTTCCEEEEEET--TEEEEEEGGGGGGCCCEE
T ss_pred ------EEEEEeCCCCceecCCCCeehhhccCCCCc-ccccccceeEEecCCCEEEEEeC--CEEEEEeCCCCceEhhhc
Confidence 46777754321 00000 1111 12221 00111344443 589999966 46789997542 3332
Q ss_pred ccccccCCCCCcEEEE------------eCCeEEEEeCCCCeEEEEeCCC
Q 044903 278 MREGMVRGWRGPVAAM------------DEEVLYGIDENSCTLSKYDEVM 315 (387)
Q Consensus 278 ~~~~~~~~~~~~~~~~------------~~g~ly~~g~~~~~v~~yd~~~ 315 (387)
.+. ++.. -.++.. .++.+|++-+ ...++||..+
T Consensus 153 ~~g-~p~~--vdAa~~~~~~~~~~~~~~~~~~~YFFkg--~~y~r~~~~~ 197 (219)
T 1hxn_A 153 LPW-PHEK--VDGALCMEKPLGPNSCSTSGPNLYLIHG--PNLYCYRHVD 197 (219)
T ss_dssp ECC-SCSC--CSEEEEESSCSSSCCSCSSSCEEEEEET--TEEEEESSHH
T ss_pred CCC-CCCC--cCEEEEccccccccceeccCCeEEEEEC--CEEEEEeCCc
Confidence 221 1111 122333 3467999954 4778887743
No 345
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=33.32 E-value=2e+02 Score=23.53 Aligned_cols=101 Identities=8% Similarity=-0.044 Sum_probs=53.5
Q ss_pred CCEEEEEeeeCCeEEEEECCCCce---eeccc-cccCCCCCc-EEEEe--CCeEEEEeCCCCeEEEEeCCCCceEE----
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTW---DDMRE-GMVRGWRGP-VAAMD--EEVLYGIDENSCTLSKYDEVMDDWKE---- 320 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W---~~~~~-~~~~~~~~~-~~~~~--~g~ly~~g~~~~~v~~yd~~~~~W~~---- 320 (387)
+|++|++-| ...++|+..+-.- +.+.. +++...... ++... ++++|++- ....++||..+++=..
T Consensus 79 ~~~iyfFkG--~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFk--G~~ywr~d~~~~~~d~gyPr 154 (207)
T 1pex_A 79 HDLIFIFRG--RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFS--GNQVWRYDDTNHIMDKDYPR 154 (207)
T ss_dssp TTEEEEEET--TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEE--TTEEEEEETTTTEECSSCCC
T ss_pred CCcEEEEcc--CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEe--CCEEEEEeCcCccccCCCCc
Confidence 589999965 4667776322110 11111 122211112 33322 47999995 4589999987653110
Q ss_pred -ccc-ccc-ccCceeEEEeCCeEEEEecCCceEEEEEecCC
Q 044903 321 -VVK-SDL-LKGARHAAAGGGRVCAVCENGGGIVVVDVKAA 358 (387)
Q Consensus 321 -v~~-~~~-~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~~~ 358 (387)
+.. -+. ....-+++..+|++|++ .|...+.||....
T Consensus 155 ~i~~~~~Gip~~iDaAf~~~g~~YfF--kg~~y~rf~~~~~ 193 (207)
T 1pex_A 155 LIEEDFPGIGDKVDAVYEKNGYIYFF--NGPIQFEYSIWSN 193 (207)
T ss_dssp BHHHHSTTSCSCCSEEEEETTEEEEE--ETTEEEEEETTTT
T ss_pred cHHHcCCCCCCCccEEEEcCCcEEEE--ECCEEEEEeCCcc
Confidence 000 000 11122444579999999 5667788887643
No 346
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=32.69 E-value=3.9e+02 Score=26.70 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=51.0
Q ss_pred eEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEECC-CCceeeccccccC--------------------
Q 044903 230 WEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDVV-ANTWDDMREGMVR-------------------- 284 (387)
Q Consensus 230 W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~~~~-------------------- 284 (387)
|+.+..++...........+.+ .+.+|+....+..++ +..+ -.+|+.+.. .+.
T Consensus 167 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~-~S~DgG~tW~~~~~-~~~~~~~~~~~~~~p~~~~~~~~ 244 (763)
T 3a0f_A 167 WSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLW-VTWDGGANWSQVGG-QPTQWSDWTKSIVAASGTAIQSS 244 (763)
T ss_dssp CEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEE-EESSSSSSCEECTT-CCCSCCHHHHHHHHHHCCCCSSS
T ss_pred ccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEE-EECCCCCCccccCC-CccccccccccccccccccccCC
Confidence 9999876643211122333333 246777643221122 2222 348998863 221
Q ss_pred CCCCcEEEEe-CCeEEEEe--------CCCCeEEEEeCCCCceEEccccc
Q 044903 285 GWRGPVAAMD-EEVLYGID--------ENSCTLSKYDEVMDDWKEVVKSD 325 (387)
Q Consensus 285 ~~~~~~~~~~-~g~ly~~g--------~~~~~v~~yd~~~~~W~~v~~~~ 325 (387)
+...+.+++. ++.||+.. +..+.+++.+-...+|+.+...+
T Consensus 245 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 245 GPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp SCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTS
T ss_pred CCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCC
Confidence 1111222332 57889874 23467999998999999987533
No 347
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=31.26 E-value=4.2e+02 Score=26.62 Aligned_cols=94 Identities=10% Similarity=0.178 Sum_probs=50.7
Q ss_pred eEEcCCCCCCcccccceeEEEE----CCEEEEEeeeCCeEEEEECC-CCceeeccccccCCC----------------CC
Q 044903 230 WEKTGELKDGRFSREAIDAVGW----KGKLCLVNVKGAEGAVYDVV-ANTWDDMREGMVRGW----------------RG 288 (387)
Q Consensus 230 W~~~~~~~~~~~~~~~~~~v~~----~g~lyv~gg~~~~i~~yD~~-~~~W~~~~~~~~~~~----------------~~ 288 (387)
|+.+..++...........+.+ .+.+|+.......++ +..+ -.+|+.+.. ++.+. ..
T Consensus 155 W~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~-~S~DgG~TW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (789)
T 1sqj_A 155 WTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMY-VTHDGGVSWEPVAG-QPSSWLNRTTGAFPDKKPASIAP 232 (789)
T ss_dssp CEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEE-EESSTTSSCEECTT-CCCSCCHHHHHTSTTCCCSSSSC
T ss_pred cCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEE-EEcCCCcCcccCCC-CcCccccccccccCccccccccc
Confidence 9998865421100011333333 246777543211222 2222 348998873 33322 01
Q ss_pred cEEEEe--CCeEEEEe--------CCCCeEEEEeCCCCceEEccccc
Q 044903 289 PVAAMD--EEVLYGID--------ENSCTLSKYDEVMDDWKEVVKSD 325 (387)
Q Consensus 289 ~~~~~~--~g~ly~~g--------~~~~~v~~yd~~~~~W~~v~~~~ 325 (387)
+.+++. ++.||+.. +..+.|++.+-...+|+.+...+
T Consensus 233 ~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~ 279 (789)
T 1sqj_A 233 QPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRV 279 (789)
T ss_dssp EEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCT
T ss_pred ceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCC
Confidence 333332 78899873 34567999998999999987543
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=29.31 E-value=80 Score=28.34 Aligned_cols=62 Identities=11% Similarity=0.096 Sum_probs=34.0
Q ss_pred CeEEEEeCCCCeEEEEeCCCC--ceEEccc--cccccCceeEEEeCCeEEEEe-cCCceEEEEEecCC
Q 044903 296 EVLYGIDENSCTLSKYDEVMD--DWKEVVK--SDLLKGARHAAAGGGRVCAVC-ENGGGIVVVDVKAA 358 (387)
Q Consensus 296 g~ly~~g~~~~~v~~yd~~~~--~W~~v~~--~~~~~~~~~~~~~~~~l~v~g-g~~~~i~v~d~~~~ 358 (387)
+.+|+- ..+|.|+.+|.++. .|+.-.. .|...........++.++++. ..++.++.+|..++
T Consensus 11 ~~V~v~-t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 11 DILIAA-DVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEEEE-ETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred CEEEEE-eCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 444444 35677788876654 5775333 122211111111356777775 36788999998743
No 349
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=29.30 E-value=1.8e+02 Score=28.72 Aligned_cols=101 Identities=8% Similarity=-0.073 Sum_probs=46.9
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-cccccCCCCC-c--EEEEeCCeEEEEeCCC---------CeEEEEeCCCCce
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGWRG-P--VAAMDEEVLYGIDENS---------CTLSKYDEVMDDW 318 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~~~-~--~~~~~~g~ly~~g~~~---------~~v~~yd~~~~~W 318 (387)
+|++++.+ ...+..||+.+++=..+ .......+.. . ....-+|+..++.... +.+++||.++.+-
T Consensus 27 dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 27 DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcE
Confidence 45544443 45788888887754333 1100011111 0 1223345433343221 5688999999876
Q ss_pred EEccccccccCceeEEEeCCeEEEEecCCceEEEEEec
Q 044903 319 KEVVKSDLLKGARHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 319 ~~v~~~~~~~~~~~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+.+...+.. .......-+|+.++++ .+.+|+++|..
T Consensus 105 ~~l~~~~~~-~~~~~~SPdG~~la~~-~~~~i~~~~~~ 140 (740)
T 4a5s_A 105 ITEERIPNN-TQWVTWSPVGHKLAYV-WNNDIYVKIEP 140 (740)
T ss_dssp CCSSCCCTT-EEEEEECSSTTCEEEE-ETTEEEEESST
T ss_pred EEcccCCCc-ceeeEECCCCCEEEEE-ECCeEEEEECC
Confidence 554332211 1122223344433442 34566666654
No 350
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=26.72 E-value=3.9e+02 Score=24.80 Aligned_cols=124 Identities=8% Similarity=-0.042 Sum_probs=64.7
Q ss_pred CCceee--CCCCCCCceeeeEEeeCCEEEEEecCCCCCCCCCCceEEE-EeCCC-Cccc-cCeEEcCCCCCCccccc--c
Q 044903 173 CRTWTF--GPELVTPRRWCAAGYSRGAVYVASGIGSQFSSDVAKSVEK-WDLMN-GEKN-SRWEKTGELKDGRFSRE--A 245 (387)
Q Consensus 173 t~~W~~--l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~v-yd~~t-~~~~-~~W~~~~~~~~~~~~~~--~ 245 (387)
.+.|++ |+-.+..-.-|+.+.+++.-|++|=... ....+.+-. |=+.. +.+. +.=+.+++- +.++ +
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnG---Dv~PRe~G~~yfs~~~~sp~~~vrr~i~se----y~~~AsE 341 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQG---DVAPREVGLFYFPDAFNSPSNYVRRQIPSE----YEPDASE 341 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEEC---SSSSCEEEEEEETTTTTCTTCCEEEECCGG----GCTTEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccC---CCCcceeeEEEecccccCCcceeeeechhh----hcccccc
Confidence 345654 5555655567888888887777764422 111222222 21110 0000 001222211 1112 2
Q ss_pred eeEEEECCEEEEEeeeC------CeEEEEECCCCceeeccccccCCCCCcEEEEeCCeEEEEeC
Q 044903 246 IDAVGWKGKLCLVNVKG------AEGAVYDVVANTWDDMREGMVRGWRGPVAAMDEEVLYGIDE 303 (387)
Q Consensus 246 ~~~v~~~g~lyv~gg~~------~~i~~yD~~~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~ 303 (387)
.+.-.++|+||++.-.. ..+..-+..-+.|+.+.-.-..-......+..++.||+++.
T Consensus 342 PCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 342 PCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp EEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred chhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 34556899999985432 56677777778999876321111122334566889999984
No 351
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=26.57 E-value=2.7e+02 Score=23.00 Aligned_cols=105 Identities=12% Similarity=-0.022 Sum_probs=57.9
Q ss_pred eeEEE--ECCEEEEEeeeCCeEEEEECCC----Cceeecc----c---cccCC--C-CCcEEEE--eCCeEEEEeCCCCe
Q 044903 246 IDAVG--WKGKLCLVNVKGAEGAVYDVVA----NTWDDMR----E---GMVRG--W-RGPVAAM--DEEVLYGIDENSCT 307 (387)
Q Consensus 246 ~~~v~--~~g~lyv~gg~~~~i~~yD~~~----~~W~~~~----~---~~~~~--~-~~~~~~~--~~g~ly~~g~~~~~ 307 (387)
..|+. .+|++|++-| ...+.||..+ +.-..-+ . +++.. . .-.++.. .++++|++-+ ..
T Consensus 62 iDAa~~~~~g~~~fFkg--~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG--~~ 137 (225)
T 3oyo_A 62 IDCSFHTEASEAYVFSG--NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG--NK 137 (225)
T ss_dssp CSEEEECSTTEEEEEET--TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET--TE
T ss_pred EeEEEEcCCCeEEEEcC--CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC--Ce
Confidence 33444 4799999865 4678887632 2111101 1 11110 0 1123333 3689999964 57
Q ss_pred EEEEeCCCCceEE----cc-ccccc------cCceeEEE--eCCeEEEEecCCceEEEEEec
Q 044903 308 LSKYDEVMDDWKE----VV-KSDLL------KGARHAAA--GGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 308 v~~yd~~~~~W~~----v~-~~~~~------~~~~~~~~--~~~~l~v~gg~~~~i~v~d~~ 356 (387)
.++||..+++-.. +. ..|.. ..--+++. .++++|++ .|...+.||..
T Consensus 138 yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfF--kG~~ywr~d~~ 197 (225)
T 3oyo_A 138 YVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLF--KGQNYVRIDFT 197 (225)
T ss_dssp EEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEE--ETTEEEEEECC
T ss_pred EEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEE--ECCEEEEEeCC
Confidence 9999987765443 11 11222 12223444 47899999 46778888887
No 352
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=26.10 E-value=4e+02 Score=24.73 Aligned_cols=103 Identities=12% Similarity=0.056 Sum_probs=64.8
Q ss_pred ccceeEEEECCEEEEEeeeC-----C-eEEEEECC------CCceeeccccccCCCCCcEEEEeCCeEEEEeC-----CC
Q 044903 243 REAIDAVGWKGKLCLVNVKG-----A-EGAVYDVV------ANTWDDMREGMVRGWRGPVAAMDEEVLYGIDE-----NS 305 (387)
Q Consensus 243 ~~~~~~v~~~g~lyv~gg~~-----~-~i~~yD~~------~~~W~~~~~~~~~~~~~~~~~~~~g~ly~~g~-----~~ 305 (387)
.+.|+-+.+++.=|++|-+. . ....|-+. .-.=+.++......-..+++-..+|.||+..- ..
T Consensus 284 Te~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~~~ 363 (670)
T 3ju4_A 284 TEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRL 363 (670)
T ss_dssp SEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTTSC
T ss_pred eeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcCCCCC
Confidence 34588888888888887654 2 22334321 11223444333333235677788999999862 12
Q ss_pred C-eEEEEeCCCCceEEcccccc-ccCceeEEEeCCeEEEEec
Q 044903 306 C-TLSKYDEVMDDWKEVVKSDL-LKGARHAAAGGGRVCAVCE 345 (387)
Q Consensus 306 ~-~v~~yd~~~~~W~~v~~~~~-~~~~~~~~~~~~~l~v~gg 345 (387)
| .+.+-+.....|+.+.-+.. +....-.+..++.||+||.
T Consensus 364 GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 364 GSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp CCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred cceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 3 47777778889999875433 3345667889999999985
No 353
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=24.86 E-value=3.6e+02 Score=23.75 Aligned_cols=134 Identities=8% Similarity=0.009 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCCCCCCCCceEEEEeCCCCccccCeEEcCCCCCCcccccceeEEEEC------CEEEEEeeeC-----C
Q 044903 195 RGAVYVASGIGSQFSSDVAKSVEKWDLMNGEKNSRWEKTGELKDGRFSREAIDAVGWK------GKLCLVNVKG-----A 263 (387)
Q Consensus 195 ~~~iyv~GG~~~~~~~~~~~~v~vyd~~t~~~~~~W~~~~~~~~~~~~~~~~~~v~~~------g~lyv~gg~~-----~ 263 (387)
++++||. +....+.+++ +.+ .+.+..++...........++++ +.||+..... .
T Consensus 41 dG~l~V~---------e~~g~I~~i~--~g~----~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 41 DGGMLIA---------ERPGRIRLFR--EGR----LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp TSCEEEE---------ETTTEEEEEE--TTE----EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCeEEEE---------eCCCeEEEEE--CCC----ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Q ss_pred eEEEEECCCC---ceeecccccc-----CCCCCcEEEEeCCeEEEEeCCC-------------CeEEEEeCCC-------
Q 044903 264 EGAVYDVVAN---TWDDMREGMV-----RGWRGPVAAMDEEVLYGIDENS-------------CTLSKYDEVM------- 315 (387)
Q Consensus 264 ~i~~yD~~~~---~W~~~~~~~~-----~~~~~~~~~~~~g~ly~~g~~~-------------~~v~~yd~~~------- 315 (387)
.+..|+...+ ..+.+-..++ .......+.-.+|.||+..+.. ++|+++|++.
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Q ss_pred ------CceEEccccccccCceeEEEeCCeEEEE
Q 044903 316 ------DDWKEVVKSDLLKGARHAAAGGGRVCAV 343 (387)
Q Consensus 316 ------~~W~~v~~~~~~~~~~~~~~~~~~l~v~ 343 (387)
...+....--+.-...+.-.-+|.||+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEE
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEE
No 354
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=23.26 E-value=4e+02 Score=23.73 Aligned_cols=105 Identities=15% Similarity=0.097 Sum_probs=54.2
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeecc---ccccCCCCCcE-EEEe-----CCeEEEEe--CCCCeEEEEeCCC-----
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDMR---EGMVRGWRGPV-AAMD-----EEVLYGID--ENSCTLSKYDEVM----- 315 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~~---~~~~~~~~~~~-~~~~-----~g~ly~~g--~~~~~v~~yd~~~----- 315 (387)
+|.+||..-....|..++....+-+.+. .....+..+.. +++. ++.||+.- ...+.|.+|....
T Consensus 42 dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~ 121 (347)
T 3das_A 42 GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSG 121 (347)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTT
T ss_pred CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCccc
Confidence 5666665322346677776555444332 11122233333 4442 57899863 2345788887654
Q ss_pred Cc---eEEcc-ccccc--c-CceeEEEeCCeEEEEecC-------------CceEEEEEec
Q 044903 316 DD---WKEVV-KSDLL--K-GARHAAAGGGRVCAVCEN-------------GGGIVVVDVK 356 (387)
Q Consensus 316 ~~---W~~v~-~~~~~--~-~~~~~~~~~~~l~v~gg~-------------~~~i~v~d~~ 356 (387)
.. .+.+- ..|.. + ....++.-+|+|||..|. ...|+-+|+.
T Consensus 122 ~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 122 EQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred ccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 22 23322 23321 1 122344558899998652 2467777766
No 355
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=22.38 E-value=5.6e+02 Score=25.09 Aligned_cols=62 Identities=11% Similarity=-0.009 Sum_probs=34.3
Q ss_pred CCEEEEEeeeCCeEEEEECCCCceeec-cccccCCC-----CCcEEEEe--CCeEEEEeCCCCeEEEEeCCCCc
Q 044903 252 KGKLCLVNVKGAEGAVYDVVANTWDDM-REGMVRGW-----RGPVAAMD--EEVLYGIDENSCTLSKYDEVMDD 317 (387)
Q Consensus 252 ~g~lyv~gg~~~~i~~yD~~~~~W~~~-~~~~~~~~-----~~~~~~~~--~g~ly~~g~~~~~v~~yd~~~~~ 317 (387)
+|++|++-| ...+.||..+++=... +..+...| .-.++... +|++|++-+ ...++||..++.
T Consensus 548 ~gktYFFkG--~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFkG--~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 548 NKKTYIFAG--DKFWRYNEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFKG--AYYLKLENQSLK 617 (631)
T ss_dssp TCEEEEEET--TEEEEEETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEET--TEEECCBTTBTT
T ss_pred CCeEEEEEC--CEEEEEcCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEEC--CEEEEEeCccce
Confidence 689999865 4778999765421110 00011111 11233332 378999953 467888876553
No 356
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=21.79 E-value=5.9e+02 Score=25.21 Aligned_cols=148 Identities=11% Similarity=-0.004 Sum_probs=75.2
Q ss_pred CccEEEeCCC--CceeeCCCCCCCceeeeEEeeCCEEEEEecCCCCC--CCCCCceEEEEeCCC--------CccccCeE
Q 044903 164 TRPLIFDPIC--RTWTFGPELVTPRRWCAAGYSRGAVYVASGIGSQF--SSDVAKSVEKWDLMN--------GEKNSRWE 231 (387)
Q Consensus 164 ~~~~vydp~t--~~W~~l~~~~~~r~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~v~vyd~~t--------~~~~~~W~ 231 (387)
++++..|... .+|.++ .+| +........++++|+....+-.. .......+.+.|..+ .. |+
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~ 341 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMP--SDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTS----LK 341 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSC--TTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTT----CE
T ss_pred eeEEEEcCCCCCCcceEe-ecC--CcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccccc----ce
Confidence 3445555442 557766 222 22222456688998865432100 001233567777654 24 88
Q ss_pred E-cCCCCCCcccccceeEEEECCEEEEEeeeC--CeEEEEECCCCceeecc-ccccCCCCCcEEE---EeCCeEEEEeC-
Q 044903 232 K-TGELKDGRFSREAIDAVGWKGKLCLVNVKG--AEGAVYDVVANTWDDMR-EGMVRGWRGPVAA---MDEEVLYGIDE- 303 (387)
Q Consensus 232 ~-~~~~~~~~~~~~~~~~v~~~g~lyv~gg~~--~~i~~yD~~~~~W~~~~-~~~~~~~~~~~~~---~~~g~ly~~g~- 303 (387)
. +++-... ........++.+++..-.. ..+.++|+.++.|.... ..++... ..... ..++.+++...
T Consensus 342 ~~~~~~~~~----~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~-~~~~~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 342 ILFTPTANE----VFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQN-AIFGMSSYEEEEEALITIEN 416 (711)
T ss_dssp EEECCCTTE----EEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTT-CEEEEECCTTCSCEEEEEEC
T ss_pred EEECCCCCC----eEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCe-EEEEEeecCcCCEEEEEEec
Confidence 7 4322211 1123345567777654433 56888998888885433 2223210 11111 12344554432
Q ss_pred --CCCeEEEEeCCCCceEEcccc
Q 044903 304 --NSCTLSKYDEVMDDWKEVVKS 324 (387)
Q Consensus 304 --~~~~v~~yd~~~~~W~~v~~~ 324 (387)
....++.||.+ .+++.+...
T Consensus 417 ~~~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 417 SIVPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp SSSCCEEEEECTT-SCEEEEECC
T ss_pred CCCCCEEEEEeCC-CcEEEEecC
Confidence 34679999988 777766543
No 357
>2dae_A KIAA0733 protein; mitogen-activated protein kinase kinase kinase 7 interacting protein 2, MAP3K7IP2, CUE domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.06 E-value=45 Score=22.16 Aligned_cols=17 Identities=18% Similarity=0.630 Sum_probs=14.5
Q ss_pred CCCChHHHHHHHhhhcC
Q 044903 43 LPGLPDHIAHLCLSHVH 59 (387)
Q Consensus 43 ~~~LP~dl~~~iL~rLP 59 (387)
+|.+|++|+.+|+..--
T Consensus 21 FPEvPd~VVsqc~~qN~ 37 (75)
T 2dae_A 21 FPEVPEVVVSRCMLQNN 37 (75)
T ss_dssp SSSSCHHHHHHHHTTTT
T ss_pred cccCcHHHHHHHHHHhc
Confidence 67899999999987655
No 358
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=20.47 E-value=3.2e+02 Score=22.54 Aligned_cols=63 Identities=11% Similarity=0.113 Sum_probs=36.7
Q ss_pred EEEE-eCCeEEEEeCCCCeEEEEeCCCCce--EEcccc-ccc-cCceeEEEeCCeEEEEecCCceEEEEEec
Q 044903 290 VAAM-DEEVLYGIDENSCTLSKYDEVMDDW--KEVVKS-DLL-KGARHAAAGGGRVCAVCENGGGIVVVDVK 356 (387)
Q Consensus 290 ~~~~-~~g~ly~~g~~~~~v~~yd~~~~~W--~~v~~~-~~~-~~~~~~~~~~~~l~v~gg~~~~i~v~d~~ 356 (387)
+++. .+|++|++- ....++++...+.+ ..|... |.+ ..-=++...+|++|+| .|...++|+..
T Consensus 22 Ai~~~~~g~~yfFk--g~~~Wr~~~~~~~~~p~~Is~~wpgLP~~IDAA~~~~~~~yfF--kG~~yw~~~~~ 89 (219)
T 1hxn_A 22 AMVSDNHGATYVFS--GSHYWRLDTNRDGWHSWPIAHQWPQGPSTVDAAFSWEDKLYLI--QDTKVYVFLTK 89 (219)
T ss_dssp EEEECTTSCEEEEE--TTEEEESSSSSCTTCCEEGGGTCTTSCSSCSEEEEETTEEEEE--ETTEEEEEECS
T ss_pred EEEECCCCcEEEEe--CCEEEEEcCCCCCCCceEhhhhccCCCCCccEEEEECCcEEEe--cCCEEEEEeCC
Confidence 4444 578999995 45778887654322 112111 111 1112344568999999 56788999865
Done!