Your job contains 1 sequence.
>044905
RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK
RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV
AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED
FSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAENKVVKVFTDPSAPARR
VDELFSAIAEDGRRAAYAEALAKEKAEKEARIAAEKAREAAEAATKLEEEVKKLSEQEAK
AASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIPKVQIAT
VRGQAKARTLPSTKAAVKQTTAKPRAVTKPKEELPKAKAKQINESKPEVRKAFGGLFQQE
TIYVDDD
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044905
(427 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2102842 - symbol:PTAC16 "plastid transcription... 1216 1.0e-123 1
TAIR|locus:2087901 - symbol:Tic62 "translocon at the inne... 192 8.7e-12 2
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 153 1.6e-08 1
>TAIR|locus:2102842 [details] [associations]
symbol:PTAC16 "plastid transcriptionally active 16"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009295
"nucleoid" evidence=IDA] [GO:0009508 "plastid chromosome"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IEP] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0009902
"chloroplast relocation" evidence=RCA] [GO:0010027 "thylakoid
membrane organization" evidence=RCA] [GO:0010103 "stomatal complex
morphogenesis" evidence=RCA] [GO:0010114 "response to red light"
evidence=RCA] [GO:0010218 "response to far red light" evidence=RCA]
[GO:0015979 "photosynthesis" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0019761 "glucosinolate
biosynthetic process" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] InterPro:IPR016040 EMBL:CP002686
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0007623 GO:GO:0009941
GO:GO:0009535 EMBL:AL096859 UniGene:At.21811 InterPro:IPR008030
Pfam:PF05368 GO:GO:0009508 IPI:IPI00542797 PIR:T12970
RefSeq:NP_566886.2 UniGene:At.21714 UniGene:At.71100
UniGene:At.71553 ProteinModelPortal:Q9STF2 SMR:Q9STF2 IntAct:Q9STF2
STRING:Q9STF2 PRIDE:Q9STF2 ProMEX:Q9STF2 EnsemblPlants:AT3G46780.1
GeneID:823831 KEGG:ath:AT3G46780 TAIR:At3g46780
HOGENOM:HOG000029181 InParanoid:Q9STF2 OMA:YTLIKTS PhylomeDB:Q9STF2
ProtClustDB:CLSN2680891 Genevestigator:Q9STF2 Uniprot:Q9STF2
Length = 510
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 257/433 (59%), Positives = 311/433 (71%)
Query: 1 RKDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELK 60
+KD GT+FVAGATGQAG+RIAQTLL+ GFSVRAGVP+LGAAQ+LAR+AA+YKILS +E+K
Sbjct: 88 KKDPGTIFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAAQDLARVAATYKILSNDEVK 147
Query: 61 RLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGVGHV 120
RLNAV+S F AESIAKAIGNA KVVVT+G TE+GP ++VSTSDA V+QAA+LAGV HV
Sbjct: 148 RLNAVQSPFQDAESIAKAIGNATKVVVTVGATENGPDAQVSTSDALLVVQAAELAGVSHV 207
Query: 121 AIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSLTED 180
AI+YDG T + STYNVLDGI+SFF NLF+++QPLT+ + ++KV +TDV+YT IKTSLTED
Sbjct: 208 AIVYDG-TISGSTYNVLDGITSFFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTED 266
Query: 181 FSPESSYNVVVSAEASVDAND------YKVAKSQIASLVADVFSNTAVAENKVVKVFTDP 234
FSPE +YNVVVSAE S + YKV K +IASLVAD+F+NTAVAENKVV+V TDP
Sbjct: 267 FSPEKAYNVVVSAEGSNSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDP 326
Query: 235 SAPARRVDELFSAIAEDGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 294
SAP+R VDELFS I EDGR
Sbjct: 327 SAPSRPVDELFSVIPEDGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKL 386
Query: 295 SEQEAKAASLAEEAQEKADVAGAPMDTLLSKAKGIGSGFSWDKFSSQITTAVQKSTDQIP 354
SE+EA+AASLAE+AQ+KAD G +D L +KAK I SG SW+K SQ TA+Q +++ P
Sbjct: 387 SEKEAEAASLAEDAQQKADAVGVTVDGLFNKAKDISSGLSWNKLGSQFATAIQNASET-P 445
Query: 355 KVQIATVRGQAKARTLPSTKAAVKQTTAKPRAVTXXXXXXXXXXXXQINESKPEVRKAFG 414
KVQ+ATVRGQAKAR LP KA VKQ + P A + + + EVRK FG
Sbjct: 446 KVQVATVRGQAKARNLPPKKAVVKQRPSSPFA--------SKPKEERPKKPEKEVRKVFG 497
Query: 415 GLFQQETIYVDDD 427
GLF+QETIY+DDD
Sbjct: 498 GLFKQETIYIDDD 510
>TAIR|locus:2087901 [details] [associations]
symbol:Tic62 "translocon at the inner envelope membrane
of chloroplasts 62" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0010103
"stomatal complex morphogenesis" evidence=RCA] [GO:0016556 "mRNA
modification" evidence=RCA] [GO:0019684 "photosynthesis, light
reaction" evidence=RCA] InterPro:IPR016040 GO:GO:0009570
EMBL:CP002686 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0015031
GO:GO:0009941 GO:GO:0009706 GO:GO:0009535 eggNOG:COG0702
EMBL:AP002039 EMBL:BT002039 EMBL:BT008403 IPI:IPI00530638
RefSeq:NP_188519.2 UniGene:At.27605 ProteinModelPortal:Q8H0U5
STRING:Q8H0U5 PaxDb:Q8H0U5 PRIDE:Q8H0U5 EnsemblPlants:AT3G18890.1
GeneID:821422 KEGG:ath:AT3G18890 TAIR:At3g18890
HOGENOM:HOG000090541 InParanoid:Q8H0U5 OMA:ICCIGAS PhylomeDB:Q8H0U5
ProtClustDB:PLN03209 Genevestigator:Q8H0U5 Uniprot:Q8H0U5
Length = 641
Score = 192 (72.6 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 64/253 (25%), Positives = 118/253 (46%)
Query: 2 KDSGTVFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEE--- 58
K+ VFVAGATG+ G R + LL+ GF VRAGV A L + K+ + +E
Sbjct: 79 KEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQ 138
Query: 59 -LKRLNAVESNFDSAESIAKAIGNAGKVVVTIGPTEDGPTSEVSTSDAFQVIQAAQLAGV 117
+++L VE + + +SI A+GNA ++ IG +E S+++ + L
Sbjct: 139 PVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEK-EISDITGPYRIDYLATKNLVDA 197
Query: 118 GHVAIIYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQKVIETDVSYTFIKTSL 177
A + + + N G + NLF + + +IE+ ++Y ++
Sbjct: 198 ATSAKVNNFILVTSLGTNKF-GFPAAILNLFW-GVLCWKRKAEEALIESGLNYAIVRPGG 255
Query: 178 TEDFSPESSYNVVVSAEASVDANDY--KVAKSQIASLVADVFSNTAVAENKVVKVFTDPS 235
E P +Y + ++D + +V+ Q+A L+A + N ++ +K+V+V + +
Sbjct: 256 ME--RPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSFSKIVEVVAETT 313
Query: 236 APARRVDELFSAI 248
AP +++L I
Sbjct: 314 APLTPIEKLLEKI 326
Score = 39 (18.8 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 11/45 (24%), Positives = 21/45 (46%)
Query: 340 SQITTAVQKSTDQIPKVQIATVRGQAKARTLPSTKAAVKQTTAKP 384
S+I V ++T + ++ + +K +P KA+V KP
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKP 347
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 153 (58.9 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 71/252 (28%), Positives = 120/252 (47%)
Query: 7 VFVAGATGQAGVRIAQTLLREGFSVRAGVPELGAAQELARLAASYKILSKEELKRLNAVE 66
VFVAGATGQ G RI + LL GF+V+AGV ++ A+ S+K ++ R + E
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAK------TSFKDDPSLQIVRADVTE 102
Query: 67 SNFDSAESIAKAIGNAGKVVV-TIG--PTEDGPTS-EVSTSDAFQVIQAAQLAGVGHVAI 122
+ +A+ IG+ + V+ G P D T +V ++ A + GV +
Sbjct: 103 G----PDKLAEVIGDDSQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVEKFVL 158
Query: 123 IYDGNTTAASTYNVLDGISSFFNNLFSRNQPLTVPEFLQ--KVIE-TDVSYTFIKTSLTE 179
+ A+ +L+ + F NLF LT+ LQ K I+ + ++YT ++ +
Sbjct: 159 VSSILVNGAAMGQILNP-AYLFLNLFG----LTLVAKLQAEKYIKKSGINYTIVRPGGLK 213
Query: 180 DFSPESSYNVVVSAEASVDANDYKVAKSQIASLVADVFSNTAVAEN---KVVKVFTDPSA 236
+ P NVV+ E ++ Y+ + S+ LVA+V + E KVV++ A
Sbjct: 214 NDPPTG--NVVMEPEDTL----YEGSISR--DLVAEVAVEALLQEESSFKVVEIVARAEA 265
Query: 237 PARRVDELFSAI 248
P R +LF+++
Sbjct: 266 PKRSYKDLFASV 277
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.330 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 427 374 0.00087 117 3 10 23 0.47 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 598 (64 KB)
Total size of DFA: 258 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.34u 0.15s 43.49t Elapsed: 00:00:02
Total cpu time: 43.34u 0.16s 43.50t Elapsed: 00:00:02
Start: Fri May 10 16:29:17 2013 End: Fri May 10 16:29:19 2013