Query 044904
Match_columns 155
No_of_seqs 135 out of 1089
Neff 4.6
Searched_HMMs 29240
Date Mon Mar 25 13:47:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044904.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044904hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1p3h_A 10 kDa chaperonin; beta 100.0 1.6E-38 5.6E-43 234.1 11.7 95 61-155 3-99 (99)
2 3nx6_A 10KDA chaperonin; bacte 100.0 9.4E-39 3.2E-43 233.9 10.3 94 61-154 1-95 (95)
3 1we3_O CPN10(groes); chaperoni 100.0 1.6E-38 5.6E-43 234.6 9.0 94 61-154 6-100 (100)
4 1pcq_O Groes protein; chaperon 100.0 3.8E-38 1.3E-42 231.4 10.9 94 61-154 1-96 (97)
5 1g31_A GP31; chaperone, CO-cha 99.9 1.1E-27 3.7E-32 179.7 1.1 90 58-154 4-111 (111)
6 3uko_A Alcohol dehydrogenase c 89.8 0.49 1.7E-05 39.2 5.5 25 94-127 69-93 (378)
7 1gu7_A Enoyl-[acyl-carrier-pro 88.3 0.7 2.4E-05 37.8 5.4 41 95-150 80-122 (364)
8 3goh_A Alcohol dehydrogenase, 87.9 0.69 2.4E-05 37.1 5.0 44 94-151 65-111 (315)
9 1zsy_A Mitochondrial 2-enoyl t 87.6 0.81 2.8E-05 37.5 5.3 43 94-150 91-134 (357)
10 3qwb_A Probable quinone oxidor 87.5 0.76 2.6E-05 37.2 5.1 41 94-149 70-111 (334)
11 3m6i_A L-arabinitol 4-dehydrog 87.3 0.74 2.5E-05 37.7 5.0 25 94-127 79-103 (363)
12 1wly_A CAAR, 2-haloacrylate re 87.1 0.69 2.3E-05 37.4 4.6 43 94-150 67-110 (333)
13 4a0s_A Octenoyl-COA reductase/ 86.7 0.77 2.6E-05 38.9 4.9 24 95-127 117-140 (447)
14 3jyn_A Quinone oxidoreductase; 86.5 0.86 2.9E-05 36.8 4.9 43 94-150 64-107 (325)
15 4dup_A Quinone oxidoreductase; 85.9 0.95 3.3E-05 37.1 4.9 44 94-151 92-135 (353)
16 4a27_A Synaptic vesicle membra 85.4 0.88 3E-05 37.2 4.4 43 94-150 67-109 (349)
17 3gms_A Putative NADPH:quinone 85.3 1 3.5E-05 36.6 4.7 44 94-151 69-112 (340)
18 2eih_A Alcohol dehydrogenase; 85.0 1 3.5E-05 36.6 4.6 25 94-127 64-88 (343)
19 2j8z_A Quinone oxidoreductase; 84.6 1.2 4.1E-05 36.5 4.9 43 94-150 86-129 (354)
20 2vn8_A Reticulon-4-interacting 84.5 1.2 4.1E-05 36.8 4.9 43 94-150 101-146 (375)
21 2d8a_A PH0655, probable L-thre 84.4 1.2 4.3E-05 36.2 4.9 25 94-127 68-92 (348)
22 1qor_A Quinone oxidoreductase; 84.3 1.4 4.6E-05 35.5 5.0 43 94-150 64-107 (327)
23 1yb5_A Quinone oxidoreductase; 83.9 1.3 4.4E-05 36.5 4.8 72 65-150 55-137 (351)
24 3gaz_A Alcohol dehydrogenase s 83.8 0.9 3.1E-05 37.1 3.8 46 94-150 70-117 (343)
25 3fbg_A Putative arginate lyase 83.7 1.6 5.4E-05 35.6 5.2 43 94-150 66-111 (346)
26 4dvj_A Putative zinc-dependent 83.3 1.5 5.1E-05 36.2 5.0 74 64-151 49-134 (363)
27 3tqh_A Quinone oxidoreductase; 83.1 1.4 4.9E-05 35.4 4.7 44 94-151 74-121 (321)
28 4ej6_A Putative zinc-binding d 82.7 1.7 5.7E-05 36.1 5.1 53 65-127 45-106 (370)
29 3pi7_A NADH oxidoreductase; gr 82.7 1 3.5E-05 36.7 3.7 73 64-150 46-132 (349)
30 3ip1_A Alcohol dehydrogenase, 82.3 1.4 4.9E-05 36.8 4.6 30 94-127 98-128 (404)
31 2dq4_A L-threonine 3-dehydroge 81.8 0.85 2.9E-05 37.1 2.9 25 94-127 64-88 (343)
32 4eez_A Alcohol dehydrogenase 1 81.7 0.89 3E-05 36.7 2.9 25 94-127 61-85 (348)
33 3iup_A Putative NADPH:quinone 81.6 1.4 4.8E-05 36.6 4.2 42 94-150 97-139 (379)
34 3two_A Mannitol dehydrogenase; 81.6 0.89 3E-05 37.1 2.9 25 94-127 65-89 (348)
35 1f8f_A Benzyl alcohol dehydrog 81.4 0.91 3.1E-05 37.3 2.9 25 94-127 66-90 (371)
36 2c0c_A Zinc binding alcohol de 81.2 1.9 6.4E-05 35.6 4.8 43 94-150 90-132 (362)
37 1cdo_A Alcohol dehydrogenase; 80.8 0.97 3.3E-05 37.2 2.9 25 94-127 69-93 (374)
38 2cf5_A Atccad5, CAD, cinnamyl 80.7 0.99 3.4E-05 37.1 2.9 24 94-126 70-93 (357)
39 1p0f_A NADP-dependent alcohol 80.6 1 3.4E-05 37.1 2.9 54 65-127 32-93 (373)
40 1yqd_A Sinapyl alcohol dehydro 80.6 1 3.4E-05 37.3 2.9 24 94-126 77-100 (366)
41 1pl8_A Human sorbitol dehydrog 80.5 1 3.5E-05 36.9 2.9 25 94-127 70-94 (356)
42 3jv7_A ADH-A; dehydrogenase, n 80.5 1 3.5E-05 36.6 2.9 25 94-127 63-87 (345)
43 2fzw_A Alcohol dehydrogenase c 80.4 1 3.5E-05 37.0 2.9 25 94-127 67-91 (373)
44 1e3j_A NADP(H)-dependent ketos 80.2 1.1 3.6E-05 36.7 2.9 25 94-127 67-91 (352)
45 2jhf_A Alcohol dehydrogenase E 80.1 1.1 3.6E-05 37.0 2.9 54 65-127 31-92 (374)
46 1e3i_A Alcohol dehydrogenase, 80.0 1.1 3.6E-05 37.0 2.9 54 65-127 31-92 (376)
47 3s2e_A Zinc-containing alcohol 79.8 1.1 3.8E-05 36.3 2.9 24 94-126 64-87 (340)
48 2hcy_A Alcohol dehydrogenase 1 79.7 1.1 3.9E-05 36.4 2.9 25 94-127 67-91 (347)
49 1kol_A Formaldehyde dehydrogen 79.3 1.1 3.7E-05 37.2 2.8 24 94-126 68-91 (398)
50 3uog_A Alcohol dehydrogenase; 79.3 1.2 4E-05 36.7 2.9 55 64-127 50-114 (363)
51 3fpc_A NADP-dependent alcohol 79.2 1.3 4.5E-05 36.1 3.2 25 94-127 60-84 (352)
52 2dph_A Formaldehyde dismutase; 79.1 1.1 3.8E-05 37.3 2.8 25 94-127 67-91 (398)
53 4eye_A Probable oxidoreductase 79.1 2 6.7E-05 35.1 4.2 71 65-150 46-126 (342)
54 1rjw_A ADH-HT, alcohol dehydro 79.0 1.2 4.2E-05 36.2 2.9 25 94-127 62-86 (339)
55 3krt_A Crotonyl COA reductase; 78.7 1.2 4.1E-05 38.0 2.9 24 95-127 125-148 (456)
56 1uuf_A YAHK, zinc-type alcohol 78.6 1.2 4E-05 37.0 2.8 54 65-127 45-107 (369)
57 1jvb_A NAD(H)-dependent alcoho 78.5 1.2 4.2E-05 36.2 2.8 24 94-126 69-92 (347)
58 1h2b_A Alcohol dehydrogenase; 78.1 1.3 4.3E-05 36.5 2.8 24 94-126 80-103 (359)
59 3gqv_A Enoyl reductase; medium 77.4 2.6 8.9E-05 34.8 4.5 77 65-150 34-119 (371)
60 2h6e_A ADH-4, D-arabinose 1-de 76.9 1.5 5E-05 35.7 2.8 24 94-127 66-89 (344)
61 2b5w_A Glucose dehydrogenase; 76.3 2.5 8.4E-05 34.6 4.1 23 94-127 64-86 (357)
62 3slk_A Polyketide synthase ext 74.4 3.5 0.00012 38.3 5.0 70 65-150 236-312 (795)
63 3mlq_E Transcription-repair co 71.4 3 0.0001 27.9 2.9 31 117-147 2-40 (71)
64 4a2c_A Galactitol-1-phosphate 71.4 2.6 8.7E-05 33.9 2.9 26 94-128 60-85 (346)
65 1piw_A Hypothetical zinc-type 70.0 3.1 0.00011 34.1 3.2 25 94-126 69-93 (360)
66 3nx4_A Putative oxidoreductase 63.5 4.3 0.00015 32.3 2.8 46 94-150 64-110 (324)
67 1vj0_A Alcohol dehydrogenase, 53.7 8.4 0.00029 31.8 3.0 29 94-127 78-107 (380)
68 3v2d_V 50S ribosomal protein L 47.9 46 0.0016 23.7 5.8 30 116-148 12-44 (101)
69 3pqh_A Gene product 138; beta- 46.1 38 0.0013 25.4 5.2 35 94-136 18-52 (127)
70 1at0_A 17-hedgehog; developmen 46.0 30 0.001 25.3 4.7 26 107-132 9-35 (145)
71 4b7c_A Probable oxidoreductase 44.9 25 0.00085 28.0 4.4 38 95-151 78-115 (336)
72 1xa0_A Putative NADPH dependen 40.0 16 0.00055 29.1 2.5 46 94-150 67-113 (328)
73 3es4_A Uncharacterized protein 39.2 32 0.0011 24.9 3.9 29 103-133 70-100 (116)
74 2ozi_A Hypothetical protein RP 37.8 44 0.0015 22.7 4.3 38 98-135 40-80 (98)
75 1b12_A Signal peptidase I; ser 36.3 73 0.0025 25.0 5.9 72 58-138 15-93 (248)
76 4e2q_A Ureidoglycine aminohydr 36.2 58 0.002 26.7 5.4 50 95-146 208-260 (266)
77 2j3h_A NADP-dependent oxidored 35.1 18 0.00062 28.9 2.1 23 95-126 78-102 (345)
78 1sq4_A GLXB, glyoxylate-induce 33.6 59 0.002 26.1 5.0 51 94-146 212-265 (278)
79 1sfn_A Conserved hypothetical 31.9 53 0.0018 25.6 4.3 50 95-146 187-239 (246)
80 2lqk_A Transcriptional regulat 36.3 11 0.00037 25.0 0.0 31 117-147 6-44 (70)
81 1tt7_A YHFP; alcohol dehydroge 30.0 27 0.00093 27.7 2.3 44 94-150 68-114 (330)
82 3bu7_A Gentisate 1,2-dioxygena 29.4 62 0.0021 28.0 4.7 44 103-148 323-368 (394)
83 2z1c_A Hydrogenase expression/ 29.2 30 0.001 23.5 2.1 12 117-128 35-46 (75)
84 3r8s_R 50S ribosomal protein L 28.4 1.5E+02 0.0051 21.0 5.8 21 117-137 13-36 (103)
85 1v3u_A Leukotriene B4 12- hydr 25.7 69 0.0024 25.3 4.1 36 95-149 71-106 (333)
86 2hc8_A PACS, cation-transporti 25.4 1.2E+02 0.0043 21.1 5.0 37 96-137 47-86 (113)
87 1bkb_A Translation initiation 24.9 2E+02 0.0068 20.9 7.3 40 109-148 53-95 (136)
88 3t1e_A Hemagglutinin-neuramini 24.6 68 0.0023 29.2 4.2 87 29-132 200-286 (537)
89 2k1g_A Lipoprotein SPR; soluti 23.1 12 0.00041 27.7 -0.9 34 82-128 44-78 (135)
90 2cdc_A Glucose dehydrogenase g 23.1 38 0.0013 27.5 2.0 22 94-127 67-88 (366)
91 3bu7_A Gentisate 1,2-dioxygena 22.5 95 0.0032 26.8 4.5 41 102-144 151-194 (394)
92 1iz6_A Initiation factor 5A; S 21.9 1.5E+02 0.0052 21.7 5.0 40 109-148 51-93 (138)
93 1wv3_A Similar to DNA segregat 21.4 1.4E+02 0.0049 23.5 5.1 47 99-148 127-178 (238)
No 1
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=100.00 E-value=1.6e-38 Score=234.12 Aligned_cols=95 Identities=31% Similarity=0.664 Sum_probs=91.8
Q ss_pred ccceecCCeEEEEecCCCCcccceEEecCC-CCCceeeEEEEEcCCccCCCC-ceeeeeeecCCEEEecCCCceEEEECC
Q 044904 61 KRLIPTLNRVLVEKIVPPSKTNAGILLPEK-SSKLNSGKVIAVGPGARDKEG-NTIPVAFKEGDTVLLPNYGGDHVKLGE 138 (155)
Q Consensus 61 ~~i~PLgDRVLVk~~e~e~kT~gGIiLP~s-a~k~~~G~VVAVG~G~~~~~G-~~~P~~VKvGD~Vlf~~y~G~evk~dg 138 (155)
++|+||+|||||++.++|++|+|||+||++ ++|+++|+|||||+|+++++| +++|++||+||+|+|++|+|++|++||
T Consensus 3 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dg 82 (99)
T 1p3h_A 3 VNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNG 82 (99)
T ss_dssp CEEEECTTEEEEEECCCCCBCTTSCBCCCSSCCSEEEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETT
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECC
Confidence 489999999999999999999999999999 579999999999999999999 999999999999999999999999999
Q ss_pred EEEEEEecCceEEEecC
Q 044904 139 KDYHLYRDEEILGTLHD 155 (155)
Q Consensus 139 ~ey~ivre~DILAvi~~ 155 (155)
++|+++|++||||++++
T Consensus 83 eey~i~re~DIlavi~~ 99 (99)
T 1p3h_A 83 EEYLILSARDVLAVVSK 99 (99)
T ss_dssp EEEEEEEGGGEEEEEEC
T ss_pred EEEEEEEhHhEEEEeeC
Confidence 99999999999999975
No 2
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=100.00 E-value=9.4e-39 Score=233.90 Aligned_cols=94 Identities=28% Similarity=0.521 Sum_probs=73.7
Q ss_pred ccceecCCeEEEEecCCCCcccceEEecCC-CCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCE
Q 044904 61 KRLIPTLNRVLVEKIVPPSKTNAGILLPEK-SSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEK 139 (155)
Q Consensus 61 ~~i~PLgDRVLVk~~e~e~kT~gGIiLP~s-a~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ 139 (155)
++|+||+|||||++.++|++|+|||+||++ ++|+++|+|||||+|+.+++|+++|++||+||+|+|++|+|++|++||+
T Consensus 1 m~i~PL~DRVlVk~~e~e~kT~gGI~LP~~a~eK~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ 80 (95)
T 3nx6_A 1 MSIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGV 80 (95)
T ss_dssp -CCCCCTTEEEEEEC-------------------CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTE
T ss_pred CCeEEcCCEEEEEEccccccccceEEeCccccCCccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCE
Confidence 379999999999999999999999999999 4799999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCceEEEec
Q 044904 140 DYHLYRDEEILGTLH 154 (155)
Q Consensus 140 ey~ivre~DILAvi~ 154 (155)
+|+++|++||||+++
T Consensus 81 ey~i~re~DILavie 95 (95)
T 3nx6_A 81 EYKVLREDDILAVIG 95 (95)
T ss_dssp EEEEEEGGGEEEECC
T ss_pred EEEEEEHHHEEEEeC
Confidence 999999999999985
No 3
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=100.00 E-value=1.6e-38 Score=234.55 Aligned_cols=94 Identities=35% Similarity=0.689 Sum_probs=91.0
Q ss_pred ccceecCCeEEEEecCCCCcccceEEecCCC-CCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCE
Q 044904 61 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKS-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEK 139 (155)
Q Consensus 61 ~~i~PLgDRVLVk~~e~e~kT~gGIiLP~sa-~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ 139 (155)
++|+||+|||||++.++|++|+|||+||+++ +|+++|+|||||+|+.+++|+++|++||+||+|+|++|+|++|++||+
T Consensus 6 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dge 85 (100)
T 1we3_O 6 TVIKPLGDRVVVKRIEEEPKTKGGIVLPDTAKEKPQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGE 85 (100)
T ss_dssp CCEEECTTCEEEEECCCCSSCTTCCCCCTTTSCCCSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSC
T ss_pred ceeEEeCCEEEEEEccccccccceEEeCcccccCCcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCE
Confidence 5699999999999999999999999999994 799999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCceEEEec
Q 044904 140 DYHLYRDEEILGTLH 154 (155)
Q Consensus 140 ey~ivre~DILAvi~ 154 (155)
+|+++|++||||+++
T Consensus 86 eyli~re~DIlavi~ 100 (100)
T 1we3_O 86 EYVILSERDLLAVLQ 100 (100)
T ss_dssp EEEEECTTTEEEEEC
T ss_pred EEEEEEhHHEEEEeC
Confidence 999999999999985
No 4
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=100.00 E-value=3.8e-38 Score=231.41 Aligned_cols=94 Identities=28% Similarity=0.506 Sum_probs=90.9
Q ss_pred ccceecCCeEEEEecCCCCcccceEEecCCC-CCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC-CCceEEEECC
Q 044904 61 KRLIPTLNRVLVEKIVPPSKTNAGILLPEKS-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN-YGGDHVKLGE 138 (155)
Q Consensus 61 ~~i~PLgDRVLVk~~e~e~kT~gGIiLP~sa-~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~-y~G~evk~dg 138 (155)
++|+||+|||||++.++|++|+|||+||+++ +|+++|+|||||+|+.+++|+++|++||+||+|+|++ |+|++|++||
T Consensus 1 ~~i~PL~DRVlVk~~e~e~kT~gGI~LP~sakeKp~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dg 80 (97)
T 1pcq_O 1 MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDN 80 (97)
T ss_dssp CEEEECSSEEEEEECCTTCTTTTSSCCCCCCSCCCCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETT
T ss_pred CCceEcCCEEEEEEccccccccceEEeCcccccCCcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECC
Confidence 3799999999999999999999999999994 7999999999999999999999999999999999999 9999999999
Q ss_pred EEEEEEecCceEEEec
Q 044904 139 KDYHLYRDEEILGTLH 154 (155)
Q Consensus 139 ~ey~ivre~DILAvi~ 154 (155)
++|+++|++||||+++
T Consensus 81 eey~i~re~DIlavv~ 96 (97)
T 1pcq_O 81 EEVLIMSESDILAIVE 96 (97)
T ss_dssp EEEEEEEGGGEEEEEE
T ss_pred EEEEEEEhHHEEEEec
Confidence 9999999999999986
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.93 E-value=1.1e-27 Score=179.69 Aligned_cols=90 Identities=14% Similarity=0.092 Sum_probs=79.9
Q ss_pred hhhccceecCCeEEEEecC----CCCcccceEEecCC-C-CCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC--C
Q 044904 58 AMAKRLIPTLNRVLVEKIV----PPSKTNAGILLPEK-S-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN--Y 129 (155)
Q Consensus 58 ~m~~~i~PLgDRVLVk~~e----~e~kT~gGIiLP~s-a-~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~--y 129 (155)
+|.++|+||+|||||++.+ +|++|+|||+||++ + +||+.|+|||||+|+ .++.||+||+|+|++ |
T Consensus 4 mm~m~ikPL~drVlvk~~~~~~~~E~kT~sGIilp~~aakekp~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~ 76 (111)
T 1g31_A 4 VQQLPIRAVGEYVILVSEPAQAGDEEVTESGLIIGKRVQGEVPELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQI 76 (111)
T ss_dssp -CCCSCEECTTEEEEEECSSCGGGCTTSCTTCCCCHHHHHHSEEEEEEEEECTTS-------CTTSCCTTCEEEEEGGGC
T ss_pred hhccCceecCCEEEEEEcccCCCcceEcCCcEEeCCCccccCCceEEEEEECCCC-------ccccccCCCEEEECCCcc
Confidence 4667999999999999988 78999999999999 4 689999999999997 245799999999954 7
Q ss_pred C--------ceEEEECC--EEEEEEecCceEEEec
Q 044904 130 G--------GDHVKLGE--KDYHLYRDEEILGTLH 154 (155)
Q Consensus 130 ~--------G~evk~dg--~ey~ivre~DILAvi~ 154 (155)
+ |.+++.++ ++|++++++||||+++
T Consensus 77 ~nvp~p~vi~g~i~~~~~~e~y~i~~~~dIlavy~ 111 (111)
T 1g31_A 77 RNVPHPFVALGLKQPKEIKQKFVTCHYKAIPCLYK 111 (111)
T ss_dssp EEECCHHHHTTSSCGGGCCCCEEEEEGGGCCEECC
T ss_pred ccCCCcceeeeEEccCCcccEEEEEehHHeEEEeC
Confidence 7 78999988 9999999999999874
No 6
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=89.76 E-value=0.49 Score=39.15 Aligned_cols=25 Identities=32% Similarity=0.450 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (378)
T 3uko_A 69 EAAGIVESVGEGVT---------EVQAGDHVIPC 93 (378)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------cCCCCCEEEEe
Confidence 46899999999863 48999999854
No 7
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=88.31 E-value=0.7 Score=37.76 Aligned_cols=41 Identities=24% Similarity=0.406 Sum_probs=29.3
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEecC--CCceEEEECCEEEEEEecCceE
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN--YGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~--y~G~evk~dg~ey~ivre~DIL 150 (155)
..|+|++||++.. .+++||+|.... +++ =.+|+++.++.+.
T Consensus 80 ~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~------~aey~~v~~~~~~ 122 (364)
T 1gu7_A 80 GLFEVIKVGSNVS---------SLEAGDWVIPSHVNFGT------WRTHALGNDDDFI 122 (364)
T ss_dssp CEEEEEEECTTCC---------SCCTTCEEEESSSCCCC------SBSEEEEEGGGEE
T ss_pred eEEEEEEeCCCCC---------cCCCCCEEEecCCCCCc------chheEecCHHHeE
Confidence 5799999999763 589999998653 222 2567777766554
No 8
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=87.86 E-value=0.69 Score=37.12 Aligned_cols=44 Identities=14% Similarity=0.270 Sum_probs=31.4
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCC---CceEEEECCEEEEEEecCceEE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNY---GGDHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y---~G~evk~dg~ey~ivre~DILA 151 (155)
-..|+|+++|++.. .+++||+|..... .| .=.+|+++.++.+..
T Consensus 65 e~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~~~G-----~~aey~~v~~~~~~~ 111 (315)
T 3goh_A 65 DGAGVIVKVGAKVD---------SKMLGRRVAYHTSLKRHG-----SFAEFTVLNTDRVMT 111 (315)
T ss_dssp EEEEEEEEECTTSC---------GGGTTCEEEEECCTTSCC-----SSBSEEEEETTSEEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEeCCCCCCc-----ccccEEEEcHHHhcc
Confidence 47899999999863 5899999997531 11 125788888776543
No 9
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=87.56 E-value=0.81 Score=37.54 Aligned_cols=43 Identities=28% Similarity=0.495 Sum_probs=30.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCC-ceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYG-GDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~-G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|...... |. =.+|+++.++.+.
T Consensus 91 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~ 134 (357)
T 1zsy_A 91 EGVAQVVAVGSNVT---------GLKPGDWVIPANAGLGT-----WRTEAVFSEEALI 134 (357)
T ss_dssp CCEEEEEEECTTCC---------SCCTTCEEEESSSCSCC-----SBSEEEEEGGGEE
T ss_pred eEEEEEEEeCCCCC---------CCCCCCEEEEcCCCCcc-----ceeEEecCHHHcE
Confidence 36899999999863 48999999875421 10 1577777776554
No 10
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=87.49 E-value=0.76 Score=37.18 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=29.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEe-cCce
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYR-DEEI 149 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivr-e~DI 149 (155)
-..|+|++||++.. .+++||+|.+...++ =.+|+++. ++.+
T Consensus 70 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~G~------~aey~~v~~~~~~ 111 (334)
T 3qwb_A 70 EASGTVVAKGKGVT---------NFEVGDQVAYISNST------FAQYSKISSQGPV 111 (334)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSC------SBSEEEEETTSSE
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEeeCCc------ceEEEEecCcceE
Confidence 36899999999763 589999999754322 24677777 4443
No 11
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.32 E-value=0.74 Score=37.68 Aligned_cols=25 Identities=40% Similarity=0.648 Sum_probs=21.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 79 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 103 (363)
T 3m6i_A 79 ESAGEVIAVHPSVK---------SIKVGDRVAIE 103 (363)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 36899999999863 58999999864
No 12
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=87.15 E-value=0.69 Score=37.42 Aligned_cols=43 Identities=28% Similarity=0.359 Sum_probs=29.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCC-CceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNY-GGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y-~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|+++|++.. .+++||+|.+... .|. =.+|+++.++.+.
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~ 110 (333)
T 1wly_A 67 EAAAVVEEVGPGVT---------DFTVGERVCTCLPPLGA-----YSQERLYPAEKLI 110 (333)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECSSSCCC-----SBSEEEEEGGGCE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCCc-----ceeEEEecHHHcE
Confidence 46899999999863 5899999976432 110 2577777766553
No 13
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=86.71 E-value=0.77 Score=38.86 Aligned_cols=24 Identities=42% Similarity=0.697 Sum_probs=20.6
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
..|+|++||++.. .+++||+|...
T Consensus 117 ~~G~V~~vG~~V~---------~~~vGDrV~~~ 140 (447)
T 4a0s_A 117 CSGVVVRTGIGVR---------RWKPGDHVIVH 140 (447)
T ss_dssp EEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eeEEEEEECCCCC---------CCCCCCEEEEe
Confidence 6799999999863 58999999974
No 14
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.49 E-value=0.86 Score=36.80 Aligned_cols=43 Identities=28% Similarity=0.373 Sum_probs=30.8
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC-CCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN-YGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~-y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|.+.. ..|. =.+|+.+.++.+.
T Consensus 64 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~ 107 (325)
T 3jyn_A 64 EGAGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA-----YSEVHVLPEANLV 107 (325)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESSSSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEEecCCCcc-----ccceEEecHHHeE
Confidence 36899999999863 589999999754 1221 2567777777654
No 15
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=85.92 E-value=0.95 Score=37.13 Aligned_cols=44 Identities=34% Similarity=0.554 Sum_probs=31.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceEE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DILA 151 (155)
-..|+|++||++.. .+++||+|..-...| .=.+|+++.++.+..
T Consensus 92 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G-----~~aey~~v~~~~~~~ 135 (353)
T 4dup_A 92 ELSGEIVGVGPGVS---------GYAVGDKVCGLANGG-----AYAEYCLLPAGQILP 135 (353)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSC-----CSBSEEEEEGGGEEE
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEecCCC-----ceeeEEEEcHHHcEe
Confidence 36899999999863 589999998543222 125777777776543
No 16
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=85.41 E-value=0.88 Score=37.20 Aligned_cols=43 Identities=21% Similarity=0.122 Sum_probs=30.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|..-...|. =.+|+++.++.+.
T Consensus 67 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~ 109 (349)
T 4a27_A 67 ECSGIVEALGDSVK---------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY 109 (349)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence 46899999999863 4899999985432221 1567777776554
No 17
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=85.29 E-value=1 Score=36.61 Aligned_cols=44 Identities=20% Similarity=0.095 Sum_probs=30.8
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceEE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DILA 151 (155)
-..|+|++||++.. .+++||+|..-...|. =.+|+++.++.+..
T Consensus 69 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~~ 112 (340)
T 3gms_A 69 EGVGIVENVGAFVS---------RELIGKRVLPLRGEGT-----WQEYVKTSADFVVP 112 (340)
T ss_dssp CCEEEEEEECTTSC---------GGGTTCEEEECSSSCS-----SBSEEEEEGGGEEE
T ss_pred ceEEEEEEeCCCCC---------CCCCCCEEEecCCCcc-----ceeEEEcCHHHeEE
Confidence 36899999999863 5899999985322221 15788887776543
No 18
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=84.96 E-value=1 Score=36.62 Aligned_cols=25 Identities=48% Similarity=0.735 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|.+.
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2eih_A 64 DGSGVVDAVGPGVE---------GFAPGDEVVIN 88 (343)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence 36799999999863 58999999964
No 19
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=84.55 E-value=1.2 Score=36.53 Aligned_cols=43 Identities=30% Similarity=0.498 Sum_probs=30.0
Q ss_pred ceeeEEEEEcCCc-cCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGA-RDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~-~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++. . .+++||+|......|. =.+|+++.++.+.
T Consensus 86 E~~G~V~~vG~~v~~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 129 (354)
T 2j8z_A 86 EASGHVAELGPGCQG---------HWKIGDTAMALLPGGG-----QAQYVTVPEGLLM 129 (354)
T ss_dssp EEEEEEEEECSCC-----------CCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCcCC---------CCCCCCEEEEecCCCc-----ceeEEEeCHHHcE
Confidence 4679999999975 2 5899999986433221 2577777776554
No 20
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.46 E-value=1.2 Score=36.76 Aligned_cols=43 Identities=26% Similarity=0.334 Sum_probs=30.4
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCC---CceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNY---GGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y---~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|..... .| .=.+|+++.++.+.
T Consensus 101 E~~G~V~~vG~~V~---------~~~vGDrV~~~~~~~~~G-----~~aey~~v~~~~~~ 146 (375)
T 2vn8_A 101 DVSGVVMECGLDVK---------YFKPGDEVWAAVPPWKQG-----TLSEFVVVSGNEVS 146 (375)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCTTSCC-----SSBSEEEEEGGGEE
T ss_pred eeeEEEEEeCCCCC---------CCCCCCEEEEecCCCCCc-----cceeEEEEcHHHee
Confidence 47899999999863 5899999987431 11 02577877776654
No 21
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=84.42 E-value=1.2 Score=36.18 Aligned_cols=25 Identities=32% Similarity=0.635 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (348)
T 2d8a_A 68 EVAGEVVEIGPGVE---------GIEVGDYVSVE 92 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEc
Confidence 36799999999863 58999999875
No 22
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=84.26 E-value=1.4 Score=35.48 Aligned_cols=43 Identities=26% Similarity=0.330 Sum_probs=29.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec-CCCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP-NYGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~-~y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|.+. ...|. =.+|+++.++.+.
T Consensus 64 E~~G~V~~vG~~v~---------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~~ 107 (327)
T 1qor_A 64 EAAGIVSKVGSGVK---------HIKAGDRVVYAQSALGA-----YSSVHNIIADKAA 107 (327)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGEE
T ss_pred eeEEEEEEECCCCC---------CCCCCCEEEECCCCCce-----eeeEEEecHHHcE
Confidence 47899999999863 58999999654 11121 2578877776654
No 23
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=83.90 E-value=1.3 Score=36.49 Aligned_cols=72 Identities=29% Similarity=0.425 Sum_probs=42.5
Q ss_pred ecCCeEEEEecCCC-----CcccceEE-----ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCC-CceE
Q 044904 65 PTLNRVLVEKIVPP-----SKTNAGIL-----LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNY-GGDH 133 (155)
Q Consensus 65 PLgDRVLVk~~e~e-----~kT~gGIi-----LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y-~G~e 133 (155)
|--|-||||....- -....|-+ +|-.-.--..|+|++||++.. .+++||+|..... .|.
T Consensus 55 ~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~- 124 (351)
T 1yb5_A 55 PKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS---------AFKKGDRVFTSSTISGG- 124 (351)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCT---------TCCTTCEEEESCCSSCS-
T ss_pred CCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCCC---------CCCCCCEEEEeCCCCCc-
Confidence 44688999876421 01112221 121112347899999999863 5899999987542 221
Q ss_pred EEECCEEEEEEecCceE
Q 044904 134 VKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 134 vk~dg~ey~ivre~DIL 150 (155)
=.+|+++.++.+.
T Consensus 125 ----~aey~~v~~~~~~ 137 (351)
T 1yb5_A 125 ----YAEYALAADHTVY 137 (351)
T ss_dssp ----SBSEEEEEGGGEE
T ss_pred ----ceeEEEECHHHeE
Confidence 2577777766554
No 24
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=83.79 E-value=0.9 Score=37.13 Aligned_cols=46 Identities=26% Similarity=0.355 Sum_probs=30.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEEC--CEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLG--EKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~d--g~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|..-..+... .+ =.+|+++.++.+.
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~~~~g~~~--~~G~~aey~~v~~~~~~ 117 (343)
T 3gaz_A 70 DLAGTVVAVGPEVD---------SFRVGDAVFGLTGGVGG--LQGTHAQFAAVDARLLA 117 (343)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECCSSTT--CCCSSBSEEEEEGGGEE
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEEeCCCCC--CCcceeeEEEecHHHee
Confidence 46899999999863 58999999864311000 11 2578888777654
No 25
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=83.73 E-value=1.6 Score=35.63 Aligned_cols=43 Identities=26% Similarity=0.435 Sum_probs=30.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCC---CceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNY---GGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y---~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++.. .+++||+|..... .| .=.+|+++.++.+.
T Consensus 66 e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~G-----~~aey~~v~~~~~~ 111 (346)
T 3fbg_A 66 DAIGVVESVGNEVT---------MFNQGDIVYYSGSPDQNG-----SNAEYQLINERLVA 111 (346)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEECCCTTSCC-----SSBSEEEEEGGGEE
T ss_pred ccEEEEEEeCCCCC---------cCCCCCEEEEcCCCCCCc-----ceeEEEEEChHHeE
Confidence 47899999999863 4899999997531 11 12577777776654
No 26
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.34 E-value=1.5 Score=36.24 Aligned_cols=74 Identities=24% Similarity=0.288 Sum_probs=43.6
Q ss_pred eecCCeEEEEecCCC-----CcccceEE----ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC---CCc
Q 044904 64 IPTLNRVLVEKIVPP-----SKTNAGIL----LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN---YGG 131 (155)
Q Consensus 64 ~PLgDRVLVk~~e~e-----~kT~gGIi----LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~---y~G 131 (155)
.|-.|-||||....- -....|-+ .|-.-.--..|+|++||++.. .+++||+|.+.. ..|
T Consensus 49 ~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~---------~~~vGdrV~~~~~~~~~G 119 (363)
T 4dvj_A 49 APAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVT---------LFRPGDEVFYAGSIIRPG 119 (363)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEECCCTTSCC
T ss_pred CCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCCCC---------CCCCCCEEEEccCCCCCc
Confidence 355678999986421 01111211 111112347899999999863 589999999743 112
Q ss_pred eEEEECCEEEEEEecCceEE
Q 044904 132 DHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 132 ~evk~dg~ey~ivre~DILA 151 (155)
.=.+|+++.++.+..
T Consensus 120 -----~~aey~~v~~~~~~~ 134 (363)
T 4dvj_A 120 -----TNAEFHLVDERIVGR 134 (363)
T ss_dssp -----SCBSEEEEEGGGCEE
T ss_pred -----cceEEEEeCHHHeeE
Confidence 126788888776543
No 27
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.12 E-value=1.4 Score=35.38 Aligned_cols=44 Identities=23% Similarity=0.278 Sum_probs=30.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC-C---CceEEEECCEEEEEEecCceEE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN-Y---GGDHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~-y---~G~evk~dg~ey~ivre~DILA 151 (155)
-..|+|++||++.. .+++||+|.... + .| .=.+|+++.++.+..
T Consensus 74 E~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~G-----~~aey~~v~~~~~~~ 121 (321)
T 3tqh_A 74 DFSGEVIELGSDVN---------NVNIGDKVMGIAGFPDHPC-----CYAEYVCASPDTIIQ 121 (321)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEECSTTTCCC-----CSBSEEEECGGGEEE
T ss_pred eeEEEEEEeCCCCC---------CCCCCCEEEEccCCCCCCC-----cceEEEEecHHHhcc
Confidence 36899999999863 589999998542 2 12 125777777776654
No 28
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=82.74 E-value=1.7 Score=36.05 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=32.6
Q ss_pred ecCCeEEEEecCCC-----CcccceEEecCC----CCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 65 PTLNRVLVEKIVPP-----SKTNAGILLPEK----SSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 65 PLgDRVLVk~~e~e-----~kT~gGIiLP~s----a~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
|--|-||||....- -....|-+ |.. -.--..|+|++||++.. .+++||+|...
T Consensus 45 ~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~---------~~~vGdrV~~~ 106 (370)
T 4ej6_A 45 PGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVR---------DIAPGARITGD 106 (370)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred CCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCC---------CCCCCCEEEEC
Confidence 45688999986421 01111211 111 12236899999999863 58999999863
No 29
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=82.69 E-value=1 Score=36.70 Aligned_cols=73 Identities=15% Similarity=0.156 Sum_probs=43.1
Q ss_pred eecCCeEEEEecCCC-----CcccceEE-----ecCCCCCceeeEEEEEcCCc-cCCCCceeeeeeecCCEEEecC---C
Q 044904 64 IPTLNRVLVEKIVPP-----SKTNAGIL-----LPEKSSKLNSGKVIAVGPGA-RDKEGNTIPVAFKEGDTVLLPN---Y 129 (155)
Q Consensus 64 ~PLgDRVLVk~~e~e-----~kT~gGIi-----LP~sa~k~~~G~VVAVG~G~-~~~~G~~~P~~VKvGD~Vlf~~---y 129 (155)
.|--|-||||....- -....|.+ +|-.-.--..|+|+++|++. . .+++||+|.... .
T Consensus 46 ~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~~---------~~~vGdrV~~~~g~~~ 116 (349)
T 3pi7_A 46 APGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPYA---------KSLVGKRVAFATGLSN 116 (349)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTSBCCSEEEEEEEEECSSHHH---------HHHTTCEEEEECTTSS
T ss_pred CCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCCCccceEEEEEEEECCCccC---------CCCCCCEEEEeccCCC
Confidence 355688999986421 11112221 11111234789999999986 3 589999999753 1
Q ss_pred CceEEEECCEEEEEEecCceE
Q 044904 130 GGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 130 ~G~evk~dg~ey~ivre~DIL 150 (155)
.| .=.+|++++++.+.
T Consensus 117 ~G-----~~aey~~v~~~~~~ 132 (349)
T 3pi7_A 117 WG-----SWAEYAVAEAAACI 132 (349)
T ss_dssp CC-----SSBSEEEEEGGGEE
T ss_pred Cc-----cceeeEeechHHeE
Confidence 11 12577777776654
No 30
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=82.34 E-value=1.4 Score=36.80 Aligned_cols=30 Identities=30% Similarity=0.437 Sum_probs=22.0
Q ss_pred ceeeEEEEEcCCccCC-CCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDK-EGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~-~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++...+ .| ..+++||+|...
T Consensus 98 E~~G~V~~vG~~v~~~~~~----~~~~vGdrV~~~ 128 (404)
T 3ip1_A 98 EFSGVVVEAGPEAINRRTN----KRFEIGEPVCAE 128 (404)
T ss_dssp EEEEEEEEECTTCEETTTT----EECCTTCEEEEC
T ss_pred cceEEEEEECCCccccccC----CCCCCCCEEEEC
Confidence 3689999999986321 11 168999999974
No 31
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=81.76 E-value=0.85 Score=37.10 Aligned_cols=25 Identities=52% Similarity=0.591 Sum_probs=21.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2dq4_A 64 EFSGVVEAVGPGVR---------RPQVGDHVSLE 88 (343)
T ss_dssp EEEEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEC
Confidence 46899999999863 58999999974
No 32
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=81.65 E-value=0.89 Score=36.72 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=20.8
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 61 E~aG~V~~vG~~V~---------~~~~GdrV~~~ 85 (348)
T 4eez_A 61 EGIGIVKEIGADVS---------SLQVGDRVSVA 85 (348)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred eEEEEEEEECceee---------ecccCCeEeec
Confidence 36799999999864 58999999764
No 33
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=81.58 E-value=1.4 Score=36.60 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=30.4
Q ss_pred ceeeEEEEEcCCc-cCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGA-RDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~-~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|+++|++. . .+++||+|.....++ =.+|+++.++.+.
T Consensus 97 e~~G~V~~vG~~v~~---------~~~vGdrV~~~~~G~------~aey~~v~~~~~~ 139 (379)
T 3iup_A 97 EGAGVVVEAGSSPAA---------QALMGKTVAAIGGAM------YSQYRCIPADQCL 139 (379)
T ss_dssp CEEEEEEEECSSHHH---------HTTTTCEEEECCSCC------SBSEEEEEGGGEE
T ss_pred eeEEEEEEeCCCccc---------CCCCCCEEEecCCCc------ceeEEEeCHHHeE
Confidence 3689999999975 2 479999999864322 2577777776554
No 34
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=81.57 E-value=0.89 Score=37.07 Aligned_cols=25 Identities=36% Similarity=0.499 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 65 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 89 (348)
T 3two_A 65 EIAGIIKEVGKGVK---------KFKIGDVVGVG 89 (348)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEEe
Confidence 47899999999863 48999999763
No 35
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=81.35 E-value=0.91 Score=37.35 Aligned_cols=25 Identities=36% Similarity=0.626 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 66 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 90 (371)
T 1f8f_A 66 EGSGIIEAIGPNVT---------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ccceEEEEeCCCCC---------CCCCCCEEEec
Confidence 46899999999863 58999999864
No 36
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=81.17 E-value=1.9 Score=35.57 Aligned_cols=43 Identities=21% Similarity=0.280 Sum_probs=29.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|++||++... .+++||+|.....++ =.+|+++.++.+.
T Consensus 90 E~~G~V~~vG~~V~~--------~~~vGdrV~~~~~G~------~aey~~v~~~~~~ 132 (362)
T 2c0c_A 90 EGIGEVVALGLSASA--------RYTVGQAVAYMAPGS------FAEYTVVPASIAT 132 (362)
T ss_dssp EEEEEEEEECTTGGG--------TCCTTCEEEEECSCC------SBSEEEEEGGGCE
T ss_pred eeEEEEEEECCCccC--------CCCCCCEEEEccCCc------ceeEEEEcHHHeE
Confidence 367999999998630 379999998754322 1567777665543
No 37
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=80.80 E-value=0.97 Score=37.21 Aligned_cols=25 Identities=36% Similarity=0.642 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 69 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 93 (374)
T 1cdo_A 69 EGAGIVESVGPGVT---------EFQPGEKVIPL 93 (374)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCc---------cCCCCCEEEeC
Confidence 36899999999863 58999999875
No 38
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=80.65 E-value=0.99 Score=37.08 Aligned_cols=24 Identities=33% Similarity=0.487 Sum_probs=20.3
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|.+
T Consensus 70 E~~G~V~~vG~~v~---------~~~vGdrV~~ 93 (357)
T 2cf5_A 70 EVVGEVVEVGSDVS---------KFTVGDIVGV 93 (357)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEE
T ss_pred ceeEEEEEECCCCC---------CCCCCCEEEE
Confidence 46899999999863 5899999985
No 39
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=80.62 E-value=1 Score=37.13 Aligned_cols=54 Identities=24% Similarity=0.359 Sum_probs=33.1
Q ss_pred ecCCeEEEEecCCC-----CcccceEE---ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 65 PTLNRVLVEKIVPP-----SKTNAGIL---LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 65 PLgDRVLVk~~e~e-----~kT~gGIi---LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
|-.|-||||....- -....|-+ +|-.-.--..|+|++||++.. .+++||+|...
T Consensus 32 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (373)
T 1p0f_A 32 PKAHEVRIKILASGICGSDSSVLKEIIPSKFPVILGHEAVGVVESIGAGVT---------CVKPGDKVIPL 93 (373)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHTTSSCCCSSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCeEEEEEeEEeecchhHHHhcCCCCCCCCcccCcCceEEEEEECCCCC---------ccCCCCEEEEC
Confidence 45688999976421 01111211 121112347899999999863 58999999875
No 40
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=80.58 E-value=1 Score=37.28 Aligned_cols=24 Identities=29% Similarity=0.375 Sum_probs=20.3
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|..
T Consensus 77 E~~G~V~~vG~~V~---------~~~vGDrV~~ 100 (366)
T 1yqd_A 77 EIVGEVTEVGSKVK---------KVNVGDKVGV 100 (366)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred ceEEEEEEECCCCC---------cCCCCCEEEE
Confidence 46899999999863 5899999985
No 41
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=80.51 E-value=1 Score=36.93 Aligned_cols=25 Identities=36% Similarity=0.523 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 70 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 94 (356)
T 1pl8_A 70 EASGTVEKVGSSVK---------HLKPGDRVAIE 94 (356)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 46899999999863 58999999864
No 42
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=80.48 E-value=1 Score=36.56 Aligned_cols=25 Identities=32% Similarity=0.502 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 63 e~~G~V~~vG~~v~---------~~~vGdrV~~~ 87 (345)
T 3jv7_A 63 EGVGTVAELGEGVT---------GFGVGDAVAVY 87 (345)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ccEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 36899999999863 58999999874
No 43
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=80.35 E-value=1 Score=36.96 Aligned_cols=25 Identities=44% Similarity=0.640 Sum_probs=21.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~V~---------~~~vGdrV~~~ 91 (373)
T 2fzw_A 67 LGAGIVESVGEGVT---------KLKAGDTVIPL 91 (373)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cccEEEEEECCCCC---------CCCCCCEEEEC
Confidence 47899999999863 58999999865
No 44
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=80.17 E-value=1.1 Score=36.67 Aligned_cols=25 Identities=36% Similarity=0.597 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 91 (352)
T 1e3j_A 67 EASGTVVKVGKNVK---------HLKKGDRVAVE 91 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEeCCCCC---------CCCCCCEEEEc
Confidence 36799999999763 58999999864
No 45
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=80.13 E-value=1.1 Score=36.99 Aligned_cols=54 Identities=24% Similarity=0.416 Sum_probs=33.1
Q ss_pred ecCCeEEEEecCCCC-----cccceEE---ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 65 PTLNRVLVEKIVPPS-----KTNAGIL---LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 65 PLgDRVLVk~~e~e~-----kT~gGIi---LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
|--|-||||....-- ....|-+ .|-.-.--..|+|++||++.. .+++||+|...
T Consensus 31 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (374)
T 2jhf_A 31 PKAHEVRIKMVATGICRSDDHVVSGTLVTPLPVIAGHEAAGIVESIGEGVT---------TVRPGDKVIPL 92 (374)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHTSSCCCSSBCCCCSEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCeEEEEEeEEeechhhHHHHcCCCCCCCCcccCcCceEEEEEECCCCC---------CCCCCCEEEEC
Confidence 456889998764210 1111111 222222346899999999863 58999999865
No 46
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=80.05 E-value=1.1 Score=36.99 Aligned_cols=54 Identities=30% Similarity=0.392 Sum_probs=32.5
Q ss_pred ecCCeEEEEecCCC-----CcccceE---EecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 65 PTLNRVLVEKIVPP-----SKTNAGI---LLPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 65 PLgDRVLVk~~e~e-----~kT~gGI---iLP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
|--|-||||....- -....|- -+|-.-.--..|+|++||++.. .+++||+|...
T Consensus 31 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~P~v~GhE~~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (376)
T 1e3i_A 31 PKACEVRIQVIATCVCPTDINATDPKKKALFPVVLGHECAGIVESVGPGVT---------NFKPGDKVIPF 92 (376)
T ss_dssp CCTTEEEEEEEEEECCHHHHHTTCTTSCCCSSBCCCCEEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCeEEEEEeEEeEchhhHHHhcCCCCCCCCcccCccccEEEEEECCCCc---------cCCCCCEEEEC
Confidence 45688999976421 0111121 0111112236899999999863 58999999864
No 47
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=79.84 E-value=1.1 Score=36.29 Aligned_cols=24 Identities=46% Similarity=0.559 Sum_probs=20.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|.+
T Consensus 64 E~~G~V~~vG~~v~---------~~~vGdrV~~ 87 (340)
T 3s2e_A 64 EGVGYVSAVGSGVS---------RVKEGDRVGV 87 (340)
T ss_dssp EEEEEEEEECSSCC---------SCCTTCEEEE
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEe
Confidence 47899999999863 4899999954
No 48
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=79.68 E-value=1.1 Score=36.43 Aligned_cols=25 Identities=24% Similarity=0.446 Sum_probs=20.5
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~~GdrV~~~ 91 (347)
T 2hcy_A 67 EGAGVVVGMGENVK---------GWKIGDYAGIK 91 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------CCcCCCEEEEe
Confidence 36799999999763 58999999863
No 49
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=79.32 E-value=1.1 Score=37.22 Aligned_cols=24 Identities=29% Similarity=0.408 Sum_probs=20.4
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|..
T Consensus 68 E~~G~V~~vG~~v~---------~~~vGDrV~~ 91 (398)
T 1kol_A 68 EITGEVIEKGRDVE---------NLQIGDLVSV 91 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEC
T ss_pred ccEEEEEEECCCCC---------cCCCCCEEEE
Confidence 47899999999863 5899999986
No 50
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=79.26 E-value=1.2 Score=36.73 Aligned_cols=55 Identities=22% Similarity=0.252 Sum_probs=33.5
Q ss_pred eecCCeEEEEecCCC-----CcccceEE-----ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 64 IPTLNRVLVEKIVPP-----SKTNAGIL-----LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 64 ~PLgDRVLVk~~e~e-----~kT~gGIi-----LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
.|--|-||||....- -....|-+ +|-.-.--..|+|++||++.. .+++||+|...
T Consensus 50 ~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~---------~~~vGDrV~~~ 114 (363)
T 3uog_A 50 EAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT---------RFRPGDRVIST 114 (363)
T ss_dssp CCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 356688999986421 01111111 111112246899999999863 48999999975
No 51
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=79.17 E-value=1.3 Score=36.08 Aligned_cols=25 Identities=40% Similarity=0.769 Sum_probs=20.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 60 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 84 (352)
T 3fpc_A 60 EAVGEVVEVGSEVK---------DFKPGDRVVVP 84 (352)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEc
Confidence 36899999999863 58999999963
No 52
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=79.14 E-value=1.1 Score=37.34 Aligned_cols=25 Identities=28% Similarity=0.468 Sum_probs=20.8
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 67 E~~G~V~~vG~~v~---------~~~vGDrV~~~ 91 (398)
T 2dph_A 67 EITGEVVEKGSDVE---------LMDIGDLVSVP 91 (398)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEECC
T ss_pred ceEEEEEEECCCCC---------CCCCCCEEEEc
Confidence 46899999999863 58999999963
No 53
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=79.14 E-value=2 Score=35.07 Aligned_cols=71 Identities=24% Similarity=0.235 Sum_probs=41.1
Q ss_pred ecCCeEEEEecCCC-----CcccceEE-----ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEE
Q 044904 65 PTLNRVLVEKIVPP-----SKTNAGIL-----LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHV 134 (155)
Q Consensus 65 PLgDRVLVk~~e~e-----~kT~gGIi-----LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~ev 134 (155)
|-.|-||||....- -....|-+ .|-.-.--..|+|++||++. .+++||+|......|
T Consensus 46 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v----------~~~vGDrV~~~~~~G--- 112 (342)
T 4eye_A 46 AGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGS----------GIKPGDRVMAFNFIG--- 112 (342)
T ss_dssp CCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTS----------SCCTTCEEEEECSSC---
T ss_pred CCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCC----------CCCCCCEEEEecCCC---
Confidence 45578999986421 11112211 11111234789999999864 279999998754332
Q ss_pred EECCEEEEEEecCceE
Q 044904 135 KLGEKDYHLYRDEEIL 150 (155)
Q Consensus 135 k~dg~ey~ivre~DIL 150 (155)
.=.+|+++.++.+.
T Consensus 113 --~~aey~~v~~~~~~ 126 (342)
T 4eye_A 113 --GYAERVAVAPSNIL 126 (342)
T ss_dssp --CSBSEEEECGGGEE
T ss_pred --cceEEEEEcHHHeE
Confidence 12467777666554
No 54
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=79.00 E-value=1.2 Score=36.19 Aligned_cols=25 Identities=44% Similarity=0.652 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++.. .+++||+|...
T Consensus 62 E~~G~V~~vG~~v~---------~~~vGdrV~~~ 86 (339)
T 1rjw_A 62 EGVGIVEEVGPGVT---------HLKVGDRVGIP 86 (339)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cceEEEEEECCCCC---------cCCCCCEEEEe
Confidence 47899999999763 48999999863
No 55
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=78.71 E-value=1.2 Score=37.97 Aligned_cols=24 Identities=38% Similarity=0.714 Sum_probs=20.4
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
..|+|++||++.. .+++||+|...
T Consensus 125 ~~G~Vv~vG~~v~---------~~~vGdrV~~~ 148 (456)
T 3krt_A 125 LAGVVLRTGPGVN---------AWQAGDEVVAH 148 (456)
T ss_dssp CEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEEECCCCC---------CCCCCCEEEEe
Confidence 5799999999864 48999999973
No 56
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.60 E-value=1.2 Score=37.02 Aligned_cols=54 Identities=24% Similarity=0.239 Sum_probs=32.6
Q ss_pred ecCCeEEEEecCCCC-----cccceEE----ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 65 PTLNRVLVEKIVPPS-----KTNAGIL----LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 65 PLgDRVLVk~~e~e~-----kT~gGIi----LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
|-.|-||||....-- ....|-+ +|-.-.--..|+|++||++.. .+++||+|...
T Consensus 45 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~---------~~~vGDrV~~~ 107 (369)
T 1uuf_A 45 PGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVE---------KYAPGDLVGVG 107 (369)
T ss_dssp CCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred CCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCC---------CCCCCCEEEEc
Confidence 456889999764210 1111111 122112347899999999863 58999999853
No 57
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=78.50 E-value=1.2 Score=36.23 Aligned_cols=24 Identities=29% Similarity=0.462 Sum_probs=19.7
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|..
T Consensus 69 e~~G~V~~vG~~v~---------~~~vGdrV~~ 92 (347)
T 1jvb_A 69 EIAGKIEEVGDEVV---------GYSKGDLVAV 92 (347)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred cceEEEEEECCCCC---------CCCCCCEEEe
Confidence 36799999999863 5899999964
No 58
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=78.09 E-value=1.3 Score=36.47 Aligned_cols=24 Identities=33% Similarity=0.583 Sum_probs=19.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++.. .+++||+|..
T Consensus 80 E~~G~V~~vG~~v~---------~~~vGdrV~~ 103 (359)
T 1h2b_A 80 ENVGYIEEVAEGVE---------GLEKGDPVIL 103 (359)
T ss_dssp CEEEEEEEECTTCC---------SCCTTCEEEE
T ss_pred CceEEEEEECCCCC---------CCCCCCEEEe
Confidence 36899999999863 5899999964
No 59
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=77.38 E-value=2.6 Score=34.79 Aligned_cols=77 Identities=16% Similarity=0.071 Sum_probs=40.1
Q ss_pred ecCCeEEEEecCC-----CCcccceEE-ecCCCCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCC---ceEEE
Q 044904 65 PTLNRVLVEKIVP-----PSKTNAGIL-LPEKSSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYG---GDHVK 135 (155)
Q Consensus 65 PLgDRVLVk~~e~-----e~kT~gGIi-LP~sa~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~---G~evk 135 (155)
|--|-||||.... +-....|.. .|..-.--..|+|++||++.. .+++||+|...-+. |....
T Consensus 34 ~~~~eVlVkv~a~gi~~~D~~~~~g~~~~p~v~G~e~~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~~~~~ 104 (371)
T 3gqv_A 34 LPRDQVYVRVEAVAINPSDTSMRGQFATPWAFLGTDYAGTVVAVGSDVT---------HIQVGDRVYGAQNEMCPRTPDQ 104 (371)
T ss_dssp CCTTSEEEEEEEEECCGGGGC-----CCTTSCCCSEEEEEEEEECTTCC---------SCCTTCEEEEECCTTCTTCTTC
T ss_pred CCCCEEEEEEEEEEcCHHHHHHhhcCCCCCccCccccEEEEEEeCCCCC---------CCCCCCEEEEeccCCCCCCCCC
Confidence 3456788887642 111112211 111112347899999999863 58999999754311 00000
Q ss_pred ECCEEEEEEecCceE
Q 044904 136 LGEKDYHLYRDEEIL 150 (155)
Q Consensus 136 ~dg~ey~ivre~DIL 150 (155)
-.=.+|+++.++.+.
T Consensus 105 G~~aey~~v~~~~~~ 119 (371)
T 3gqv_A 105 GAFSQYTVTRGRVWA 119 (371)
T ss_dssp CSSBSEEECCTTCEE
T ss_pred CcCcCeEEEchhheE
Confidence 012577777766554
No 60
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=76.94 E-value=1.5 Score=35.72 Aligned_cols=24 Identities=33% Similarity=0.547 Sum_probs=19.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++||++ . .+++||+|...
T Consensus 66 E~~G~V~~vG~~-~---------~~~~GdrV~~~ 89 (344)
T 2h6e_A 66 ENAGTIVEVGEL-A---------KVKKGDNVVVY 89 (344)
T ss_dssp CEEEEEEEECTT-C---------CCCTTCEEEEC
T ss_pred cceEEEEEECCC-C---------CCCCCCEEEEC
Confidence 367999999997 3 58999999643
No 61
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=76.30 E-value=2.5 Score=34.60 Aligned_cols=23 Identities=26% Similarity=0.351 Sum_probs=19.1
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..| |++||++ . .+++||+|...
T Consensus 64 E~~G-V~~vG~~-~---------~~~vGdrV~~~ 86 (357)
T 2b5w_A 64 EAVG-VVVDPND-T---------ELEEGDIVVPT 86 (357)
T ss_dssp EEEE-EEEECTT-S---------SCCTTCEEEEC
T ss_pred eeEE-EEEECCC-C---------CCCCCCEEEEC
Confidence 3679 9999997 3 58999999875
No 62
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=74.43 E-value=3.5 Score=38.35 Aligned_cols=70 Identities=16% Similarity=0.159 Sum_probs=41.5
Q ss_pred ecCCeEEEEecCC-----CCcccceEEecCC--CCCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEEC
Q 044904 65 PTLNRVLVEKIVP-----PSKTNAGILLPEK--SSKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLG 137 (155)
Q Consensus 65 PLgDRVLVk~~e~-----e~kT~gGIiLP~s--a~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~d 137 (155)
|--|-|+|+.... .-....|.+ |.. -.--..|+|++||++.. .+++||+|...-.++
T Consensus 236 ~~~~eVlV~V~a~gin~~D~~~~~G~~-~~~~~lG~E~aG~V~~vG~~V~---------~~~vGDrV~~~~~G~------ 299 (795)
T 3slk_A 236 LGDGEVRIAMRAAGVNFRDALIALGMY-PGVASLGSEGAGVVVETGPGVT---------GLAPGDRVMGMIPKA------ 299 (795)
T ss_dssp CCSSEEEEEEEEEEECHHHHHHTTTCC-SSCCCSCCCEEEEEEEECSSCC---------SSCTTCEEEECCSSC------
T ss_pred CCCCEEEEEEEEEccCHHHHHHHcCCC-CCCccccceeEEEEEEeCCCCC---------cCCCCCEEEEEecCC------
Confidence 3457899988542 111122322 221 12347899999999863 589999998643322
Q ss_pred CEEEEEEecCceE
Q 044904 138 EKDYHLYRDEEIL 150 (155)
Q Consensus 138 g~ey~ivre~DIL 150 (155)
=.+|+++.++.+.
T Consensus 300 ~ae~~~v~~~~~~ 312 (795)
T 3slk_A 300 FGPLAVADHRMVT 312 (795)
T ss_dssp SSSEEEEETTSEE
T ss_pred CcCEEEeehHHEE
Confidence 1366777666554
No 63
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=71.42 E-value=3 Score=27.92 Aligned_cols=31 Identities=26% Similarity=0.499 Sum_probs=10.1
Q ss_pred eeecCCEEEecCCC-c-----eEEEECC--EEEEEEecC
Q 044904 117 AFKEGDTVLLPNYG-G-----DHVKLGE--KDYHLYRDE 147 (155)
Q Consensus 117 ~VKvGD~Vlf~~y~-G-----~evk~dg--~ey~ivre~ 147 (155)
.+++||.|+++.++ | .+++++| .+|+++.-.
T Consensus 2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y~ 40 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYK 40 (71)
T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEET
T ss_pred cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEEC
Confidence 47899999999987 3 2455665 578877754
No 64
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=71.35 E-value=2.6 Score=33.94 Aligned_cols=26 Identities=35% Similarity=0.399 Sum_probs=21.3
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN 128 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~ 128 (155)
-..|+|++||++.. .+++||+|....
T Consensus 60 E~~G~V~~vG~~V~---------~~~~GdrV~~~~ 85 (346)
T 4a2c_A 60 EFSGYIDAVGSGVD---------DLHPGDAVACVP 85 (346)
T ss_dssp EEEEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred EEEEEEEEECCCcc---------cccCCCeEEeee
Confidence 36799999999874 579999998754
No 65
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=69.99 E-value=3.1 Score=34.06 Aligned_cols=25 Identities=32% Similarity=0.508 Sum_probs=19.5
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEe
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
-..|+|++||++... .+++||+|.+
T Consensus 69 E~~G~V~~vG~~v~~--------~~~~GdrV~~ 93 (360)
T 1piw_A 69 EIVGKVVKLGPKSNS--------GLKVGQRVGV 93 (360)
T ss_dssp CEEEEEEEECTTCCS--------SCCTTCEEEE
T ss_pred CceEEEEEeCCCCCC--------CCCCCCEEEE
Confidence 368999999997521 3799999954
No 66
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=63.55 E-value=4.3 Score=32.33 Aligned_cols=46 Identities=24% Similarity=0.327 Sum_probs=28.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCC-ceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYG-GDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~-G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|+++|. + .+++||+|....+. |....-.=.+|+++.++.+.
T Consensus 64 E~~G~V~~~Gv-----~------~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~ 110 (324)
T 3nx4_A 64 DFAGTVHASED-----P------RFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLV 110 (324)
T ss_dssp EEEEEEEEESS-----T------TCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCE
T ss_pred eeEEEEEEeCC-----C------CCCCCCEEEEcccccCCCCCCceeeEEecCHHHcE
Confidence 36899999994 1 48999999965321 11000012577777776654
No 67
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=53.69 E-value=8.4 Score=31.79 Aligned_cols=29 Identities=28% Similarity=0.578 Sum_probs=20.7
Q ss_pred ceeeEEEEEcCCccCC-CCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDK-EGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~-~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|+++| +.... .+ ..+++||+|...
T Consensus 78 E~~G~V~~vG-~V~~~~~~----~~~~vGdrV~~~ 107 (380)
T 1vj0_A 78 EGAGRVVEVN-GEKRDLNG----ELLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEEEES-SCCBCTTS----CBCCTTCEEEEC
T ss_pred CcEEEEEEeC-CccccccC----CCCCCCCEEEEc
Confidence 4789999999 76411 11 148999999974
No 68
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=47.89 E-value=46 Score=23.74 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=21.1
Q ss_pred eeeecCCEEEecCCC---ceEEEECCEEEEEEecCc
Q 044904 116 VAFKEGDTVLLPNYG---GDHVKLGEKDYHLYRDEE 148 (155)
Q Consensus 116 ~~VKvGD~Vlf~~y~---G~evk~dg~ey~ivre~D 148 (155)
.-|.+||.+..++.. |.+|++| -+++..++
T Consensus 12 ykV~~Gd~i~vekl~~~~G~~v~~~---VLlv~~~~ 44 (101)
T 3v2d_V 12 YRVEPGLKLRVEKLDAEPGATVELP---VLLLGGEK 44 (101)
T ss_dssp EEECTTCEEEESCCSCCTTCEEEEC---EEEEESSS
T ss_pred EEEeCCCEEEECCcCCCCCCEEEEE---EEEECCCc
Confidence 368899999887743 7788887 44445555
No 69
>3pqh_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 1.29A {Bacteriophage PHI92}
Probab=46.10 E-value=38 Score=25.41 Aligned_cols=35 Identities=9% Similarity=0.115 Sum_probs=25.0
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKL 136 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~ 136 (155)
-..|.|||+..+++ .+..+ .|+..+|..+ |..|.+
T Consensus 18 ~S~gVvIa~~d~ry------R~~gL-~GEvaiY~~~-G~~I~L 52 (127)
T 3pqh_A 18 DSEKVIISNNKQTY------ASFDP-NGNISVYNTQ-GMKIDM 52 (127)
T ss_dssp --CCEEEEETTTEE------EEECT-TSCEEEEETT-SCEEEE
T ss_pred ecccEEEEeCCccc------ccCCC-CCcEEEEcCC-CCEEEE
Confidence 47899999987664 44457 9999999986 655544
No 70
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=46.03 E-value=30 Score=25.31 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=19.9
Q ss_pred cCCCCceeee-eeecCCEEEecCCCce
Q 044904 107 RDKEGNTIPV-AFKEGDTVLLPNYGGD 132 (155)
Q Consensus 107 ~~~~G~~~P~-~VKvGD~Vlf~~y~G~ 132 (155)
..++|...++ ++++||+|+=.+..|.
T Consensus 9 ~~~~G~~k~i~eL~~GD~Vla~d~~G~ 35 (145)
T 1at0_A 9 LLESGVRKPLGELSIGDRVLSMTANGQ 35 (145)
T ss_dssp EBTTSCEEEGGGCCTTCEEEEECTTSC
T ss_pred EeCCCCEeEHHHcCCCCEEEEECCCCC
Confidence 3467888788 5999999997665664
No 71
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=44.89 E-value=25 Score=28.03 Aligned_cols=38 Identities=26% Similarity=0.360 Sum_probs=25.5
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCceEE
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEILG 151 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DILA 151 (155)
..|+|++.|. + .+++||+|.... | =.+|+++.++.+..
T Consensus 78 ~~G~V~~~~v-----~------~~~vGdrV~~~G--~------~aey~~v~~~~~~~ 115 (336)
T 4b7c_A 78 GVGKVLVSKH-----P------GFQAGDYVNGAL--G------VQDYFIGEPKGFYK 115 (336)
T ss_dssp EEEEEEEECS-----T------TCCTTCEEEEEC--C------SBSEEEECCTTCEE
T ss_pred eEEEEEecCC-----C------CCCCCCEEeccC--C------ceEEEEechHHeEE
Confidence 5899999652 1 489999999642 1 25677777665543
No 72
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=39.97 E-value=16 Score=29.09 Aligned_cols=46 Identities=26% Similarity=0.358 Sum_probs=27.5
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCC-ceEEEECCEEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYG-GDHVKLGEKDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~-G~evk~dg~ey~ivre~DIL 150 (155)
-..|+|+++|. + .+++||+|....+. |....-.=.+|+++.++.+.
T Consensus 67 E~~G~V~~~~v-----~------~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~ 113 (328)
T 1xa0_A 67 DLAGVVVSSQH-----P------RFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLV 113 (328)
T ss_dssp EEEEEEEECCS-----S------SCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCE
T ss_pred ceEEEEEecCC-----C------CCCCCCEEEEccccCCCCCCccceeEEEechHHeE
Confidence 46899999653 1 58999999965321 11000012577777776554
No 73
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=39.17 E-value=32 Score=24.89 Aligned_cols=29 Identities=17% Similarity=0.304 Sum_probs=21.0
Q ss_pred cCCccC-CCCceeeeeeecCCEEEecC-CCceE
Q 044904 103 GPGARD-KEGNTIPVAFKEGDTVLLPN-YGGDH 133 (155)
Q Consensus 103 G~G~~~-~~G~~~P~~VKvGD~Vlf~~-y~G~e 133 (155)
|..... ++|+ +..++.||.++|++ +.|+-
T Consensus 70 G~~~lt~ddG~--~~~l~aGD~~~~P~G~~gtW 100 (116)
T 3es4_A 70 GEALYSQADAD--PVKIGPGSIVSIAKGVPSRL 100 (116)
T ss_dssp CCEEEEETTCC--CEEECTTEEEEECTTCCEEE
T ss_pred eEEEEEeCCCe--EEEECCCCEEEECCCCeEEE
Confidence 444443 4565 56899999999999 77764
No 74
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=37.85 E-value=44 Score=22.69 Aligned_cols=38 Identities=16% Similarity=0.198 Sum_probs=26.3
Q ss_pred EEEEEcCCccC---CCCceeeeeeecCCEEEecCCCceEEE
Q 044904 98 KVIAVGPGARD---KEGNTIPVAFKEGDTVLLPNYGGDHVK 135 (155)
Q Consensus 98 ~VVAVG~G~~~---~~G~~~P~~VKvGD~Vlf~~y~G~evk 135 (155)
.++.++.|... ++|+.....++.||.+.++.-..-.+.
T Consensus 40 ~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~ 80 (98)
T 2ozi_A 40 VVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVR 80 (98)
T ss_dssp EEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEE
T ss_pred EEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCE
Confidence 67778888743 477655678999999999875433343
No 75
>1b12_A Signal peptidase I; serine proteinase, serine-dependant hydrolase, signal peptid processing, protein translocation; HET: 1PN; 1.95A {Escherichia coli} SCOP: b.87.1.2 PDB: 3s04_A* 1t7d_A* 3iiq_A* 1kn9_A*
Probab=36.30 E-value=73 Score=24.99 Aligned_cols=72 Identities=19% Similarity=0.182 Sum_probs=36.9
Q ss_pred hhhccceecCCeEEEEecCCCCcccceEEecCCC------CCceeeEEEEEcCCccCCCCceeee-eeecCCEEEecCCC
Q 044904 58 AMAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKS------SKLNSGKVIAVGPGARDKEGNTIPV-AFKEGDTVLLPNYG 130 (155)
Q Consensus 58 ~m~~~i~PLgDRVLVk~~e~e~kT~gGIiLP~sa------~k~~~G~VVAVG~G~~~~~G~~~P~-~VKvGD~Vlf~~y~ 130 (155)
+|.-.|. -||+|||.+.. -|+=||-.. ..+..|.||..-.... .+...+.- .--+||+|.+.+-+
T Consensus 15 SM~Ptl~-~GD~vlv~k~~------yg~r~P~~~~~l~~~~~~~rGDIvvf~~p~~-~~~~~iKRViglpGD~v~i~~~~ 86 (248)
T 1b12_A 15 SMMPTLL-IGDFILVEKFA------YGIKDPIYQKTLIETGHPKRGDIVVFKYPED-PKLDYIKRAVGLPGDKVTYDPVS 86 (248)
T ss_dssp TTTTTSC-TTEEEEEEESE------EEEECGGGSCEEEEECCCCTTCEEEEECTTC-TTSEEEEEEEECTTCEEEEETTT
T ss_pred ccccccc-CCCEEEEEecc------cCcccccccccccccCCCCCCcEEEEEeCCC-CCceEEEEEEeeCCCEEEEEcCc
Confidence 4555554 49999998742 333333321 2456677777653210 11112221 22478888887553
Q ss_pred ceEEEECC
Q 044904 131 GDHVKLGE 138 (155)
Q Consensus 131 G~evk~dg 138 (155)
| .+.+||
T Consensus 87 ~-~l~ING 93 (248)
T 1b12_A 87 K-ELTIQP 93 (248)
T ss_dssp T-EEEEET
T ss_pred e-EEEECC
Confidence 3 344454
No 76
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=36.22 E-value=58 Score=26.66 Aligned_cols=50 Identities=20% Similarity=0.333 Sum_probs=40.2
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEEC---CEEEEEEec
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLG---EKDYHLYRD 146 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~d---g~ey~ivre 146 (155)
..|.-|==|.|.+..||+.. .|+.||.+.++.|....+.-- .-+|++.++
T Consensus 208 eh~~~vL~G~g~y~l~~~~~--~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 208 QHGLLLLEGQGIYRLGDNWY--PVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp CEEEEEEECEEEEEETTEEE--EEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred ceEEEEEeceEEEEECCEEE--EecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 47888888999988888654 699999999999998888753 367777764
No 77
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=35.10 E-value=18 Score=28.93 Aligned_cols=23 Identities=22% Similarity=0.382 Sum_probs=18.4
Q ss_pred eeeEEEE--EcCCccCCCCceeeeeeecCCEEEe
Q 044904 95 NSGKVIA--VGPGARDKEGNTIPVAFKEGDTVLL 126 (155)
Q Consensus 95 ~~G~VVA--VG~G~~~~~G~~~P~~VKvGD~Vlf 126 (155)
..|.|++ ||++.. .+++||+|..
T Consensus 78 ~~G~~~~GvV~~~v~---------~~~vGdrV~~ 102 (345)
T 2j3h_A 78 IQGYGVSRIIESGHP---------DYKKGDLLWG 102 (345)
T ss_dssp CEEEEEEEEEEECST---------TCCTTCEEEE
T ss_pred eecceEEEEEecCCC---------CCCCCCEEEe
Confidence 5789999 997542 4899999985
No 78
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=33.65 E-value=59 Score=26.05 Aligned_cols=51 Identities=20% Similarity=0.335 Sum_probs=39.3
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEEC---CEEEEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLG---EKDYHLYRD 146 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~d---g~ey~ivre 146 (155)
..++..|==|.|....+|+.. .|+.||.+.+..+....+.-. .-.|+++++
T Consensus 212 ~e~~~~il~G~~~~~~~~~~~--~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d 265 (278)
T 1sq4_A 212 MEHGLYVLEGKAVYRLNQDWV--EVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKD 265 (278)
T ss_dssp EEEEEEEEECEEEEEETTEEE--EEETTCEEEEEESCCEEEECCSSSCEEEEEEEE
T ss_pred ccEEEEEEeCEEEEEECCEEE--EeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEE
Confidence 356777788888887778655 689999999999998888752 247777764
No 79
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=31.87 E-value=53 Score=25.63 Aligned_cols=50 Identities=24% Similarity=0.347 Sum_probs=37.3
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEE-C--CEEEEEEec
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKL-G--EKDYHLYRD 146 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~-d--g~ey~ivre 146 (155)
.++..|-=|.+....+|+.. .|+.||.+.|+.+....+.- . .-.|+++++
T Consensus 187 ee~~~vLeG~~~~~~~~~~~--~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 187 EHGLLMLEGEGLYKLEENYY--PVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp CEEEEEEECEEEEEETTEEE--EEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred eEEEEEEECEEEEEECCEEE--EcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 45666777888777777655 69999999999999887765 2 356777764
No 80
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=36.32 E-value=11 Score=24.95 Aligned_cols=31 Identities=29% Similarity=0.517 Sum_probs=21.9
Q ss_pred eeecCCEEEecCCCc------eEEEECC--EEEEEEecC
Q 044904 117 AFKEGDTVLLPNYGG------DHVKLGE--KDYHLYRDE 147 (155)
Q Consensus 117 ~VKvGD~Vlf~~y~G------~evk~dg--~ey~ivre~ 147 (155)
.+++||.|+|+.++- .+.+++| .+|++++-.
T Consensus 6 ~f~~GD~VVy~~hGvg~i~gIe~~~v~G~~~~y~~l~~~ 44 (70)
T 2lqk_A 6 EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFP 44 (70)
Confidence 589999999999883 2233444 578887753
No 81
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=30.00 E-value=27 Score=27.75 Aligned_cols=44 Identities=23% Similarity=0.399 Sum_probs=26.9
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCC-ceEEEECC--EEEEEEecCceE
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYG-GDHVKLGE--KDYHLYRDEEIL 150 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~-G~evk~dg--~ey~ivre~DIL 150 (155)
-..|+|+++|. + .+++||+|....+. |.. .+| .+|+++.++.+.
T Consensus 68 E~~G~V~~~~v-----~------~~~vGdrV~~~~~~~g~~--~~G~~aey~~v~~~~~~ 114 (330)
T 1tt7_A 68 DAAGTVVSSND-----P------RFAEGDEVIATSYELGVS--RDGGLSEYASVPGDWLV 114 (330)
T ss_dssp EEEEEEEECSS-----T------TCCTTCEEEEESTTBTTT--BCCSSBSSEEECGGGEE
T ss_pred eEEEEEEEcCC-----C------CCCCCCEEEEcccccCCC--CCccceeEEEecHHHeE
Confidence 36799999753 1 48999999965321 110 111 567777766554
No 82
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=29.40 E-value=62 Score=27.96 Aligned_cols=44 Identities=18% Similarity=0.239 Sum_probs=29.9
Q ss_pred cCCccCCCCceeeeeeecCCEEEecCCCceEEEECC--EEEEEEecCc
Q 044904 103 GPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGE--KDYHLYRDEE 148 (155)
Q Consensus 103 G~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg--~ey~ivre~D 148 (155)
|.|...-+|+. ..++.||.++.+.+.--.+.-.+ ++..++.-.|
T Consensus 323 G~G~~~V~ge~--~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~D 368 (394)
T 3bu7_A 323 GQGYSIVGGKR--FDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFND 368 (394)
T ss_dssp CCEEEEETTEE--EEECTTCEEEECTTCCEEEEECCSSCCEEEEEEES
T ss_pred CeEEEEECCEE--EEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEeeC
Confidence 88766566764 47999999999998766665433 5555544433
No 83
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=29.18 E-value=30 Score=23.46 Aligned_cols=12 Identities=33% Similarity=0.429 Sum_probs=9.7
Q ss_pred eeecCCEEEecC
Q 044904 117 AFKEGDTVLLPN 128 (155)
Q Consensus 117 ~VKvGD~Vlf~~ 128 (155)
++++||.|+..-
T Consensus 35 ~~~vGD~VLVH~ 46 (75)
T 2z1c_A 35 DTKPGDWVIVHT 46 (75)
T ss_dssp TCCTTCEEEEET
T ss_pred CCCCCCEEEEec
Confidence 478999999754
No 84
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=28.36 E-value=1.5e+02 Score=21.00 Aligned_cols=21 Identities=33% Similarity=0.555 Sum_probs=13.5
Q ss_pred eeecCCEEEecCCC---ceEEEEC
Q 044904 117 AFKEGDTVLLPNYG---GDHVKLG 137 (155)
Q Consensus 117 ~VKvGD~Vlf~~y~---G~evk~d 137 (155)
-|.+||.+..++-. |.+|++|
T Consensus 13 kV~~Gd~i~vekl~~~~G~~v~~~ 36 (103)
T 3r8s_R 13 RVSEGQTVRLEKLDIATGETVEFA 36 (103)
T ss_dssp EEETTCEEEESCCCSCTTCEEEEC
T ss_pred EEeCCCEEEECCcCCCCCCEEEEe
Confidence 57777777776632 5666665
No 85
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=25.70 E-value=69 Score=25.34 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=22.8
Q ss_pred eeeEEEEEcCCccCCCCceeeeeeecCCEEEecCCCceEEEECCEEEEEEecCce
Q 044904 95 NSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPNYGGDHVKLGEKDYHLYRDEEI 149 (155)
Q Consensus 95 ~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~y~G~evk~dg~ey~ivre~DI 149 (155)
..|+|++.|. + .+++||+|.... | =.+|+++.++.+
T Consensus 71 ~~G~Vv~~~v-----~------~~~vGdrV~~~g--~------~aey~~v~~~~~ 106 (333)
T 1v3u_A 71 QVARVVESKN-----S------AFPAGSIVLAQS--G------WTTHFISDGKGL 106 (333)
T ss_dssp EEEEEEEESC-----T------TSCTTCEEEECC--C------SBSEEEESSTTE
T ss_pred eEEEEEecCC-----C------CCCCCCEEEecC--c------eEEEEEechHHe
Confidence 5788988642 1 489999998742 1 145666555544
No 86
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=25.36 E-value=1.2e+02 Score=21.07 Aligned_cols=37 Identities=32% Similarity=0.607 Sum_probs=23.7
Q ss_pred eeEEEEEcCCccCC---CCceeeeeeecCCEEEecCCCceEEEEC
Q 044904 96 SGKVIAVGPGARDK---EGNTIPVAFKEGDTVLLPNYGGDHVKLG 137 (155)
Q Consensus 96 ~G~VVAVG~G~~~~---~G~~~P~~VKvGD~Vlf~~y~G~evk~d 137 (155)
-|.|+. |....++ +||-.|...++||.| |+|+-+.-+
T Consensus 47 Dg~v~~-g~~~vdeS~LTGEs~pv~k~~g~~v----~aGt~~~~G 86 (113)
T 2hc8_A 47 DGVVVE-GESYVDESMISGEPVPVLKSKGDEV----FGATINNTG 86 (113)
T ss_dssp EEEEEE-CCEEEECHHHHCCSSCEEECTTCEE----CTTCEECSS
T ss_pred eEEEEE-ceEEEEccccCCCCccEEECCCCEE----EeCCEEeec
Confidence 445544 3333333 588889999999986 577766533
No 87
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=24.94 E-value=2e+02 Score=20.86 Aligned_cols=40 Identities=10% Similarity=0.101 Sum_probs=31.7
Q ss_pred CCCceeeeeeecCCEEEecCCCceEEEE---CCEEEEEEecCc
Q 044904 109 KEGNTIPVAFKEGDTVLLPNYGGDHVKL---GEKDYHLYRDEE 148 (155)
Q Consensus 109 ~~G~~~P~~VKvGD~Vlf~~y~G~evk~---dg~ey~ivre~D 148 (155)
.+|.......+.||+|-.....-.++++ ||..|.||..++
T Consensus 53 ~tG~~~e~tf~s~~kve~~~ve~~~~qylY~dg~~~~fMD~et 95 (136)
T 1bkb_A 53 FDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMRD 95 (136)
T ss_dssp TTCCEEEEEEETTSEEEECCCEEEEEEEEEECSSEEEEEETTT
T ss_pred CCCCeEEEEEcCCCEeeeceEEEEEEEEEEecCCEEEEEeCCC
Confidence 4788888889999999888876555543 789999998773
No 88
>3t1e_A Hemagglutinin-neuraminidase; beta-propeller, 4 helix bundle, neuraminidase membrane protein, ectodomain, hydrolase; 3.30A {Newcastle disease virus}
Probab=24.64 E-value=68 Score=29.18 Aligned_cols=87 Identities=15% Similarity=0.011 Sum_probs=60.7
Q ss_pred cccCCcCccceeeeccccCCCCCcchhhHhhhccceecCCeEEEEecCCCCcccceEEecCCCCCceeeEEEEEcCCccC
Q 044904 29 SRSRASPVSPVILQWQHCPKGPNFCRESKAMAKRLIPTLNRVLVEKIVPPSKTNAGILLPEKSSKLNSGKVIAVGPGARD 108 (155)
Q Consensus 29 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~m~~~i~PLgDRVLVk~~e~e~kT~gGIiLP~sa~k~~~G~VVAVG~G~~~ 108 (155)
-|+.||=+...++=|..|+..+.--. ... .=....+.+|.+..-..+.++.-+ -+..-...-.+..=+||+|
T Consensus 200 NrkSCSi~a~~~gc~~LCs~~t~~E~--~Dy--~s~~~~~m~l~~L~~~Gt~~e~~~-~~~~~~~~w~alYP~vGSG--- 271 (537)
T 3t1e_A 200 NRKSCSVSATPLGCDMLCSKVTETEE--EDY--NSVIPTSMVHGRLGFDGQYHEKDL-DVTTLFGDWVANYPGVGGG--- 271 (537)
T ss_dssp CBCSCEEEEETTEEEEEEEBCCSCHH--HHT--TCSSCCCEEEEEECTTSCEEEEEE-CTTTTTTTEEEEEECBSCC---
T ss_pred ccceEEEEEccCCEEEEEeecccCch--hhc--cCCCCCceEEEEEEeCCeEEEEec-CCccccccceEEcCCCCce---
Confidence 58888888888889999977653322 222 234556778888876666665533 2333455677888889987
Q ss_pred CCCceeeeeeecCCEEEecCCCce
Q 044904 109 KEGNTIPVAFKEGDTVLLPNYGGD 132 (155)
Q Consensus 109 ~~G~~~P~~VKvGD~Vlf~~y~G~ 132 (155)
+..||+++|+-|+|.
T Consensus 272 ---------i~~~~~l~FP~yGGl 286 (537)
T 3t1e_A 272 ---------SFIDNRVWFPVYGGL 286 (537)
T ss_dssp ---------EEETTEEEEEEEEEE
T ss_pred ---------EEECCEEEEEeeCCc
Confidence 468999999999985
No 89
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=23.09 E-value=12 Score=27.72 Aligned_cols=34 Identities=26% Similarity=0.512 Sum_probs=21.2
Q ss_pred cceEEecCCC-CCceeeEEEEEcCCccCCCCceeeeeeecCCEEEecC
Q 044904 82 NAGILLPEKS-SKLNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLPN 128 (155)
Q Consensus 82 ~gGIiLP~sa-~k~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~~ 128 (155)
..||-||.++ +....|+-|+.. ++++||.|+|..
T Consensus 44 ~~Gi~lPr~s~~q~~~g~~V~~~-------------~l~pGDLvFf~~ 78 (135)
T 2k1g_A 44 QFGLELPRSTYEQQEMGKSVSRS-------------NLRTGDLVLFRA 78 (135)
T ss_dssp TTCCCCCSSHHHHGGGSEEECGG-------------GCCTTEEEEEEE
T ss_pred cCCCCCCCCHHHHhhCCcEecHH-------------HccCCcEEEECC
Confidence 3577788773 223344433221 589999999975
No 90
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=23.06 E-value=38 Score=27.51 Aligned_cols=22 Identities=27% Similarity=0.291 Sum_probs=16.6
Q ss_pred ceeeEEEEEcCCccCCCCceeeeeeecCCEEEec
Q 044904 94 LNSGKVIAVGPGARDKEGNTIPVAFKEGDTVLLP 127 (155)
Q Consensus 94 ~~~G~VVAVG~G~~~~~G~~~P~~VKvGD~Vlf~ 127 (155)
-..|+|++ ++ . .+++||+|...
T Consensus 67 E~~G~V~~--~~-~---------~~~~GDrV~~~ 88 (366)
T 2cdc_A 67 EAIGVVEE--SY-H---------GFSQGDLVMPV 88 (366)
T ss_dssp EEEEEECS--CC-S---------SCCTTCEEEEC
T ss_pred ceEEEEEe--CC-C---------CCCCCCEEEEc
Confidence 36799998 43 2 58999999974
No 91
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=22.49 E-value=95 Score=26.77 Aligned_cols=41 Identities=22% Similarity=0.240 Sum_probs=29.6
Q ss_pred EcCCcc-CCCCceeeeeeecCCEEEecCCCceEEEE-C-CEEEEEE
Q 044904 102 VGPGAR-DKEGNTIPVAFKEGDTVLLPNYGGDHVKL-G-EKDYHLY 144 (155)
Q Consensus 102 VG~G~~-~~~G~~~P~~VKvGD~Vlf~~y~G~evk~-d-g~ey~iv 144 (155)
=|.|.. ..+|+.. .++.||.++.+....-.+.. + ++...++
T Consensus 151 eG~G~~t~v~G~~~--~~~~GD~i~~P~g~~H~~~N~~gde~l~~l 194 (394)
T 3bu7_A 151 EGSGAYTIVDGHKV--ELGANDFVLTPNGTWHEHGILESGTECIWQ 194 (394)
T ss_dssp ECSCEEEEETTEEE--EECTTCEEEECTTCCEEEEECTTCCCEEEE
T ss_pred EeeEEEEEECCEEE--EEcCCCEEEECcCCCEEEEcCCCCCCEEEE
Confidence 388855 5677654 68999999999887777766 4 4555555
No 92
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=21.93 E-value=1.5e+02 Score=21.70 Aligned_cols=40 Identities=10% Similarity=0.116 Sum_probs=31.1
Q ss_pred CCCceeeeeeecCCEEEecCCCceEEEE---CCEEEEEEecCc
Q 044904 109 KEGNTIPVAFKEGDTVLLPNYGGDHVKL---GEKDYHLYRDEE 148 (155)
Q Consensus 109 ~~G~~~P~~VKvGD~Vlf~~y~G~evk~---dg~ey~ivre~D 148 (155)
.+|.......+.||+|-.....-.++.+ ||..|.||..++
T Consensus 51 ~tG~~~e~tf~s~~~ve~~~ve~~~~qylY~dg~~~~fMD~et 93 (138)
T 1iz6_A 51 FDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDMET 93 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEECSSEEEEECTTT
T ss_pred CCCCEEEEEecCCCEEeeceEEEEEEEEEEeCCCEEEEEeCCC
Confidence 4788888889999999888876655543 788999998763
No 93
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=21.44 E-value=1.4e+02 Score=23.46 Aligned_cols=47 Identities=11% Similarity=0.035 Sum_probs=30.8
Q ss_pred EEEEc--CCccCCCCcee--eeeee-cCCEEEecCCCceEEEECCEEEEEEecCc
Q 044904 99 VIAVG--PGARDKEGNTI--PVAFK-EGDTVLLPNYGGDHVKLGEKDYHLYRDEE 148 (155)
Q Consensus 99 VVAVG--~G~~~~~G~~~--P~~VK-vGD~Vlf~~y~G~evk~dg~ey~ivre~D 148 (155)
|.-.| .|...-||+++ +..++ .||.+.+ +|..+++.+++..++...+
T Consensus 127 l~~l~s~ngtvyvNg~~i~~~~~L~~~GD~I~i---g~~~~~~~~~~l~i~~~~~ 178 (238)
T 1wv3_A 127 VRIVHDKNTDVYINYELQEQLTNKAYIGDHIYV---EGIWLEVQADGLNVLSQNT 178 (238)
T ss_dssp EEEECCTTCCEEETTEECCSSEEEEETTCEEEE---TTEEEEECSSEEEEECSSC
T ss_pred EEEccCCCCCEEECCEEeccceeccCCcCEEEE---CCEEEEEECCEEEEEeccc
Confidence 44454 45322456543 34689 9999998 6678888888877765554
Done!